BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010603
(506 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%), Gaps = 6/152 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
HF LLK LG G G V+L D G L+AMKV+ K L R ++ R + ER+IL+ +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADV 87
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ +FY +E+ L L++
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLDH 145
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
LH +G++YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ SF GT EY+APE++ GH + DWW++G+ +E+L G PF+G +ET+ ++
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALI--RSTH 462
L P+ +S A+ L+R L ++P RLG GA EIK+H F+ +++W + R
Sbjct: 246 KLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 463 PPEIP 467
PP P
Sbjct: 304 PPFKP 308
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 99/152 (65%), Gaps = 6/152 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F LLK LG G G V+L + D L+AMKV+ K L R ++ R + ER+IL +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEV 83
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ +FY +E+ LAL++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDH 141
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
LH +G++YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ SF GT EY+APE++ GH + DWW+FG+ +E+L G PF+G +ET+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALI--RSTH 462
L P+ +S A+ L+R L ++P RLG G EIK+H FF +++W + R H
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 463 PPEIP 467
PP P
Sbjct: 300 PPFKP 304
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 99/152 (65%), Gaps = 6/152 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F LLK LG G G V+L + D L+AMKV+ K L R ++ R + ER+IL +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEV 84
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ +FY +E+ LAL++
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDH 142
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
LH +G++YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ SF GT EY+APE++ GH + DWW+FG+ +E+L G PF+G +ET+ ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALI--RSTH 462
L P+ +S A+ L+R L ++P RLG G EIK+H FF +++W + R H
Sbjct: 243 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 463 PPEIP 467
PP P
Sbjct: 301 PPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 99/152 (65%), Gaps = 6/152 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F LLK LG G G V+L + D L+AMKV+ K L R ++ R + ER+IL +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEV 83
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ +FY +E+ LAL++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDH 141
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
LH +G++YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ SF GT EY+APE++ GH + DWW+FG+ +E+L G PF+G +ET+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALI--RSTH 462
L P+ +S A+ L+R L ++P RLG G EIK+H FF +++W + R H
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 463 PPEIP 467
PP P
Sbjct: 300 PPFKP 304
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F++L+ LG G G V+L R G +AMKV+ K ++ K++ ER +LS++
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HPF+ ++ F+ + ++M++ GG+L +L ++ + F +FYA+EV LALEYL
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL 122
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
H ++YRDLKPEN+L+ ++GHI ++DF +
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT +Y+APE++ + ++DWW+FGI YE+L G TPF + +T ++ L+FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 412 GSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWA--LIRSTHPPEIPK 468
+ KDL+ L+ +D +RLG + G ++K HP+F+ V W L R+ P P
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP- 281
Query: 469 PVDLSFINHKQKTPIPQND--KGAADSDRSSGPFLDF 503
P+ + Q P+ D G D + F DF
Sbjct: 282 PIQQGQGDTSQFDKYPEEDINYGVQGEDPYADLFRDF 318
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 109/173 (63%), Gaps = 10/173 (5%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMR-AQTERE 163
+G+ +F LLK LG G G V+L D G L+AMKV+ K + + K +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 164 ILS-LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRFYASE 221
+L + PFL TL+ F+T+ L++++ +GG+L T L QR+ F+E + Y E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGE 167
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++LALE+LH +G++YRD+K EN+L+ +GH++L+DF LS + FV+ + ++ D
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS-KEFVADETERAYD 219
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 5/132 (3%)
Query: 344 SARSMSFVGTHEYLAPEIIRG--DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN 401
+ R+ F GT EY+AP+I+RG GH AVDWW+ G+ YELL G +PF +G + +
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273
Query: 402 VVGQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALI 458
+ + LK P +S AKDLI+ LL+KDP+KRLG R A EIK+H FF+ +NW +
Sbjct: 274 ISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDL 333
Query: 459 RSTHPPEIPKPV 470
+ P KPV
Sbjct: 334 AAKKVPAPFKPV 345
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G FAMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G FAMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G FAMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
LG+ +F ++ LG G G V LA +++ G L+A+KV+ K ++ + TE+ ILSL
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL L+ F+T +MEF +GGDL + Q + F E RFYA+E++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+LH G++YRDLK +NVL+ +GH L+DF +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP 406
+ +F GT +Y+APEI++ +G AVDWW G+ YE+L G PF+ + ++
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE 240
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKRLG--FKRGATEIKQHPFFESVNWALI--RSTH 462
+ +P + + A +++ + K+P RLG + G I +HPFF+ ++WA + R
Sbjct: 241 VVYP--TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIE 298
Query: 463 PPEIPK 468
PP P+
Sbjct: 299 PPFRPR 304
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 144
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ E G+I ++DF + R
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 175 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 235 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 292
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 293 YQRKVEAPFIPK 304
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 15/187 (8%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSC 289
H + ++YRDLKPEN+L+ + G+I ++DF + R R C P
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-------------KGRTWXLCGTPEY 204
Query: 290 IDPACKL 296
+ PA L
Sbjct: 205 LAPAIIL 211
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAP II G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 69 LSTGDANEASFRSACLSKPHKGNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVY 128
L A E FRS S +M+ V K K + + F LK LG G G V
Sbjct: 110 LKKQAAAEMDFRSGSPSDNSGAEEME---VSLAKPKH-RVTMNEFEYLKLLGKGTFGKVI 165
Query: 129 LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCL 188
L + + G +AMK++ K ++ + ++ TE +L HPFL L F+T C
Sbjct: 166 LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225
Query: 189 LMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLHM-MGVVYRDLKPENVL 245
+ME+ +GG+L H R+R FSE RFY +E++ AL+YLH VVYRDLK EN++
Sbjct: 226 VMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 281
Query: 246 VREDGHIMLSDFDL 259
+ +DGHI ++DF L
Sbjct: 282 LDKDGHIKITDFGL 295
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VV 403
A +F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELIL 362
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRL-GFKRGATEIKQHPFFESVNWALI--RS 460
+ ++FP ++ AK L+ GLL KDP++RL G A EI QH FF + W + +
Sbjct: 363 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKK 420
Query: 461 THPPEIPK 468
PP P+
Sbjct: 421 LSPPFKPQ 428
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT E LAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 69 LSTGDANEASFRSACLSKPHKGNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVY 128
L + E FRS S +M+ V K K + + F LK LG G G V
Sbjct: 113 LKKQEEEEMDFRSGSPSDNSGAEEME---VSLAKPKH-RVTMNEFEYLKLLGKGTFGKVI 168
Query: 129 LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCL 188
L + + G +AMK++ K ++ + ++ TE +L HPFL L F+T C
Sbjct: 169 LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 228
Query: 189 LMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLHM-MGVVYRDLKPENVL 245
+ME+ +GG+L H R+R FSE RFY +E++ AL+YLH VVYRDLK EN++
Sbjct: 229 VMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 284
Query: 246 VREDGHIMLSDFDL 259
+ +DGHI ++DF L
Sbjct: 285 LDKDGHIKITDFGL 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VV 403
A +F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELIL 365
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRL-GFKRGATEIKQHPFFESVNWALI--RS 460
+ ++FP ++ AK L+ GLL KDP++RL G A EI QH FF + W + +
Sbjct: 366 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKK 423
Query: 461 THPPEIPK 468
PP P+
Sbjct: 424 LSPPFKPQ 431
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ Y++ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D K G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
LGL F LL+ +G G V L L+ ++AM+V+ K ++ + + QTE+ +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL L+S F+T+ ++E+ +GGDL QRQ + E+ RFY++E+ LAL
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 166
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQ 286
YLH G++YRDLK +NVL+ +GHI L+D+ + + P S++C
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY----------GMCKEGLRPGDTTSTFCGT 216
Query: 287 PSCIDP 292
P+ I P
Sbjct: 217 PNYIAP 222
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET--------LF 400
+F GT Y+APEI+RG+ +G +VDWW G+ +E++ GR+PF G+ + LF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 401 NVV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF--KRGATEIKQHPFFESVNWAL 457
V+ + ++ P S+S A +++ L KDP++RLG + G +I+ HPFF +V+W +
Sbjct: 272 QVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329
Query: 458 IRSTH--PPEIPK 468
+ PP P
Sbjct: 330 MEQKQVVPPFKPN 342
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 249 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
LGL F LL+ +G G V L L+ ++AMKV+ K ++ + + QTE+ +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL L+S F+T+ ++E+ +GGDL QRQ + E+ RFY++E+ LAL
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 134
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQ 286
YLH G++YRDLK +NVL+ +GHI L+D+ + + P S +C
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY----------GMCKEGLRPGDTTSXFCGT 184
Query: 287 PSCIDP 292
P+ I P
Sbjct: 185 PNYIAP 190
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET--------LFN 401
F GT Y+APEI+RG+ +G +VDWW G+ +E++ GR+PF G+ + LF
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 402 VV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF--KRGATEIKQHPFFESVNWALI 458
V+ + ++ P S+S A +++ L KDP++RLG + G +I+ HPFF +V+W ++
Sbjct: 241 VILEKQIRIPR--SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
Query: 459 RSTH--PPEIP 467
PP P
Sbjct: 299 EQKQVVPPFKP 309
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +I H +F + +W I
Sbjct: 249 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAI 306
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 150
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 241 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 298
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 299 YQRKVEAPFIPK 310
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 249 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 268 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 326 IYQRKVEAPFIPK 338
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
LGL F LL+ +G G V L L+ ++AMKV+ K ++ + + QTE+ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL L+S F+T+ ++E+ +GGDL QRQ + E+ RFY++E+ LAL
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 123
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQ 286
YLH G++YRDLK +NVL+ +GHI L+D+ + + P S +C
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY----------GMCKEGLRPGDTTSXFCGT 173
Query: 287 PSCIDP 292
P+ I P
Sbjct: 174 PNYIAP 179
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET--------LFN 401
F GT Y+APEI+RG+ +G +VDWW G+ +E++ GR+PF G+ + LF
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 402 VV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF--KRGATEIKQHPFFESVNWALI 458
V+ + ++ P S+S A +++ L KDP++RLG + G +I+ HPFF +V+W ++
Sbjct: 230 VILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
Query: 459 RSTH--PPEIP 467
PP P
Sbjct: 288 EQKQVVPPFKP 298
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ + + GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 209 AKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 269 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
LGL F LL+ +G G V L L+ ++AMKV+ K ++ + + QTE+ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL L+S F+T+ ++E+ +GGDL QRQ + E+ RFY++E+ LAL
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQ 286
YLH G++YRDLK +NVL+ +GHI L+D+ + + P S +C
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY----------GMCKEGLRPGDTTSXFCGT 169
Query: 287 PSCIDP 292
P+ I P
Sbjct: 170 PNYIAP 175
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET--------LFN 401
F GT Y+APEI+RG+ +G +VDWW G+ +E++ GR+PF G+ + LF
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
Query: 402 VV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF--KRGATEIKQHPFFESVNWALI 458
V+ + ++ P S+S A +++ L KDP++RLG + G +I+ HPFF +V+W ++
Sbjct: 226 VILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
Query: 459 RSTH--PPEIP 467
PP P
Sbjct: 284 EQKQVVPPFKP 294
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
+ D + + F LK LG G G V L + G +AMK++ K ++ + ++ TE
Sbjct: 2 AMDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 61
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYAS 220
+L HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGA 117
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
E++ ALEYLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEEIR 228
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH----- 462
FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 229 FP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 286
Query: 463 PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 287 KPQVTSEVDTRYFD 300
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ F+E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FAEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + G +AMK++ K ++ + ++ TE +L
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +E++ ALE
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 122
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VV 403
A +F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELIL 221
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH 462
+ ++FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 222 MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 279
Query: 463 -----PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 280 LLPPFKPQVTSEVDTRYFD 298
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + G +AMK++ K ++ + ++ TE +L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +E++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VV 403
A +F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELIL 218
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH 462
+ ++FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 219 MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 463 -----PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 277 LLPPFKPQVTSEVDTRYFD 295
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + G +AMK++ K ++ + ++ TE +L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +E++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VV 403
A +F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELIL 218
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH 462
+ ++FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 219 MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 463 -----PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 277 LLPPFKPQVTSEVDTRYFD 295
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + G +AMK++ K ++ + ++ TE +L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +E++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEEIR 223
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH----- 462
FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 463 PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 282 KPQVTSEVDTRYFD 295
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + G +AMK++ K ++ + ++ TE +L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +E++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEEIR 223
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH----- 462
FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 463 PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 282 KPQVTSEVDTRYFD 295
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ + GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 189 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 249 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K +G G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GGD+ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + G +AMK++ K ++ + ++ TE +L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R F+E+ RFY +E++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEEIR 223
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRSTH----- 462
FP ++S AK L+ GLL KDP++RLG A E+ +H FF S+NW +
Sbjct: 224 FP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 463 PPEIPKPVDLSFIN 476
P++ VD + +
Sbjct: 282 KPQVTSEVDTRYFD 295
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 249 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K +G G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GGD+ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 143
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ + GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 174 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 234 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 291
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 292 YQRKVEAPFIPK 303
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 152
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 183 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 243 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 300
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 301 YQRKVEAPFIPK 312
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 150
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 241 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 298
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 299 YQRKVEAPFIPK 310
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + ++ G +AMK++DK + K++ E+ IL ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ +GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 178
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 269 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K +G G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
D + + F LK LG G G V L + + G +AMK++ K ++ + ++ TE +
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEV 222
L HPFL L F+T C +ME+ +GG+L H R+R FSE RFY +E+
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEI 119
Query: 223 LLALEYLHM-MGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ AL+YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 120 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEEIR 229
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRL-GFKRGATEIKQHPFFESVNWALI--RSTHPPE 465
FP ++ AK L+ GLL KDP++RL G A EI QH FF + W + + PP
Sbjct: 230 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 287
Query: 466 IPK 468
P+
Sbjct: 288 KPQ 290
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 249 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI 458
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W I
Sbjct: 248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 459 --RSTHPPEIPK 468
R P IPK
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + + G +AMK++ K ++ + ++ TE +L
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R FSE RFY +E++ AL+
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALD 123
Query: 228 YLHM-MGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEEIR 228
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRL-GFKRGATEIKQHPFFESVNWALI--RSTHPPE 465
FP ++ AK L+ GLL KDP++RL G A EI QH FF + W + + PP
Sbjct: 229 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 286
Query: 466 IPK 468
P+
Sbjct: 287 KPQ 289
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F LK LG G G V L + + G +AMK++ K ++ + ++ TE +L
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALE 227
HPFL L F+T C +ME+ +GG+L H R+R FSE RFY +E++ AL+
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALD 122
Query: 228 YLHM-MGVVYRDLKPENVLVREDGHIMLSDFDL 259
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN-VVGQPLK 408
F GT EYLAPE++ + +G AVDWW G+ YE++ GR PF N + E LF ++ + ++
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEEIR 227
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRL-GFKRGATEIKQHPFFESVNWALI--RSTHPPE 465
FP ++ AK L+ GLL KDP++RL G A EI QH FF + W + + PP
Sbjct: 228 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 285
Query: 466 IPK 468
P+
Sbjct: 286 KPQ 288
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F +K LG G G V L + + G +AMK++DK + K++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + ++ME+ GG++ + R+ G+ F E RFYA++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F ++ LG G G V L + ++ G +AMK++DK + K++ E+ I ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
PFL L F+ + +++E+ GG++ + R+ G+ FSE RFYA++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H + ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
A+ R+ GT EYLAPEII G+ AVDWW G+ YE+ G PF + +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWAL 457
+V ++FP S S KDL+R LL D KR G K G +IK H +F + +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 458 I--RSTHPPEIPK 468
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
V ++ D+ HF +L+ +G G G V + + D ++AMK M+K R ++
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E +I+ L+HPFL L+ F+ ++ ++++ GGDL Q HF E+ + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFIC 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
E+++AL+YL +++RD+KP+N+L+ E GH+ ++DF+++
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 342 PTSARSMSFVGTHEYLAPEII---RGDGHGSAVDWWTFGIFFYELLLGRTPF---KGNGN 395
P + + GT Y+APE+ +G G+ AVDWW+ G+ YELL GR P+ +
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 396 RETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW 455
+E + + +P S + L++ LL +P +R ++++ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYPSAWSQEMVS--LLKKLLEPNPDQRFS---QLSDVQNFPYMNDINW 280
Query: 456 ALI 458
+
Sbjct: 281 DAV 283
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREIL-SLLDHP 171
F LK +G G G V LA + +A+KV+ K + +K+ +ER +L + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
FL L+ F+T ++++ +GG+L QR+ + F E RFYA+E+ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS 157
Query: 232 MGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ +VYRDLKPEN+L+ GHI+L+DF L
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL 185
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++ + +F GT EYLAPE++ + VDWW G YE+L G PF E N++
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW-ALI--RS 460
+PL+ +I+ +A+ L+ GLL KD KRLG K EIK H FF +NW LI +
Sbjct: 253 NKPLQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKI 310
Query: 461 THP--PEIPKPVDLSFINHK-QKTPIPQNDKGAADS 493
T P P + P DL + + + P+P A DS
Sbjct: 311 TPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKAPDS 346
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 92/371 (24%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
+G F + LG G G V+ +++ G L+A K ++K L RK A E++IL+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDL----HTLRQRQPGKHFSEQATRFYASEVL 223
+ F+ +L FET CL+M +GGD+ + + + PG F E FY ++++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSY 283
LE+LH N++ R+ + P+ V DD RIS
Sbjct: 300 SGLEHLHQ----------RNIIYRD----------------LKPENVLLDDDGNVRISD- 332
Query: 284 CIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNXXXXXXXXXXXXXXNSDSLPVLIAEPT 343
L + VE Q
Sbjct: 333 ------------LGLAVELKAGQ------------------------------------- 343
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----NRETL 399
++ + GT ++APE++ G+ + +VD++ G+ YE++ R PF+ G N+E
Sbjct: 344 -TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATE-IKQHPFFESVNWALI 458
V+ Q + +P+ S A+KD LL KDP+KRLGF+ G+ + ++ HP F ++W +
Sbjct: 403 QRVLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 459 RS--THPPEIP 467
+ PP +P
Sbjct: 461 EAGMLTPPFVP 471
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 92/371 (24%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
+G F + LG G G V+ +++ G L+A K ++K L RK A E++IL+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDL----HTLRQRQPGKHFSEQATRFYASEVL 223
+ F+ +L FET CL+M +GGD+ + + + PG F E FY ++++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSY 283
LE+LH N++ R+ + P+ V DD RIS
Sbjct: 300 SGLEHLHQ----------RNIIYRD----------------LKPENVLLDDDGNVRISD- 332
Query: 284 CIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNXXXXXXXXXXXXXXNSDSLPVLIAEPT 343
L + VE Q
Sbjct: 333 ------------LGLAVELKAGQ------------------------------------- 343
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----NRETL 399
++ + GT ++APE++ G+ + +VD++ G+ YE++ R PF+ G N+E
Sbjct: 344 -TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATE-IKQHPFFESVNWALI 458
V+ Q + +P+ S A+KD LL KDP+KRLGF+ G+ + ++ HP F ++W +
Sbjct: 403 QRVLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 459 RS--THPPEIP 467
+ PP +P
Sbjct: 461 EAGMLTPPFVP 471
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 92/371 (24%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
+G F + LG G G V+ +++ G L+A K ++K L RK A E++IL+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDL----HTLRQRQPGKHFSEQATRFYASEVL 223
+ F+ +L FET CL+M +GGD+ + + + PG F E FY ++++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSY 283
LE+LH N++ R+ + P+ V DD RIS
Sbjct: 300 SGLEHLHQ----------RNIIYRD----------------LKPENVLLDDDGNVRISD- 332
Query: 284 CIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNXXXXXXXXXXXXXXNSDSLPVLIAEPT 343
L + VE Q
Sbjct: 333 ------------LGLAVELKAGQ------------------------------------- 343
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----NRETL 399
++ + GT ++APE++ G+ + +VD++ G+ YE++ R PF+ G N+E
Sbjct: 344 -TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATE-IKQHPFFESVNWALI 458
V+ Q + +P+ S A+KD LL KDP+KRLGF+ G+ + ++ HP F ++W +
Sbjct: 403 QRVLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 459 RS--THPPEIP 467
+ PP +P
Sbjct: 461 EAGMLTPPFVP 471
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANAFVGTAQY-VSPELLTE 206
Query: 291 DPACK 295
ACK
Sbjct: 207 KSACK 211
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ +FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 179 VLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 237
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 238 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 296 TWENLHQQTPPKL 308
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + F L K LG G G V+LAE + FA+K + K ++ + E+ +LSL
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 168 -LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL ++ F+T + +ME+ +GGDL + Q F FYA+E++L L
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
++LH G+VYRDLK +N+L+ +DGHI ++DF +
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 165
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 15/144 (10%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG 404
A++ F GT +Y+APEI+ G + +VDWW+FG+ YE+L+G++PF G E ++
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 233
Query: 405 QPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALI--RSTH 462
+P + AKDL+ L V++P+KRLG RG +I+QHP F +NW + +
Sbjct: 234 DNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV-RG--DIRQHPLFREINWEELERKEID 288
Query: 463 PPEIPK---PVDLS-----FINHK 478
PP PK P D S F+N K
Sbjct: 289 PPFRPKVKSPFDCSNFDKEFLNEK 312
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANSFVGTAQY-VSPELLTE 209
Query: 291 DPACK 295
ACK
Sbjct: 210 KSACK 214
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ SFVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 182 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 240
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 241 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 299 TWENLHQQTPPKL 311
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 208
Query: 291 DPACK 295
ACK
Sbjct: 209 KSACK 213
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 239
Query: 397 ETLF-NVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 240 GLIFAKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 209
Query: 291 DPACK 295
ACK
Sbjct: 210 KSACK 214
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 182 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 240
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 241 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 299 TWENLHQQTPPKL 311
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 208
Query: 291 DPACK 295
ACK
Sbjct: 209 KSACK 213
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 239
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 240 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 208
Query: 291 DPACK 295
ACK
Sbjct: 209 KSACK 213
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 239
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 240 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 206
Query: 291 DPACK 295
ACK
Sbjct: 207 KSACK 211
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 179 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 237
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 238 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 296 TWENLHQQTPPKL 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 206
Query: 291 DPACK 295
ACK
Sbjct: 207 KSACK 211
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 179 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 237
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 238 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 296 TWENLHQQTPPKL 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 211
Query: 291 DPACK 295
ACK
Sbjct: 212 KSACK 216
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 184 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 242
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FP ++ A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 243 YLIFQKIIKLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 301 TWENLHQQTPPKL 313
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 208
Query: 291 DPACK 295
ACK
Sbjct: 209 KSACK 213
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 239
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 240 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 233 GVVYRDLKPENVLVREDGHIMLSDF 257
G+++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA-GNE 239
Query: 397 ETLF-NVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 240 GLIFAKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 185
Query: 291 DPACK 295
ACK
Sbjct: 186 KSACK 190
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 158 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 216
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 217 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
Query: 454 NWALIRSTHPPE 465
W + PP+
Sbjct: 275 TWENLHQQTPPK 286
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANSFVGTAQY-VSPELLTE 205
Query: 291 DPACK 295
ACK
Sbjct: 206 KSACK 210
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ SFVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 178 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 236
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 237 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 295 TWENLHQQTPPKL 307
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 233 GVVYRDLKPENVLVREDGHIMLSDF 257
G+++RDLKPEN+L+ ED HI ++DF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 159 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 217
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 218 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 276 TWENLHQQTPPKL 288
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 190
Query: 291 DPACK 295
ACK
Sbjct: 191 KSACK 195
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 163 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 221
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 222 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 280 TWENLHQQTPPKL 292
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 183
Query: 291 DPACK 295
ACK
Sbjct: 184 KSACK 188
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 156 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 214
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 215 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 273 TWENLHQQTPPKL 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 184
Query: 291 DPACK 295
ACK
Sbjct: 185 KSACK 189
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 157 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 215
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 216 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 274 TWENLHQQTPPKL 286
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 205
Query: 291 DPACK 295
ACK
Sbjct: 206 KSACK 210
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 178 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 236
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 237 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 295 TWENLHQQTPPKL 307
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + F L K LG G G V+LAE + FA+K + K ++ + E+ +LSL
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 168 -LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+HPFL ++ F+T + +ME+ +GGDL + Q F FYA+E++L L
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
++LH G+VYRDLK +N+L+ +DGHI ++DF +
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 15/144 (10%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG 404
A++ F GT +Y+APEI+ G + +VDWW+FG+ YE+L+G++PF G E ++
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 405 QPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALI--RSTH 462
+P + AKDL+ L V++P+KRLG RG +I+QHP F +NW + +
Sbjct: 233 DNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV-RG--DIRQHPLFREINWEELERKEID 287
Query: 463 PPEIPK---PVDLS-----FINHK 478
PP PK P D S F+N K
Sbjct: 288 PPFRPKVKSPFDCSNFDKEFLNEK 311
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 213
Query: 291 DPACK 295
ACK
Sbjct: 214 KSACK 218
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 186 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 244
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 245 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 302
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 303 TWENLHQQTPPKL 315
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G + LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G+L L+ + F E TRFY +E++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI-- 290
G+++RDLKPEN+L+ ED HI ++DF + +SP+ Q+ + + Y + P +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTA--KVLSPESKQARANXFVGTAQY-VSPELLTE 206
Query: 291 DPACK 295
ACK
Sbjct: 207 KSACK 211
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ FVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 179 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNE 237
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 238 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 296 TWENLHQQTPPKL 308
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLA-GRKKLMRAQTEREILSLL 168
F LL+ LG G G V+ + G +FAMKV+ K M+ K + ER IL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HPF+ L F+T L++E+ SGG+L +R+ F E FY +E+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
LH G++YRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT EY+APEI+ GH AVDWW+ G Y++L G PF G ++T+ ++ L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRG-ATEIKQHPFFESVNWA--LIRSTHPPEI 466
P ++ A+DL++ LL ++ RLG G A E++ HPFF +NW L R PP
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 467 P 467
P
Sbjct: 299 P 299
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLA-GRKKLMRAQTEREILSLL 168
F LL+ LG G G V+ + G +FAMKV+ K M+ K + ER IL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HPF+ L F+T L++E+ SGG+L +R+ F E FY +E+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
LH G++YRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
+F GT EY+APEI+ GH AVDWW+ G Y++L G PF G ++T+ ++ L
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRG-ATEIKQHPFFESVNWA--LIRSTHPPE 465
P ++ A+DL++ LL ++ RLG G A E++ HPFF +NW L R PP
Sbjct: 240 LP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 466 IP 467
P
Sbjct: 298 KP 299
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F+ K LG G +V LA +A+K+++K + K+ ER+++S LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
LY F+ D+ + + G L L+ + F E TRFY +E++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 233 GVVYRDLKPENVLVREDGHIMLSDF 257
G+++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL E AR+ SFVGT +Y++PE++ + D W G Y+L+ G PF+ GN
Sbjct: 181 VLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA-GNE 239
Query: 397 ETLFN-VVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK--RGATEIKQHPFFESV 453
+F ++ FPE A+DL+ LLV D KRLG + G +K HPFFESV
Sbjct: 240 YLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 454 NWALIRSTHPPEI 466
W + PP++
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 159/371 (42%), Gaps = 92/371 (24%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
+G F + LG G G V+ +++ G L+A K ++K L RK A E++IL+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDL----HTLRQRQPGKHFSEQATRFYASEVL 223
+ F+ +L FET CL+M +GGD+ + + + PG F E FY ++++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSY 283
LE+ L N++ R+ + P+ V DD RIS
Sbjct: 300 SGLEH----------LHQRNIIYRD----------------LKPENVLLDDDGNVRISD- 332
Query: 284 CIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNXXXXXXXXXXXXXXNSDSLPVLIAEPT 343
L + VE Q
Sbjct: 333 ------------LGLAVELKAGQ------------------------------------- 343
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----NRETL 399
++ + GT ++APE++ G+ + +VD++ G+ YE++ R PF+ G N+E
Sbjct: 344 -TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATE-IKQHPFFESVNWALI 458
V+ Q + +P+ S A+KD LL KDP+KRLGF+ G+ + ++ HP F ++W +
Sbjct: 403 QRVLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 459 RS--THPPEIP 467
+ PP +P
Sbjct: 461 EAGMLTPPFVP 471
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 110/196 (56%), Gaps = 17/196 (8%)
Query: 93 MKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGR 152
++W V+ K+ L F +LK +G G V + +++ G ++AMK+M+K + R
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ + ER++L D ++ L+ F+ + + L+ME+ GGDL TL + G+
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIPA 161
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFD--LSLRC------- 263
+ RFY +E+++A++ +H +G V+RD+KP+N+L+ GHI L+DF L LR
Sbjct: 162 EMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL 221
Query: 264 -------FVSPKLVQS 272
++SP+++Q+
Sbjct: 222 VAVGTPDYLSPEILQA 237
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAV-------DWWTFGIFFYELLLGRTPFKGNGNR 396
+ RS+ VGT +YL+PEI++ G G DWW G+F YE+ G+TPF +
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 397 ETLFNVV--GQPLKFP-EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
ET +V + L P + A+D I+ LL P+ RLG + GA + + HPFF +
Sbjct: 277 ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGL 334
Query: 454 NWALIRSTHPPEIP 467
+W +R + PP P
Sbjct: 335 DWDGLRDSVPPFTP 348
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 93 MKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGR 152
++W K K L F +LK +G G G V + +L++ +FAMK+++K + R
Sbjct: 56 LEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR 115
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
+ + ER++L D ++ TL+ F+ D L+M++ GGDL TL + + E
Sbjct: 116 AETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPE 174
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQS 272
+ RFY +E+++A++ +H + V+RD+KP+N+L+ +GHI L+DF L+ + VQS
Sbjct: 175 EMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK-LMEDGTVQS 233
Query: 273 S 273
S
Sbjct: 234 S 234
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIR----GDG-HGSAVDWWTFGIFFYELLLGRTPFKGN 393
+ E + +S VGT +Y++PEI++ G G +G DWW+ G+ YE+L G TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 394 GNRETLFNVVGQPLKF---PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
ET ++ +F + + +S AKDLIR L+ + RLG + G + K+HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS-REHRLG-QNGIEDFKKHPFF 342
Query: 451 ESVNWALIRSTHPPEIPK---PVDLS 473
++W IR+ P IP+ P D S
Sbjct: 343 SGIDWDNIRNCEAPYIPEVSSPTDTS 368
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + F + + +G G G VY D G ++AMK +DK + ++ A ER +LSL
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 168 L---DHPFLPTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ D PF+ + F T DK S +++ +GGDLH Q G FSE RFYA+E++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 301
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK 268
L LE++H VVYRDLKP N+L+ E GH+ +S DL L C S K
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKK 344
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 17/128 (13%)
Query: 351 VGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG-------NRETLFNV 402
VGTH Y+APE++ +G + S+ DW++ G ++LL G +PF+ + +R TL
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI--R 459
V P S S + L+ GLL +D +RLG RGA E+K+ PFF S++W ++ +
Sbjct: 410 VELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 463
Query: 460 STHPPEIP 467
PP IP
Sbjct: 464 KYPPPLIP 471
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + F + + +G G G VY D G ++AMK +DK + ++ A ER +LSL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 168 L---DHPFLPTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ D PF+ + F T DK S +++ +GGDLH Q G FSE RFYA+E++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 302
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK 268
L LE++H VVYRDLKP N+L+ E GH+ +S DL L C S K
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKK 345
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 17/128 (13%)
Query: 351 VGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG-------NRETLFNV 402
VGTH Y+APE++ +G + S+ DW++ G ++LL G +PF+ + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI--R 459
V P S S + L+ GLL +D +RLG RGA E+K+ PFF S++W ++ +
Sbjct: 411 VELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 460 STHPPEIP 467
PP IP
Sbjct: 465 KYPPPLIP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + F + + +G G G VY D G ++AMK +DK + ++ A ER +LSL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 168 L---DHPFLPTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ D PF+ + F T DK S +++ +GGDLH Q G FSE RFYA+E++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 302
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK 268
L LE++H VVYRDLKP N+L+ E GH+ +S DL L C S K
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKK 345
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 17/128 (13%)
Query: 351 VGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG-------NRETLFNV 402
VGTH Y+APE++ +G + S+ DW++ G ++LL G +PF+ + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI--R 459
V P S S + L+ GLL +D +RLG RGA E+K+ PFF S++W ++ +
Sbjct: 411 VELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 460 STHPPEIP 467
PP IP
Sbjct: 465 KYPPPLIP 472
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + F + + +G G G VY D G ++AMK +DK + ++ A ER +LSL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 168 L---DHPFLPTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ D PF+ + F T DK S +++ +GGDLH Q G FSE RFYA+E++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 302
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK 268
L LE++H VVYRDLKP N+L+ E GH+ +S DL L C S K
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKK 345
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 17/128 (13%)
Query: 351 VGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG-------NRETLFNV 402
VGTH Y+APE++ +G + S+ DW++ G ++LL G +PF+ + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLG-FKRGATEIKQHPFFESVNWALI--R 459
V P S S + L+ GLL +D +RLG RGA E+K+ PFF S++W ++ +
Sbjct: 411 VELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 460 STHPPEIP 467
PP IP
Sbjct: 465 KYPPPLIP 472
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F L LG G G V LA+ + L+A+K++ K ++ + E+ +L+LLD
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 170 HP-FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
P FL L+S F+T +ME+ +GGDL Q Q GK F E FYA+E+ + L +
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGK-FKEPQAVFYAAEISIGLFF 135
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
LH G++YRDLK +NV++ +GHI ++DF +
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP 406
+ F GT +Y+APEII +G +VDWW +G+ YE+L G+ PF G E +++
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN 236
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKRLGF-KRGATEIKQHPFFESVNWALI--RSTHP 463
+ +P+ S+S A + +GL+ K P KRLG G ++++H FF ++W + R P
Sbjct: 237 VSYPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQP 294
Query: 464 PEIPK 468
P PK
Sbjct: 295 PFKPK 299
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
K +D + + ++K +G G G V L + ++AMK++ K + R E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
R+I++ + P++ L+ F+ D++ ++ME+ GGDL L E+ RFY +E
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAE 176
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
V+LAL+ +H MG ++RD+KP+N+L+ + GH+ L+DF
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 351 VGTHEYLAPEIIR---GDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ- 405
VGT +Y++PE+++ GDG+ G DWW+ G+F YE+L+G TPF + T ++
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWAL--IRSTH 462
L FP+ + IS AK+LI L D + RLG + G EIK+H FF++ WA +R T
Sbjct: 290 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 347
Query: 463 PPEIP 467
P +P
Sbjct: 348 APVVP 352
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
K +D + + ++K +G G G V L + ++AMK++ K + R E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
R+I++ + P++ L+ F+ D++ ++ME+ GGDL L E+ RFY +E
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAE 181
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
V+LAL+ +H MG ++RD+KP+N+L+ + GH+ L+DF
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 351 VGTHEYLAPEIIR---GDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ- 405
VGT +Y++PE+++ GDG+ G DWW+ G+F YE+L+G TPF + T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWAL--IRSTH 462
L FP+ + IS AK+LI L D + RLG + G EIK+H FF++ WA +R T
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 463 PPEIP 467
P +P
Sbjct: 353 APVVP 357
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
K +D + + ++K +G G G V L + ++AMK++ K + R E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
R+I++ + P++ L+ F+ D++ ++ME+ GGDL L E+ RFY +E
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAE 181
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
V+LAL+ +H MG ++RD+KP+N+L+ + GH+ L+DF
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 351 VGTHEYLAPEIIR---GDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ- 405
VGT +Y++PE+++ GDG+ G DWW+ G+F YE+L+G TPF + T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWAL--IRSTH 462
L FP+ + IS AK+LI L D + RLG + G EIK+H FF++ WA +R T
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 463 PPEIP 467
P +P
Sbjct: 353 APVVP 357
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++K +G G G V L + ++AMK++ K + R ER+I++ + P+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ F+ DK+ ++ME+ GGDL L E+ +FY +EV+LAL+ +H M
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM 193
Query: 233 GVVYRDLKPENVLVREDGHIMLSDF 257
G+++RD+KP+N+L+ + GH+ L+DF
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADF 218
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
Query: 351 VGTHEYLAPEIIR---GDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ- 405
VGT +Y++PE+++ GDG+ G DWW+ G+F +E+L+G TPF + T ++
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF--ESVNWALIRSTH 462
L FPE + IS AK+LI L D + RLG + G EIKQHPFF + NW IR T
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 463 PPEIPK 468
P +P+
Sbjct: 354 APVVPE 359
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 102/188 (54%), Gaps = 17/188 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F ++K +G G G V + ++++ ++AMK+++K + R + + ER++L D +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ F+ + L+M++ GGDL TL + K E RFY E++LA++ +H +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRC----------------FVSPKLVQSSDDP 276
V+RD+KP+NVL+ +GHI L+DF L+ ++SP+++Q+ +D
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 277 ACRISSYC 284
+ C
Sbjct: 271 MGKYGPEC 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 344 SARSMSFVGTHEYLAPEIIRG--DG---HGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+ +S VGT +Y++PEI++ DG +G DWW+ G+ YE+L G TPF ET
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
Query: 399 LFNVVG--QPLKFPEG-SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW 455
++ + +FP + +S AKDLI+ L+ ++RLG + G + K+H FFE +NW
Sbjct: 306 YGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICS-RERRLG-QNGIEDFKKHAFFEGLNW 363
Query: 456 ALIRSTHPPEIP 467
IR+ P IP
Sbjct: 364 ENIRNLEAPYIP 375
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 102/188 (54%), Gaps = 17/188 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F ++K +G G G V + ++++ ++AMK+++K + R + + ER++L D +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ F+ + L+M++ GGDL TL + K E RFY E++LA++ +H +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRC----------------FVSPKLVQSSDDP 276
V+RD+KP+NVL+ +GHI L+DF L+ ++SP+++Q+ +D
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 277 ACRISSYC 284
+ C
Sbjct: 255 MGKYGPEC 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 344 SARSMSFVGTHEYLAPEIIRG--DG---HGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+ +S VGT +Y++PEI++ DG +G DWW+ G+ YE+L G TPF ET
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 399 LFNVVG--QPLKFPEG-SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW 455
++ + +FP + +S AKDLI+ L+ ++RLG + G + K+H FFE +NW
Sbjct: 290 YGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICS-RERRLG-QNGIEDFKKHAFFEGLNW 347
Query: 456 ALIRSTHPPEIP 467
IR+ P IP
Sbjct: 348 ENIRNLEAPYIP 359
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT +Y+APEII +G +VDWW FG+ YE+L G+ PF+G E +++ + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGF-KRGATEIKQHPFFESVNWALI--RSTHPPEI 466
P+ S+S A + +GL+ K P KRLG G +IK+H FF ++W + + PP
Sbjct: 562 PK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 619
Query: 467 PK 468
PK
Sbjct: 620 PK 621
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
+ L F L LG G G V L+E + L+A+K++ K ++ + E+ +L+L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 168 LDHP-FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
P FL L+S F+T +ME+ +GGDL + Q F E FYA+E+ + L
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGL 455
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+L G++YRDLK +NV++ +GHI ++DF +
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT +Y+APEII +G +VDWW FG+ YE+L G+ PF+G E +++ + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALI--RSTHPPEI 466
P+ S+S A + +GL+ K P KRLG G +IK+H FF ++W + + PP
Sbjct: 241 PK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 298
Query: 467 PK 468
PK
Sbjct: 299 PK 300
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
+ L F L LG G G V L+E + L+A+K++ K ++ + E+ +L+L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 168 LDHP-FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
P FL L+S F+T +ME+ +GGDL + Q F E FYA+E+ + L
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGL 134
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+L G++YRDLK +NV++ +GHI ++DF +
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 142
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 186 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 246 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 286
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 142
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 186 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 246 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 100 CVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ 159
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E EI S L HP + LY +F L++E+ G+++ ++ Q F EQ T Y
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 100 CVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ 159
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E EI S L HP + LY +F L++E+ G+++ ++ Q F EQ T Y
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
+E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
FR + LG G G V ++R G ++A K ++K + RK A E++IL ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ +L +ET CL++ +GGDL H Q G F E FYA+E+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+VYRDLKPEN+L+ + GHI +SD L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF---KGNGNRETLFNVVGQPL 407
VGT Y+APE+++ + + + DWW G YE++ G++PF K RE + +V +
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-- 403
Query: 408 KFPEGSSISFA--AKDLIRGLLVKDPQKRLGFKRG-ATEIKQHPFFESVNWALIRS--TH 462
PE S F+ A+ L LL KDP +RLG + G A E+K+HP F+ +N+ + +
Sbjct: 404 -VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLE 462
Query: 463 PPEIPKP 469
PP P P
Sbjct: 463 PPFKPDP 469
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
FR + LG G G V ++R G ++A K ++K + RK A E++IL ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ +L +ET CL++ +GGDL H Q G F E FYA+E+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+VYRDLKPEN+L+ + GHI +SD L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF---KGNGNRETLFNVVGQPL 407
VGT Y+APE+++ + + + DWW G YE++ G++PF K RE + +V +
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-- 403
Query: 408 KFPEGSSISFA--AKDLIRGLLVKDPQKRLGFKRG-ATEIKQHPFFESVNWALIRS--TH 462
PE S F+ A+ L LL KDP +RLG + G A E+K+HP F+ +N+ + +
Sbjct: 404 -VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLE 462
Query: 463 PPEIPKP 469
PP P P
Sbjct: 463 PPFKPDP 469
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 100 CVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ 159
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYI 119
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 16 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 133
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 134 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 173
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 236
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 237 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 277
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 121
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 165 SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPXLR----EVLEHPWI 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYIT 118
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+G+++++K LG G G V LA G A+K+++K +LA K M+ + EREI L L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 69
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L HP + LY ++ +++E+ + QR SEQ R + +++ A+E
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 126
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y H +V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I G + G VD W+ G+ Y +L R PF N+ P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +S A LI+ +L+ +P R+ EI Q +F+
Sbjct: 233 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+G+++++K LG G G V LA G A+K+++K +LA K M+ + EREI L L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 70
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L HP + LY ++ +++E+ + QR SEQ R + +++ A+E
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 127
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y H +V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I G + G VD W+ G+ Y +L R PF N+ P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +S A LI+ +L+ +P R+ EI Q +F+
Sbjct: 234 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+G+++++K LG G G V LA G A+K+++K +LA K M+ + EREI L L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 60
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L HP + LY ++ +++E+ + QR SEQ R + +++ A+E
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y H +V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I G + G VD W+ G+ Y +L R PF N+ P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +S A LI+ +L+ +P R+ EI Q +F+
Sbjct: 224 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 118
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 158
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 162 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 222 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITEL 118
Query: 223 LLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 221 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITEL 118
Query: 223 LLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 221 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 261
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+G+++++K LG G G V LA G A+K+++K +LA K M+ + EREI L L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 64
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L HP + LY ++ +++E+ + QR SEQ R + +++ A+E
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 121
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y H +V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I G + G VD W+ G+ Y +L R PF N+ P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +S A LI+ +L+ +P R+ EI Q +F+
Sbjct: 228 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYIT 118
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITEL 122
Query: 223 LLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYIT 118
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 163 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 100 CVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ 159
C+ K D +G+ LG G VY AE G A+K++DK + + R Q
Sbjct: 5 CIGEKIEDFKVGNL-----LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ 59
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E +I L HP + LY++FE + L++E C G+++ + + K FSE R +
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFM 118
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ + YLH G+++RDL N+L+ + +I ++DF L+
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
+ + GT Y++PEI HG D W+ G FY LL+GR PF + + TL VV
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ P S +S AKDLI LL ++P RL + + HPF
Sbjct: 228 DYEMP--SFLSIEAKDLIHQLLRRNPADRLSL----SSVLDHPFM 266
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA ++ + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N ++T +
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+SK L F + + LG G G+VYLA + + A+KV+ K L + + E
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITE 118
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
+ AL Y H V++RD+KPEN+L+ G + +++F S+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV 158
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 162 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 222 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
++SK L F + + LG G G+VYLA + + A+KV+ K L + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E EI S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYIT 118
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
E+ AL Y H V++RD+KPEN+L+ G + +++F S+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHA 161
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
K L F + + LG G G+VYLA + + A+KV+ K L + + E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 164 ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
I S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELA 119
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
AL Y H V++RD+KPEN+L+ G + ++DF S
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
K L F + + LG G G+VYLA + + A+KV+ K L + + E E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 164 ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
I S L HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELA 118
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F + + LG G G+VYLA R + A+KV+ K L + + E EI S L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYC 128
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ +G + ++DF S+
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHA 162
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G PF+ + +ET +
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL + +RL E+ +HP+ ++
Sbjct: 224 RVEFTFPD--FVTEGARDLISRLLKHNASQRLTL----AEVLEHPWIKA 266
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G V LAE + L A+K + K L G++ M + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
+E+ L+M+ SGG+L R + G + A+R +VL A++YLH +G+V+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRD 141
Query: 239 LKPENVL---VREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
LKPEN+L + ED IM+SDF LS +DP +S+ C P + P
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS-----------KMEDPGSVLSTACGTPGYVAP 187
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+ +P S S + GT Y+APE++ + AVD W+ G+ Y LL G PF + +
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
Query: 399 LFNVVGQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA 456
++ +F P IS +AKD IR L+ KDP+KR ++ QHP+ + A
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG-DTA 281
Query: 457 LIRSTH 462
L ++ H
Sbjct: 282 LDKNIH 287
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L F + + LG G G+VYLA R + A+KV+ K L + + E EI S L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYC 128
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ +G + ++DF S+
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHA 162
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G PF+ + +ET +
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL + +RL E+ +HP+ ++
Sbjct: 224 RVEFTFPD--FVTEGARDLISRLLKHNASQRLTL----AEVLEHPWIKA 266
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTERE 163
DL +G++RLLK +G G+ V LA G A+K++DK L + +KL R E
Sbjct: 2 ADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVR 58
Query: 164 ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
I+ +L+HP + L+ ET+K L+ME+ SGG++ E +F +++
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF--RQIV 116
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 117 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ L+ +P KR
Sbjct: 224 RIP--FYMSTDCENLLKKFLILNPSKR 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F +++ LG G G+VYLA + + A+KV+ K L + + E EI S L HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ +Y++F K L++EF G+L+ ++ Q F EQ + + E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSL 261
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S R GT +YL PE+I G H VD W G+ YE L+G PF + ET +V
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
LKFP +S +KDLI LL P +RL K + +HP+ ++
Sbjct: 226 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK----GVMEHPWVKA 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTEREILSL 167
+G++RLLK +G G+ V LA G A+K++DK L +KL R E I+ +
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L+ ET+K L+ME+ SGG++ E ++F +++ A++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF--RQIVSAVQ 128
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL 269
Y H +V+RDLK EN+L+ D +I ++DF S V KL
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ LV +P KR
Sbjct: 232 RIP--FYMSTDCENLLKRFLVLNPIKR 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 163 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL 261
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
FP+ ++ A+DLI LL +P +R + E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G V LAE + L A+K + K L G++ M + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
+E+ L+M+ SGG+L R + G + A+R +VL A++YLH +G+V+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRD 141
Query: 239 LKPENVL---VREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
LKPEN+L + ED IM+SDF LS +DP +S+ C P + P
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS-----------KMEDPGSVLSTACGTPGYVAP 187
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+ +P S S + GT Y+APE++ + AVD W+ G+ Y LL G PF + +
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
Query: 399 LFNVVGQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA 456
++ +F P IS +AKD IR L+ KDP+KR ++ QHP+ + A
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG-DTA 281
Query: 457 LIRSTH 462
L ++ H
Sbjct: 282 LDKNIH 287
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTEREILSL 167
+G++RLLK +G G+ V LA G A+K++DK L +KL R E I+ +
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 67
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L+ ET+K L+ME+ SGG++ E ++F +++ A++
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF--RQIVSAVQ 125
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL 269
Y H +V+RDLK EN+L+ D +I ++DF S V KL
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 167
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ LV +P KR
Sbjct: 229 RIP--FYMSTDCENLLKRFLVLNPIKR 253
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 262
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G V LAE + L A+K + K L G++ M + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
+E+ L+M+ SGG+L R + G + A+R +VL A++YLH +G+V+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRD 141
Query: 239 LKPENVL---VREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
LKPEN+L + ED IM+SDF LS +DP +S+ C P + P
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS-----------KMEDPGSVLSTACGTPGYVAP 187
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+ +P S S + GT Y+APE++ + AVD W+ G+ Y LL G PF + +
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
Query: 399 LFNVVGQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA 456
++ +F P IS +AKD IR L+ KDP+KR ++ QHP+ + A
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG-DTA 281
Query: 457 LIRSTH 462
L ++ H
Sbjct: 282 LDKNIH 287
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 127
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 162
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 223
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 224 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 122
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 157
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 159 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 218
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 219 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 160 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
L F + + LG G G+VYLA + + A+KV+ K L + + E EI S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + LY +F L++E+ G ++ R+ Q F EQ T Y +E+ AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 120
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 155
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S+R + GT +YL PE+I G H VD W+ G+ YE L+G+ PF+ N +ET +
Sbjct: 157 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 216
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
FP+ ++ A+DLI LL +P +R + E+ +HP+ +
Sbjct: 217 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITA 259
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G V LAE + L A+K + K L G++ M + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
+E+ L+M+ SGG+L R + G + A+R +VL A++YLH +G+V+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRL-IFQVLDAVKYLHDLGIVHRD 141
Query: 239 LKPENVL---VREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
LKPEN+L + ED IM+SDF LS +DP +S+ C P + P
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS-----------KMEDPGSVLSTACGTPGYVAP 187
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET 398
+ +P S S + GT Y+APE++ + AVD W+ G+ Y LL G PF + +
Sbjct: 168 MEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
Query: 399 LFNVVGQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA 456
++ +F P IS +AKD IR L+ KDP+KR ++ QHP+ + A
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG-DTA 281
Query: 457 LIRSTH 462
L ++ H
Sbjct: 282 LDKNIH 287
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + LG G V LAE + G LFA+K + K L G++ + + E +L + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI--ENEIAVLRKIKHEN 81
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L +E+ L+M+ SGG+L R + G ++E+ +VL A+ YLH M
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFD-RIVEKG-FYTEKDASTLIRQVLDAVYYLHRM 139
Query: 233 GVVYRDLKPENVLVR---EDGHIMLSDFDLS 260
G+V+RDLKPEN+L E+ IM+SDF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF-- 409
GT Y+APE++ + AVD W+ G+ Y LL G PF + + ++ +F
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTH 462
P IS +AKD IR L+ KDP KR ++ A +HP+ + AL ++ H
Sbjct: 244 PYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG-DTALNKNIH 291
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + + LG G G+VYLA + + A+KV+ K L + + E EI S L HP
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ +Y++F K L++EF G+L+ ++ Q F EQ + + E+ AL Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSL 261
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSV 163
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S R GT +YL PE+I G H VD W G+ YE L+G PF + ET +V
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
LKFP +S +KDLI LL P +RL K + +HP+ ++
Sbjct: 227 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK----GVMEHPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + + LG G G+VYLA + + A+KV+ K L + + E EI S L HP
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ +Y++F K L++EF G+L+ ++ Q F EQ + + E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSL 261
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S R GT +YL PE+I G H VD W G+ YE L+G PF + ET +V
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
LKFP +S +KDLI LL P +RL K + +HP+ ++
Sbjct: 226 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK----GVMEHPWVKA 268
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQT 160
S D +G++RLLK +G G+ V LA G A+K++DK L + +KL R
Sbjct: 6 SADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR--- 62
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E I+ +L+HP + L+ ET+K L+ME+ SGG++ E+ R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFR 120
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ L+ +P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQT 160
S D +G++RLLK +G G+ V LA G A+K++DK L + +KL R
Sbjct: 6 SADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR--- 62
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E I+ +L+HP + L+ ET+K L+ME+ SGG++ E+ R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFR 120
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ L+ +P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQT 160
S D +G++RLLK +G G+ V LA G A+K++DK L + +KL R
Sbjct: 6 SADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR--- 62
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E I+ +L+HP + L+ ET+K L+ME+ SGG++ E+ R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFR 120
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ L+ +P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTEREILSL 167
+G++RL K +G G+ V LA G A+K++DK L +KL R E I+ +
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L+ ET+K L+ME+ SGG++ E+ R +++ A++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 128
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL 269
Y H +V+RDLK EN+L+ D +I ++DF S V KL
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL 170
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 408 KFP 410
+ P
Sbjct: 232 RIP 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQT 160
S D +G++RLLK +G G+ V LA G A++++DK L + +KL R
Sbjct: 6 SADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR--- 62
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E I+ +L+HP + L+ ET+K L+ME+ SGG++ E+ R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFR 120
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ L+ +P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQT 160
S D +G++RLLK +G G+ V LA G A++++DK L + +KL R
Sbjct: 6 SADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR--- 62
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E I+ +L+HP + L+ ET+K L+ME+ SGG++ E+ R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFR 120
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
F G+ Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P +S ++L++ L+ +P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
KD D L ++ L + +G G V LA G + A+K+MDK L L R +TE E
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIE 60
Query: 164 ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L L H + LY ET +++E+C GG+L Q SE+ TR +++
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIV 118
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
A+ Y+H G +RDLKPEN+L E + L DF L
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I+G + GS D W+ GI Y L+ G PF + N L+ + + K+
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF-DDDNVMALYKKIMRG-KYD 228
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE 465
+S ++ L++ +L DP+KR+ K + HP W + +P E
Sbjct: 229 VPKWLSPSSILLLQQMLQVDPKKRISMK----NLLNHP------WIMQDYNYPVE 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQT 160
S D +G++RLLK +G G+ V LA G A+K++DK L + +KL R
Sbjct: 6 SADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR--- 62
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
E I +L+HP + L+ ET+K L+ E+ SGG++ E +F
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF--R 120
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F G Y APE+ +G + G VD W+ G+ Y L+ G PF G +E V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P S ++L++ L+ +P KR
Sbjct: 231 RIPFYXSTD--CENLLKKFLILNPSKR 255
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++ +KKLG G G V L + + G A+K++ K + E +L LDHP
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLH---TLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+ LY FE + L+ME GG+L LRQ+ FSE +VL YL
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 120
Query: 230 HMMGVVYRDLKPENVLVR---EDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQ 286
H +V+RDLKPEN+L+ D I + DF LS V K+ + ++Y I
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG------TAYYIA 174
Query: 287 PSCI----DPACKLPVC 299
P + D C + C
Sbjct: 175 PEVLRKKYDEKCDVWSC 191
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++R + D W+ G+ Y LL G PF G ++E L V F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ + +S AK L++ +L +P KR+ A E HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHPWI 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
DG + +GH+ L LG G G V + E + G A+K++++ + + + + E +
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
L L HP + LY T ++ME+ SGG+L + G+ +A R + ++L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLF-QQILS 122
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A++Y H VV+RDLKPENVL+ + ++DF LS
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-GQPLKF 409
G+ Y APE+I G + G VD W+ G+ Y LL G PF + + TLF + G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIRGGVFYI 230
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
PE + S A L+ +L DP KR K +I++H +F+
Sbjct: 231 PEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFKQ 267
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ +LG G G VY A+ ++ L A KV+D ++L E +IL+ DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPN 95
Query: 173 LPTLYSHFETDKFSCLLMEFCSGG--DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ L F + +L+EFC+GG D L +P +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLSLR 262
+++RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 346 RSMSFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF 400
R SF+GT ++APE++ + + D W+ GI E+ P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 401 NVV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
+ +P + S S KD ++ L +K + + +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ +LG G G VY A+ ++ L A KV+D ++L E +IL+ DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPN 95
Query: 173 LPTLYSHFETDKFSCLLMEFCSGG--DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ L F + +L+EFC+GG D L +P +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLSLR 262
+++RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 343 TSARSMSFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
T R SF+GT ++APE++ + + D W+ GI E+ P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 398 TLFNVV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
L + +P + S S KD ++ L +K + + +++ QHPF
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 296
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
DG + +GH+ L LG G G V + E + G A+K++++ + + + + E +
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
L L HP + LY T ++ME+ SGG+L + G+ +A R + ++L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLF-QQILS 122
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A++Y H VV+RDLKPENVL+ + ++DF LS
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-GQPLKF 409
G+ Y APE+I G + G VD W+ G+ Y LL G PF + + TLF + G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIRGGVFYI 230
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
PE + S A L+ +L DP KR K +I++H +F+
Sbjct: 231 PEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFKQ 267
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ +LG G G VY A+ ++ L A KV+D ++L E +IL+ DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPN 95
Query: 173 LPTLYSHFETDKFSCLLMEFCSGG--DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ L F + +L+EFC+GG D L +P +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLSLR 262
+++RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 346 RSMSFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF 400
R F+GT ++APE++ + + D W+ GI E+ P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 401 NVV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
+ +P + S S KD ++ L +K + + +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 296
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++ +KKLG G G V L + + G A+K++ K + E +L LDHP
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLH---TLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+ LY FE + L+ME GG+L LRQ+ FSE +VL YL
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 137
Query: 230 HMMGVVYRDLKPENVLVR---EDGHIMLSDFDLSLR--------------CFVSPKLVQS 272
H +V+RDLKPEN+L+ D I + DF LS +++P++++
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 273 SDDPACRISS 282
D C + S
Sbjct: 198 KYDEKCDVWS 207
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++R + D W+ G+ Y LL G PF G ++E L V F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ + +S AK L++ +L +P KR+ A E HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHPWI 280
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F ++ LG G V+L + R G LFA+K + K L + E +L + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSL---ENEIAVLKKIKHEN 67
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ TL +E+ L+M+ SGG+L R + G ++E+ +VL A++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFD-RILERGV-YTEKDASLVIQQVLSAVKYLHEN 125
Query: 233 GVVYRDLKPENVLV---REDGHIMLSDFDLS 260
G+V+RDLKPEN+L E+ IM++DF LS
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF-- 409
GT Y+APE++ + AVD W+ G+ Y LL G PF + + +F
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFES 228
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHP 463
P IS +AKD I LL KDP +R ++ + HP+ + N AL R +P
Sbjct: 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S R + GT +YL PE+I G H VD W G+ YELL+G PF+ + ET +V
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
LKFP +S+ A+DLI LL +P +RL ++ HP+ +
Sbjct: 235 KVDLKFP--ASVPTGAQDLISKLLRHNPSERLPL----AQVSAHPWVRA 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + + LG G G+VYLA + + A+KV+ K + + + E EI + L HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ LY++F + L++E+ G+L+ ++ Q F EQ T E+ AL Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSL 261
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSV 171
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
+ DG + +GH+ L LG G G V + + G A+K++++ + + + + E
Sbjct: 7 QKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE 66
Query: 162 REILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
+ L L HP + LY T ++ME+ SGG+L + E+ +R +
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQ 124
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+L ++Y H VV+RDLKPENVL+ + ++DF LS
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I G + G VD W+ G+ Y LL G PF + + TLF + + F
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGI-FY 234
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
++ + L++ +L DP KR K +I++H +F+
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKRATIK----DIREHEWFKQ 272
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ +LG G G VY A+ ++ G L A KV++ ++L E EIL+ DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET---KSEEELEDYIVEIEILATCDHPY 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L + D +++EFC GG + + + + +E + ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLR 262
+++RDLK NVL+ +G I L+DF +S +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 349 SFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
SF+GT ++APE++ + + D W+ GI E+ P L +
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 227
Query: 404 -GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
P S S +D ++ L K+P+ R A ++ +HPF S+
Sbjct: 228 KSDPPTLLTPSKWSVEFRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 122 GDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFE 181
GD G VY A+ ++ L A KV+D ++L E +IL+ DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 182 TDKFSCLLMEFCSGG--DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDL 239
+ +L+EFC+GG D L +P +E + + L AL YLH +++RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 240 KPENVLVREDGHIMLSDFDLSLR 262
K N+L DG I L+DF +S +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK 157
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 346 RSMSFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF 400
R SF+GT ++APE++ + + D W+ GI E+ P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 401 NVV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
+ +P + S S KD ++ L +K + + +++ QHPF
Sbjct: 225 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 270
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ +LG G G VY A+ ++ G L A KV++ ++L E EIL+ DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET---KSEEELEDYIVEIEILATCDHPY 77
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L + D +++EFC GG + + + + +E + ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLR 262
+++RDLK NVL+ +G I L+DF +S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 14/114 (12%)
Query: 349 SFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
SF+GT ++APE++ + + D W+ GI E+ P L +
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 235
Query: 404 GQ---PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
L P S+ F +D ++ L K+P+ R A ++ +HPF S+
Sbjct: 236 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA---GRKK--LMRAQTEREILS 166
+ + K LG G G V LA R A+K++ K A R+ + +TE EIL
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + + + F+ + + +++E GG+L + K E + Y ++LLA+
Sbjct: 71 KLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 227 EYLHMMGVVYRDLKPENVLV---REDGHIMLSDF 257
+YLH G+++RDLKPENVL+ ED I ++DF
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 349 SFVGTHEYLAPEI---IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-- 403
+ GT YLAPE+ + G+ AVD W+ G+ + L G PF + + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 404 GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA---GRKK--LMRAQTEREILS 166
+ + K LG G G V LA R A+K++ K A R+ + +TE EIL
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + + + F+ + + +++E GG+L + K E + Y ++LLA+
Sbjct: 70 KLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAV 126
Query: 227 EYLHMMGVVYRDLKPENVLV---REDGHIMLSDF 257
+YLH G+++RDLKPENVL+ ED I ++DF
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 349 SFVGTHEYLAPEI---IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-- 403
+ GT YLAPE+ + G+ AVD W+ G+ + L G PF + + +L + +
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 404 GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA---GRKK--LMRAQTEREILS 166
+ + K LG G G V LA R A+K++ K A R+ + +TE EIL
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + + + F+ + + +++E GG+L + K E + Y ++LLA+
Sbjct: 71 KLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 227 EYLHMMGVVYRDLKPENVLV---REDGHIMLSDF 257
+YLH G+++RDLKPENVL+ ED I ++DF
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 349 SFVGTHEYLAPEI---IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-- 403
+ GT YLAPE+ + G+ AVD W+ G+ + L G PF + + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 404 GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA---GRKK--LMRAQTEREILS 166
+ + K LG G G V LA R A+K++ K A R+ + +TE EIL
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + + + F+ + + +++E GG+L + K E + Y ++LLA+
Sbjct: 71 KLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 227 EYLHMMGVVYRDLKPENVLV---REDGHIMLSDF 257
+YLH G+++RDLKPENVL+ ED I ++DF
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 349 SFVGTHEYLAPEI---IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-- 403
+ GT YLAPE+ + G+ AVD W+ G+ + L G PF + + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 404 GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 279
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
+GT EYLAPEI+ D +A D W GI Y LL +PF G N+ET N+ + +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 410 PEG--SSISFAAKDLIRGLLVKDPQKR 434
E SS+S A D I+ LLVK+P+KR
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL---LDHPFL 173
K+LG G V + G +A K + K R + RA+ EI L P +
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKK---RRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
L+ +E L++E+ +GG++ +L + + SE ++L + YLH
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 234 VVYRDLKPENVLVRED---GHIMLSDFDLS 260
+V+ DLKP+N+L+ G I + DF +S
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA-GRKK----LMRAQTEREILS 166
+ + K LG G G V LA R A+K++ K A G + + +TE EIL
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + + + F+ + + +++E GG+L + K E + Y ++LLA+
Sbjct: 77 KLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAV 133
Query: 227 EYLHMMGVVYRDLKPENVLV---REDGHIMLSDF 257
+YLH G+++RDLKPENVL+ ED I ++DF
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 349 SFVGTHEYLAPEI---IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-- 403
+ GT YLAPE+ + G+ AVD W+ G+ + L G PF + + +L + +
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 240
Query: 404 GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 241 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 285
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK----------------------- 146
L + L ++G G G V LA + +AMKV+ K
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 147 GMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLM--EFCSGGDLHTLRQR 204
G + R + + E IL LDHP + L + L M E + G + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 205 QPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+P SE RFY +++ +EYLH +++RD+KP N+LV EDGHI ++DF +S
Sbjct: 132 KP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 351 VGTHEYLAPEII---RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
VGT ++APE + R G A+D W G+ Y + G+ PF + Q L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
+FP+ I+ KDLI +L K+P+ R+ EIK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRI----VVPEIKLHPW 295
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA-GRKK----LMRAQTEREILS 166
+ + K LG G G V LA R A++++ K A G + + +TE EIL
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + + + F+ + + +++E GG+L + K E + Y ++LLA+
Sbjct: 196 KLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAV 252
Query: 227 EYLHMMGVVYRDLKPENVLV---REDGHIMLSDF 257
+YLH G+++RDLKPENVL+ ED I ++DF
Sbjct: 253 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 338 LIAEPTSARSMSFVGTHEYLAPEI---IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG 394
++ E + R++ GT YLAPE+ + G+ AVD W+ G+ + L G PF +
Sbjct: 291 ILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
Query: 395 NRETLFNVV--GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +L + + G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 349 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 404
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA-GRKK----LMRAQTEREILSLLDHP 171
K LG G G V LA R A++++ K A G + + +TE EIL L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
+ + + F+ + + +++E GG+L + K E + Y ++LLA++YLH
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 232 MGVVYRDLKPENVLV---REDGHIMLSDF 257
G+++RDLKPENVL+ ED I ++DF
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 338 LIAEPTSARSMSFVGTHEYLAPEIIRG---DGHGSAVDWWTFGIFFYELLLGRTPFKGNG 394
++ E + R++ GT YLAPE++ G+ AVD W+ G+ + L G PF +
Sbjct: 305 ILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
Query: 395 NRETLFNVV--GQPLKFPE-GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +L + + G+ PE + +S A DL++ LLV DP+ R E +HP+ +
Sbjct: 363 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 418
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 133
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 133
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEF-LKQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEF-LKQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L+ E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+G + + + LG G G V LA A+K + + +L MR + E L LL
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HP + LY T +++E+ G + ++ K +E R + +++ A+EY
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYC 124
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
H +V+RDLKPEN+L+ ++ ++ ++DF LS
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 352 GTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
G+ Y APE+I G + G VD W+ GI Y +L+GR PF + LF V + +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKVNSCV-YV 226
Query: 411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+S A+ LIR ++V DP +R+ + EI++ P+F
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWF 262
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F +KLG G G V+L E R G +K ++K + + + + E E+L LDHP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD--RSQVPMEQIEAEIEVLKSLDHPN 81
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ ++ FE ++ME C GG+L + + GK SE +++ AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 231 MMGVVYRDLKPENVLVREDG-H--IMLSDFDLS 260
VV++DLKPEN+L ++ H I + DF L+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV-GQ 405
S + GT Y+APE+ + D D W+ G+ Y LL G PF G E +
Sbjct: 183 STNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE 241
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
P E ++ A DL++ +L KDP++R A ++ H +F+
Sbjct: 242 PNYAVECRPLTPQAVDLLKQMLTKDPERR----PSAAQVLHHEWFKQ 284
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM-----DKGMLAGRKKL 155
V+ K+G +G +F++ +KLG G G V L + ++ A+KV+ DKG + K
Sbjct: 27 VRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 156 MRA-----QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHF 210
+ E +L LDHP + L+ FE K+ L+ EF GG+L Q F
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKF 143
Query: 211 SEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDG---HIMLSDFDLS------- 260
E ++L + YLH +V+RD+KPEN+L+ +I + DF LS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 261 -LR------CFVSPKLVQSSDDPACRISS 282
LR +++P++++ + C + S
Sbjct: 204 KLRDRLGTAYYIAPEVLKKKYNEKCDVWS 232
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP--LK 408
+GT Y+APE+++ + D W+ G+ Y LL G PF G +++ + V
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKR 434
F + +IS AK+LI+ +L D KR
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDHPFL 173
L+K+G G G L + + G + +K ++ ++ ++ R ++ RE+ L+ + HP +
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE---REESRREVAVLANMKHPNI 85
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
FE + ++M++C GGDL Q G F E + ++ LAL+++H
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLS 260
+++RD+K +N+ + +DG + L DF ++
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
+GT YL+PEI + + D W G YEL + F+ + + ++ P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 411 EGSSISFAAKDLIRGLLVKDPQKR 434
S+ + L+ L ++P+ R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 35/209 (16%)
Query: 101 VKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLA--GRKKLMRA 158
+ SK G L + R+ KKLG G G V L + A+K++ K ++ KL+
Sbjct: 28 ITSKKGHLSEMYQRV-KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE- 85
Query: 159 QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDL-----HTLRQRQPGKHFSEQ 213
E +L LLDHP + LY FE + L+ME GG+L H ++ F+E
Sbjct: 86 --EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-------FNEV 136
Query: 214 ATRFYASEVLLALEYLHMMGVVYRDLKPENVLV---REDGHIMLSDFDLS---------- 260
+VL + YLH +V+RDLKPEN+L+ +D I + DF LS
Sbjct: 137 DAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196
Query: 261 ----LRCFVSPKLVQSSDDPACRISSYCI 285
+++P++++ D C + S +
Sbjct: 197 ERLGTAYYIAPEVLRKKYDEKCDVWSIGV 225
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++R + D W+ G+ + LL G PF G ++E L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
PE ++S AKDLI+ +L D Q+R+ A + +HP+ + +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRI----SAQQALEHPWIKEM 298
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT ++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL NV +F +
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
S+ S AKD IR LLVKDP+KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K + R+ + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E +GG+L + E+AT F ++L + YLH +
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFL-KQILNGVYYLHSLQ 134
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLSLR--------------CFVSPKLV 270
+ + DLKPEN+++ + I + DF L+ + FV+P++V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV 189
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH 170
G F L++ +G G G VY G L A+KVMD + G ++ Q + H
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHH 80
Query: 171 PFLPTLYSHF------ETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ T Y F D L+MEFC G + L + G E+ + E+L
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +LH V++RD+K +NVL+ E+ + L DF +S
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAV-----DWWTFGIFFYELLLGRTPFKGNGNRE 397
T R +F+GT ++APE+I D + A D W+ GI E+ G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
Query: 398 TLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATE-IKQHPFF 450
LF + P + S + I LVK+ +R ATE + +HPF
Sbjct: 242 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHS-----QRPATEQLMKHPFI 290
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN--WALIR 459
S S AKD IR LLVK+ +KRL + E +HP+ V+ A++R
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDTQQAMVR 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K A R+ + R + ERE IL + HP +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E SGG+L ++ SE+ + ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLS 260
+ + DLKPEN+++ + HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V L + + G A+KV+ K + + E ++L LDHP + LY
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + L+ E +GG+L + K FSE +VL + Y+H +V+RD
Sbjct: 100 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 157
Query: 239 LKPENVLVR---EDGHIMLSDFDLSLR--------------CFVSPKLVQSSDDPACRIS 281
LKPEN+L+ +D +I + DF LS +++P+++ + D C +
Sbjct: 158 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVW 217
Query: 282 S 282
S
Sbjct: 218 S 218
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++ G + D W+ G+ Y LL G PF G + L V F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRL 435
P+ +S +AKDLIR +L P R+
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRI 280
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V L + + G A+KV+ K + + E ++L LDHP + LY
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + L+ E +GG+L + K FSE +VL + Y+H +V+RD
Sbjct: 118 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 175
Query: 239 LKPENVLVR---EDGHIMLSDFDLSLR--------------CFVSPKLVQSSDDPACRIS 281
LKPEN+L+ +D +I + DF LS +++P+++ + D C +
Sbjct: 176 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVW 235
Query: 282 SYCIQPSCIDPAC 294
S + + C
Sbjct: 236 STGVILYILLSGC 248
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++ G + D W+ G+ Y LL G PF G + L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRL 435
P+ +S +AKDLIR +L P R+
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRI 298
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V L + + G A+KV+ K + + E ++L LDHP + LY
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + L+ E +GG+L + K FSE +VL + Y+H +V+RD
Sbjct: 117 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 174
Query: 239 LKPENVLVR---EDGHIMLSDFDLSLR--------------CFVSPKLVQSSDDPACRIS 281
LKPEN+L+ +D +I + DF LS +++P+++ + D C +
Sbjct: 175 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVW 234
Query: 282 SYCIQPSCIDPAC 294
S + + C
Sbjct: 235 STGVILYILLSGC 247
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++ G + D W+ G+ Y LL G PF G + L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRL 435
P+ +S +AKDLIR +L P R+
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRI 297
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V L + + G A+KV+ K + + E ++L LDHP + LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + L+ E +GG+L + K FSE +VL + Y H +V+RD
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRD 151
Query: 239 LKPENVLVR---EDGHIMLSDFDLSLR--------------CFVSPKLVQSSDDPACRIS 281
LKPEN+L+ +D +I + DF LS +++P+++ + D C +
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVW 211
Query: 282 S 282
S
Sbjct: 212 S 212
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
S + +GT Y+APE++ G + D W+ G+ Y LL G PF G + L V
Sbjct: 182 SKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 240
Query: 404 GQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRL 435
F P+ +S +AKDLIR L P R+
Sbjct: 241 KGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRI 274
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V L + + G A+KV+ K + + E ++L LDHP + LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + L+ E +GG+L + K FSE +VL + Y+H +V+RD
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 151
Query: 239 LKPENVLVR---EDGHIMLSDFDLSLR--------------CFVSPKLVQSSDDPACRIS 281
LKPEN+L+ +D +I + DF LS +++P+++ + D C +
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVW 211
Query: 282 SYCIQPSCIDPAC 294
S + + C
Sbjct: 212 STGVILYILLSGC 224
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++ G + D W+ G+ Y LL G PF G + L V F
Sbjct: 189 IGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRL 435
P+ +S +AKDLIR +L P R+
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRI 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN--WALIR 459
S S AKD IR LLVK+ +KRL + E +HP+ V+ A++R
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K A R+ + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E SGG+L ++ SE+ + ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLS 260
+ + DLKPEN+++ + HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN--WALIR 459
S S AKD IR LLVK+ +KRL + E +HP+ V+ A++R
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K A R+ + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E SGG+L ++ SE+ + ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLS 260
+ + DLKPEN+++ + HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN--WALIR 459
S S AKD IR LLVK+ +KRL + E +HP+ V+ A++R
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K A R+ + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
TL+ +E L++E SGG+L L Q++ SE+ + ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 233 GVVYRDLKPENVLVREDG----HIMLSDFDLS 260
+ + DLKPEN+++ + HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN--WALIR 459
S S AKD IR LLVK+ +KRL + E +HP+ V+ A++R
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K A R+ + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
TL+ +E L++E SGG+L L Q++ SE+ + ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 233 GVVYRDLKPENVLVREDG----HIMLSDFDLS 260
+ + DLKPEN+++ + HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S GD+ ++ L +G G G V +A + A K + K + + + R + E
Sbjct: 19 STKGDIN-QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 74
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
EI+ LDHP + LY FE + L+ME C+GG+L + + F E +V
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDV 132
Query: 223 LLALEYLHMMGVVYRDLKPENVLV---REDGHIMLSDFDLSLR--------------CFV 265
L A+ Y H + V +RDLKPEN L D + L DF L+ R +V
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 192
Query: 266 SPKLVQSSDDPAC 278
SP++++ P C
Sbjct: 193 SPQVLEGLYGPEC 205
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
VGT Y++P+++ G +G D W+ G+ Y LL G PF + E + + FP
Sbjct: 186 VGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 411 EGS--SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
E ++S A+ LIR LL K P++R+ + + +H +FE
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRI----TSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S GD+ ++ L +G G G V +A + A K + K + + + R + E
Sbjct: 2 STKGDIN-QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 57
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
EI+ LDHP + LY FE + L+ME C+GG+L + + F E +V
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDV 115
Query: 223 LLALEYLHMMGVVYRDLKPENVLV---REDGHIMLSDFDLSLR--------------CFV 265
L A+ Y H + V +RDLKPEN L D + L DF L+ R +V
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175
Query: 266 SPKLVQSSDDPAC 278
SP++++ P C
Sbjct: 176 SPQVLEGLYGPEC 188
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
VGT Y++P+++ G +G D W+ G+ Y LL G PF + E + + FP
Sbjct: 169 VGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 411 EGS--SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
E ++S A+ LIR LL K P++R+ + + +H +FE
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRI----TSLQALEHEWFE 266
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G+ +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN--WALIR 459
S S AKD IR LLVK+ +KRL + E +HP+ V+ A++R
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTERE--ILSLLDHPFL 173
++LG G V + G +A K + K A R+ + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
TL+ +E L++E SGG+L ++ SE+ + ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 234 VVYRDLKPENVLVREDG----HIMLSDFDLS 260
+ + DLKPEN+++ + HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G Y D +FA KV+ K ML + + TE I LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE D F +++E C L L +R+ K +E R++ + + ++YLH V++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 239 LKPENVLVREDGHIMLSDFDLSLR 262
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P I+ A LIR +L DP R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G Y D +FA KV+ K ML + + TE I LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE D F +++E C L L +R+ K +E R++ + + ++YLH V++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 239 LKPENVLVREDGHIMLSDFDLSLR 262
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P I+ A LIR +L DP R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G Y D +FA KV+ K ML + + TE I LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE D F +++E C L L +R+ K +E R++ + + ++YLH V++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 239 LKPENVLVREDGHIMLSDFDLSLR 262
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P I+ A LIR +L DP R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G +ETL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRL 435
S+ S AKD IR LLVKDP++R+
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAG-RKKLMRAQTERE--ILSLL 168
H+ + ++LG G V + G +A K + K L+ R+ + R + ERE IL +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + TL+ FE L++E SGG+L + ++AT+F ++L + Y
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT-EDEATQFL-KQILDGVHY 130
Query: 229 LHMMGVVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
LH + + DLKPEN+++ + I L DF ++ + FV+P++V
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190
Query: 271 Q 271
Sbjct: 191 N 191
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F +L+KLG G GSVY A ++ G + A+K + L E I+ D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCDSPH 85
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y + + ++ME+C G + + R K +E L LEYLH M
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K N+L+ +GH L+DF ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG 404
A+ +GT ++APE+I+ G+ D W+ GI E+ G+ P+ +F +
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 405 QP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
P + PE S +F D ++ LVK P++R AT++ QHPF S
Sbjct: 240 NPPPTFRKPELWSDNFT--DFVKQCLVKSPEQRA----TATQLLQHPFVRS 284
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G +ETL N+ F E
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRL 435
S+ S AKD IR LLVKDP++R+
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRM 258
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAG-RKKLMRAQTERE--ILSLL 168
H+ + ++LG G V + G +A K + K L+ R+ + R + ERE IL +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + TL+ FE L++E SGG+L + ++AT+F ++L + Y
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT-EDEATQFL-KQILDGVHY 123
Query: 229 LHMMGVVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
LH + + DLKPEN+++ + I L DF ++ + FV+P++V
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 271 Q 271
Sbjct: 184 N 184
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G Y D +FA KV+ K ML + + TE I LD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE D F +++E C L L +R+ K +E R++ + + ++YLH V++RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 239 LKPENVLVREDGHIMLSDFDLSLR 262
LK N+ + +D + + DF L+ +
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATK 175
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P I+ A LIR +L DP R
Sbjct: 242 EYSVPR--HINPVASALIRRMLHADPTLR 268
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE 411
GT E++APEI+ + G D W+ G+ Y LL G +PF G +ETL N+ F E
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 412 G--SSISFAAKDLIRGLLVKDPQKRL 435
S+ S AKD IR LLVKDP++R+
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTERE--ILSLL 168
H+ + ++LG G V + G +A K + K L + R+ + R + ERE IL +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
HP + TL+ FE L++E SGG+L + ++AT+F ++L + Y
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT-EDEATQFL-KQILDGVHY 144
Query: 229 LHMMGVVYRDLKPENVLVREDG----HIMLSDFDLSLRC--------------FVSPKLV 270
LH + + DLKPEN+++ + I L DF ++ + FV+P++V
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 271 Q 271
Sbjct: 205 N 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + +LG G VY + + +A+KV+ K + KK++R TE +L L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L FET L++E +GG+L R + G ++SE+ ++L A+ YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD-RIVEKG-YYSERDAADAVKQILEAVAYLHEN 167
Query: 233 GVVYRDLKPENVLVRE---DGHIMLSDFDLS 260
G+V+RDLKPEN+L D + ++DF LS
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF-- 409
GT Y APEI+RG +G VD W+ GI Y LL G PF + +F + +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
P +S AKDL+R L+V DP+KRL + QHP+
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRL----TTFQALQHPW 308
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
D L H+ + ++LG G G V+ R G FA K + M + E + +S
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMS 209
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+L HP L L+ FE D ++ EF SGG+L + K ++A Y +V L
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGL 268
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK 268
++H V+ DLKPEN++ L D L + PK
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
GT E+ APE+ G G D W+ G+ Y LL G +PF G + ETL NV
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 411 EG--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
+ S IS KD IR LL+ DP R+ + +HP+ N
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWLTPGN 418
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
D L H+ + ++LG G G V+ R G FA K + M + E + +S
Sbjct: 47 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMS 103
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+L HP L L+ FE D ++ EF SGG+L + K ++A Y +V L
Sbjct: 104 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGL 162
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK 268
++H V+ DLKPEN++ L D L + PK
Sbjct: 163 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 204
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
GT E+ APE+ G G D W+ G+ Y LL G +PF G + ETL NV
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 411 EG--SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
+ S IS KD IR LL+ DP R+ + +HP+ N
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWLTPGN 312
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE--ILSLLDH 170
+ L + +G G V R+ G FA+K++D L +RE I +L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEY 228
P + L + +D ++ EF G DL +++ G +SE Y ++L AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 229 LHMMGVVYRDLKPENVLV---REDGHIMLSDFDLSLR 262
H +++RD+KPENVL+ + L DF ++++
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ 182
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN--VVGQPLK 408
VGT ++APE+++ + +G VD W G+ + LL G PF G +E LF + G+
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKM 251
Query: 409 FP-EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
P + S IS +AKDL+R +L+ DP +R+ E HP+ + + R + +P
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERI----TVYEALNHPWLKERD----RYAYKIHLP 303
Query: 468 KPVD-LSFINHKQKTPIPQNDKGAADSDRSSGPFLDF 503
+ V+ L N ++K KGA + SS F F
Sbjct: 304 ETVEQLRKFNARRKL------KGAVLAAVSSHKFNSF 334
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 64
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L++ LG G G V LA R A+K++D M + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHEN 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y H L +E+CSGG+L + +P E + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V+ E G A K++ G K + E +++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKT---RGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE+ L+ME+ GG+L R + +E T + ++ + ++H M +++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 239 LKPENVLV--REDGHIMLSDFDLSLR 262
LKPEN+L R+ I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG--QPLKF 409
GT E+LAPE++ D D W+ G+ Y LL G +PF G+ + ETL N++ L+
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
E IS AK+ I LL+K+ R+ A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRI----SASEALKHPWL 346
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 133/326 (40%), Gaps = 72/326 (22%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L + L+KKLG G G V+ + R G + A+K K A + +T REI+ L +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK---KIFDAFQNSTDAQRTFREIMILTE 64
Query: 170 ---HPFLPTLYSHFETDKFSCLLMEF-CSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
H + L + D + + F DLH + + + +Q + +++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQ---YVVYQLIKV 121
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCI 285
++YLH G+++RD+KP N+L+ + H+ ++DF LS R FV+ + V ++
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS-RSFVNIRRVTNN------------ 168
Query: 286 QPSCIDPACKLPVCVEPSCLQPSCFKPRFLNXXXXXXXXXXXXXXNSDSLPVLIAEPTSA 345
+P+ + + F D P+L
Sbjct: 169 ----------IPLSINENT-------ENF-----------------DDDQPIL------- 187
Query: 346 RSMSFVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG 404
+V T Y APEI+ G + +D W+ G E+L G+ F G+ L ++G
Sbjct: 188 --TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 405 QPLKFPEGSSI----SFAAKDLIRGL 426
+ FP + S AK +I L
Sbjct: 246 -VIDFPSNEDVESIQSPFAKTMIESL 270
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE++R D +G VD W G+ Y LL+G PF + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
PE +++ AKDLI +L +P KR+ A+E +HP W RST
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRI----TASEALKHP------WICQRST 269
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++L ++LG G V G +A K+++ L+ R + + E I LL HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPN 64
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ + F L+ + +GG+L +++SE ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 233 GVVYRDLKPENVLV---REDGHIMLSDFDLSL 261
G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+K+G G G V+ + A+K++D + ++ Q E +LS D P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y + D ++ME+ GG L + P E E+L L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 138
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K NVL+ E G + L+DF ++
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
T + FVGT ++APE+I+ + S D W+ GI EL G P + LF +
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
EG + S K+ + L K+P F+ A E+ +H F
Sbjct: 232 PKNNPPTLEG-NYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 274
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE++R D +G VD W G+ Y LL+G PF + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
PE +++ AKDLI +L +P KR+ A+E +HP W RST
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRI----TASEALKHP------WICQRST 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++L ++LG G V G +A K+++ L+ R + + E I LL HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPN 64
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ + F L+ + +GG+L +++SE ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 233 GVVYRDLKPENVLV---REDGHIMLSDFDLSL 261
G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G + D +FA K++ K +L + + E I L H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + F +++E C L L +R+ K +E R+Y +++L +YLH V++RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 239 LKPENVLVREDGHIMLSDFDLSLRC 263
LK N+ + ED + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKV 191
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P+ I+ A LI+ +L DP R
Sbjct: 257 EYSIPK--HINPVAASLIQKMLQTDPTAR 283
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G + D +FA K++ K +L + + E I L H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + F +++E C L L +R+ K +E R+Y +++L +YLH V++RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 239 LKPENVLVREDGHIMLSDFDLSLRC 263
LK N+ + ED + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKV 189
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P+ I+ A LI+ +L DP R
Sbjct: 255 EYSIPK--HINPVAASLIQKMLQTDPTAR 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G + D +FA K++ K +L + + E I L H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + F +++E C L L +R+ K +E R+Y +++L +YLH V++RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 239 LKPENVLVREDGHIMLSDFDLSLRC 263
LK N+ + ED + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKV 171
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P+ I+ A LI+ +L DP R
Sbjct: 237 EYSIPK--HINPVAASLIQKMLQTDPTAR 263
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+K+G G G V+ + A+K++D + ++ Q E +LS D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y + D ++ME+ GG L + P E E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K NVL+ E G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
T + +FVGT ++APE+I+ + S D W+ GI EL G P + LF +
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
EG + S K+ + L K+P F+ A E+ +H F
Sbjct: 217 PKNNPPTLEG-NYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G + D +FA K++ K +L + + E I L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + F +++E C L L +R+ K +E R+Y +++L +YLH V++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 239 LKPENVLVREDGHIMLSDFDLSLRC 263
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKV 167
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P+ I+ A LI+ +L DP R
Sbjct: 233 EYSIPK--HINPVAASLIQKMLQTDPTAR 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+K+G G G V+ + A+K++D + ++ Q E +LS D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y + D ++ME+ GG L + P E E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K NVL+ E G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
T + FVGT ++APE+I+ + S D W+ GI EL G P + LF +
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
EG + S K+ + L K+P F+ A E+ +H F
Sbjct: 217 PKNNPPTLEG-NYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G + D +FA K++ K +L + + E I L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + F +++E C L L +R+ K +E R+Y +++L +YLH V++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 239 LKPENVLVREDGHIMLSDFDLSLRC 263
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKV 167
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P+ I+ A LI+ +L DP R
Sbjct: 233 EYSIPK--HINPVAASLIQKMLQTDPTAR 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+K+G G G V+ + A+K++D + ++ Q E +LS D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y + D ++ME+ GG L + P E E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 143
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K NVL+ E G + L+DF ++
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
T + +FVGT ++APE+I+ + S D W+ GI EL G P + LF +
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
EG + S K+ + L K+P F+ A E+ +H F
Sbjct: 237 PKNNPPTLEG-NYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 279
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 107 DLG---LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
D+G L +FR+ KK+G G VY A G A+K + L K E +
Sbjct: 25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID 84
Query: 164 ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFSEQATRFYASE 221
+L L+HP + Y+ F D +++E GDL + + ++ + E+ Y +
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ ALE++H V++RD+KP NV + G + L D L
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG-NRETLFNVVGQPL 407
S VGT Y++PE I +G+ D W+ G YE+ ++PF G+ N +L + Q
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-C 253
Query: 408 KFPEGSSISFAA--KDLIRGLLVKDPQKR 434
+P S ++ + L+ + DP+KR
Sbjct: 254 DYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G + D +FA K++ K +L + + E I L H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
FE + F +++E C L L +R+ K +E R+Y +++L +YLH V++RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 239 LKPENVLVREDGHIMLSDFDLSLR 262
LK N+ + ED + + DF L+ +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATK 164
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
E R GT Y+APE++ GH VD W+ G Y LL+G+ PF+ + +ET
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
Query: 400 FNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ P+ I+ A LI+ +L DP R
Sbjct: 225 LRIKKNEYSIPK--HINPVAASLIQKMLQTDPTAR 257
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 22/188 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ LG G G V + R +A+KV++K A K E E+L LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ E ++ E +GG+L + K FSE +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 233 GVVYRDLKPENVLV---REDGHIMLSDFDLSLRCF---------------VSPKLVQSSD 274
+V+RDLKPEN+L+ +D I + DF LS CF ++P++++ +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 275 DPACRISS 282
D C + S
Sbjct: 200 DEKCDVWS 207
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++RG + D W+ G+ Y LL G PF G + L V F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
P+ +IS AKDLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 22/188 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ ++ LG G G V + R +A+KV++K A K E E+L LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ E ++ E +GG+L + K FSE +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 233 GVVYRDLKPENVLV---REDGHIMLSDFDLSLRCF---------------VSPKLVQSSD 274
+V+RDLKPEN+L+ +D I + DF LS CF ++P++++ +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 275 DPACRISS 282
D C + S
Sbjct: 200 DEKCDVWS 207
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++RG + D W+ G+ Y LL G PF G + L V F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
P+ +IS AKDLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE++R D +G VD W G+ Y LL+G PF + F
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 243
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
PE +++ AKDLI +L +P KR+ A E +HP+
Sbjct: 244 PSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++L ++LG G V G +A K+++ L+ R + + E I LL HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPN 82
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ + L+ + +GG+L +++SE ++L A+ + H M
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 233 GVVYRDLKPENVLVR---EDGHIMLSDFDLSL 261
GVV+RDLKPEN+L+ + + L+DF L++
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
T E+ APEI+ + G D W G+ Y LL G +PF G + ETL NV +F
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 411 EG--SSISFAAKDLIRGLLVKDPQKRL 435
E SS+S AKD I+ LL K+P+KRL
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRL 297
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 99 QCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRA 158
Q V+ K G + ++ +L++LG G G V+ + G +F K ++ +
Sbjct: 40 QPVEVKQGSV-YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK---YTV 95
Query: 159 QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFY 218
+ E I++ L HP L L+ FE L++EF SGG+L R SE Y
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD-RIAAEDYKMSEAEVINY 154
Query: 219 ASEVLLALEYLHMMGVVYRDLKPENVL--VREDGHIMLSDFDLSLR 262
+ L+++H +V+ D+KPEN++ ++ + + DF L+ +
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A +R G L A+K MD RK+ R E++ + D H +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y+ + ++MEF GG L + +E+ VL AL LH GV+
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDF 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R VGT ++APE+I +G VD W+ GI E++ G P+ + + +
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S + K + LLV+DP +R A E+ +HPF
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 404
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE++R D +G VD W G+ Y LL+G PF + F
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 232
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
PE +++ AKDLI +L +P KR+ A E +HP+
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++L ++LG G V G +A +++ L+ R + + E I LL HP
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH-QKLEREARICRLLKHPN 71
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ + L+ + +GG+L +++SE ++L A+ + H M
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 233 GVVYRDLKPENVLVR---EDGHIMLSDFDLSL 261
GVV+R+LKPEN+L+ + + L+DF L++
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTEREILSLLDH 170
+ L +G G G V +A + A+K+M+K + K + R +TE ++ L H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGG----DLHTLRQRQPGK------------------ 208
P + LY +E +++ CL+ME C GG L+ GK
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 209 -------HFSEQATRFYASEVLL---------ALEYLHMMGVVYRDLKPENVLVREDG-- 250
H ++ F E L+ AL YLH G+ +RD+KPEN L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 251 HIMLSDFDLS 260
I L DF LS
Sbjct: 208 EIKLVDFGLS 217
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 352 GTHEYLAPEIIR--GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
GT ++APE++ + +G D W+ G+ + LL+G PF G + +T+ V+ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S A+DL+ LL ++ +R R QHP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPWI 334
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G V + R +A+KV++K A K E E+L LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
E ++ E +GG+L + K FSE +V + Y+H +V+RD
Sbjct: 89 ILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 239 LKPENVLV---REDGHIMLSDFDLSLRCF---------------VSPKLVQSSDDPACRI 280
LKPEN+L+ +D I + DF LS CF ++P++++ + D C +
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDV 205
Query: 281 SS 282
S
Sbjct: 206 WS 207
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF- 409
+GT Y+APE++RG + D W+ G+ Y LL G PF G + L V F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 410 -PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEI 466
P+ +IS AKDLIR +L P R+ AT+ +HP W S+ P I
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHP------WIQKYSSETPTI 290
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Query: 133 RDMGCLFAMKVMD---KGMLAGRKKLMRAQTERE---ILSLLDHPFLPTLYSHFETDKFS 186
R G FA+K+M+ + + + + +R T RE + + HP + TL +E+ F
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ + G+L + SE+ TR +L A+ +LH +V+RDLKPEN+L+
Sbjct: 176 FLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
++ I LSDF S C + P
Sbjct: 234 DDNMQIRLSDFGFS--CHLEP 252
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 352 GTHEYLAPEIIRGD------GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
GT YLAPEI++ G+G VD W G+ + LL G PF L ++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 406 PLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+F PE S KDLI LL DP+ RL A + QHPFFE
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARL----TAEQALQHPFFE 364
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A +R G L A+K MD RK+ R E++ + D H +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y+ + ++MEF GG L + +E+ VL AL LH GV+
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDF 171
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R VGT ++APE+I +G VD W+ GI E++ G P+ + + +
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S + K + LLV+DP +R A E+ +HPF
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 284
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 139 FAMKVMDKGMLAGRKKLMRAQTEREILSLL---DHPFLPTLYSHFETDKFSCLLMEFCSG 195
FA+K++ K M A T++EI +L HP + L+ F + L+ME +G
Sbjct: 39 FAVKIISKRM--------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 196 GDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDG---HI 252
G+L + + KHFSE + +++ A+ ++H +GVV+RDLKPEN+L ++ I
Sbjct: 91 GEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
Query: 253 MLSDF 257
+ DF
Sbjct: 149 KIIDF 153
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 353 THEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEG 412
T Y APE++ +G+ + D W+ G+ Y +L G+ PF+ + T + V K +G
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 413 ---------SSISFAAKDLIRGLLVKDPQKRL 435
++S AKDLI+GLL DP KRL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A +R G L A+K MD RK+ R E++ + D H +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y+ + ++MEF GG L + +E+ VL AL LH GV+
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDF 214
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R VGT ++APE+I +G VD W+ GI E++ G P+ + + +
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S + K + LLV+DP +R A E+ +HPF
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A +R G L A+K MD RK+ R E++ + D H +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y+ + ++MEF GG L + +E+ VL AL LH GV+
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDF 169
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R VGT ++APE+I +G VD W+ GI E++ G P+ + + +
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S + K + LLV+DP +R A E+ +HPF
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A +R G L A+K MD RK+ R E++ + D H +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y+ + ++MEF GG L + +E+ VL AL LH GV+
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDF 160
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R VGT ++APE+I +G VD W+ GI E++ G P+ + + +
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S + K + LLV+DP +R A E+ +HPF
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A +R G L A+K MD RK+ R E++ + D H +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y+ + ++MEF GG L + +E+ VL AL LH GV+
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDF 164
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R VGT ++APE+I +G VD W+ GI E++ G P+ + + +
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 406 -PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + +S + K + LLV+DP +R A E+ +HPF
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGS- 413
EY APE+ + D +A D W+ G Y LL G PF N++ + N++ F E +
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 414 -SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF----ESVNWALIRS 460
IS A D + LLVK+ + R+ A+E QHP+ E V+ +IR+
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLKQKIERVSTKVIRT 275
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
DLG G F ++ + Y+A+ +KV + +K++ IL+
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKF--------VKVKGTDQVLVKKEI-------SILN 56
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
+ H + L+ FE+ + ++ EF SG D+ R +E+ Y +V AL
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFISGLDIFE-RINTSAFELNEREIVSYVHQVCEAL 115
Query: 227 EYLHMMGVVYRDLKPENVL--VREDGHIMLSDF 257
++LH + + D++PEN++ R I + +F
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF 148
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE++R + +G VD W G+ Y LL+G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 225
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
PE +++ AK+LI +L +P KR+ A E +HP W RST
Sbjct: 226 PSPEWDTVTPEAKNLINQMLTINPAKRI----TAHEALKHP------WVCQRST 269
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++L + +G G V G +A K+++ L+ R + + E I LL H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICRLLKHSN 64
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ + F L+ + +GG+L +++SE ++L A+ + H M
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 233 GVVYRDLKPENVLVR---EDGHIMLSDFDLSL 261
GVV+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V LA + G A+K+MD RK+ R E++ + D H +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDL-----RKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+Y + + +LMEF GG L + + +E+ VL AL YLH GV+
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG + LSDF
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDF 185
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ-PLK 408
VGT ++APE+I + + VD W+ GI E++ G P+ + + + + P K
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK 260
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+S +D + +LV+DPQ+R A E+ HPF
Sbjct: 261 LKNSHKVSPVLRDFLERMLVRDPQER----ATAQELLDHPFL 298
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKK 154
+A K+K G+L F + +LG G+ G V + R G + A K++ + A R +
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ 60
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
++R E ++L + P++ Y F +D + ME GG L + + K E+
Sbjct: 61 IIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEI 115
Query: 215 TRFYASEVLLALEYL-HMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ VL L YL +++RD+KP N+LV G I L DF +S
Sbjct: 116 LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
SFVGT Y+APE ++G + D W+ G+ EL +GR P +E L + G+P+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE-LEAIFGRPV 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE++R D +G VD W G+ Y LL+G PF + + F
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
PE +++ AK+LI +L +P KR+ A + +HP W RST
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRI----TADQALKHP------WVCQRST 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++L ++LG G V + +A K+++ L+ R + + E I LL HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPN 91
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ L+ + F L+ + +GG+L +++SE ++L ++ ++H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 233 GVVYRDLKPENVLVR---EDGHIMLSDFDLSL 261
+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 94 KWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGR 152
+ +A K K G+L F + +LG G+ G V+ + G + A K++ + A R
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 110
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
+++R E ++L + P++ Y F +D + ME GG L + ++ E
Sbjct: 111 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPE 165
Query: 213 QATRFYASEVLLALEYL-HMMGVVYRDLKPENVLVREDGHIMLSDFDLS----------- 260
Q + V+ L YL +++RD+KP N+LV G I L DF +S
Sbjct: 166 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 225
Query: 261 --LRCFVSPKLVQSS 273
R ++SP+ +Q +
Sbjct: 226 VGTRSYMSPERLQGT 240
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF 390
SFVGT Y++PE ++G + D W+ G+ E+ +GR P
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 349 SFVGTHEYLAPEIIRGD------GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
S GT YLAPEII G+G VD W+ G+ Y LL G PF L +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 403 VGQPLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
+ +F PE S KDL+ LV PQKR A E HPFF+
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQQ 289
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 139 FAMKVMD----KGMLAGRKKLMRAQTEREILSLLD---HPFLPTLYSHFETDKFSCLLME 191
+A+K++D A + +R T +E+ L HP + L +ET+ F L+ +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 192 FCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGH 251
G+L + SE+ TR +L + LH + +V+RDLKPEN+L+ +D +
Sbjct: 105 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 252 IMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
I L+DF S + DP ++ S C PS + P
Sbjct: 163 IKLTDFGFSCQL-----------DPGEKLRSVCGTPSYLAP 192
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD--HPFLPT 175
K+G G G V +A + G A+K MD RK+ R E++ + D H +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDL-----RKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVV 235
+YS + ++MEF GG L + +E+ VL AL YLH GV+
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 236 YRDLKPENVLVREDGHIMLSDF 257
+RD+K +++L+ DG I LSDF
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDF 185
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ-PLK 408
VGT ++APE+I +G+ VD W+ GI E++ G P+ + + + P +
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPR 260
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ +S + + +LV++P +R A E+ HPF +
Sbjct: 261 VKDLHKVSSVLRGFLDLMLVREPSQRA----TAQELLGHPFLK 299
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 107 DLGLGH----FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
DL + H + L+K +G G+ G L + L A+K +++G + + A +R
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG------EKIAANVKR 64
Query: 163 EILS--LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
EI++ L HP + T ++ME+ SGG+L R G+ FSE RF+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQ 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLV 246
+++ + Y H M V +RDLK EN L+
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLL 148
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 349 SFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKG----NGNRETLFNVV 403
S VGT Y+APE++ + + G D W+ G+ Y +L+G PF+ R+T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ IS + LI + V DP KR+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 107 DLGLGH----FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
DL + H + L+K +G G+ G L + L A+K +++G + + +R
Sbjct: 11 DLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG------EKIDENVKR 64
Query: 163 EILS--LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
EI++ L HP + T ++ME+ SGG+L R G+ FSE RF+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQ 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDG----HIMLSDFDLS 260
+++ + Y H M V +RDLK EN L+ DG + ++DF S
Sbjct: 123 QLISGVSYAHAMQVAHRDLKLENTLL--DGSPAPRLKIADFGYS 164
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKG--- 392
VL ++P SA VGT Y+APE++ + + G D W+ G+ Y +L+G PF+
Sbjct: 168 VLHSQPKSA-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
Query: 393 -NGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
R+T+ ++ P+ IS + LI + V DP KR+ EI+ H +F
Sbjct: 223 PKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTERE 163
GD+ G + + + G +G +YLA R++ V+ KG++ + A ER+
Sbjct: 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVN---GRPVVLKGLVHSGDAEAQAMAMAERQ 131
Query: 164 ILSLLDHPFLPTLYSHFE-----TDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFY 218
L+ + HP + +++ E D ++ME+ G L +R G+ Y
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAIAY 187
Query: 219 ASEVLLALEYLHMMGVVYRDLKPENVLVRED 249
E+L AL YLH +G+VY DLKPEN+++ E+
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 352 GTHEYLAPEIIRGD------GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
GT YLAPEII G+G VD W+ G+ Y LL G PF L ++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 406 PLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
+F PE S KDL+ LV PQKR A E HPFF+
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQQ 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 139 FAMKVMD----KGMLAGRKKLMRAQTEREILSLLD---HPFLPTLYSHFETDKFSCLLME 191
+A+K++D A + +R T +E+ L HP + L +ET+ F L+ +
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 192 FCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGH 251
G+L + SE+ TR +L + LH + +V+RDLKPEN+L+ +D +
Sbjct: 92 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 149
Query: 252 IMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
I L+DF S + DP ++ C PS + P
Sbjct: 150 IKLTDFGFSCQL-----------DPGEKLREVCGTPSYLAP 179
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 352 GTHEYLAPEIIRGD------GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
GT YLAPEII G+G VD W+ G+ Y LL G PF L ++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 406 PLKF--PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES 452
+F PE S KDL+ LV PQKR A E HPFF+
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQQ 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 139 FAMKVMD----KGMLAGRKKLMRAQTEREILSLLD---HPFLPTLYSHFETDKFSCLLME 191
+A+K++D A + +R T +E+ L HP + L +ET+ F L+ +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 192 FCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGH 251
G+L + SE+ TR +L + LH + +V+RDLKPEN+L+ +D +
Sbjct: 105 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 252 IMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
I L+DF S + DP ++ C PS + P
Sbjct: 163 IKLTDFGFSCQL-----------DPGEKLREVCGTPSYLAP 192
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
++ + ++LG G V + G FA K+++ L+ R + + E I L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
+ L+ + + F L+ + +GG+L + +SE ++L ++ Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 232 MGVVYRDLKPENVLVREDGH---IMLSDFDLSL 261
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE+++ D + VD W G+ Y LL+G PF + +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRL 435
PE +++ AK LI +L +P+KR+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDH 170
+ + K+G G G V+ RD G + A+K K + + +++ REI L L H
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
P L L F + L+ E+C LH L + Q G E + + L A+ + H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCH 119
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
++RD+KPEN+L+ + I L DF + R P
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFA-RLLTGP 155
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 40/136 (29%)
Query: 351 VGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGN-------RETL--- 399
V T Y +PE++ GD +G VD W G F ELL G + G + R+TL
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 400 -------------FNVVGQP---------LKFPEGSSISFAAKDLIRGLLVKDPQKRLGF 437
F+ V P LKFP +IS+ A L++G L DP +RL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFP---NISYPALGLLKGCLHMDPTERL-- 277
Query: 438 KRGATEIKQHPFFESV 453
++ HP+FE++
Sbjct: 278 --TCEQLLHHPYFENI 291
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+++G G G V+ + A+K++D + ++ Q E +LS D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ Y + ++ME+ GG L + P F E E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSE 139
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K NVL+ E G + L+DF ++
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA 167
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
T + +FVGT ++APE+I+ + S D W+ GI EL G P LF +
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
Query: 403 -VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + SF K+ I L KDP F+ A E+ +H F
Sbjct: 233 PKNNPPTLVGDFTKSF--KEFIDACLNKDP----SFRPTAKELLKHKFI 275
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
++ + ++LG G V + G FA K+++ L+ R + + E I L HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 64
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
+ L+ + + F L+ + +GG+L + +SE ++L ++ Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 232 MGVVYRDLKPENVLVREDGH---IMLSDFDLSL 261
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE+++ D + VD W G+ Y LL+G PF + +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRL 435
PE +++ AK LI +L +P+KR+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
++ + ++LG G V + G FA K+++ L+ R + + E I L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
+ L+ + + F L+ + +GG+L + +SE ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 232 MGVVYRDLKPENVLVREDGH---IMLSDFDLSL 261
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE+++ D + VD W G+ Y LL+G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRL 435
PE +++ AK LI +L +P+KR+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
++ + ++LG G V + G FA K+++ L+ R + + E I L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
+ L+ + + F L+ + +GG+L + +SE ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 232 MGVVYRDLKPENVLVREDGH---IMLSDFDLSL 261
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
F GT YL+PE+++ D + VD W G+ Y LL+G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 410 --PEGSSISFAAKDLIRGLLVKDPQKRL 435
PE +++ AK LI +L +P+KR+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE--ILSLLDH 170
+ L + +G G V R+ G FA+K++D L +RE I +L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEY 228
P + L + +D ++ EF G DL +++ G +SE Y ++L AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 229 LHMMGVVYRDLKPENVLV 246
H +++RD+KP VL+
Sbjct: 146 CHDNNIIHRDVKPHCVLL 163
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP 410
VGT ++APE+++ + +G VD W G+ + LL G PF G R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 411 -EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIPKP 469
+ S IS +AKDL+R +L+ DP +R+ E HP+ + + R + +P+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERI----TVYEALNHPWLKERD----RYAYKIHLPET 305
Query: 470 VD-LSFINHKQKTPIPQNDKGAADSDRSSGPFLDF 503
V+ L N ++K KGA + SS F F
Sbjct: 306 VEQLRKFNARRKL------KGAVLAAVSSHKFNSF 334
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE--ILSLLDH 170
+ L + +G G V R+ G FA+K++D L +RE I +L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEY 228
P + L + +D ++ EF G DL +++ G +SE Y ++L AL Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 229 LHMMGVVYRDLKPENVLV 246
H +++RD+KP VL+
Sbjct: 148 CHDNNIIHRDVKPHCVLL 165
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN--VVGQPLK 408
VGT ++APE+++ + +G VD W G+ + LL G PF G +E LF + G+
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKM 253
Query: 409 FP-EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
P + S IS +AKDL+R +L+ DP +R+ E HP+ + + R + +P
Sbjct: 254 NPRQWSHISESAKDLVRRMLMLDPAERI----TVYEALNHPWLKERD----RYAYKIHLP 305
Query: 468 KPVD-LSFINHKQKTPIPQNDKGAADSDRSSGPFLDF 503
+ V+ L N ++K KGA + SS F F
Sbjct: 306 ETVEQLRKFNARRKL------KGAVLAAVSSHKFNSF 336
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 94 KWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGR 152
+ +A K K G+L F + +LG G+ G V+ + G + A K++ + A R
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 75
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
+++R E ++L + P++ Y F +D + ME GG L + ++ E
Sbjct: 76 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPE 130
Query: 213 QATRFYASEVLLALEYL-HMMGVVYRDLKPENVLVREDGHIMLSDFDLS----------- 260
Q + V+ L YL +++RD+KP N+LV G I L DF +S
Sbjct: 131 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 261 --LRCFVSPKLVQSS 273
R ++SP+ +Q +
Sbjct: 191 VGTRSYMSPERLQGT 205
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF 390
SFVGT Y++PE ++G + D W+ G+ E+ +GR P
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L ++G G G VY + A+K++D + ++ Q E +LS D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ + + ++ME+ GG L + P E E+L L+YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHSE 135
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RD+K NVL+ E G + L+DF ++
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA 163
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
T + FVGT ++APE+I+ + D W+ GI EL G P LF +
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 228
Query: 403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
EG S K+ + L KDP+ F+ A E+ +H F
Sbjct: 229 PKNSPPTLEGQH-SKPFKEFVEACLNKDPR----FRPTAKELLKHKFI 271
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 106 GDLGLGH----FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTE 161
DL + H + L+K +G G+ G L + L A+K +++G + + +
Sbjct: 9 ADLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG------EKIDENVK 62
Query: 162 REILS--LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
REI++ L HP + T ++ME+ SGG+L R G+ FSE RF+
Sbjct: 63 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFF 120
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLV 246
+++ + Y H M V +RDLK EN L+
Sbjct: 121 QQLISGVSYCHAMQVCHRDLKLENTLL 147
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 349 SFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKG----NGNRETLFNVV 403
S VGT Y+APE++ + + G D W+ G+ Y +L+G PF+ R+T+ ++
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ IS + LI + V DP KR+ EI+ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 276
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 81/169 (47%), Gaps = 38/169 (22%)
Query: 139 FAMKVMDKGMLAGRKKLMRAQTEREILSLL---DHPFLPTLYSHFETDKFSCLLMEFCSG 195
FA+K++DK R TE EI LL HP + TL ++ K+ ++ E G
Sbjct: 50 FAVKIIDKSK--------RDPTE-EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKG 100
Query: 196 GDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVL-VREDGH- 251
G+L LRQ K FSE+ + +EYLH GVV+RDLKP N+L V E G+
Sbjct: 101 GELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNP 156
Query: 252 --IMLSDFDLS--LRC-------------FVSPKLVQSSD-DPACRISS 282
I + DF + LR FV+P++++ D AC I S
Sbjct: 157 ESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWS 205
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 353 THEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ------P 406
T ++APE++ G+ +A D W+ G+ Y L G TPF NG +T ++ +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSGKFS 241
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW 455
L +S+S AKDL+ L DP +RL A + +HP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKXLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 107 DLGLGH----FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
DL + H + L+K +G G+ G L + L A+K +++G + + +R
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG------EKIDENVKR 64
Query: 163 EILS--LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
EI++ L HP + T ++ME+ SGG+L R G+ FSE RF+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQ 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLV 246
+++ + Y H M V +RDLK EN L+
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLL 148
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 349 SFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKG----NGNRETLFNVV 403
S VGT Y+APE++ + + G D W+ G+ Y +L+G PF+ R+T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ IS + LI + V DP KR+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 107 DLGLGH----FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
DL + H + L+K +G G+ G L + L A+K +++G + + +R
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG------EKIDENVKR 64
Query: 163 EILS--LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
EI++ L HP + T ++ME+ SGG+L R G+ FSE RF+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQ 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLV 246
+++ + Y H M V +RDLK EN L+
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLL 148
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 351 VGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKG----NGNRETLFNVVGQ 405
VGT Y+APE++ + + G D W+ G+ Y +L+G PF+ R+T+ ++
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ IS + LI + V DP KR+ EI+ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMR-------AQTEREILSLLDHP 171
LG G V A G +A+K+++K R ++ R Q + IL L++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF- 79
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
FE D L+ E GG + Q+Q KHF+E+ +V AL++LH
Sbjct: 80 --------FEDDTRFYLVFEKLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHT 129
Query: 232 MGVVYRDLKPENVLVREDGH---IMLSDFDL 259
G+ +RDLKPEN+L + + DFDL
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDL 160
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 331 NSDSLPVLIAEPTSARSMSFVGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLL 385
N+ P+ E T+ G+ EY+APE++ + + D W+ G+ Y +L
Sbjct: 167 NNSCTPITTPELTTP-----CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
Query: 386 GRTPFKGNGN--------------RETLFNVVGQ-PLKFPEG--SSISFAAKDLIRGLLV 428
G PF G+ + LF + + +FP+ + IS AKDLI LLV
Sbjct: 222 GYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLV 281
Query: 429 KDPQKRLGFKRGATEIKQHPFFE 451
+D ++RL A ++ QHP+ +
Sbjct: 282 RDAKQRL----SAAQVLQHPWVQ 300
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 81/169 (47%), Gaps = 38/169 (22%)
Query: 139 FAMKVMDKGMLAGRKKLMRAQTEREILSLL---DHPFLPTLYSHFETDKFSCLLMEFCSG 195
FA+K++DK R TE EI LL HP + TL ++ K+ ++ E G
Sbjct: 50 FAVKIIDKSK--------RDPTE-EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100
Query: 196 GDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVL-VREDGH- 251
G+L LRQ K FSE+ + +EYLH GVV+RDLKP N+L V E G+
Sbjct: 101 GELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNP 156
Query: 252 --IMLSDFDLS--LRC-------------FVSPKLVQSSD-DPACRISS 282
I + DF + LR FV+P++++ D AC I S
Sbjct: 157 ESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWS 205
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 353 THEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ------P 406
T ++APE++ G+ +A D W+ G+ Y +L G TPF NG +T ++ +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSGKFS 241
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW 455
L +S+S AKDL+ +L DP +RL A + +HP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 94 KWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGR 152
+ +A K K G+L F + +LG G+ G V+ + G + A K++ + A R
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 67
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
+++R E ++L + P++ Y F +D + ME GG L + ++ E
Sbjct: 68 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPE 122
Query: 213 QATRFYASEVLLALEYL-HMMGVVYRDLKPENVLVREDGHIMLSDFDLS----------- 260
Q + V+ L YL +++RD+KP N+LV G I L DF +S
Sbjct: 123 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 182
Query: 261 --LRCFVSPKLVQSS 273
R ++SP+ +Q +
Sbjct: 183 VGTRSYMSPERLQGT 197
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ--- 405
SFVGT Y++PE ++G + D W+ G+ E+ +GR P +F ++
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
Query: 406 --PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKR 439
P K P G S +D + L+K+P +R K+
Sbjct: 241 EPPPKLPSG-VFSLEFQDFVNKCLIKNPAERADLKQ 275
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 353 THEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET---LFNVVGQ---P 406
T ++APE+++ G+ D W+ GI Y +L G TPF NG +T + +G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGKFT 246
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
L +++S AKDL+ +L DP +RL A ++ QHP+
Sbjct: 247 LSGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 139 FAMKVMDKGMLAGRKKLMRAQTEREILSLL---DHPFLPTLYSHFETDKFSCLLMEFCSG 195
+A+KV+DK + EI LL HP + TL ++ K L+ E G
Sbjct: 55 YAVKVIDKS---------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG 105
Query: 196 GDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVL-VREDGH--- 251
G+L RQ K FSE+ F + +EYLH GVV+RDLKP N+L V E G+
Sbjct: 106 GELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC 163
Query: 252 IMLSDFDLS--LRC-------------FVSPKLVQSSD-DPACRISSYCI 285
+ + DF + LR FV+P++++ D C I S I
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGI 213
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 353 THEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET---LFNVVGQ---P 406
T ++APE+++ G+ D W+ GI Y +L G TPF NG +T + +G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGKFT 246
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPF 449
L +++S AKDL+ +L DP +RL A ++ QHP+
Sbjct: 247 LSGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 139 FAMKVMDKGMLAGRKKLMRAQTEREILSLL---DHPFLPTLYSHFETDKFSCLLMEFCSG 195
+A+KV+DK + EI LL HP + TL ++ K L+ E G
Sbjct: 55 YAVKVIDKS---------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG 105
Query: 196 GDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVL-VREDGH--- 251
G+L RQ K FSE+ F + +EYLH GVV+RDLKP N+L V E G+
Sbjct: 106 GELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC 163
Query: 252 IMLSDFDLS--LRC-------------FVSPKLVQSSD-DPACRISSYCI 285
+ + DF + LR FV+P++++ D C I S I
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGI 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF S DL + Y ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKPEN+L+ +G I L+DF L+ R F P
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVP 159
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 116 LKKLGCGDIGSV---YLAELRDMGCLFAMKVMDKGMLAGRK-----KLMRAQTEREILSL 167
L+ +G G GSV Y A LR + + + ++ R+ +L++ ++ L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 168 LDHPFLPTLYSHFETDKFS-CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD F P + FS L+ G DL+ + + Q S++ +F ++L L
Sbjct: 93 LD-VFTPAT----SIEDFSEVYLVTTLMGADLNNIVKSQA---LSDEHVQFLVYQLLRGL 144
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+Y+H G+++RDLKP NV V ED + + DF L+
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 350 FVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI+ H VD W+ G ELL G+ F G+ + L VVG
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 247
Query: 406 P 406
P
Sbjct: 248 P 248
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G R+ G + MK + + ++ ++ E +++ L+HP +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKFIG 74
Query: 179 HFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRD 238
DK + E+ GG L + + ++ Q F A ++ + YLH M +++RD
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AKDIASGMAYLHSMNIIHRD 133
Query: 239 LKPENVLVREDGHIMLSDFDLS 260
L N LVRE+ +++++DF L+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLA 155
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL 384
+ +P + + VG ++APE+I G + VD ++FGI E++
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF S DL + Y ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKPEN+L+ +G I L+DF L+ R F P
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVP 157
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS--LLDH 170
+ +K +G G+ G L + L A+K +++G + +REI++ L H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG------AAIDENVQREIINHRSLRH 75
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
P + T ++ME+ SGG+L+ R G+ FSE RF+ ++L + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 231 MMGVVYRDLKPENVLV 246
M + +RDLK EN L+
Sbjct: 134 SMQICHRDLKLENTLL 149
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 349 SFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKG----NGNRETLFNVV 403
S VGT Y+APE++ R + G D W+ G+ Y +L+G PF+ R+T+ ++
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P+ IS LI + V DP R+ EIK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIP----EIKTHSWF 278
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQR--QPGKHFS----EQA 214
E + +S HP + + Y+ F L+M+ SGG + + + G+H S E
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
EVL LEYLH G ++RD+K N+L+ EDG + ++DF +S
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 349 SFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPF-KGNGNRETLFNVVGQP 406
+FVGT ++APE++ + G+ D W+FGI EL G P+ K + + + P
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244
Query: 407 LKFPEG-------SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G + + +I L KDP+KR A E+ +H FF+
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 292
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQR--QPGKHFS----EQA 214
E + +S HP + + Y+ F L+M+ SGG + + + G+H S E
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
EVL LEYLH G ++RD+K N+L+ EDG + ++DF +S
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 349 SFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPF-KGNGNRETLFNVVGQP 406
+FVGT ++APE++ + G+ D W+FGI EL G P+ K + + + P
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 239
Query: 407 LKFPEG-------SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
G + + +I L KDP+KR A E+ +H FF+
Sbjct: 240 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 287
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTEREI 164
G+L F + +LG G+ G V+ + G + A K++ + A R +++R E ++
Sbjct: 4 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQV 60
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
L + P++ Y F +D + ME GG L + ++ EQ + V+
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIK 118
Query: 225 ALEYL-HMMGVVYRDLKPENVLVREDGHIMLSDFDLS-------------LRCFVSPKLV 270
L YL +++RD+KP N+LV G I L DF +S R ++SP+ +
Sbjct: 119 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERL 178
Query: 271 QSS 273
Q +
Sbjct: 179 QGT 181
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
FVGT Y++PE ++G + D W+ G+ E+ +GR P E L +V +P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPK 225
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKR 439
+ S +D + L+K+P +R K+
Sbjct: 226 LPSAVFSLEFQDFVNKCLIKNPAERADLKQ 255
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI- 164
G + +F+ ++K+G G G VY A + G + A+K K L + + + REI
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREIS 57
Query: 165 -LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L L+HP + L T+ L+ EF DL T + Y ++L
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
L + H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 159
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LS 166
G+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 118 KLGCGDIGSVY--LAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTEREILSLLDHPFLP 174
+LGCG+ GSV + +R A+KV+ +G A +++MR E +I+ LD+P++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIV 73
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTL----RQRQPGKHFSEQATRFYASEVLLALEYLH 230
L + + L+ME GG LH R+ P + +E +V + ++YL
Sbjct: 74 RLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYLE 127
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL NVL+ + +SDF LS
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 331 NSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAV-----DWWTFGIFFYELLL 385
N D P+ ++ ++ G+ EY+APE++ +++ D W+ G+ Y LL
Sbjct: 167 NGDCSPI-----STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 386 GRTPFKGN--------------GNRETLFNVVGQ-PLKFPEG--SSISFAAKDLIRGLLV 428
G PF G + LF + + +FP+ + IS AAKDLI LLV
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 429 KDPQKRLGFKRGATEIKQHPFFE 451
+D ++RL A ++ QHP+ +
Sbjct: 282 RDAKQRL----SAAQVLQHPWVQ 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPE 242
D+F + + G L + +R +HF+E +V AL++LH G+ +RDLKPE
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 243 NVLVREDGH---IMLSDFDL 259
N+L + + DFDL
Sbjct: 141 NILCEHPNQVSPVKICDFDL 160
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM-----DKGMLAGRKKLMRAQTEREILSL 167
++ L+K+G G G VY A+ G + A+K + D+G+ + A E +L
Sbjct: 23 YQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPST------AIREISLLKE 75
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L HP + +L +++ L+ EF L + + G + + Y ++L +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVA 133
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H +++RDLKP+N+L+ DG + L+DF L+ R F P
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLA-RAFGIP 172
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 351 VGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG-- 404
V T Y AP+++ G + ++VD W+ G F E++ G+ F G + + L F+++G
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 405 QPLKFPEGSSISFAAK-----------------------DLIRGLLVKDPQKRLGFKRGA 441
P ++P+ + + DL+ +L DP KR+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 442 TEIKQHPFFESVN 454
+ HP+F+ ++
Sbjct: 296 RDAMNHPYFKDLD 308
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTEREILSLLDHP 171
F + +LG G+ G V+ + G + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL-H 230
++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS-------------LRCFVSPKLVQSS 273
+++RD+KP N+LV G I L DF +S R ++SP+ +Q +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE------TLFNV 402
SFVGT Y++PE ++G + D W+ G+ E+ +GR P +E +F +
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
Query: 403 VGQ-----PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKR 439
+ P K P G S +D + L+K+P +R K+
Sbjct: 222 LDYIVNEPPPKLPSG-VFSLEFQDFVNKCLIKNPAERADLKQ 262
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 331 NSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAV-----DWWTFGIFFYELLL 385
N D P+ ++ ++ G+ EY+APE++ +++ D W+ G+ Y LL
Sbjct: 167 NGDCSPI-----STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 386 GRTPFKGN--------------GNRETLFNVVGQ-PLKFPEG--SSISFAAKDLIRGLLV 428
G PF G + LF + + +FP+ + IS AAKDLI LLV
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 429 KDPQKRLGFKRGATEIKQHPFFE 451
+D ++RL A ++ QHP+ +
Sbjct: 282 RDAKQRL----SAAQVLQHPWVQ 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPE 242
D+F + + G L + +R +HF+E +V AL++LH G+ +RDLKPE
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 243 NVLVREDGH---IMLSDFDL 259
N+L + + DF L
Sbjct: 141 NILCEHPNQVSPVKICDFGL 160
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM-----DKGMLAGRKKLMRAQTEREILSL 167
++ L+K+G G G VY A+ G + A+K + D+G+ + A E +L
Sbjct: 23 YQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPST------AIREISLLKE 75
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L HP + +L +++ L+ EF L + + G + + Y ++L +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVA 133
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H +++RDLKP+N+L+ DG + L+DF L+ R F P
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLA-RAFGIP 172
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 351 VGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG-- 404
V T Y AP+++ G + ++VD W+ G F E++ G+ F G + + L F+++G
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 405 QPLKFPEGSSISFAAK-----------------------DLIRGLLVKDPQKRLGFKRGA 441
P ++P+ + + DL+ +L DP KR+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 442 TEIKQHPFFESVN 454
+ HP+F+ ++
Sbjct: 296 RDAMNHPYFKDLD 308
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTEREILSLLDHP 171
F + +LG G+ G V+ + G + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL-H 230
++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS-------------LRCFVSPKLVQSS 273
+++RD+KP N+LV G I L DF +S R ++SP+ +Q +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF 390
SFVGT Y++PE ++G + D W+ G+ E+ +GR P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTEREILSLLDHP 171
F + +LG G+ G V+ + G + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL-H 230
++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS-------------LRCFVSPKLVQSS 273
+++RD+KP N+LV G I L DF +S R ++SP+ +Q +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF 390
SFVGT Y++PE ++G + D W+ G+ E+ +GR P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKPEN+L+ +G I L+DF L+ R F P
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVP 158
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 116 LKKLGCGDIGSV---YLAELRDMGCLFAMKVMDKGMLAGRK-----KLMRAQTEREILSL 167
L+ +G G GSV Y A LR + + + ++ R+ +L++ ++ L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 168 LDHPFLPTLYSHFETDKFS-CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD F P + FS L+ G DL+ + + Q S++ +F ++L L
Sbjct: 93 LD-VFTPAT----SIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGL 144
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+Y+H G+++RDLKP NV V ED + + DF L+
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 350 FVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI+ H VD W+ G ELL G+ F G+ + L VVG
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 247
Query: 406 P 406
P
Sbjct: 248 P 248
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH 170
G + + ++LG G G V +D G A+K + + ++ R E +I+ L+H
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE--RWCLEIQIMKKLNH 71
Query: 171 PFL------PTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRFYASEVL 223
P + P + L ME+C GGDL L Q + E R S++
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 224 LALEYLHMMGVVYRDLKPENVLVR 247
AL YLH +++RDLKPEN++++
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQ 155
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGN 393
FVGT +YLAPE++ + VD+W+FG +E + G PF N
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKPEN+L+ +G I L+DF L+ R F P
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVP 157
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDHPFLPTL 176
LG G +VY A ++ + A+K + G + K + REI L L HP + L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 177 YSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVY 236
F L+ +F DL + + + + Y L LEYLH +++
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVI-IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 237 RDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
RDLKP N+L+ E+G + L+DF L+ + F SP
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLA-KSFGSP 165
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 351 VGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPF-KGNGNRETL---FNVVGQ 405
V T Y APE++ G +G VD W G ELLL R PF G+ + + L F +G
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGT 231
Query: 406 P 406
P
Sbjct: 232 P 232
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF S DL + Y ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 158
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH 170
G + + ++LG G G V +D G A+K + + ++ R E +I+ L+H
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE--RWCLEIQIMKKLNH 72
Query: 171 PFL------PTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRFYASEVL 223
P + P + L ME+C GGDL L Q + E R S++
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 224 LALEYLHMMGVVYRDLKPENVLVR 247
AL YLH +++RDLKPEN++++
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQ 156
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGN 393
FVGT +YLAPE++ + VD+W+FG +E + G PF N
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 118 KLGCGDIGSVY--LAELRDMGCLFAMKVMDKGM-LAGRKKLMRAQTEREILSLLDHPFLP 174
+LGCG+ GSV + +R A+KV+ +G A +++MR E +I+ LD+P++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIV 399
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTL----RQRQPGKHFSEQATRFYASEVLLALEYLH 230
L + + L+ME GG LH R+ P + +E +V + ++YL
Sbjct: 400 RLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYLE 453
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+R+L NVL+ + +SDF LS
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF S DL + Y ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 159
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 6/166 (3%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
F+ L+KLG G +VY + G A+K + G A E ++ L H
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS--TAIREISLMKELKHE 63
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPG---KHFSEQATRFYASEVLLALEY 228
+ LY T+ L+ EF + R G + +++ ++L L +
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
H +++RDLKP+N+L+ + G + L DF L+ R F P SS+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSE 168
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 349 SFVGTHEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
S V T Y AP+++ G + +++D W+ G E++ G+ F G + E L F+++G
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
Query: 405 QP 406
P
Sbjct: 227 TP 228
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHP 171
F L+K+G G+ GSV+ R GC++A+K K LAG A E ++L H
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEYL 229
+ +S + D + E+C+GG L + +F E + +V L Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 230 HMMGVVYRDLKPENVLV 246
H M +V+ D+KP N+ +
Sbjct: 130 HSMSLVHMDIKPSNIFI 146
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
++++ KLG G + +VYLAE + A+K + + L R + E S L H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ ++ E D L+ME+ G L + G + A F +++L +++ H M
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINF-TNQILDGIKHAHDM 130
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSS 273
+V+RD+KP+N+L+ + + + DF ++ + L Q++
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTN 170
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKG 392
++E + ++ +GT +Y +PE +G+ D ++ GI YE+L+G PF G
Sbjct: 161 LSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHP 171
F L+K+G G+ GSV+ R GC++A+K K LAG A E ++L H
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEYL 229
+ +S + D + E+C+GG L + +F E + +V L Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 230 HMMGVVYRDLKPENVLV 246
H M +V+ D+KP N+ +
Sbjct: 130 HSMSLVHMDIKPSNIFI 146
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTEREILSLLDHP 171
F + +LG G+ G V+ + G + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL-H 230
++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS-------------LRCFVSPKLVQSS 273
+++RD+KP N+LV G I L DF +S R ++SP+ +Q +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF 390
SFVGT Y++PE ++G + D W+ G+ E+ +GR P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-AGRKKLMRAQTEREILSLLDHP 171
F + +LG G+ G V+ + G + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL-H 230
++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS-------------LRCFVSPKLVQSS 273
+++RD+KP N+LV G I L DF +S R ++SP+ +Q +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF 390
SFVGT Y++PE ++G + D W+ G+ E+ +GR P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHP 171
F L+K+G G+ GSV+ R GC++A+K K LAG A E ++L H
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEYL 229
+ +S + D + E+C+GG L + +F E + +V L Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 230 HMMGVVYRDLKPENVLV 246
H M +V+ D+KP N+ +
Sbjct: 132 HSMSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHP 171
F L+K+G G+ GSV+ R GC++A+K K LAG A E ++L H
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQHS 67
Query: 172 FLPTLYSHFETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEYL 229
+ +S + D + E+C+GG L + +F E + +V L Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 230 HMMGVVYRDLKPENVLV 246
H M +V+ D+KP N+ +
Sbjct: 128 HSMSLVHMDIKPSNIFI 144
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 106 GDLG-LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
G LG + +F+ ++K+G G G VY A + G + A+K K L + + + REI
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 57
Query: 165 --LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
L L+HP + L T+ L+ EF DL + Y ++
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 223 LLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
L L + H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 160
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 288 ----HPFFQDVT 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKPEN+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI- 164
G + + + ++G G G+VY A G A+K + G + T RE+
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 165 ----LSLLDHPFLPTLYSHFETDKFS-----CLLMEFCSGGDLHTLRQRQPGKHFSEQAT 215
L +HP + L T + L+ E DL T + P +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETI 122
Query: 216 RFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + L L++LH +V+RDLKPEN+LV G + L+DF L+
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APE++ + + VD W+ G F E+ + F GN + L F+++G P
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 112 HFRLLKK-LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH 170
H LL LG G +V+ + G LFA+KV + ++ + + E E+L L+H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNH 66
Query: 171 PFLPTLYSHFE--TDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA--SEVLLAL 226
+ L++ E T + L+MEFC G L+T+ + +P + + F +V+ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGM 125
Query: 227 EYLHMMGVVYRDLKPENVL--VREDGHIM--LSDF 257
+L G+V+R++KP N++ + EDG + L+DF
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 348 MSFVGTHEYLAPE-----IIRGD---GHGSAVDWWTFGIFFYELLLGRTPFK----GNGN 395
+ GT EYL P+ ++R D +G+ VD W+ G+ FY G PF+ N
Sbjct: 173 VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 396 RETLFNVV-GQP 406
+E ++ ++ G+P
Sbjct: 233 KEVMYKIITGKP 244
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 116 LKKLGCGDIGSV---YLAELRDMGCLFAMKVMDKGMLAGRK-----KLMRAQTEREILSL 167
L+ +G G GSV Y A LR + + + ++ R+ +L++ ++ L
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 168 LDHPFLPTLYSHFETDKFS-CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD F P + FS L+ G DL+ + + Q S++ +F ++L L
Sbjct: 85 LD-VFTPAT----SIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGL 136
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+Y+H G+++RDLKP NV V ED + + DF L+
Sbjct: 137 KYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 350 FVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI+ H VD W+ G ELL G+ F G+ + L VVG
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 239
Query: 406 P 406
P
Sbjct: 240 P 240
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 158
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ + L+K+G G G+V+ A+ R+ + A+K + L + + + REI L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L H + L+ +DK L+ EFC DL G + + + ++L L
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEIVKSFLFQLLKGLG 115
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS------LRCF 264
+ H V++RDLKP+N+L+ +G + L+DF L+ +RC+
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL------LD 169
L ++G G G V+ R G + A+K M R+ + + +R ++ L D
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQM-------RRSGNKEENKRILMDLDVVLKSHD 82
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
P++ + F T+ + ME G L++R G E+ ++ AL YL
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGP-IPERILGKMTVAIVKALYYL 140
Query: 230 -HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYC---I 285
GV++RD+KP N+L+ E G I L DF +S R DD A S+ C +
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV---------DDKAKDRSAGCAAYM 191
Query: 286 QPSCIDP 292
P IDP
Sbjct: 192 APERIDP 198
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 351 VGTHEYLAPEII-----RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
G Y+APE I + D W+ GI EL G+ P+K N +T F V+ +
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK---NCKTDFEVLTK 241
Query: 406 PLK-----FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
L+ P S + ++ L KD +KR + + + +H F +
Sbjct: 242 VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNK----LLEHSFIK 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 163
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 291 ----HPFFQDVT 298
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI- 164
G + +F+ ++K+G G G VY A + G + A+K K L + + + REI
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREIS 57
Query: 165 -LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L L+HP + L T+ L+ EF DL + Y ++L
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
L + H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 159
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 192
Query: 245 LV---REDGHIMLSDF 257
L R + + L+DF
Sbjct: 193 LYTSKRPNAILKLTDF 208
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 294
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 295 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 341
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 139 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 198
Query: 245 LV---REDGHIMLSDF 257
L R + + L+DF
Sbjct: 199 LYTSKRPNAILKLTDF 214
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 157
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 163
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRGDGHGS-AVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + S AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 291 ----HPFFQDVT 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 32/129 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFE 451
HPFF+
Sbjct: 284 ----HPFFQ 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 159
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 158
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDHPFL 173
L+K+G G G VY A+ + G FA+K K L + + + T REI L L H +
Sbjct: 7 LEKIGEGTYGVVYKAQ-NNYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
LY T K L+ E DL L G S A F ++L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLL-QLLNGIAYCHDRR 120
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
V++RDLKP+N+L+ +G + ++DF L+ R F P
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA-RAFGIP 153
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 353 THE-----YLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVV 403
THE Y AP+++ G + + +D W+ G F E++ G F G + L F ++
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 404 GQP 406
G P
Sbjct: 218 GTP 220
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 245 LV---REDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
L R + + L+DF + L + P Y + P + P
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTP------YYVAPEVLGP 191
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 341 EPTSARSMSF-VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----- 394
E TS S++ T Y+APE++ + + + D W+ G+ Y LL G PF N
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 228
Query: 395 -NRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
+T + PE S +S K LIR LL +P +R+ TE HP+
Sbjct: 229 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW---- 280
Query: 454 NWALIRSTHPPEIP 467
+++ST P+ P
Sbjct: 281 ---IMQSTKVPQTP 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 245 LV---REDGHIMLSDF 257
L R + + L+DF
Sbjct: 149 LYTSKRPNAILKLTDF 164
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDHPFL 173
L+K+G G G VY A+ + G FA+K K L + + + T REI L L H +
Sbjct: 7 LEKIGEGTYGVVYKAQ-NNYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
LY T K L+ E DL L G S A F ++L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLL-QLLNGIAYCHDRR 120
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
V++RDLKP+N+L+ +G + ++DF L+ R F P
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA-RAFGIP 153
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 353 THE-----YLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVV 403
THE Y AP+++ G + + +D W+ G F E++ G F G + L F ++
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRIL 217
Query: 404 GQP 406
G P
Sbjct: 218 GTP 220
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 155
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 157
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 62
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 160
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 288 ----HPFFQDVT 295
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDHPFL 173
L+K+G G G VY A+ + G FA+K K L + + + T REI L L H +
Sbjct: 7 LEKIGEGTYGVVYKAQ-NNYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
LY T K L+ E DL L G S A F ++L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLL-QLLNGIAYCHDRR 120
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
V++RDLKP+N+L+ +G + ++DF L+ R F P
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA-RAFGIP 153
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 353 THE-----YLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVV 403
THE Y AP+++ G + + +D W+ G F E++ G F G + L F ++
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 404 GQP 406
G P
Sbjct: 218 GTP 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 341 EPTSARSMSF-VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----- 394
E TS S++ T Y+APE++ + + + D W+ G+ Y LL G PF N
Sbjct: 167 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 226
Query: 395 -NRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
+T + PE S +S K LIR LL +P +R+ TE HP+
Sbjct: 227 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW---- 278
Query: 454 NWALIRSTHPPEIP 467
+++ST P+ P
Sbjct: 279 ---IMQSTKVPQTP 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 147 LYTSKRPNAILKLTDFGFA 165
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 250 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 94 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 153
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 154 LYTSKRPNAILKLTDFGFA 172
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 157
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 149 LYTSKRPNAILKLTDFGFA 167
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLD 169
+F+ ++K+G G G VY A + G + A+K K L + + + REI L L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HP + L T+ L+ EF DL + Y ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 155
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 341 EPTSARSMSF-VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----- 394
E TS S++ T Y+APE++ + + + D W+ G+ Y LL G PF N
Sbjct: 173 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 232
Query: 395 -NRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
+T + PE S +S K LIR LL +P +R+ TE HP+
Sbjct: 233 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW---- 284
Query: 454 NWALIRSTHPPEIP 467
+++ST P+ P
Sbjct: 285 ---IMQSTKVPQTP 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 93 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 152
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 153 LYTSKRPNAILKLTDFGFA 171
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 341 EPTSARSMSF-VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----- 394
E TS S++ T Y+APE++ + + + D W+ G+ Y LL G PF N
Sbjct: 168 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 227
Query: 395 -NRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
+T + PE S +S K LIR LL +P +R+ TE HP+
Sbjct: 228 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW---- 279
Query: 454 NWALIRSTHPPEIP 467
+++ST P+ P
Sbjct: 280 ---IMQSTKVPQTP 290
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 88 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 147
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 148 LYTSKRPNAILKLTDFGFA 166
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 155
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 112 HFRLLKK-LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH 170
H LL LG G +V+ + G LFA+KV + ++ + + E E+L L+H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNH 66
Query: 171 PFLPTLYSHFE--TDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA--SEVLLAL 226
+ L++ E T + L+MEFC G L+T+ + +P + + F +V+ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGM 125
Query: 227 EYLHMMGVVYRDLKPENVL--VREDGHIM--LSDF 257
+L G+V+R++KP N++ + EDG + L+DF
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 348 MSFVGTHEYLAPE-----IIRGD---GHGSAVDWWTFGIFFYELLLGRTPFK----GNGN 395
+S GT EYL P+ ++R D +G+ VD W+ G+ FY G PF+ N
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 396 RETLFNVV-GQP 406
+E ++ ++ G+P
Sbjct: 233 KEVMYKIITGKP 244
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRGDGHGS-AVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + S AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 155
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 251 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 297
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 95 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 154
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 155 LYTSKRPNAILKLTDFGFA 173
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NRETLFNVVGQPLKF 409
Y+APE++ + + + D W+ G+ Y LL G PF N +T +
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
PE S +S K LIR LL +P +R+ TE HP+ +++ST P+ P
Sbjct: 259 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW-------IMQSTKVPQTP 305
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 103 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 162
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 163 LYTSKRPNAILKLTDFGFA 181
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ E DL T + Y ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 155
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 112 HFRLLKKLGCGDIGSVYLAELR----DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + + +LG G+ GSV L + G L A+K + +G + Q E +IL
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILKA 67
Query: 168 LDHPFLPTL--YSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
L F+ S+ + L+ME+ G L QR + Y+S++
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 126
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 112 HFRLLKKLGCGDIGSVYLAELR----DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + + +LG G+ GSV L + G L A+K + +G + Q E +IL
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILKA 68
Query: 168 LDHPFLPTL--YSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
L F+ S+ + L+ME+ G L QR + Y+S++
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 127
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 28/203 (13%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS---LLD 169
F+ L +LG G G V+ ++ G L+A+K + M R RA+ E+ S +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK---RSMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFSEQATRFYASEVLLALE 227
HP L +E L E C +L+Q G E Y + LLAL
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCG----PSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC--------------FVSPKLVQSS 273
+LH G+V+ D+KP N+ + G L DF L + +++P+L+Q S
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS 231
Query: 274 DDPACRISSYCIQPSCIDPACKL 296
A + S + + ++ AC +
Sbjct: 232 YGTAADVFSLGL--TILEVACNM 252
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 112 HFRLLKKLGCGDIGSVYLAELR----DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + + +LG G+ GSV L + G L A+K + +G + Q E +IL
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILKA 80
Query: 168 LDHPFLPTL--YSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
L F+ S+ + L+ME+ G L QR + Y+S++
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 139
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
+LG G G V+ E + G A+K + R ++ RA+ E + L P + LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 151
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ + ME GG L L + Q E +Y + L LEYLH +++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 238 DLKPENVLVREDG-HIMLSDF 257
D+K +NVL+ DG H L DF
Sbjct: 210 DVKADNVLLSSDGSHAALCDF 230
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKG--MLAGRKKLMRAQTEREILSLLDH 170
+ +++ +G G G V A R G A+K + ++ K+ +R E +IL H
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKH 113
Query: 171 PFL--------PTL-YSHFETDKFSCLLMEFCSGGDLH-TLRQRQPGKHFSEQATRFYAS 220
+ PT+ Y F++ LME DLH + QP + + R++
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---LTLEHVRYFLY 166
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
++L L+Y+H V++RDLKP N+LV E+ + + DF ++ SP
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 213
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 350 FVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
+V T Y APE++ + A+D W+ G F E+L R F G L ++ L
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL-QLIMMVLG 281
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKR 434
P + I + +R + P ++
Sbjct: 282 TPSPAVIQAVGAERVRAYIQSLPPRQ 307
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + LG G G V A L + K + +KL +E +L+ L+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKAR----NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY 63
Query: 173 LPTLYSHF-----------ETDKFSCLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
+ Y+ + K S L ME+C G L+ L + ++ R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF- 122
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++L AL Y+H G+++RDLKP N+ + E ++ + DF L+
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
S +GT Y+A E++ G GH +D ++ GI F+E++ PF R + L
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI-------L 238
Query: 408 KFPEGSSISF----------AAKDLIRGLLVKDPQKRLG 436
K SI F K +IR L+ DP KR G
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ +L +G G G + G + K +D G + +K M +E +L L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 173 LPTLYSHF--ETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEY 228
+ Y T+ ++ME+C GGDL ++ + + ++ E+ +++ LAL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 229 LHMMG-----VVYRDLKPENVLVREDGHIMLSDFDLS 260
H V++RDLKP NV + ++ L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+FVGT Y++PE + + D W+ G YEL PF +E
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG--------NRETLFNVVGQPL 407
Y+APE++ + + + D W+ G+ Y LL G PF N R G P
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP- 234
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
PE S +S AK LIR LL DP +RL T+ HP+
Sbjct: 235 -NPEWSEVSEDAKQLIRLLLKTDPTERLTI----TQFMNHPWI 272
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ ++ A+++LH + +RD+KPEN+
Sbjct: 81 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 140
Query: 245 LV---REDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
L +D + L+DF + + Q++ C + Y + P + P
Sbjct: 141 LYTSKEKDAVLKLTDFGF------AKETTQNALQTPC-YTPYYVAPEVLGP 184
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ +L +G G G + G + K +D G + +K M +E +L L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 173 LPTLYSHF--ETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEY 228
+ Y T+ ++ME+C GGDL ++ + + ++ E+ +++ LAL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 229 LHMMG-----VVYRDLKPENVLVREDGHIMLSDFDLS 260
H V++RDLKP NV + ++ L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+FVGT Y++PE + + D W+ G YEL PF +E
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
+LG G G V+ E + G A+K + R ++ RA+ E + L P + LY
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 132
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ + ME GG L L + Q E +Y + L LEYLH +++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 238 DLKPENVLVREDG-HIMLSDF 257
D+K +NVL+ DG H L DF
Sbjct: 191 DVKADNVLLSSDGSHAALCDF 211
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG--------NRETLFNVVGQPL 407
Y+APE++ + + + D W+ G+ Y LL G PF N R G P
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP- 253
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
PE S +S AK LIR LL DP +RL T+ HP+
Sbjct: 254 -NPEWSEVSEDAKQLIRLLLKTDPTERLTI----TQFMNHPWI 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ ++ A+++LH + +RD+KPEN+
Sbjct: 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 159
Query: 245 LV---REDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
L +D + L+DF + + Q++ C + Y + P + P
Sbjct: 160 LYTSKEKDAVLKLTDFGF------AKETTQNALQTPC-YTPYYVAPEVLGP 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ +L +G G G + G + K +D G + +K M +E +L L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 173 LPTLYSHF--ETDKFSCLLMEFCSGGDLHTL--RQRQPGKHFSEQATRFYASEVLLALEY 228
+ Y T+ ++ME+C GGDL ++ + + ++ E+ +++ LAL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 229 LHMMG-----VVYRDLKPENVLVREDGHIMLSDFDLS 260
H V++RDLKP NV + ++ L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
FVGT Y++PE + + D W+ G YEL PF +E
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKG--MLAGRKKLMRAQTEREILSLLDH 170
+ +++ +G G G V A R G A+K + ++ K+ +R E +IL H
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKH 112
Query: 171 PFL--------PTL-YSHFETDKFSCLLMEFCSGGDLH-TLRQRQPGKHFSEQATRFYAS 220
+ PT+ Y F++ LME DLH + QP + + R++
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---LTLEHVRYFLY 165
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
++L L+Y+H V++RDLKP N+LV E+ + + DF ++ SP
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 350 FVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
+V T Y APE++ + A+D W+ G F E+L R F G L ++ L
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL-QLIMMVLG 280
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKR 434
P + I + +R + P ++
Sbjct: 281 TPSPAVIQAVGAERVRAYIQSLPPRQ 306
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM-----DKGMLAGRKKLMRAQTEREI 164
+ + L+K+G G G+V+ A+ R+ + A+K + D+G+ + A E +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS------ALREICL 54
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
L L H + L+ +DK L+ EFC DL G + + + ++L
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEIVKSFLFQLLK 112
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS------LRCF 264
L + H V++RDLKP+N+L+ +G + L++F L+ +RC+
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 348 MSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
MS G + ++APE+IR D W++G+ +ELL G PF+G + V L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKRLGF 437
P S+ L+ DP R F
Sbjct: 232 ALPIPSTCPEPFAKLMEDCWNPDPHSRPSF 261
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM----DKGMLAGRKKLMRAQTER 162
++ L + +G G G VY A +G A+K D+ + + + + E
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDI---SQTIENVRQEA 57
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
++ ++L HP + L + CL+MEF GG L+ + GK +A ++
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQI 114
Query: 223 LLALEYLH---MMGVVYRDLKPENVLV 246
+ YLH ++ +++RDLK N+L+
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML-----AGRKKLMRAQTEREILSL 167
+ + LG G G V+ A ++ +K + K + KL + E ILS
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 168 LDHPFLPTLYSHFETDKFSCLLME-FCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
++H + + FE F L+ME SG DL R P E + +++ A+
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAV 143
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
YL + +++RD+K EN+++ ED I L DF
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+F GT EY APE++ G+ + G ++ W+ G+ Y L+ PF ET+ + P
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF--CELEETVEAAIHPPY 245
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATE--IKQHPFFESVNWALIRSTHPPE 465
+S L+ GLL P++R ++ T+ + Q W + + PE
Sbjct: 246 ------LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPE 299
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN 401
P ++ + VGT ++APE++ +G VD W+ GI E++ G P+ L+
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 402 VV--GQP-LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ G P L+ PE S F +D + L D +KR A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVEKR----GSAKELIQHQFLK 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMD------KGMLAGRKKLMRAQTEREILS 166
+ +K+G G G+VY A G A++ M+ K ++ +MR I++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD S+ D+ ++ME+ +GG L + E E L AL
Sbjct: 83 YLD--------SYLVGDEL-WVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQAL 130
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
E+LH V++R++K +N+L+ DG + L+DF
Sbjct: 131 EFLHSNQVIHRNIKSDNILLGMDGSVKLTDF 161
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 15/198 (7%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+++G G G+VY A + A+K M +K E L L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ + + L+ME+C G L + K E L L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFD-----------LSLRCFVSPKLVQSSDDPAC--R 279
+++RD+K N+L+ E G + L DF + +++P+++ + D+ +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 280 ISSYCIQPSCIDPACKLP 297
+ + + +CI+ A + P
Sbjct: 234 VDVWSLGITCIELAERKP 251
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 350 FVGTHEYLAPEIIRGDGHGS---AVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP 406
FVGT ++APE+I G VD W+ GI EL + P L+++
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 269
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ S ++ + L K PQ R
Sbjct: 270 SPALQSGHWSEYFRNFVDSCLQKIPQDR 297
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 112 HFRLLKKLGCGDIGSVYLAELR----DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + + +LG G+ GSV L + G L A+K + +G + Q E +IL
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILKA 64
Query: 168 LDHPFLPTL--YSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
L F+ S+ L+ME+ G L QR + Y+S++
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 123
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 15/198 (7%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F L+++G G G+VY A + A+K M +K E L L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ + + L+ME+C G L + K E L L YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFD-----------LSLRCFVSPKLVQSSDDPAC--R 279
+++RD+K N+L+ E G + L DF + +++P+++ + D+ +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 280 ISSYCIQPSCIDPACKLP 297
+ + + +CI+ A + P
Sbjct: 195 VDVWSLGITCIELAERKP 212
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 350 FVGTHEYLAPEIIRGDGHGS---AVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP 406
FVGT ++APE+I G VD W+ GI EL + P L+++
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 230
Query: 407 LKFPEGSSISFAAKDLIRGLLVKDPQKR 434
+ S ++ + L K PQ R
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIPQDR 258
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+K K L + + + REI L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ E DL + Y ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 159
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMD------KGMLAGRKKLMRAQTEREILS 166
+ +K+G G G+VY A G A++ M+ K ++ +MR I++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD S+ D+ ++ME+ +GG L + E E L AL
Sbjct: 82 YLD--------SYLVGDEL-WVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQAL 129
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
E+LH V++RD+K +N+L+ DG + L+DF
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN 401
P ++ + VGT ++APE++ +G VD W+ GI E++ G P+ L+
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 402 VV--GQP-LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ G P L+ PE S F +D + L D +KR A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVEKR----GSAKELLQHQFLK 274
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+ K L + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX---KIRLDTETEGVPSTAIREISLLKE 58
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSL 167
+ +F+ ++K+G G G VY A + G + A+ K L + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX---KIRLDTETEGVPSTAIREISLLKE 57
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
L+HP + L T+ L+ EF DL + Y ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
+ H V++RDLKP+N+L+ +G I L+DF L+ R F P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVP 155
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 351 VGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV---VGQP 406
V T Y APEI+ G + +AVD W+ G F E++ R F G+ + LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 407 LK---------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRGAT 442
+ FP+ + F+ + L+ +L DP KR+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 443 EIKQHPFFESVN 454
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 113 FRLLKKLGCGDIGSVYLA-ELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+ L + LG G + V+LA +LRD + A+KV+ + +R + E + + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDV-AVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 172 FLPTLYSHFETDK----FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
+ +Y E + ++ME+ G L + + G ++A A + AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIA-DACQALN 130
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ H G+++RD+KP N+L+ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIA 163
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ + +GT +YL+PE RGD + D ++ G YE+L G PF G+ + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 406 ----PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
P EG S A ++ L K+P+ R + A E++ + + +
Sbjct: 235 DPIPPSARHEGLSADLDA--VVLKALAKNPENRY---QTAAEMR-------ADLVRVHNG 282
Query: 462 HPPEIPK 468
PPE PK
Sbjct: 283 EPPEAPK 289
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMD------KGMLAGRKKLMRAQTEREILS 166
+ +K+G G G+VY A G A++ M+ K ++ +MR I++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD S+ D+ ++ME+ +GG L + E E L AL
Sbjct: 82 YLD--------SYLVGDEL-WVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQAL 129
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
E+LH V++RD+K +N+L+ DG + L+DF
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN 401
P ++ VGT ++APE++ +G VD W+ GI E++ G P+ L+
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 402 VV--GQP-LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ G P L+ PE S F +D + L D +KR A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVEKR----GSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMD------KGMLAGRKKLMRAQTEREILS 166
+ +K+G G G+VY A G A++ M+ K ++ +MR I++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD S+ D+ ++ME+ +GG L + E E L AL
Sbjct: 82 YLD--------SYLVGDEL-WVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQAL 129
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
E+LH V++RD+K +N+L+ DG + L+DF
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN 401
P ++ VGT ++APE++ +G VD W+ GI E++ G P+ L+
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 402 VV--GQP-LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ G P L+ PE S F +D + L D +KR A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVEKR----GSAKELLQHQFLK 274
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLA-ELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI-----L 165
+ + ++G G G V+ A +L++ G A+K + + ++ M T RE+ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 166 SLLDHPFLPTLY---SHFETDKFSCLLMEF-CSGGDLHTLRQRQPGKHFSEQATRFYASE 221
+HP + L+ + TD+ + L + F DL T + P + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+L L++LH VV+RDLKP+N+LV G I L+DF L+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
S V T Y APE++ + + VD W+ G F E+ + F+G+ + + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 406 P--------LKFPEG--------------SSISFAAKDLIRGLLVKDPQKRLGFKRGATE 443
P + P + I KDL+ L +P KR+ A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAYS 293
Query: 444 IKQHPFFESVN 454
HP+F+ +
Sbjct: 294 ALSHPYFQDLE 304
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGK-HFSEQATRFYASEVLLAL 226
L H + F + F + ME GG L L + + G +EQ FY ++L L
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 227 EYLHMMGVVYRDLKPENVLVRE-DGHIMLSDFDLSLR 262
+YLH +V+RD+K +NVL+ G + +SDF S R
Sbjct: 136 KYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 349 SFVGTHEYLAPEII-RG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP 406
+F GT +Y+APEII +G G+G A D W+ G E+ G+ PF G + VG
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 241
Query: 407 LKFPE-GSSISFAAKDLIRGLLVKDPQKR 434
PE S+S AK I DP KR
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMD------KGMLAGRKKLMRAQTEREILS 166
+ +K+G G G+VY A G A++ M+ K ++ +MR I++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
LD S+ D+ ++ME+ +GG L + E E L AL
Sbjct: 83 YLD--------SYLVGDEL-WVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQAL 130
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
E+LH V++RD+K +N+L+ DG + L+DF
Sbjct: 131 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 161
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN 401
P ++ VGT ++APE++ +G VD W+ GI E++ G P+ L+
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 402 VV--GQP-LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFE 451
+ G P L+ PE S F +D + L D +KR A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVEKR----GSAKELIQHQFLK 275
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ + +GT +YL+PE RGD + D ++ G YE+L G PF G+ + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 406 ----PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
P EG S A ++ L K+P+ R + A E++ + + +
Sbjct: 235 DPIPPSARHEGLSADLDA--VVLKALAKNPENRY---QTAAEMR-------ADLVRVHNG 282
Query: 462 HPPEIPK 468
PPE PK
Sbjct: 283 EPPEAPK 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 113 FRLLKKLGCGDIGSVYLA-ELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+ L + LG G + V+LA +LRD + A+KV+ + +R + E + + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDV-AVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 172 FLPTLYSHFETDK----FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
+ +Y E + ++ME+ G L + + G ++A A + AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIA-DACQALN 130
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ H G+++RD+KP N+++ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL--LDH 170
F+ ++ +G G G V+ A+ R G + +K R K + ERE+ +L LDH
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIK---------RVKYNNEKAEREVKALAKLDH 63
Query: 171 PFLPTL---YSHFETD-----------KFSCLL--MEFCSGGDLHTLRQRQPGKHFSEQA 214
+ + F+ D K CL MEFC G L +++ G+ +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
++ ++Y+H ++ RDLKP N+ + + + + DF L
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL 384
GT Y++PE I +G VD + G+ ELL
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGK-HFSEQATRFYASEVLLAL 226
L H + F + F + ME GG L L + + G +EQ FY ++L L
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 227 EYLHMMGVVYRDLKPENVLVRE-DGHIMLSDFDLSLR 262
+YLH +V+RD+K +NVL+ G + +SDF S R
Sbjct: 122 KYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR 158
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 349 SFVGTHEYLAPEII-RG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP 406
+F GT +Y+APEII +G G+G A D W+ G E+ G+ PF G + VG
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 227
Query: 407 LKFPE-GSSISFAAKDLIRGLLVKDPQKR 434
PE S+S AK I DP KR
Sbjct: 228 KVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 198 LHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
+ T Q+ G FSE+ ++ ++L L+Y+H GVV+RDLKP N+ V ED + + DF
Sbjct: 129 MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 188
Query: 258 DLS 260
L+
Sbjct: 189 GLA 191
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 34/143 (23%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A A +V T Y APE+I H VD W+ G E+L G+T FKG +
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 398 TL---FNVVGQP-----LKFPEGSSISF---------------------AAKDLIRGLLV 428
L V G P K + ++ S+ A DL+ +L
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309
Query: 429 KDPQKRLGFKRGATEIKQHPFFE 451
D KRL + T HPFFE
Sbjct: 310 LDVDKRLTAAQALT----HPFFE 328
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
L KLG G +VY + + L A+K + G A E +L L H + T
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP--CTAIREVSLLKDLKHANIVT 64
Query: 176 LYSHFETDKFSCLLMEFCSGGDLHTLRQRQP--GKHFSEQATRFYASEVLLALEYLHMMG 233
L+ T+K L+ E+ L+Q G + + + ++L L Y H
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLS 260
V++RDLKP+N+L+ E G + L+DF L+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLA 147
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 351 VGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y P+I+ G + + +D W G FYE+ GR F G+ E L F ++G P
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ + +GT +YL+PE RGD + D ++ G YE+L G PF G+ + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 406 ----PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
P EG S A ++ L K+P+ R + A E++ + + +
Sbjct: 235 DPIPPSARHEGLSADLDA--VVLKALAKNPENRY---QTAAEMR-------ADLVRVHNG 282
Query: 462 HPPEIPK 468
PPE PK
Sbjct: 283 EPPEAPK 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 113 FRLLKKLGCGDIGSVYLA-ELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+ L + LG G + V+LA +LRD + A+KV+ + +R + E + + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDV-AVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 172 FLPTLYSHFETDK----FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
+ +Y E + ++ME+ G L + + G ++A A + AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIA-DACQALN 130
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ H G+++RD+KP N+++ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 323
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 324 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 487
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 341 EPTSARSMSF-VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG----- 394
E TS S++ T Y+APE++ + + + D W+ G+ Y LL G PF N
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAIS 272
Query: 395 -NRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
+T PE S +S K LIR LL +P +R TE HP+
Sbjct: 273 PGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTI----TEFXNHPW---- 324
Query: 454 NWALIRSTHPPEIP 467
+ +ST P+ P
Sbjct: 325 ---IXQSTKVPQTP 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 187 CLLM--EFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL+ E GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 133 CLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENL 192
Query: 245 LV---REDGHIMLSDF 257
L R + + L+DF
Sbjct: 193 LYTSKRPNAILKLTDF 208
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D LRQ ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ + +GT +YL+PE RGD + D ++ G YE+L G PF G+ + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 406 ----PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
P EG S A ++ L K+P+ R + A E++ + + +
Sbjct: 235 DPIPPSARHEGLSADLDA--VVLKALAKNPENRY---QTAAEMR-------ADLVRVHNG 282
Query: 462 HPPEIPK 468
PPE PK
Sbjct: 283 EPPEAPK 289
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L + LG G + V+LA + A+KV+ + +R + E + + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 173 LPTLYSHFETDK----FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+ +Y E + ++ME+ G L + + G ++A A + AL +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIA-DACQALNF 131
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
H G+++RD+KP N+++ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLA-ELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI-----L 165
+ + ++G G G V+ A +L++ G A+K + + ++ M T RE+ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 166 SLLDHPFLPTLY---SHFETDKFSCLLMEF-CSGGDLHTLRQRQPGKHFSEQATRFYASE 221
+HP + L+ + TD+ + L + F DL T + P + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+L L++LH VV+RDLKP+N+LV G I L+DF L+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 29/128 (22%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
S V T Y APE++ + + VD W+ G F E+ + F+G+ + + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 406 P--------LKFPEG--------------SSISFAAKDLIRGLLVKDPQKRLGFKRGATE 443
P + P + I KDL+ L +P KR+ A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAYS 293
Query: 444 IKQHPFFE 451
HP+F+
Sbjct: 294 ALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLA-ELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI-----L 165
+ + ++G G G V+ A +L++ G A+K + + ++ M T RE+ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 166 SLLDHPFLPTLY---SHFETDKFSCLLMEF-CSGGDLHTLRQRQPGKHFSEQATRFYASE 221
+HP + L+ + TD+ + L + F DL T + P + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+L L++LH VV+RDLKP+N+LV G I L+DF L+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
S V T Y APE++ + + VD W+ G F E+ + F+G+ + + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 406 P--------LKFPEG--------------SSISFAAKDLIRGLLVKDPQKRLGFKRGATE 443
P + P + I KDL+ L +P KR+ A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAYS 293
Query: 444 IKQHPFFESVN 454
HP+F+ +
Sbjct: 294 ALSHPYFQDLE 304
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ + +GT +YL+PE RGD + D ++ G YE+L G PF G+ + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 406 ----PLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRST 461
P EG S A ++ L K+P+ R + A E++ + + +
Sbjct: 235 DPIPPSARHEGLSADLDA--VVLKALAKNPENRY---QTAAEMR-------ADLVRVHNG 282
Query: 462 HPPEIPK 468
PPE PK
Sbjct: 283 EPPEAPK 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L + LG G + V+LA + A+KV+ + +R + E + + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 173 LPTLYSHFETDK----FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+ +Y+ E + ++ME+ G L + + G ++A A + AL +
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIA-DACQALNF 131
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
H G+++RD+KP N+++ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ +++EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTL 176
K +G G G VY A+L D G L A+K + +G ++L +I+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHCNIVRL 78
Query: 177 YSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEYL 229
F + + + L++++ R K + Y ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 230 HMMGVVYRDLKPENVLVREDGHIM-LSDF 257
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ +++EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+KKLG G G V++ + + KV K + G + E ++ L H
Sbjct: 14 IKLVKKLGAGQFGEVWMGYYNN-----STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK 68
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
L LY+ ++ ++ EF + G L L+ + GK + F ++++ + Y+
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIER 127
Query: 232 MGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ NVLV E ++DF L+
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFP 410
++ APE I + W+FGI YE++ G+ P+ G N + + + + Q + P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM-SALSQGYRMP 230
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ +++EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 198 LHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
+ T Q+ G FSE+ ++ ++L L+Y+H GVV+RDLKP N+ V ED + + DF
Sbjct: 111 MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 170
Query: 258 DLS 260
L+
Sbjct: 171 GLA 173
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 34/143 (23%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A A +V T Y APE+I H VD W+ G E+L G+T FKG +
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 398 TL---FNVVGQP-----LKFPEGSSISF---------------------AAKDLIRGLLV 428
L V G P K + ++ S+ A DL+ +L
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291
Query: 429 KDPQKRLGFKRGATEIKQHPFFE 451
D KRL + T HPFFE
Sbjct: 292 LDVDKRLTAAQALT----HPFFE 310
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--- 164
+ + + ++G G G+VY A G A+K + + ++ + T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALL 57
Query: 165 --LSLLDHPFLPTLYSHFETDKFS-----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRF 217
L +HP + L T + L+ E DL T + P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 116
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ L L++LH +V+RDLKPEN+LV G + L+DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APE++ + + VD W+ G F E+ + F GN + L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--- 164
+ + + ++G G G+VY A G A+K + + ++ + T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALL 57
Query: 165 --LSLLDHPFLPTLYSHFETDKFS-----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRF 217
L +HP + L T + L+ E DL T + P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 116
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ L L++LH +V+RDLKPEN+LV G + L+DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APE++ + + VD W+ G F E+ + F GN + L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + LG G G V A L + K + +KL +E +L+ L+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKAR----NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY 63
Query: 173 LPTLYSHF-----------ETDKFSCLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
+ Y+ + K S L ME+C L+ L + ++ R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++L AL Y+H G+++RDLKP N+ + E ++ + DF L+
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
S +GT Y+A E++ G GH +D ++ GI F+E++ PF R + L
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI-------L 238
Query: 408 KFPEGSSISF----------AAKDLIRGLLVKDPQKRLG 436
K SI F K +IR L+ DP KR G
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM---DKGMLAGRKKLMRAQTEREILSLLD 169
F+L LG G G V A + G + A+K + DK + A +R E +IL
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKHFK 67
Query: 170 HPFLPTLYSHFETDKFS----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
H + T+++ D F +++ DLH + Q S+ +++ + L A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRA 124
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++ LH V++RDLKP N+L+ + + + DF L+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 37/146 (25%)
Query: 340 AEPTSARS--MSFVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
+EPT +S V T Y APE++ + A+D W+ G EL L R F G R
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 397 ETL---FNVVGQP--------LKFPEGSS-------------------ISFAAKDLIRGL 426
L F ++G P ++ P ++ DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 427 LVKDPQKRLGFKRGATEIKQHPFFES 452
LV DP KR+ A E +HP+ ++
Sbjct: 290 LVFDPAKRI----TAKEALEHPYLQT 311
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--- 164
+ + + ++G G G+VY A G A+K + + ++ + T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALL 57
Query: 165 --LSLLDHPFLPTLYSHFETDKFS-----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRF 217
L +HP + L T + L+ E DL T + P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 116
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ L L++LH +V+RDLKPEN+LV G + L+DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APE++ + + VD W+ G F E+ + F GN + L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM---DKGMLAGRKKLMRAQTEREILSLLD 169
F+L LG G G V A + G + A+K + DK + A +R E +IL
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKHFK 67
Query: 170 HPFLPTLYSHFETDKFS----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
H + T+++ D F +++ DLH + Q S+ +++ + L A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRA 124
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++ LH V++RDLKP N+L+ + + + DF L+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 37/146 (25%)
Query: 340 AEPTSARS--MSFVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
+EPT +S + FV T Y APE++ + A+D W+ G EL L R F G R
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 397 ETL---FNVVGQP--------LKFPEGSS-------------------ISFAAKDLIRGL 426
L F ++G P ++ P ++ DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 427 LVKDPQKRLGFKRGATEIKQHPFFES 452
LV DP KR+ A E +HP+ ++
Sbjct: 290 LVFDPAKRI----TAKEALEHPYLQT 311
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 15/174 (8%)
Query: 87 PHKGNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK 146
P N KW+ + D+ + H KLG G G VY + A+K + +
Sbjct: 5 PSSPNYDKWEMERT------DITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 53
Query: 147 GMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQP 206
+ + L A +EI HP L L + ++ EF + G+L +
Sbjct: 54 DTMEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 109
Query: 207 GKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ S + A+++ A+EYL ++RDL N LV E+ + ++DF LS
Sbjct: 110 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM---DKGMLAGRKKLMRAQTEREILSLLD 169
F+L LG G G V A + G + A+K + DK + A +R E +IL
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKHFK 67
Query: 170 HPFLPTLYSHFETDKFS----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLA 225
H + T+++ D F +++ DLH + Q S+ +++ + L A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRA 124
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++ LH V++RDLKP N+L+ + + + DF L+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 37/146 (25%)
Query: 340 AEPTSARS--MSFVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
+EPT +S +V T Y APE++ + A+D W+ G EL L R F G R
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 397 ETL---FNVVGQP--------LKFPEGSS-------------------ISFAAKDLIRGL 426
L F ++G P ++ P ++ DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 427 LVKDPQKRLGFKRGATEIKQHPFFES 452
LV DP KR+ A E +HP+ ++
Sbjct: 290 LVFDPAKRI----TAKEALEHPYLQT 311
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 76
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ +++EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS 159
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREIL---SLLD 169
++L++KLG G V+ A + +K ++ K + + + +REI +L
Sbjct: 39 YQLVRKLGRGKYSEVFEA--------INITNNEKVVVKILKPVKKNKIKREIKILENLRG 90
Query: 170 HPFLPTLYSHFE--TDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
P + TL + + L+ E + D L Q ++ RFY E+L AL+
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALD 145
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP 267
Y H MG+++RD+KP NV++ + H L D L F P
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHP 184
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTL 176
K +G G G VY A+L D G L A+K + +G ++L +I+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHCNIVRL 78
Query: 177 YSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEYL 229
F + + + L++++ R K + Y ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 230 HMMGVVYRDLKPENVLVREDGHIM-LSDF 257
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTL 176
K +G G G VY A+L D G L A+K + +G ++L +I+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHCNIVRL 78
Query: 177 YSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEYL 229
F + + + L++++ R K + Y ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 230 HMMGVVYRDLKPENVLVREDGHIM-LSDF 257
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 404
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 64
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 228
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 229 ECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 404
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 87 PHKGNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK 146
P N KW+ + D+ + H KLG G G VY + A+K + +
Sbjct: 5 PSSPNYDKWEMERT------DITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 53
Query: 147 GMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQP 206
+ + L A +EI HP L L + +++EF + G+L +
Sbjct: 54 DTMEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 109
Query: 207 GKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + + A+++ A+EYL ++RDL N LV E+ + ++DF LS
Sbjct: 110 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ME+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
F + LG G G V A L + K + +KL +E +L+ L+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKAR----NALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQY 63
Query: 173 LPTLYSHF-----------ETDKFSCLLM--EFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
+ Y+ + K S L + E+C L+ L + ++ R +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++L AL Y+H G+++R+LKP N+ + E ++ + DF L+
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 21/99 (21%)
Query: 349 SFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
S +GT Y+A E++ G GH +D ++ GI F+E + PF R + L
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNI-------L 238
Query: 408 KFPEGSSISF----------AAKDLIRGLLVKDPQKRLG 436
K SI F K +IR L+ DP KR G
Sbjct: 239 KKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPG 277
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 282
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + S + A+++ A+EYL ++R
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
+L N LV E+ + ++DF LS
Sbjct: 343 NLAARNCLVGENHLVKVADFGLS 365
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + +++E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK----GMLAGRK----KLMRAQTEREI 164
+R L+ +G G G+V A G A+K + + + A R +L++ +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 165 LSLLDHPFLPTLYSHFET-DKFS--CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASE 221
+ LLD +++ ET D F+ L+M F G DL L + + E +F +
Sbjct: 87 IGLLD------VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQ 136
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+L L Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 34/146 (23%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A + V T Y APE+I + VD W+ G E++ G+T FKG+ + +
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 398 TL---FNVVGQP----------------LK-FPEGSSISFA---------AKDLIRGLLV 428
L V G P +K PE FA A +L+ +LV
Sbjct: 234 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVN 454
D ++R+ A E HP+FES++
Sbjct: 294 LDAEQRV----TAGEALAHPYFESLH 315
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ--TEREILSLLDHPFLP 174
K +G GD G V LR G + V K + AG + R +E I+ DHP +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQR-DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
L + + ++ E+ G L T + G+ Q V + YL +G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG-VGAGMRYLSDLGY 172
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL NVLV + +SDF LS
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV 402
+ APE I SA D W+FG+ +E+L G P+ NR+ + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + +++E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ L + LG G + V+LA + A+KV+ + +R + E + + L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 173 LPTLYSHFETDK----FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+ +Y E + ++ME+ G L + + G ++A A + AL +
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIA-DACQALNF 148
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
H G+++RD+KP N+++ + + DF ++
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 180
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
++ + +GT +YL+PE RGD + D ++ G YE+L G PF G+ + V +
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
Query: 406 ----PLKFPEGSSISFAAKDLIRGLLVKDPQKR 434
P EG S A ++ L K+P+ R
Sbjct: 252 DPIPPSARHEGLSADLDA--VVLKALAKNPENR 282
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 67
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 68 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 231
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 232 ECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--LSLLDHPFLPTL 176
+G G G V +D G + A+K K + + K+++ REI L L H L L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK---KFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 177 YSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVY 236
+ K L+ EF L L G + Q + Y +++ + + H +++
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY--QVVQKYLFQIINGIGFCHSHNIIH 147
Query: 237 RDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
RD+KPEN+LV + G + L DF + R +P V D+ A R
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFA-RTLAAPGEV-YDDEVATR 188
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 351 VGTHEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
V T Y APE++ GD +G AVD W G E+ +G F G+ + + L++++
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ--TEREILSLLDHPFLP 174
K +G GD G V LR G + V K + AG + R +E I+ DHP +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQR-DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
L + + ++ E+ G L T + G+ Q V + YL +G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG-VGAGMRYLSDLGY 172
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL NVLV + +SDF LS
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV 402
+ APE I SA D W+FG+ +E+L G P+ NR+ + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL 155
D + K G L F +++K+G G G V L + D +A+KV+ R
Sbjct: 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAK 79
Query: 156 MRAQTEREILSLLDHPFLPTLY-SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
+ A ++I + + Y F CL+ E G L+ + R F +
Sbjct: 80 IEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIED 138
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
+ Y E+L AL YL M + + DLKPEN+L+
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILL 170
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
S + T +Y APE+I G + D W+FG EL G F+ + + E L
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 111 GHFRLLKKLGCG--DIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
G + LL +G G D+ +V LA + G ++ ++ + + + Q E + L
Sbjct: 9 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLF 67
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+HP + + F D ++ F + G L +E A + VL AL+Y
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLS 255
+H MG V+R +K ++L+ DG + LS
Sbjct: 128 IHHMGYVHRSVKASHILISVDGKVYLS 154
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 241 LVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 404
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 15/174 (8%)
Query: 87 PHKGNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK 146
P N KW+ + D+ + H KLG G G VY + A+K + +
Sbjct: 5 PSSPNYDKWEMERT------DITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 53
Query: 147 GMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQP 206
+ + L A +EI HP L L + ++ EF + G+L +
Sbjct: 54 DTMEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 109
Query: 207 GKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + + A+++ A+EYL ++RDL N LV E+ + ++DF LS
Sbjct: 110 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
L+Y+H +++RDLKP N+ V ED + + DF L
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 350 FVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI+ H VD W+ G ELL GRT F G + + L +VG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 406 P----LK-------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKR 439
P LK + ++FA A DL+ +LV D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 440 GATEIKQHPFF 450
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 76
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS 159
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 79
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 140 DLAARNCLVGENHLVKVADFGLS 162
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 105
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 264
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 154 KLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQ 213
+L+R + ++ L+D LY+ E + ++ME+C G + + P K F
Sbjct: 58 QLLRRLRHKNVIQLVD-----VLYN--EEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVC 109
Query: 214 ATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSS 273
Y +++ LEYLH G+V++D+KP N+L+ G + +S V+ L +
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALG------VAEALHPFA 163
Query: 274 DDPACRISS 282
D CR S
Sbjct: 164 ADDTCRTSQ 172
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 352 GTHEYLAPEIIRG--DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKF 409
G+ + PEI G G VD W+ G+ Y + G PF+G+ N LF +G+ +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKG-SY 230
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPP-EIPK 468
DL++G+L +P KR + +I+QH +F R HPP E P
Sbjct: 231 AIPGDCGPPLSDLLKGMLEYEPAKRFSIR----QIRQHSWF--------RKKHPPAEAPV 278
Query: 469 PV 470
P+
Sbjct: 279 PI 280
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
D+ + H KLG G G VY + A+K + + + + L A +EI
Sbjct: 14 DITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
HP L L + ++ EF + G+L + + + + A+++ A+
Sbjct: 67 --KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
EYL ++RDL N LV E+ + ++DF LS
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 63
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 64 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 227
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 228 ECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 111 GHFRLLKKLGCG--DIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
G + LL +G G D+ +V LA + G ++ ++ + + + Q E + L
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLF 83
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+HP + + F D ++ F + G L +E A + VL AL+Y
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLS 255
+H MG V+R +K ++L+ DG + LS
Sbjct: 144 IHHMGYVHRSVKASHILISVDGKVYLS 170
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 229
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 230 ECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 115
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 274
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKV-MDKGMLAGR-KKLMRAQTER 162
D D+ + +K+G G G+V+ AE G A+K+ M++ A R + +R E
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLR---EV 85
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF-YASE 221
I+ L HP + ++ E+ S G L+ L + + ++ R A +
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 222 VLLALEYLHMMG--VVYRDLKPENVLVREDGHIMLSDFDLS 260
V + YLH +V+RDLK N+LV + + + DF LS
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QPLK 408
GT E++APE++R + D ++FG+ +EL + P+ GN N + VG + L+
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLE 259
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGF 437
P + AA +I G +P KR F
Sbjct: 260 IPRNLNPQVAA--IIEGCWTNEPWKRPSF 286
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 164 DHE-HRKLRLIDWGLAEFYHP 183
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 88
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 149 DLAARNCLVGENHLVKVADFGLS 171
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 170 DHE-HRKLRLIDWGLAEFYHP 189
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 111
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 113
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 272
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 164 DHE-HRKLRLIDWGLAEFYHP 183
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 111
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 85
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 244
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+K+LG G G V++ + + KV K + G + E ++ L H
Sbjct: 15 IKLVKRLGAGQFGEVWMGYYNN-----STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLALEYLHM 231
L LY+ ++ ++ E+ + G L L+ + GK + F ++++ + Y+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIER 128
Query: 232 MGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ NVLV E ++DF L+
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFP 410
++ APE I D W+FGI YE++ G+ P+ G N + + + Q + P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM-TALSQGYRMP 231
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 82
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 241
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 163 DHE-HRKLRLIDWGLAEFYHP 182
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 89
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 96
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 255
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
L+ E + D L Q ++ RFY E+L AL+Y H MG+++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 247 REDGHIMLSDFDLSLRCFVSP 267
+ H L D L F P
Sbjct: 165 DHE-HRKLRLIDWGLAEFYHP 184
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 90
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 249
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQEAQ----VMKKLRHEK 241
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 242 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDL 259
V+RDL+ N+LV E+ ++DF L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGL 327
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 405
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 406 ECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 321
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
+L N LV E+ + ++DF LS
Sbjct: 382 NLAARNCLVGENHLVKVADFGLS 404
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 89
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 156
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 315
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S++ + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 78
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 237
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
H+ ++KLG G V L E G +A+K + + ++ AQ E ++ L +HP
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALK---RILCHEQQDREEAQREADMHRLFNHP 86
Query: 172 FLPTLYSHFETDKFS----CLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLA 225
+ L ++ ++ + LL+ F G L R + G +E + +
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDF 257
LE +H G +RDLKP N+L+ ++G +L D
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 81
Query: 176 LYSHFET------DKFSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + + L++++ R K + Y ++ +L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 240
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 34/192 (17%)
Query: 90 GNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML 149
G ++D+V+C + + + L K+G G G V+ A R G A+K K ++
Sbjct: 1 GPAKQYDSVECPFCDE----VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLM 53
Query: 150 AGRKK--LMRAQTEREILSLLDHPFLPTLY-------SHFETDKFSC-LLMEFCSGGDLH 199
K+ + A E +IL LL H + L S + K S L+ +FC DL
Sbjct: 54 ENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLA 112
Query: 200 TLRQRQPGKHFSEQATRFYASEV-------LLALEYLHMMGVVYRDLKPENVLVREDGHI 252
L S +F SE+ L L Y+H +++RD+K NVL+ DG +
Sbjct: 113 GL--------LSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL 164
Query: 253 MLSDFDLSLRCF 264
L+DF L+ R F
Sbjct: 165 KLADFGLA-RAF 175
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 86 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 138
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 293 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 329
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY + A+K + + + + L A +EI HP L L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 279
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ EF + G+L + + + + A+++ A+EYL ++R
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
+L N LV E+ + ++DF LS
Sbjct: 340 NLAARNCLVGENHLVKVADFGLS 362
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
++++G G G V+L + + A+K + +G ++ + E E++ L HP L
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 65
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY CL+ EF G L + Q G F+ + +V + YL V
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEASV 124
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV E+ I +SDF ++
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ +PE+ + S D W+FG+ +E+ G+ P++ N E + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++I H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKI----RHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
KLG G G VY+ + A+K + + + + L A +EI HP L L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 94
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ ++ E+ G+L + + + + A+++ A+EYL ++R
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 238 DLKPENVLVREDGHIMLSDFDLS 260
DL N LV E+ + ++DF LS
Sbjct: 155 DLAARNCLVGENHVVKVADFGLS 177
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + K ++ ++ +L++ +
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 96 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 148
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 303 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 339
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 94 KWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRK 153
++D+V+C + + + L K+G G G V+ A R G A+K K ++ K
Sbjct: 5 QYDSVECPFCDE----VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEK 57
Query: 154 K--LMRAQTEREILSLLDHPFLPTLY-------SHFETDKFSC-LLMEFCSGGDLHTLRQ 203
+ + A E +IL LL H + L S + K S L+ +FC DL L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLS 116
Query: 204 RQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
K F+ + +L L Y+H +++RD+K NVL+ DG + L+DF L+ R
Sbjct: 117 NVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RA 174
Query: 264 F 264
F
Sbjct: 175 F 175
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 90 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 142
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 297 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 333
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K +G G G VY A+L D G L A+K V+ R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 176 LYSHFETDK------FSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEY 228
L F + + L++++ R K + Y ++ +L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 229 LHMMGVVYRDLKPENVLVREDGHIM-LSDF 257
+H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 347 SMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVV 403
++S + + Y APE+I G + S++D W+ G ELLLG+ F G+ + L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 89 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 141
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 296 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 332
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 89 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 141
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 296 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 332
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 8/154 (5%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
DL LG +++G G+ G V+ LR L A+K + + K + E IL
Sbjct: 115 DLVLG-----EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILK 167
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
HP + L + ++ME GGD T R G + + +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGM 226
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
EYL ++RDL N LV E + +SDF +S
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
++ APE + + S D W+FGI +E LG +P+ N++T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 95 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 147
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 301
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 302 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 338
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 94 KWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRK 153
++D+V+C + + + L K+G G G V+ A R G A+K K ++ K
Sbjct: 5 QYDSVECPFCDE----VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEK 57
Query: 154 K--LMRAQTEREILSLLDHPFLPTLY-------SHFETDKFSC-LLMEFCSGGDLHTLRQ 203
+ + A E +IL LL H + L S + K S L+ +FC DL L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLS 116
Query: 204 RQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
K F+ + +L L Y+H +++RD+K NVL+ DG + L+DF L+ R
Sbjct: 117 NVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RA 174
Query: 264 F 264
F
Sbjct: 175 F 175
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 82 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 134
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 228
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 229 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 288
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 289 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 325
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ S G L + + GK+ A+++ + Y+ M
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 238
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ KDP++R F+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 40/178 (22%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL--LDH 170
F+ ++ +G G G V+ A+ R G + ++ R K + ERE+ +L LDH
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIR---------RVKYNNEKAEREVKALAKLDH 64
Query: 171 ---------------------------PFLPTLYSHFETDKFSCLL--MEFCSGGDLHTL 201
+ P + K CL MEFC G L
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 202 RQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+++ G+ + ++ ++Y+H +++RDLKP N+ + + + + DF L
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL 384
GT Y++PE I +G VD + G+ ELL
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 8/154 (5%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
DL LG +++G G+ G V+ LR L A+K + + K + E IL
Sbjct: 115 DLVLG-----EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILK 167
Query: 167 LLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLAL 226
HP + L + ++ME GGD T R G + + +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGM 226
Query: 227 EYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
EYL ++RDL N LV E + +SDF +S
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
++ APE + + S D W+FGI +E LG +P+ N++T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 81 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 133
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 287
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 288 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 324
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ + G L + + GK+ ++++ + Y+ M
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 235
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKV-MDKGMLAGR-KKLMRAQTER 162
D D+ + +K+G G G+V+ AE G A+K+ M++ A R + +R E
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLR---EV 85
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF-YASE 221
I+ L HP + ++ E+ S G L+ L + + ++ R A +
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 222 VLLALEYLHMMG--VVYRDLKPENVLVREDGHIMLSDFDLS 260
V + YLH +V+R+LK N+LV + + + DF LS
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG-- 404
S S GT E++APE++R + D ++FG+ +EL + P+ GN N + VG
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFK 254
Query: 405 -QPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF 437
+ L+ P + AA +I G +P KR F
Sbjct: 255 CKRLEIPRNLNPQVAA--IIEGCWTNEPWKRPSF 286
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
++++G G G V+L + + A+K + +G ++ + E E++ L HP L
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 68
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY CL+ EF G L + Q G F+ + +V + YL V
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 127
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV E+ I +SDF ++
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMT 153
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ +PE+ + S D W+FG+ +E+ G+ P++ N E + ++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 91 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 143
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T+ +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 429 KDPQKRLGFKRGATEIKQHPFF 450
D KR+ A + H +F
Sbjct: 298 LDSDKRI----TAAQALAHAYF 315
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 80 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 132
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 287 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 323
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VG Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 267 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 320
Query: 447 HPFFE 451
HP+ +
Sbjct: 321 HPYVQ 325
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
++++G G G V+L + + A+K + +G ++ + E E++ L HP L
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 65
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY CL+ EF G L + Q G F+ + +V + YL V
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 124
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV E+ I +SDF ++
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ +PE+ + S D W+FG+ +E+ G+ P++ N E + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNG------NR 396
TS R + + ++ + G+ + + D W+ G+ Y LL G PF N
Sbjct: 151 TSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 210
Query: 397 ETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA 456
+T + PE S +S K LIR LL +P +R+ TE HP+
Sbjct: 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPW------- 259
Query: 457 LIRSTHPPEIP 467
+++ST P+ P
Sbjct: 260 IMQSTKVPQTP 270
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 187 CLL--MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENV 244
CLL ME GG+L + Q + + F+E+ + A++YLH + + +RD+KPEN+
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 245 LV---REDGHIMLSDFDLS 260
L R + + L+DF +
Sbjct: 149 LYTSKRPNAILKLTDFGFA 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 86 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 138
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 293 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 329
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 20/125 (16%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VGT Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 267 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 320
Query: 447 HPFFE 451
HP+ +
Sbjct: 321 HPYVQ 325
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 107 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 159
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 313
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 314 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 350
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 20/125 (16%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VGT Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 267 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 320
Query: 447 HPFFE 451
HP+ +
Sbjct: 321 HPYVQ 325
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 81 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 133
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 287
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 288 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 324
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
++++G G G V+L + + A+K + +G ++ + E E++ L HP L
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 63
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY CL+ EF G L + Q G F+ + +V + YL V
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 122
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV E+ I +SDF ++
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMT 148
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ +PE+ + S D W+FG+ +E+ G+ P++ N E + ++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 86 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 138
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 293 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 329
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 103 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 155
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 309
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 310 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 346
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
RL KLG G G V++ A+K + G ++ L AQ ++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ + G L + + GK+ ++++ + Y+ M
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGS 413
++ APE D W+FGI EL GR P+ G NRE L + V + + P
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPP 235
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
+ DL+ K+P++R F+
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV + G A+K + + ++ ++ +L++ +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 113 IGLLD-VFTPATSLEEFNDVY---LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 165
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 34/142 (23%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGN---G 394
+A T +V T Y APEI+ H VD W+ G ELL GRT F G
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 395 NRETLFNVVGQP-----------------LKFPEGSSISFA---------AKDLIRGLLV 428
+ + + G P P+ +FA A DL+ +LV
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLV 319
Query: 429 KDPQKRLGFKRGATEIKQHPFF 450
D KR+ A+E HP+F
Sbjct: 320 LDTDKRI----TASEALAHPYF 337
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 86 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 138
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 293 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 329
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 90 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 142
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 297 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 333
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPTDQSF 327
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 91 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 143
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T+ +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 429 KDPQKRLGFKRGATEIKQHPFF 450
D KR+ A + H +F
Sbjct: 298 LDSDKRI----TAAQALAHAYF 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 95 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 147
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 301
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 302 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 338
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 94 KWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRK 153
++D+V+C + + + L K+G G G V+ A R G A+K K ++ K
Sbjct: 4 QYDSVECPFCDE----VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEK 56
Query: 154 K--LMRAQTEREILSLLDHPFLPTLY-------SHFETDKFSC-LLMEFCSGGDLHTLRQ 203
+ + A E +IL LL H + L S + K S L+ +FC DL L
Sbjct: 57 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLS 115
Query: 204 RQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC 263
K F+ + +L L Y+H +++RD+K NVL+ DG + L+DF L+ R
Sbjct: 116 NVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RA 173
Query: 264 F 264
F
Sbjct: 174 F 174
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP 406
L +VG P
Sbjct: 231 QLKLILRLVGTP 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 104 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 156
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 311 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 347
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 96 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 148
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 303 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 339
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 90 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 142
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 297 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 333
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 96 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 148
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 303 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 339
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 11 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 68
Query: 173 --LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 125
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 126 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 154
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 20/125 (16%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VGT Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 220 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 273
Query: 447 HPFFE 451
HP+ +
Sbjct: 274 HPYVQ 278
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 91 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 143
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 65/169 (38%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T+ +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 298 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 334
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP 406
L +VG P
Sbjct: 231 QLKLILRLVGTP 242
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 91 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 143
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 298 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 334
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 89 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 141
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 296 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 332
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPFDQSF 327
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 83 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 135
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 229
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 230 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 289
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 290 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 326
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
++++G G G V+L + + A+K + +G ++ + E E++ L HP L
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 66
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY CL+ EF G L + Q G F+ + +V + YL V
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 125
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV E+ I +SDF ++
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMT 151
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ +PE+ + S D W+FG+ +E+ G+ P++ N E + ++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 89 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 141
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 296 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 332
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 107 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 159
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 313
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 314 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 350
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
DLG + LK LGCG G V+ A D A+K K +L + + A E +I+
Sbjct: 8 DLG-SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIR 63
Query: 167 LLDHPFLPTLYSHFE-------------TDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQ 213
LDH + ++ T+ S +++ DL + ++ P E+
Sbjct: 64 RLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEE 120
Query: 214 ATRFYASEVLLALEYLHMMGVVYRDLKPENVLVR-EDGHIMLSDFDLS 260
R + ++L L+Y+H V++RDLKP N+ + ED + + DF L+
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 353 THEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
T Y +P ++ + + A+D W G F E+L G+T F G E +
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM 234
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 14 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 71
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 128
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 129 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 157
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VGT Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 163 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 223 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 276
Query: 447 HPFFESVNWALIRSTHP 463
HP+ + THP
Sbjct: 277 HPYVQI-------QTHP 286
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 80 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 132
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T FV T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 287 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 323
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 80 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 132
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 287 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 323
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 103 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 155
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 309
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 310 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 346
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 30 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 20/125 (16%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VGT Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 239 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 292
Query: 447 HPFFE 451
HP+ +
Sbjct: 293 HPYVQ 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 30 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 27/129 (20%)
Query: 349 SFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTPFKGNGNRE 397
S VGT Y+ PE I R +G + D W+ G Y + G+TPF+ N+
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 398 TLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
+ + + P ++FP+ +D+++ L +DP++R+ E+ HP+ +
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLAHPYVQI-- 298
Query: 455 WALIRSTHP 463
THP
Sbjct: 299 -----QTHP 302
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 104 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 156
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 311 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 347
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 90 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 142
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 297 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 333
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 104 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 156
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 311 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 347
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
L ++G G G+VY + + +KV+D ++ + E +L H +
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVD----PTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF-------YASEVLLALE 227
+ D + ++ ++C G L+ KH Q T+F A + ++
Sbjct: 96 LFMGYMTKDNLA-IVTQWCEGSSLY--------KHLHVQETKFQMFQLIDIARQTAQGMD 146
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
YLH +++RD+K N+ + E + + DF L+
Sbjct: 147 YLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIRGDGHGS---AVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + D +++GI YEL+ G P+ NR+ + +VG+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 256 SPDLSKL 262
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 94 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 146
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 240
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 241 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 300
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 301 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 337
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T FV T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK++G G V+ L + ++A+K ++ A + L + E L+ L
Sbjct: 10 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 67
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
+ LY + TD++ ++ME C DL++ +++ K + Y +L A+ +H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 124
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 125 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 153
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 341 EPTSARSMSFVGTHEYLAPEII------RGDGHGSAV-----DWWTFGIFFYELLLGRTP 389
+ TS S VGT Y+ PE I R +G + D W+ G Y + G+TP
Sbjct: 159 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
Query: 390 FKGNGNRETLFNVVGQP---LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
F+ N+ + + + P ++FP+ +D+++ L +DP++R+ E+
Sbjct: 219 FQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLA 272
Query: 447 HPFFESVNWALIRSTHP 463
HP+ + THP
Sbjct: 273 HPYVQI-------QTHP 282
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T FV T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+K+LG G G V++ + A+K + G ++ L AQ I+ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTW-NGNTKVAIKTLKPGTMSPESFLEEAQ----IMKKLKHDK 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ + ++ E+ + G L + G+ A++V + Y+ M
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDP 292
++RDL+ N+LV ++DF L+ +L++ ++ A + + + I+ + +
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA-------RLIEDNEXTARQGAKFPIKWTAPEA 177
Query: 293 A 293
A
Sbjct: 178 A 178
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV-VGQPLKFPEG 412
++ APE D W+FGI EL+ GR P+ G NRE L V G + P+
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD 230
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFK 438
IS +L+ KDP++R F+
Sbjct: 231 CPISL--HELMIHCWKKDPEERPTFE 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
++++G G G V+L + + A+K + +G ++ + E E++ L HP L
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFI----EEAEVMMKLSHPKLV 85
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY CL+ EF G L + Q G F+ + +V + YL V
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 144
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV E+ I +SDF ++
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ +PE+ + S D W+FG+ +E+ G+ P++ N E + ++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQAFKNEV 71
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 72 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHASETKFEMKKL 122
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 409 FPEGSSISF----AAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
P+ S + K L+ L K +R F R EI++
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAEL-----RDMGCLFAMKVMDKGMLA 150
DA + ++ + + L K LG G+ G V A R A+K++ + A
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--A 65
Query: 151 GRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTL----RQRQP 206
+L +E +L ++HP + LY D L++E+ G L R+ P
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 207 G-------------KHFSEQATRF-----YASEVLLALEYLHMMGVVYRDLKPENVLVRE 248
G H E+A +A ++ ++YL M +V+RDL N+LV E
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAE 185
Query: 249 DGHIMLSDFDLSLRCFVSPKLVQSS 273
+ +SDF LS + V+ S
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRS 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 70
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+MEF G L Q+ + Y S++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRN--LKLIMEFLPYGSLREYLQKHKER-IDHIKLLQYTSQIC 127
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+FR+ KK+GCG+ G + L + A+K+ A + L R L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGD 65
Query: 172 FLPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+P +Y K++ +++E S DL L R FS + A +++ +EY+
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEYV 121
Query: 230 HMMGVVYRDLKPENVLVREDGH-----IMLSDFDLSLRCFVSPK 268
H ++YRD+KPEN L+ G+ I + DF L+ + ++ P+
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA-KEYIDPE 164
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQAFKNEV 59
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 60 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHASETKFEMKKL 110
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 409 FPEGSSISF----AAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
P+ S + K L+ L K +R F R EI++
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 344 SARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
S +++++ + Y APE+I G+ H +AVD W+ G F E++LG F+G+ + L +
Sbjct: 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
Query: 403 V 403
V
Sbjct: 245 V 245
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
+ F++ + G G G+V L + + G A+K + + ++L Q L++L
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD----LAVLH 77
Query: 170 HPFLPTLYSHFET-------DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQAT------R 216
HP + L S+F T D + ++ME+ LH R ++ Q +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LH----RCCRNYYRRQVAPPPILIK 132
Query: 217 FYASEVLLALEYLHM--MGVVYRDLKPENVLVRE-DGHIMLSDF 257
+ +++ ++ LH+ + V +RD+KP NVLV E DG + L DF
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+FR+ KK+GCG+ G ELR L+ + + + + + + E L
Sbjct: 5 NFRVGKKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSAT 59
Query: 172 -FLPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+P +Y K++ +++E S DL L R F+ + A +++ +EY
Sbjct: 60 EGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLITRMEY 115
Query: 229 LHMMGVVYRDLKPENVLVREDGH-----IMLSDFDLSLRCFVSPK 268
+H ++YRD+KPEN LV G I + DF L+ + ++ P+
Sbjct: 116 VHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA-KEYIDPE 159
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 45/173 (26%)
Query: 335 LPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGN 393
L +A T +V T Y APEI+ H VD W+ G ELL GRT F G
Sbjct: 167 LDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 394 GNRETL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIR 424
+ + L +VG P LK + ++FA A DL+
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE 286
Query: 425 GLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
+LV D KR+ A + H +F H P+ + P D SF
Sbjct: 287 KMLVLDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 29/182 (15%)
Query: 98 VQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG-----CLFAMKVMDKGMLAGR 152
VQ +K +D L ++LG G G V+LAE ++ L A+K + LA R
Sbjct: 9 VQHIKRRD-------IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR 61
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--------- 203
K R E E+L+ L H + Y ++ E+ GDL+ +
Sbjct: 62 KDFQR---EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 204 -----RQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFD 258
RQ AS++ + YL V+RDL N LV + + + DF
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 259 LS 260
+S
Sbjct: 179 MS 180
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 351 VGTH-----EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVV- 403
VG H ++ PE I + D W+FG+ +E+ G+ P+ N E + +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 404 GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFK 438
G+ L+ P D++ G ++PQ+RL K
Sbjct: 251 GRVLERPRVCPKE--VYDVMLGCWQREPQQRLNIK 283
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + D+ L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGM--LAGRKKLMRAQTEREILSLLDHPFLPTL 176
+G G G VYLA ++ A+K +++ L K+++R T IL+ L ++ L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 90
Query: 177 YSHFETD---KFSCLLMEF-CSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
Y D KF L + + DL L + +E+ + +LL ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES 148
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
G+++RDLKP N L+ +D + + DF L+
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A +G A+K + + + RA E +L ++
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVN 81
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + +L + F K L+ME + + S + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS-----YLLYQML 136
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 44/141 (31%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGN-------------- 395
+V T Y APE+I G G+ + VD W+ G EL+ G F+G +
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 396 --------RETLFNVVGQPLKFP-----------------EGSSISFA-AKDLIRGLLVK 429
+ T+ N V K+P E I + A+DL+ +LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 430 DPQKRLGFKRGATEIKQHPFF 450
DP KR+ E +HP+
Sbjct: 305 DPDKRI----SVDEALRHPYI 321
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAEL-----RDMGCLFAMKVMDKGMLA 150
DA + ++ + + L K LG G+ G V A R A+K++ + A
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--A 65
Query: 151 GRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTL----RQRQP 206
+L +E +L ++HP + LY D L++E+ G L R+ P
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 207 G-------------KHFSEQATRF-----YASEVLLALEYLHMMGVVYRDLKPENVLVRE 248
G H E+A +A ++ ++YL M +V+RDL N+LV E
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 249 DGHIMLSDFDLSLRCFVSPKLVQSS 273
+ +SDF LS + V+ S
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRS 210
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+FR+ KK+GCG+ G + L + A+K+ A + L R L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGD 65
Query: 172 FLPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+P +Y K++ +++E S DL L R FS + A +++ +EY+
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEYV 121
Query: 230 HMMGVVYRDLKPENVLVREDGH-----IMLSDFDLSLRCFVSPK 268
H ++YRD+KPEN L+ G+ I + DF L+ + ++ P+
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA-KEYIDPE 164
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAEL-----RDMGCLFAMKVMDKGMLA 150
DA + ++ + + L K LG G+ G V A R A+K++ + A
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--A 65
Query: 151 GRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTL----RQRQP 206
+L +E +L ++HP + LY D L++E+ G L R+ P
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 207 G-------------KHFSEQATRF-----YASEVLLALEYLHMMGVVYRDLKPENVLVRE 248
G H E+A +A ++ ++YL M +V+RDL N+LV E
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 249 DGHIMLSDFDLSLRCFVSPKLVQSS 273
+ +SDF LS + V+ S
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRS 210
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
++ + +G G+ G V L+ G A+K + G +++ E I+ D
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC--EASIMGQFD 102
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HP + L K +++EF G L ++ G+ Q + + YL
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG-IAAGMRYL 161
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSS 273
MG V+RDL N+LV + +SDF LS P+ V ++
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 157 RAQTEREILSLLDHPF---LPTLYSHFETDKFSCL-LMEFCSGGDLHTLRQRQPGKHFSE 212
R E +L+ HP L ++ HFE L L+ DL + Q S
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISP 133
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q +++ +LL L LH GVV+RDL P N+L+ ++ I + DF+L+
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
KD + +RL LG G G+V+ A+KV+ + + G L + T
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 164 ILSLL-------DHPFLPTLYSHFETDK-FSCLLMEFCSGGDLHT-LRQRQPGKHFSEQA 214
++LL HP + L FET + F +L DL + ++ P E
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGP 140
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
+R + +V+ A+++ H GVV+RD+K EN+L+
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 350 FVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE I R H W+ GI Y+++ G PF+ + ++ L
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELH 251
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKR 434
FP S A LIR L P R
Sbjct: 252 FPAHVSPDCCA--LIRRCLAPKPSSR 275
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 157 RAQTEREILSLLDHPF---LPTLYSHFETDKFSCL-LMEFCSGGDLHTLRQRQPGKHFSE 212
R E +L+ HP L ++ HFE L L+ DL + Q S
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISP 133
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q +++ +LL L LH GVV+RDL P N+L+ ++ I + DF+L+
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHP 171
+FR+ KK+GCG+ G + L + A+K+ A + L R L
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGD 86
Query: 172 FLPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+P +Y K++ +++E S DL L R FS + A +++ +EY+
Sbjct: 87 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEYV 142
Query: 230 HMMGVVYRDLKPENVLVREDGH-----IMLSDFDLSLRCFVSPK 268
H ++YRD+KPEN L+ G+ I + DF L+ + ++ P+
Sbjct: 143 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA-KEYIDPE 185
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
+LG G G V+ + + G A+K + R ++ R + E + L P + LY
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVE-ELVACAGLSSPRIVPLY 130
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ + ME GG L L ++ E +Y + L LEYLH +++
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 238 DLKPENVLVREDG-HIMLSDFDLSL 261
D+K +NVL+ DG L DF +L
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHAL 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTL 176
K +G G G V+ A+L + + KV+ R E +I+ ++ HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDL 97
Query: 177 YSHFETDK------FSCLLMEFCSGGDLHTLRQRQPGKH-FSEQATRFYASEVLLALEYL 229
+ F ++ F L++E+ R K + Y ++L +L Y+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 230 HMMGVVYRDLKPENVLVR-EDGHIMLSDF 257
H +G+ +RD+KP+N+L+ G + L DF
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 37/163 (22%)
Query: 334 SLPVLIA-EPTSARSMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFK 391
S +LIA EP ++S + + Y APE+I G + + +D W+ G EL+ G+ F
Sbjct: 188 SAKILIAGEP----NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243
Query: 392 GNGNRETLFNVV---GQPL--------------KFPEGSSISFA----------AKDLIR 424
G + L ++ G P KFP+ F+ A DLI
Sbjct: 244 GESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLIS 303
Query: 425 GLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPEIP 467
LL P RL A E HPFF+ + R + E+P
Sbjct: 304 RLLEYTPSARL----TAIEALCHPFFDELRTGEARMPNGRELP 342
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A +G A+K + + + RA E +L ++
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVN 79
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + +L + F K L+ME + + S + ++L
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS-----YLLYQML 134
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
+V T Y APE+I G G+ VD W+ G EL+ G F+G + + V+ Q
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 108 LGLGHFRL-------LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
LG G + + LK+LG G G V + R + A+K++ +G ++ + + A+
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK- 71
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGG-DLHTLRQRQPGKHFSEQATRFYA 219
++ L H L LY + ++ E+ + G L+ LR+ + F Q
Sbjct: 72 ---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMC 126
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+V A+EYL ++RDL N LV + G + +SDF LS
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 359 PEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
PE++ S D W FG+ +E+ LG+ P++ N ET
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 108 LGLGHFRL-------LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQT 160
LG G + + LK+LG G G V + R + A+K++ +G ++ + + A+
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK- 71
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGG-DLHTLRQRQPGKHFSEQATRFYA 219
++ L H L LY + ++ E+ + G L+ LR+ + F Q
Sbjct: 72 ---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMC 126
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+V A+EYL ++RDL N LV + G + +SDF LS
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 359 PEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
PE++ S D W FG+ +E+ LG+ P++ N ET
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 106 GDLGLGH---------FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLM 156
G GLG+ LK+LG G G V + R + A+K++ +G ++ + +
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIE 59
Query: 157 RAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGG-DLHTLRQRQPGKHFSEQAT 215
A+ ++ L H L LY + ++ E+ + G L+ LR+ + F Q
Sbjct: 60 EAK----VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQL 113
Query: 216 RFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+V A+EYL ++RDL N LV + G + +SDF LS
Sbjct: 114 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 359 PEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
PE++ S D W FG+ +E+ LG+ P++ N ET
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + +LL+ +G G+ G V L + R G A+K + A E +++
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA-----QAFLAEASVMTQ 242
Query: 168 LDHPFLPTLYSHFETDKFSC-LLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLA 225
L H L L +K ++ E+ + G L LR R + +F + +V A
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEA 301
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 14/68 (20%)
Query: 337 VLIAEPTSARSMSFVGTHE-------------YLAPEIIRGDGHGSAVDWWTFGIFFYEL 383
VL++E A+ F T E + APE +R + D W+FGI +E+
Sbjct: 320 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
Query: 384 L-LGRTPF 390
GR P+
Sbjct: 380 YSFGRVPY 387
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 74
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 75 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 131
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL 155
DA + DG + +G +++G G G+VY + + + V ++L
Sbjct: 14 DAADDWEIPDGQITVG-----QRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQL 64
Query: 156 MRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQAT 215
+ E +L H + L+ + T ++ ++C G L+ H T
Sbjct: 65 QAFKNEVGVLRKTRHVNI-LLFMGYSTAPQLAIVTQWCEGSSLY--------HHLHASET 115
Query: 216 RF-------YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+F A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 409 FPEGSSISF----AAKDLIRGLLVKDPQKRLGFKRGATEIKQ 446
P+ S + K L+ L K +R F R EI++
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + ++ +F ++L
Sbjct: 80 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVK---CAKLTDDHVQFLIYQILR 132
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + DF L+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 287 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 323
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGM--LAGRKKLMRAQTEREILSLLDHPFLPTL 176
+G G G VYLA ++ A+K +++ L K+++R T IL+ L ++ L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 92
Query: 177 YSHF---ETDKFSCLLMEF-CSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
+ + KF L + + DL L + +EQ + +LL +++H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEQHVKTILYNLLLGEKFIHES 150
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDD 275
G+++RDLKP N L+ +D + + DF L+ R S K + +D
Sbjct: 151 GIIHRDLKPANCLLNQDCSVKICDFGLA-RTINSDKDIHIVND 192
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 72
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 73 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 129
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK +G G G V A + A+K M+ K+ R E + +L+H
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALK-----MVRNEKRFHRQAAEE--IRILEHLR 151
Query: 171 -------PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ + +F C+ E S +L+ L ++ + FS R +A +L
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF 264
L+ LH +++ DLKPEN+L+++ G + D C+
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLG 386
R + + + Y APE+I G +G +D W+ G ELL G
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 256 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 114 RLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF- 172
R+ KK+GCG+ G ELR L+ + + + + + + E L
Sbjct: 3 RVGKKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGE 57
Query: 173 -LPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
LP +Y K++ +++E S DL L R F+ + A ++L +EY+
Sbjct: 58 GLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYV 113
Query: 230 HMMGVVYRDLKPENVLVREDGH-----IMLSDFDLSLRCFVSPK 268
H ++YRD+KPEN L+ G+ I + DF L+ + ++ P+
Sbjct: 114 HSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA-KEYIDPE 156
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 256 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLH-TLRQRQPGKHFSEQATRFY 218
E LS ++HP + LY CL+ME+ GG L+ L +P +++ +
Sbjct: 51 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 219 ASEVLLALEYLHMM---GVVYRDLKPENVLVREDGHIM-LSDF 257
+ + YLH M +++RDLKP N+L+ G ++ + DF
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 151
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE-TLFNVVGQPLKFP 410
G+ ++APE+ G + D +++GI +E++ R PF G + V + P
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 411 EGSSISFAAKDLIRGLLVKDPQKR 434
++ + L+ KDP +R
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQR 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 255 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 67
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 124
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
++G G G V+ + + G A+K + R ++ R + E + L P + LY
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVE-ELVACAGLSSPRIVPLY 116
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ + ME GG L L ++ E +Y + L LEYLH +++
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 238 DLKPENVLVREDG-HIMLSDFDLSL 261
D+K +NVL+ DG L DF +L
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHAL 199
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGR 152
D + V+ ++ + ++ + +G G+ G V L+ G A+K + G +
Sbjct: 18 DPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ 77
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ +E I+ DHP + L ++ EF G L + ++ G+
Sbjct: 78 RR--DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 135
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL M V+RDL N+LV + +SDF LS
Sbjct: 136 QLVGMLRG-IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
++PT ++ + APE I+ SA D W++GI +E++ G P+ N++
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF 437
+ N + Q + P A L+ KD R F
Sbjct: 250 I-NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 287
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 67
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 124
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 70
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 127
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + +LL+ +G G+ G V L + R G A+K + A E +++
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA-----QAFLAEASVMTQ 70
Query: 168 LDHPFLPTLYSHFETDKFSC-LLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLA 225
L H L L +K ++ E+ + G L LR R + +F + +V A
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEA 129
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 14/68 (20%)
Query: 337 VLIAEPTSARSMSFVGTHE-------------YLAPEIIRGDGHGSAVDWWTFGIFFYEL 383
VL++E A+ F T E + APE +R + D W+FGI +E+
Sbjct: 148 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 384 L-LGRTPF 390
GR P+
Sbjct: 208 YSFGRVPY 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 85
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 142
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 8/169 (4%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG----CLFAMKVMDKGMLAG 151
D + V+ ++ + + ++ + +G G+ G V L+ G C+ A+K + G
Sbjct: 1 DPNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTER 59
Query: 152 RKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFS 211
+++ +E I+ +HP + L +L EF G L + + G+
Sbjct: 60 QRR--EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV 117
Query: 212 EQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + + YL M V+RDL N+LV + +SDF LS
Sbjct: 118 IQLVGMLRG-IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
++PT S+ + APE I SA D W++GI +E++ G P+ N++
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 232
Query: 399 LFNVVGQPLKFP 410
+ N + Q + P
Sbjct: 233 I-NAIEQDYRLP 243
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 98
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 99 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 155
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMK-VMDKGMLAGRKKLMRAQTEREILSLL 168
L F ++ LG G G V+ A+ + C +A+K + R+K+MR E + L+ L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR---EVKALAKL 60
Query: 169 DHPFLPTLYSHF----ETDK--------FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATR 216
+HP + ++ + T+K + + M+ C +L + G+ E+ R
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL---KDWMNGRCTIEERER 117
Query: 217 FYASEVLL----ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ L A+E+LH G+++RDLKP N+ D + + DF L
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL P AR VGT Y++PE I G+ + VD ++ G+ +ELL PF R
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER 233
Query: 397 -ETLFNVVGQPLKFPEGSSISFAAKD-LIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
TL +V + LKFP + + + +++ +L P +R A I ++ FE ++
Sbjct: 234 VRTLTDV--RNLKFPPLFTQKYPCEYVMVQDMLSPSPMER----PEAINIIENAVFEDLD 287
Query: 455 W 455
+
Sbjct: 288 F 288
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + +LL+ +G G+ G V L + R G A+K + A E +++
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA-----QAFLAEASVMTQ 61
Query: 168 LDHPFLPTLYSHFETDKFSC-LLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLA 225
L H L L +K ++ E+ + G L LR R + +F + +V A
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEA 120
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 14/68 (20%)
Query: 337 VLIAEPTSARSMSFVGTHE-------------YLAPEIIRGDGHGSAVDWWTFGIFFYEL 383
VL++E A+ F T E + APE +R + D W+FGI +E+
Sbjct: 139 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
Query: 384 L-LGRTPF 390
GR P+
Sbjct: 199 YSFGRVPY 206
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK +G G G V A + A+K M+ K+ R E + +L+H
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALK-----MVRNEKRFHRQAAEE--IRILEHLR 151
Query: 171 -------PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ + +F C+ E S +L+ L ++ + FS R +A +L
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF 264
L+ LH +++ DLKPEN+L+++ G + D C+
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLG 386
R + + + Y APE+I G +G +D W+ G ELL G
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 73
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 74 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQIC 130
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
LK+LG G G V + R + A+K++ +G ++ + + A+ ++ L H L
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 66
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY + ++ E+ + G L R+ F Q +V A+EYL
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 125
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV + G + +SDF LS
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLS 151
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 359 PEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
PE++ S D W FG+ +E+ LG+ P++ N ET
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 352 GTHEYLAPEII----RGDGHGSAVDWWTFGIFFYELLLGRTPF-KGNGNRETLFNVV-GQ 405
G Y+APE I G+ D W+ GI YEL GR P+ K N + L VV G
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246
Query: 406 PLKFPEGSSISFAAK--DLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
P + F+ + + L KD KR +K E+ +HPF
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK----ELLKHPFI 289
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 10/190 (5%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS 166
D + L ++G G GSV + G + A+K + + +K + + ++
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV-VMR 76
Query: 167 LLDHPFLPTLYSHF--ETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
D P++ Y E D + C+ + S + E+ +
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 225 ALEYL-HMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSY 283
AL +L + +++RD+KP N+L+ G+I L DF +S + S + + D CR
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGCRPY-- 191
Query: 284 CIQPSCIDPA 293
+ P IDP+
Sbjct: 192 -MAPERIDPS 200
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-- 170
+ +LK +G G G V A + A+K M+ K+ R E + +L+H
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALK-----MVRNEKRFHRQAAEE--IRILEHLR 151
Query: 171 -------PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
+ + +F C+ E S +L+ L ++ + FS R +A +L
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF 264
L+ LH +++ DLKPEN+L+++ G + D C+
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLG 386
R + + Y APE+I G +G +D W+ G ELL G
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L + +LL+ +G G+ G V L + R G A+K + A E +++
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA-----QAFLAEASVMTQ 55
Query: 168 LDHPFLPTLYSHFETDKFSC-LLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLA 225
L H L L +K ++ E+ + G L LR R + +F + +V A
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEA 114
Query: 226 LEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 14/68 (20%)
Query: 337 VLIAEPTSARSMSFVGTHE-------------YLAPEIIRGDGHGSAVDWWTFGIFFYEL 383
VL++E A+ F T E + APE +R + D W+FGI +E+
Sbjct: 133 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
Query: 384 L-LGRTPF 390
GR P+
Sbjct: 193 YSFGRVPY 200
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 65
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 66 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 122
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
LK+LG G G V + R + A+K++ +G ++ + + E +++ L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY + ++ E+ + G L R+ F Q +V A+EYL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV + G + +SDF LS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGN 395
VL E TS+R F + PE++ S D W FG+ +E+ LG+ P++ N
Sbjct: 155 VLDDEYTSSRGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 212
Query: 396 RET 398
ET
Sbjct: 213 SET 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 85 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 137
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 138 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 264
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 265 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 291
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 62 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 114
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 115 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 241
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 242 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 268
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 71
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 72 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 128
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 67
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 124
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 117 KKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFL 173
+ +G G+ G V L+ G A+K + G +++ E I+ DHP +
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG--EASIMGQFDHPNI 85
Query: 174 PTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
L K ++ E+ G L T ++ G+ Q + ++YL MG
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRG-ISAGMKYLSDMG 144
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL N+L+ + +SDF LS
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 31/212 (14%)
Query: 67 SSLSTGDANEASFRSACLSKPHKGNDMKWDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGS 126
SSLS + + + + P +D V +K +D L +LG G G
Sbjct: 7 SSLSPTEGKGSGLQGHIIENPQYFSDA---CVHHIKRRD-------IVLKWELGEGAFGK 56
Query: 127 VYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFE 181
V+LAE ++ L A+K + + + R+ R E E+L++L H + +
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHIVRFFGVCT 113
Query: 182 TDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRF------------YASEVLLALEY 228
+ ++ E+ GDL+ LR P AS+V + Y
Sbjct: 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY 173
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L + V+RDL N LV + + + DF +S
Sbjct: 174 LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVV-GQPLKFPEGS 413
++ PE I + D W+FG+ +E+ G+ P+ N E + + G+ L+ P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
A ++RG ++PQ+R K
Sbjct: 286 PPEVYA--IMRGCWQREPQQRHSIK 308
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLH-TLRQRQPGKHFSEQATRFY 218
E LS ++HP + LY CL+ME+ GG L+ L +P +++ +
Sbjct: 50 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 219 ASEVLLALEYLHMM---GVVYRDLKPENVLVREDGHIM-LSDF 257
+ + YLH M +++RDLKP N+L+ G ++ + DF
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 150
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 352 GTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRE-TLFNVVGQPLKFP 410
G+ ++APE+ G + D +++GI +E++ R PF G + V + P
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 411 EGSSISFAAKDLIRGLLVKDPQKR 434
++ + L+ KDP +R
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQR 248
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 60 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 112
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 113 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 239
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 240 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 266
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 189 LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRE 248
L+ G DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+
Sbjct: 123 LVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 179
Query: 249 DGHIMLSDFDLS 260
+ + DF L+
Sbjct: 180 TXDLKICDFGLA 191
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 34/133 (25%)
Query: 350 FVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
Query: 406 P-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFKR 439
P L P + + + A DL+ +L +P KR+ ++
Sbjct: 267 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 326
Query: 440 GATEIKQHPFFES 452
HP+ E
Sbjct: 327 ALA----HPYLEQ 335
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 66
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 67 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 123
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 85
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 142
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 256 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 255 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 256 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 57 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 109
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 110 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 237 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 263
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 255 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 59 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 111
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 112 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 238
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 239 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
LK+LG G G V + R + A+K++ +G ++ + + A+ ++ L H L
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 62
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY + ++ E+ + G L R+ F Q +V A+EYL
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV + G + +SDF LS
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLS 147
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 359 PEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
PE++ S D W FG+ +E+ LG+ P++ N ET
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 210
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 118 KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLY 177
++G G G V+ + + G A+K + R ++ R + E + L P + LY
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVE-ELVACAGLSSPRIVPLY 132
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYR 237
+ + ME GG L L ++ E +Y + L LEYLH +++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 238 DLKPENVLVREDG-HIMLSDFDLSL 261
D+K +NVL+ DG L DF +L
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHAL 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
LK+LG G G V + R + A+K++ +G ++ + + E +++ L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
LY + ++ E+ + G L R+ F Q +V A+EYL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV + G + +SDF LS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 359 PEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
PE++ S D W FG+ +E+ LG+ P++ N ET
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 57 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 109
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 110 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 237 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 263
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + K+ +
Sbjct: 54 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSLD 106
Query: 213 QATR-FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A+ YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 107 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 234 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 260
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ Q+ +H ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 475
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 536 VKWYA--PECIN 545
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 596
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 597 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 633
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ Q+ +H ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 476
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 537 VKWYA--PECIN 546
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 597
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 598 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 634
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + F L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + FS
Sbjct: 57 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSL 108
Query: 213 QATRF--YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 237 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGR 152
D Q V+ ++ ++ K +G G+ G V L+ G A+K + G +
Sbjct: 14 DPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 73
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ +E I+ DHP + L K ++ E+ G L ++ G+
Sbjct: 74 RRDF--LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 131
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL M V+RDL N+LV + +SDF +S
Sbjct: 132 QLVGMLRG-IGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 95 WDAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG----CLFAMKVMDKGMLA 150
W +++ K D + + ++ + +G G+ G V L+ G C+ A+K + G
Sbjct: 2 WGSMEFAKEID----VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTE 56
Query: 151 GRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHF 210
+++ +E I+ +HP + L +L EF G L + + G+
Sbjct: 57 RQRR--EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 114
Query: 211 SEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + + YL M V+RDL N+LV + +SDF LS
Sbjct: 115 VIQLVGMLRG-IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
++PT S+ + APE I SA D W++GI +E++ G P+ N++
Sbjct: 171 SDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 230
Query: 399 LFNVVGQPLKFP 410
+ N + Q + P
Sbjct: 231 I-NAIEQDYRLP 241
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 136 GCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDH-------PFLPTLYSHF--ETD 183
G + M+ + G + K++ + +Q ++ +L LD PF T Y E D
Sbjct: 65 GVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD 124
Query: 184 KFSCL-LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH-MMGVVYRDLKP 241
+ C+ LM+ + D + G+ E A ++ ALE+LH + V++RD+KP
Sbjct: 125 VWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKP 182
Query: 242 ENVLVREDGHIMLSDFDLS 260
NVL+ G + + DF +S
Sbjct: 183 SNVLINALGQVKMCDFGIS 201
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 28 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 88 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 145
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 146 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++LG G G V+LAE ++ L A+K + RK R E E+L+ L
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAELLTNLQ 73
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-----------LRQRQPGKHFSEQATRFY 218
H + Y ++ E+ GDL+ + + P ++
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 219 ASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A ++ + YL V+RDL N LV E+ + + DF +S
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + D L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 70
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q + Y S++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQAH-AERIDHIKLLQYTSQIC 127
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL N+LV + + + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
+ +K LG G G+VY + E + A+K++++ G K + E I++ +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVEFMDEALIMASM 97
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
DHP L L + + G L + + + + Q + ++ + Y
Sbjct: 98 DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMY 155
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++G +
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 222
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 223 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 129
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L Q ++ RFY E+L AL+Y H G+++RD+KP N
Sbjct: 108 KTPALVFEYINNTDFKQLYQI-----LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHN 162
Query: 244 VLV 246
V++
Sbjct: 163 VMI 165
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A + A+K + + + RA E ++ +++
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + L + F K ++ME +L + Q + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQML 136
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G+ E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L Q ++ RFY E+L AL+Y H G+++RD+KP N
Sbjct: 113 KTPALVFEYINNTDFKQLYQI-----LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHN 167
Query: 244 VLV 246
V++
Sbjct: 168 VMI 170
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L+Y+H +++RDLKP N+ V ED + + D L+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDK---GMLAGRK-----KLMRAQTEREI 164
++ L +G G GSV A G A+K + + ++ ++ +L++ +
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LLD F P D + L+ G DL+ + + Q ++ +F ++L
Sbjct: 84 IGLLD-VFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 136
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
L+Y+H +++RDLKP N+ V ED + + D
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 45/169 (26%)
Query: 339 IAEPTSARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRE 397
+A T +V T Y APEI+ H VD W+ G ELL GRT F G + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 398 TL---FNVVGQP----LK-------------FPEGSSISFA---------AKDLIRGLLV 428
L +VG P LK + ++FA A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 429 KDPQKRLGFKRGATEIKQHPFFESVNWALIRSTHPPE---IPKPVDLSF 474
D KR+ A + H +F H P+ + P D SF
Sbjct: 291 LDSDKRI----TAAQALAHAYFAQY--------HDPDDEPVADPYDQSF 327
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + FS
Sbjct: 437 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSL 488
Query: 213 QATRF--YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
YA ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 617 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 643
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 76 LMKXVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLXQVIQME-----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 298 LSKMLVIDPAKRISVDDAL----QHPYI 321
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ + Q +H ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 111
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 172 VKWYA--PECIN 181
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 232
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 233 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 269
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ + Q +H ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 117
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 178 VKWYA--PECIN 187
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 239 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 275
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 76 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLXQVIQME-----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 298 LSKMLVIDPAKRISVDDAL----QHPYI 321
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + TL D +++E+ S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 136 GCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDH-------PFLPTLYSHF--ETD 183
G + M+ + G + K++ + +Q ++ +L LD PF T Y E D
Sbjct: 21 GVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD 80
Query: 184 KFSCL-LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH-MMGVVYRDLKP 241
+ C+ LM+ + D + G+ E A ++ ALE+LH + V++RD+KP
Sbjct: 81 VWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKP 138
Query: 242 ENVLVREDGHIMLSDFDLS 260
NVL+ G + + DF +S
Sbjct: 139 SNVLINALGQVKMCDFGIS 157
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 51/183 (27%)
Query: 210 FSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV-REDGHIMLSDFDLSLRCFVSPK 268
S Q R Y + AL+ +H G+V+RD+KP N L R L DF L+
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA-------- 165
Query: 269 LVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNXXXXXXXXXXXX 328
Q + D + + V+ Q C
Sbjct: 166 --QGTHDTKIELLKF----------------VQSEAQQERC------------------- 188
Query: 329 XXNSDSLPVLIAEPTSARSMSFVGTHEYLAPEII-RGDGHGSAVDWWTFGIFFYELLLGR 387
N S+ + + + R+ GT + APE++ + +A+D W+ G+ F LL GR
Sbjct: 189 SQNKCSICLSRRQQVAPRA----GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 388 TPF 390
PF
Sbjct: 245 YPF 247
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 69 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLXQVIQME-----LDHER 120
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 121 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 230
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 291 LSKMLVIDPAKRISVDDAL----QHPYI 314
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 112 HFRLLKKLGCGDIGSVYLAE---LRD-MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
H + L++LG G+ GSV + L+D G + A+K + + + L + E EIL
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKS 68
Query: 168 LDH----PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
L H + YS + L+ME+ G L Q+ + Y S++
Sbjct: 69 LQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQIC 125
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++R+L N+LV + + + DF L+
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF L+
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 188 LLMEFCSGGDLHTL----RQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
+++ F GDLHT R KH Q + ++ L +EYL ++RDL N
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 244 VLVREDGHIMLSDFDLSLRCF 264
++R+D + ++DF LS + +
Sbjct: 178 CMLRDDMTVCVADFGLSKKIY 198
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETL-FNVVGQPLKFPE 411
+++A E + + S D W FG+ +E+ G TP+ G N E + + G LK PE
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE 272
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ + Q +H ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 117
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 178 VKWYA--PECIN 187
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 239 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 275
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ Q+ +H ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 131
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 192 VKWYA--PECIN 201
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 252
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 253 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 289
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ + S
Sbjct: 76 LMKXVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLXQVIQMELDHERMS--- 129
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 130 --YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 298 LSKMLVIDPAKRISVDDAL----QHPYI 321
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ + Q +H ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 123
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 184 VKWYA--PECIN 193
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 244
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 245 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 281
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A + A+K + + + RA E ++ ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 119
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + +L + F K L+ME ++ + + ++L
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 174
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 275
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 336 LSKMLVIDPAKRISVDDAL----QHPYI 359
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ + Q +H ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 113
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 174 VKWYA--PECIN 183
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 234
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 235 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 271
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + FS
Sbjct: 57 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSL 108
Query: 213 QATRF--YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
YA ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 237 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 263
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
+ +K LG G G+VY + E + A+K++++ G K + E I++ +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVEFMDEALIMASM 74
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
DHP L L + + G L + + + + Q + ++ + Y
Sbjct: 75 DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMY 132
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ Q+ +H ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELV 133
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 194 VKWYA--PECIN 203
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 254
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 255 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 291
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYA 219
E ++ LD+P++ + E + + L+ME G L+ Q+ +H ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELV 133
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACR 279
+V + ++YL V+RDL NVL+ + +SDF LS ++
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 280 ISSYCIQPSCID 291
+ Y P CI+
Sbjct: 194 VKWYA--PECIN 203
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG-NGNRETLFNVVGQPLKFPEG 412
++ APE I S D W+FG+ +E G+ P++G G+ T G+ + P G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 254
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
DL+ D + R GF A E++ ++ V
Sbjct: 255 CPREMY--DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 291
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A + A+K + + + RA E ++ +++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + L + F K ++ME +L + Q + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQML 136
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A + A+K + + + RA E ++ ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 119
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + +L + F K L+ME ++ + + ++L
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 174
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 275
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 336 LSKMLVIDPAKRISVDDAL----QHPYI 359
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTA----PTPQQLQAFKNEV 60
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 61 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 111
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 233 SPDLSKV 239
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 117 KKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSLL- 168
K LG G G V LAE + A+K++ A K L +E E++ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIG 91
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFS--------EQATR-- 216
H + L D +++E+ S G+L Q R PG FS EQ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 217 --FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 275
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 276 NCTNELYMMMRDCWHAVPSQRPTFKQ 301
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 97 AVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGRK 153
+ Q V +L + + K +G G+ G V L+ A+K + G ++
Sbjct: 19 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 154 KLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQ 213
+ E I+ DHP + L K ++ E+ G L + ++ + Q
Sbjct: 79 RDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 136
Query: 214 ATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 137 LVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 97 AVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGRK 153
+ Q V +L + + K +G G+ G V L+ A+K + G ++
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 154 KLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQ 213
+ E I+ DHP + L K ++ E+ G L + ++ + Q
Sbjct: 62 RDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 119
Query: 214 ATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 120 LVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTA----PTPQQLQAFKNEV 57
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 58 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 108
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 109 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 230 SPDLSKV 236
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME +L + Q + +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDA-NLSQVIQME----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L+ +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G+ E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTA----PTPQQLQAFKNEV 60
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 61 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 111
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 233 SPDLSKV 239
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Query: 99 QCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKL 155
Q V+ ++ ++ K +G G+ G V L+ G A+K + G +++
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 156 MRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQAT 215
+E I+ DHP + L K ++ E+ G L ++ G+ Q
Sbjct: 62 F--LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 216 RFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++YL M V+RDL N+LV + +SDF +S
Sbjct: 120 GMLRG-IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 6/167 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E+ G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
Q + ++YL MG V+RDL N+L+ + +SDF L
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ + S
Sbjct: 76 LMKXVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELDHERMS--- 129
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 130 --YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 298 LSKMLVIDPAKRISVDDAL----QHPYI 321
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQAFKNEV 83
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 84 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 134
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 256 SPDLSKV 262
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQAFKNEV 75
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 76 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 126
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 127 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 248 SPDLSKV 254
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQAFKNEV 83
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 84 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 134
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 256 SPDLSKV 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
K L A T R+ DHP + L T+ ++ME C+ G+L + Q + FS
Sbjct: 437 KFLQEALTMRQ----FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSL 488
Query: 213 QATRF--YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
YA ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVV-GQPLKFPEG 412
+++APE I SA D W FG+ +E+L+ G PF+G N + + + G+ L P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
+ + L+ DP +R F TE+K
Sbjct: 617 CPPTLYS--LMTKCWAYDPSRRPRF----TELK 643
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 103 SKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTER 162
S D ++ G + +++G G G+VY + + + V ++L + E
Sbjct: 27 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQAFKNEV 82
Query: 163 EILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF----- 217
+L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 83 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKL 133
Query: 218 --YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 134 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 255 SPDLSKV 261
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 75 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 126
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 127 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 177 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 236
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 237 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 296
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 297 LSKMLVIDPAKRISVDDAL----QHPYI 320
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 118 KLGCGDIGSVYLAELRDMGCL--FAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
K+G G G VY A+ +D +A+K + G M A E +L L HP + +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALK-----QIEGTGISMSACREIALLRELKHPNVIS 82
Query: 176 LYSHF--ETDKFSCLLMEFCSGGDLHTLRQRQPGK------HFSEQATRFYASEVLLALE 227
L F D+ LL ++ H ++ + K + ++L +
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 228 YLHMMGVVYRDLKPENVLVR----EDGHIMLSDFDLSLRCFVSPKLVQSSDDPAC 278
YLH V++RDLKP N+LV E G + ++D + R F SP + DP
Sbjct: 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-RLFNSPLKPLADLDPVV 196
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 21/86 (24%)
Query: 351 VGTHEYLAPEIIRGDGHGS-AVDWWTFGIFFYELLLGRTPFK------------GNGNRE 397
V T Y APE++ G H + A+D W G F ELL F + +
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255
Query: 398 TLFNVVGQPL--------KFPEGSSI 415
+FNV+G P K PE S++
Sbjct: 256 RIFNVMGFPADKDWEDIKKMPEHSTL 281
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 76 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 298 LSKMLVIDPAKRISVDDAL----QHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 77 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 128
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 238
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 298
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 299 LSKMLVIDPAKRISVDDAL----QHPYI 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 77 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 128
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 238
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 298
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 299 LSKMLVIDPAKRISVDDAL----QHPYI 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 70 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 121
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 231
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 232 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 291
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 292 LSKMLVIDPAKRISVDDAL----QHPYI 315
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
K+G+ + + + +G G G V A R A+K++ + L +AQ E
Sbjct: 28 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVR 83
Query: 164 ILSLLDHP------FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF 217
+L L++ ++ L HF CL+ E S +L+ L + + S TR
Sbjct: 84 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRK 142
Query: 218 YASEVLLALEYLHM--MGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQ 271
+A ++ AL +L + +++ DLKPEN+L+ + D C + ++ Q
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 198
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + + Y +PE++ G + A+D W+ G E+ G F G N N + +
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG-ANEVDQMNKIVE 253
Query: 406 PLKFPEGSSISFAAK 420
L P + A K
Sbjct: 254 VLGIPPAHILDQAPK 268
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
K+G+ + + + +G G G V A R A+K++ + L +AQ E
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVR 102
Query: 164 ILSLLDHP------FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF 217
+L L++ ++ L HF CL+ E S +L+ L + + S TR
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRK 161
Query: 218 YASEVLLALEYLHM--MGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQ 271
+A ++ AL +L + +++ DLKPEN+L+ + D C + ++ Q
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQ 217
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + + Y +PE++ G + A+D W+ G E+ G F G N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG-ANEVDQMNKIVE 272
Query: 406 PLKFPEGSSISFAAK 420
L P + A K
Sbjct: 273 VLGIPPAHILDQAPK 287
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 42/214 (19%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI--L 165
L L + +LL+ +G G G+VY L + A+KV A R+ + E+ I +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPV--AVKVFS---FANRQNFI---NEKNIYRV 61
Query: 166 SLLDHPFLPTLYSHFETDKFS-----CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS 220
L++H + E L+ME+ G L K+ S + + +S
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLX--------KYLSLHTSDWVSS 113
Query: 221 -----EVLLALEYLHMM---------GVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVS 266
V L YLH + +RDL NVLV+ DG ++SDF LS+R
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR-LTG 172
Query: 267 PKLVQSSDDPACRISSY----CIQPSCIDPACKL 296
+LV+ ++ IS + P ++ A L
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNL 206
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 76 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 238 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 298 LSKMLVIDPAKRISVDDAL----QHPYI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 69 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 120
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 230
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 291 LSKMLVIDPAKRISVDDAL----QHPYI 314
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 6/168 (3%)
Query: 96 DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGR 152
D Q V +L + + K +G G+ G V L+ A+K + G +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSE 212
++ E I+ DHP + L K ++ E G L + ++ +
Sbjct: 90 RRDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q + ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 148 QLVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
++ K +G G+ G V L+ G A+K + G +++ +E I+ D
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--LSEASIMGQFD 67
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
HP + L K ++ E+ G L ++ G+ Q + ++YL
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG-IGSGMKYL 126
Query: 230 HMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
M V+RDL N+LV + +SDF +S
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+SLL+ F P E + L+ME ++ +
Sbjct: 70 LMKCVNHKNIISLLN-VFTPQ--KTLEEFQDVYLVMELMDANLCQVIQME-----LDHER 121
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 51/148 (34%), Gaps = 44/148 (29%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 231
Query: 403 VGQ-------------------------------PLKFPE---------GSSISFAAKDL 422
+ Q P FP+ + A+DL
Sbjct: 232 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 291
Query: 423 IRGLLVKDPQKRLGFKRGATEIKQHPFF 450
+ +LV DP KR+ QHP+
Sbjct: 292 LSKMLVIDPAKRISVDDAL----QHPYI 315
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR 396
VL P A VGT Y++PE I G+ + VD ++ G+ +ELL F R
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMER 279
Query: 397 ETLFNVVGQPLKFPEGSSISFAAKD-LIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
+ V + LKFP + + + +++ +L P +R AT+I ++ FE++
Sbjct: 280 VRIITDV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTER----PEATDIIENAIFENL 332
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
++ A+E+LH G+++RDLKP N+ D + + DF L
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 270 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 210 FSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRED-GHIMLSDF 257
E+ R + +VL A+ + H GV++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 118 KLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+LG G G V+LAE ++ L A+K + + + R+ R E E+L++L H
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQH 75
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRF------------YA 219
+ + + ++ E+ GDL+ LR P A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
S+V + YL + V+RDL N LV + + + DF +S
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVV-GQPLKFPEGS 413
++ PE I + D W+FG+ +E+ G+ P+ N E + + G+ L+ P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
A ++RG ++PQ+R K
Sbjct: 257 PPEVYA--IMRGCWQREPQQRHSIK 279
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 257 FDLS 260
F L+
Sbjct: 170 FGLA 173
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 350 FVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 406 PLKFPEGSSISFAAKDLIRGLLVKD--PQKRL 435
P + I+ A++ + L K+ P RL
Sbjct: 249 PSQEDLNCGINLKARNYLLSLPHKNKVPWNRL 280
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 81
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFS--------EQATR 216
+ H + L D +++E+ S G+L Q R PG +S EQ +
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 217 ----FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 209 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 267
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 268 NCTNELYMMMRDCWHAVPSQRPTFKQ 293
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 99 QCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAEL-----RDMGCLFAMKVM-DKGMLAGR 152
Q ++K ++ L R +++LG G VY L + A+K + DK R
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 153 KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP----G 207
++ + E + + L HP + L D+ ++ +CS GDLH L R P G
Sbjct: 74 EEF---RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 208 KHFSEQATR---------FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFD 258
++ + +++ +EYL VV++DL NVLV + ++ +SD
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 259 L 259
L
Sbjct: 191 L 191
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 7/182 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTEREILSLLDH 170
+ ++ LG G G V L G +V K + +G + + E EIL L H
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 171 PFLPTLYSHFETDKFSC--LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+ D + L+MEF G L + K +Q + YA ++ ++Y
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDY 141
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPS 288
L V+RDL NVLV + + + DF L+ + DD + Y P
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA--PE 199
Query: 289 CI 290
C+
Sbjct: 200 CL 201
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 78
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFS--------EQATR 216
+ H + L D +++E+ S G+L Q R PG +S EQ +
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 217 ----FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 206 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 264
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 265 NCTNELYMMMRDCWHAVPSQRPTFKQ 290
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 270 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 176
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM--DKGMLAGRK---KLMR----AQTERE 163
+ L++KLG G +V+LA+ AMK++ DK + KL++ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 164 -------ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATR 216
IL LLDH ++H + +++ G +L L ++ + +
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 217 FYASEVLLALEYLHMM-GVVYRDLKPENVLV 246
+ ++LL L+Y+H G+++ D+KPENVL+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFK 391
+ T EY +PE++ G G D W+ +EL+ G F+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 244 VLV 246
V++
Sbjct: 156 VMI 158
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 244 VLV 246
V++
Sbjct: 156 VMI 158
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 241
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 242 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 148
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS + FV T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 239
Query: 403 VGQ 405
+ Q
Sbjct: 240 IEQ 242
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ +
Sbjct: 78 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQM-----ELDHER 129
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 244 VLV 246
V++
Sbjct: 156 VMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 102 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 156
Query: 244 VLV 246
V++
Sbjct: 157 VMI 159
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 244 VLV 246
V++
Sbjct: 156 VMI 158
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 130
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFS--------EQATR 216
+ H + L D +++E+ S G+L Q R PG +S EQ +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 217 ----FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 316
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 317 NCTNELYMMMRDCWHAVPSQRPTFKQ 342
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 103 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 157
Query: 244 VLV 246
V++
Sbjct: 158 VMI 160
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 122 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 176
Query: 244 VLV 246
V++
Sbjct: 177 VMI 179
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVM--DKGMLAGRK---KLMR----AQTERE 163
+ L++KLG G +V+LA+ AMK++ DK + KL++ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 164 -------ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATR 216
IL LLDH ++H + +++ G +L L ++ + +
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 217 FYASEVLLALEYLHMM-GVVYRDLKPENVLV 246
+ ++LL L+Y+H G+++ D+KPENVL+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFK 391
+ T EY +PE++ G G D W+ +EL+ G F+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 244 VLV 246
V++
Sbjct: 156 VMI 158
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 118 KLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+LG G G V+LAE ++ L A+K + + + R+ R E E+L++L H
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQH 81
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSEQATRF------------YA 219
+ + + ++ E+ GDL+ LR P A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 220 SEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
S+V + YL + V+RDL N LV + + + DF +S
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVV-GQPLKFPEGS 413
++ PE I + D W+FG+ +E+ G+ P+ N E + + G+ L+ P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFK 438
A ++RG ++PQ+R K
Sbjct: 263 PPEVYA--IMRGCWQREPQQRHSIK 285
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 274
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 275 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 313
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 181
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDF 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 82
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFS--------EQATR 216
+ H + L D +++E+ S G+L Q R PG +S EQ +
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 217 ----FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 210 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 268
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 269 NCTNELYMMMRDCWHAVPSQRPTFKQ 294
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 228 SPDLSKV 234
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
DG + +G +++G G G+VY + + + V ++L + E +
Sbjct: 7 DGQITVG-----QRIGSGSFGTVYKGKWHGDVAVKMLNVTA----PTPQQLQAFKNEVGV 57
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF------- 217
L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 58 LRKTRHVNI-LLFMGYSTAPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLID 108
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 101 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 155
Query: 244 VLV 246
V++
Sbjct: 156 VMI 158
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 228 SPDLSKV 234
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
DG + +G +++G G G+VY + + + V ++L + E +
Sbjct: 7 DGQITVG-----QRIGSGSFGTVYKGKWHGDVAVKMLNVTA----PTPQQLQAFKNEVGV 57
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF------- 217
L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 58 LRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLID 108
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 352 GTHEYLAPEIIR---GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
G+ ++APE+IR + + D + FGI YEL+ G+ P+ NR+ + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 409 FPEGSSI 415
P+ S +
Sbjct: 228 SPDLSKV 234
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
DG + +G +++G G G+VY + + + V ++L + E +
Sbjct: 7 DGQITVG-----QRIGSGSFGTVYKGKWHGDVAVKMLNVTA----PTPQQLQAFKNEVGV 57
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF------- 217
L H + L+ + T ++ ++C G L+ H T+F
Sbjct: 58 LRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLID 108
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A + ++YLH +++RDLK N+ + ED + + DF L+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN 243
K L+ E+ + D L ++ R+Y E+L AL+Y H G+++RD+KP N
Sbjct: 102 KTPSLIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHN 156
Query: 244 VLV 246
V++
Sbjct: 157 VMI 159
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 89
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPGKHFS--------EQATR 216
+ H + L D +++E+ S G+L Q R PG +S EQ +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 217 ----FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 275
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 276 NCTNELYMMMRDCWHAVPSQRPTFKQ 301
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 243 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 149
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE 163
K+G+ + + + +G G G V A R A+K++ + L +AQ E
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVR 102
Query: 164 ILSLLDHP------FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRF 217
+L L++ ++ L HF CL+ E S +L+ L + + S TR
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRK 161
Query: 218 YASEVLLALEYLHM--MGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQ 271
+A ++ AL +L + +++ DLKPEN+L+ + D C + ++ Q
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 217
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
R + + Y +PE++ G + A+D W+ G E+ G F G N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG-ANEVDQMNKIVE 272
Query: 406 PLKFPEGSSISFAAK 420
L P + A K
Sbjct: 273 VLGIPPAHILDQAPK 287
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 254
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 255 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L KKLG G G V++A + A+K M G ++ L A ++ L H
Sbjct: 17 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHDK 71
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L L++ T + ++ EF + G L + G +++++ + ++
Sbjct: 72 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV ++DF L+
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETL 399
++ APE I D W+FGI E++ GR P+ G N E +
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L KKLG G G V++A + A+K M G ++ L A ++ L H
Sbjct: 190 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHDK 244
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L L++ T + ++ EF + G L + G +++++ + ++
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV ++DF L+
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETL 399
++ APE I D W+FGI E++ GR P+ G N E +
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 243 FRQ--RVSXECQHLIRWCLALRPXDRPTFE----EIQNHPWMQDV 281
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 149
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 7/182 (3%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGML--AGRKKLMRAQTEREILSLLDH 170
+ ++ LG G G V L G +V K + +G + + E EIL L H
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 171 PFLPTLYSHFETDKFSC--LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
+ D + L+MEF G L + K +Q + YA ++ ++Y
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDY 129
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPS 288
L V+RDL NVLV + + + DF L+ + DD + Y P
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA--PE 187
Query: 289 CI 290
C+
Sbjct: 188 CL 189
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
L ++ LK +G G G V A + A+K + + + RA E ++ +++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 170 HPFLPTLYSHFETDKF------SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
H + L + F K ++ME +L + Q + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQML 136
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 270 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 176
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 241
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 242 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 148
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L KKLG G G V++A + A+K M G ++ L A ++ L H
Sbjct: 184 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHDK 238
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L L++ T + ++ EF + G L + G +++++ + ++
Sbjct: 239 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV ++DF L+
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLA 325
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETL 399
++ APE I D W+FGI E++ GR P+ G N E +
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Query: 117 KKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQ--TEREILSLLDHPFLP 174
K +G G+ G VY L+ + V K + AG + R E I+ H +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 175 TLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV 234
L K ++ E+ G L + + G+ FS + ++YL M
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 235 VYRDLKPENVLVREDGHIMLSDFDLS 260
V+RDL N+LV + +SDF LS
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLS 194
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETL 399
+ APE I SA D W+FGI +E++ G P+ N E +
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM 260
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 257 FDLS 260
F L+
Sbjct: 172 FGLA 175
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 310 QALA----HPYLEQ 319
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV 246
++ C G L+++ R TR A E++ + YLH G++++DLK +NV
Sbjct: 105 AIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 247 REDGHIMLSDFDL 259
++G ++++DF L
Sbjct: 164 -DNGKVVITDFGL 175
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 112 HFRLLKKLGCGDIGSVYLAELRDMGCLF---AMKVMDKGMLAGR--KKLMRAQTEREILS 166
F L + LG G+ GSV A+L+ F A+K++ ++A ++ +R E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR---EAACMK 80
Query: 167 LLDHPFLPTLYSHFETDK------FSCLLMEFCSGGDLHT--LRQRQPGKHFS---EQAT 215
DHP + L + +++ F GDLH L R F+ +
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140
Query: 216 RFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF 264
RF ++ +EYL ++RDL N ++ ED + ++DF LS + +
Sbjct: 141 RFMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 257 FDLS 260
F L+
Sbjct: 168 FGLA 171
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 306 QALA----HPYLEQ 315
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G VY L D G L A+K + + G + ++ QTE E++S+ H L L
Sbjct: 46 LGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGE--LQFQTEVEMISMAVHRNLLRLRG 102
Query: 179 HFETDKFSCLLMEFCSGGDLHT-LRQR---QPGKHFSEQATRFYASEVLLALEYLHMM-- 232
T L+ + + G + + LR+R QP + ++ S LA YLH
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA--YLHDHCD 160
Query: 233 -GVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++RD+K N+L+ E+ ++ DF L+
Sbjct: 161 PKIIHRDVKAANILLDEEFEAVVGDFGLA 189
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 243 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 149
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 257 FDLS 260
F L+
Sbjct: 168 FGLA 171
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 306 QALA----HPYLEQ 315
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 257 FDLS 260
F L+
Sbjct: 172 FGLA 175
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 310 QALA----HPYLEQ 319
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 149 LAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGK 208
L ++K M +E I+ LDHP + L E + + ++ME G+L +R
Sbjct: 66 LDNKEKFM---SEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS 121
Query: 209 HFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y+ ++ A+ YL + V+RD+ N+LV + L DF LS
Sbjct: 122 -LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 149 LAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGK 208
L ++K M +E I+ LDHP + L E + + ++ME G+L +R
Sbjct: 54 LDNKEKFM---SEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS 109
Query: 209 HFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y+ ++ A+ YL + V+RD+ N+LV + L DF LS
Sbjct: 110 -LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 228 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 134
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 226
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 227 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 133
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 228 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 134
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 74
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPG------------KHFSE 212
+ H + L D +++E+ S G+L Q R PG + S
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 260
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 261 NCTNELYMMMRDCWHAVPSQRPTFKQ 286
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 261
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 262 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 300
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 168
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDF 194
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 257 FDLS 260
F L+
Sbjct: 170 FGLA 173
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 350 FVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L +++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 6/167 (3%)
Query: 97 AVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELR---DMGCLFAMKVMDKGMLAGRK 153
+ Q V +L + + K +G G+ G V L+ A+K + G ++
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 154 KLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQ 213
+ E I+ DHP + L K ++ E G L + ++ + Q
Sbjct: 62 RDFLG--EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 119
Query: 214 ATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++YL MG V+RDL N+L+ + +SDF LS
Sbjct: 120 LVGMLRG-IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 257 FDLS 260
F L+
Sbjct: 168 FGLA 171
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 306 QALA----HPYLEQ 315
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 226
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 227 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 133
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 257 FDLS 260
F L+
Sbjct: 173 FGLA 176
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 311 QALA----HPYLEQ 320
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 249
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 250 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 288
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 156
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDF 182
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 117 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 257 FDLS 260
F L+
Sbjct: 174 FGLA 177
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 311
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 312 QALA----HPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 108 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 257 FDLS 260
F L+
Sbjct: 165 FGLA 168
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 302
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 303 QALA----HPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 257 FDLS 260
F L+
Sbjct: 172 FGLA 175
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 310 QALA----HPYLEQ 319
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 149 LAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGK 208
L ++K M +E I+ LDHP + L E + + ++ME G+L +R
Sbjct: 50 LDNKEKFM---SEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS 105
Query: 209 HFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Y+ ++ A+ YL + V+RD+ N+LV + L DF LS
Sbjct: 106 -LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 257 FDLS 260
F L+
Sbjct: 166 FGLA 169
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 304 QALA----HPYLEQ 313
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 257 FDLS 260
F L+
Sbjct: 172 FGLA 175
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 34/132 (25%)
Query: 351 VGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APEI + G+ ++D W+ G E+L R F G + L ++G P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 407 -----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFKRG 440
L P + + + A DL+ +L +P KR+ ++
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 441 ATEIKQHPFFES 452
HP+ E
Sbjct: 312 LA----HPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 257 FDLS 260
F L+
Sbjct: 173 FGLA 176
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 34/132 (25%)
Query: 351 VGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APEI + G+ ++D W+ G E+L R F G + L ++G P
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 407 -----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFKRG 440
L P + + + A DL+ +L +P KR+ ++
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 441 ATEIKQHPFFES 452
HP+ E
Sbjct: 313 LA----HPYLEQ 320
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 257 FDLS 260
F L+
Sbjct: 170 FGLA 173
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 34/133 (25%)
Query: 350 FVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 406 P-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFKR 439
P L P + + + A DL+ +L +P KR+ ++
Sbjct: 249 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 308
Query: 440 GATEIKQHPFFES 452
HP+ E
Sbjct: 309 ALA----HPYLEQ 317
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 142
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 257 FDLS 260
F L+
Sbjct: 172 FGLA 175
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 310 QALA----HPYLEQ 319
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 257 FDLS 260
F L+
Sbjct: 166 FGLA 169
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
+V T Y APEI + G+ ++D W+ G E+L R F G + L +++G L
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-L 242
Query: 408 KFPEGSSISFAAKDLIRGLLVKDPQK 433
PE ++ R L+ P K
Sbjct: 243 GSPEQEDLNCIINLKARNYLLSLPHK 268
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 222
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 223 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNX 129
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPT 175
+ +LG G G V G + A+K + + + +K + + ++ D PF T
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV-DCPFTVT 97
Query: 176 LYSHF--ETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH-MM 232
Y E D + C + S + + G+ E A ++ ALE+LH +
Sbjct: 98 FYGALFREGDVWICXELXDTSLDKFYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
V++RD+KP NVL+ G + DF +S
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 257 FDLS 260
F L+
Sbjct: 188 FGLA 191
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 34/133 (25%)
Query: 350 FVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQ 405
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
Query: 406 P-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFKR 439
P L P + + + A DL+ +L +P KR+ ++
Sbjct: 267 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 326
Query: 440 GATEIKQHPFFES 452
HP+ E
Sbjct: 327 ALA----HPYLEQ 335
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 119 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 257 FDLS 260
F L+
Sbjct: 176 FGLA 179
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 313
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 314 QALA----HPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 257 FDLS 260
F L+
Sbjct: 168 FGLA 171
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 306 QALA----HPYLEQ 315
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q H S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 257 FDLS 260
F L+
Sbjct: 168 FGLA 171
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 306 QALA----HPYLEQ 315
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 345 ARSMSFVGTHEYLAPEIIRGDGHGS---AVDWWTFG-IFFYELLLGRTPFKGNGNRET-- 398
+R GT ++APE++ D + VD ++ G +F+Y + G PF + R+
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI 240
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWAL 457
L PE A++LI ++ DPQKR A + +HPFF S+ L
Sbjct: 241 LLGACSLDCLHPEKHE-DVIARELIEKMIAMDPQKR----PSAKHVLKHPFFWSLEKQL 294
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 160 TEREILSLLDHPFLPTLYSHFETDK---FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATR 216
+RE+ L + P + +F T+K F + +E C+ TL++ K F+
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA----TLQEYVEQKDFAHLGLE 119
Query: 217 --FYASEVLLALEYLHMMGVVYRDLKPENVLV---REDGHI--MLSDFDL 259
+ L +LH + +V+RDLKP N+L+ G I M+SDF L
Sbjct: 120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 225
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 226 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 132
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDF 158
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 222
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 223 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 129
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLK 408
F GT Y PE IR HG + W+ GI Y+++ G PF+ + ++ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 409 FPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV 453
F + +S + LIR L P R F+ EI+ HP+ + V
Sbjct: 228 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKL---MRAQTEREILSLLDHPF--L 173
LG G GSVY A+K ++K ++ +L R E +L + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 174 PTLYSHFET-DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L FE D F +L DL + E+ R + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 134
Query: 233 GVVYRDLKPENVLVRED-GHIMLSDF 257
GV++RD+K EN+L+ + G + L DF
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLP 174
LLK+LG G G V L + + + A+K++ +G ++ + AQT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 175 TLYSHFETDKFSCLLMEFCSGG-DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG 233
Y + ++ E+ S G L+ LR G S+ Y +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY--DVCEGMAFLESHQ 124
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL N LV D + +SDF ++
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMT 151
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 346 RSMSFVGTH---EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFN 401
+ +S VGT ++ APE+ + S D W FGI +E+ LG+ P+ N E +
Sbjct: 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
Query: 402 VV-GQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIK 445
V G L P +S + ++ + P+KR F++ + I+
Sbjct: 218 VSQGHRLYRPHLASDTIY--QIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAEL-----RDMGCLFAMKVM-DKGMLAGRKKLMRAQT 160
++ L R +++LG G VY L + A+K + DK R++ +
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF---RH 61
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP----GKHFSEQAT 215
E + + L HP + L D+ ++ +CS GDLH L R P G ++
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 216 R---------FYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ +++ +EYL VV++DL NVLV + ++ +SD L
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 83
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 144 KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 85
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 146 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 88
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 149 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 209 HFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ +E + +L+ ++Y+H G+++RDLKP N LV +D + + DF L+
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS-------- 220
DHP + Y TD+F + +E C+ L+ K+ S++ +
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVR-------------EDGHIMLSDFDL 259
++ + +LH + +++RDLKP+N+LV E+ I++SDF L
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 352 GTHEYLAPEIIRGDGH---GSAVDWWTFG-IFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
GT + APE++ ++D ++ G +F+Y L G+ PF +RE+ N++
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIF 269
Query: 408 KFPE-----GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
E S+ A DLI ++ DP KR A ++ +HP F
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKR----PTAMKVLRHPLF 313
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 117 KKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSLL- 168
K LG G G V LAE + A+K++ A K L +E E++ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIG 91
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--RQPG------------KHFSEQA 214
H + L D +++E+ S G+L Q R PG + S +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 275
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 276 NCTNELYMMMRDCWHAVPSQRPTFKQ 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS-------- 220
DHP + Y TD+F + +E C+ L+ K+ S++ +
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVR-------------EDGHIMLSDFDL 259
++ + +LH + +++RDLKP+N+LV E+ I++SDF L
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 352 GTHEYLAPEIIRGDGH---GSAVDWWTFG-IFFYELLLGRTPFKGNGNRETLFNVVGQPL 407
GT + APE++ ++D ++ G +F+Y L G+ PF +RE+ N++
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIF 269
Query: 408 KFPE-----GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
E S+ A DLI ++ DP KR A ++ +HP F
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKR----PTAMKVLRHPLF 313
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
LG G G VY L D G L A+K + + G + ++ QTE E++S+ H L L
Sbjct: 38 LGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGE--LQFQTEVEMISMAVHRNLLRLRG 94
Query: 179 HFETDKFSCLLMEFCSGGDLHT-LRQR---QPGKHFSEQATRFYASEVLLALEYLHMM-- 232
T L+ + + G + + LR+R QP + ++ S LA YLH
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA--YLHDHCD 152
Query: 233 -GVVYRDLKPENVLVREDGHIMLSDFDLS 260
+++RD+K N+L+ E+ ++ DF L+
Sbjct: 153 PKIIHRDVKAANILLDEEFEAVVGDFGLA 181
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V LAE + A+K++ A K L +E E++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 89
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQ--------------RQPGKHFSE 212
+ H + L D +++E+ S G+L Q P + S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ A +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE + + D W+FG+ +E+ LG +P+ G E LF ++ + + + S
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLKEGHRMDKPS 275
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKR 439
+ + ++R P +R FK+
Sbjct: 276 NCTNELYMMMRDCWHAVPSQRPTFKQ 301
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKLMRAQTERE 163
++ + ++ + +G G+ G V L+ G A+K + G +++ +E
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEAS 60
Query: 164 ILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVL 223
I+ DHP + L ++ EF G L + ++ G+ Q +
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG-IA 119
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++YL M V+R L N+LV + +SDF LS
Sbjct: 120 AGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS 156
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 340 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRET 398
++PT ++ + APE I+ SA D W++GI +E++ G P+ N++
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
Query: 399 LFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGF 437
+ N + Q + P A L+ KD R F
Sbjct: 224 I-NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 261
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS-------- 220
DHP + Y TD+F + +E C+ L+ K+ S++ +
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVR-------------EDGHIMLSDFDL 259
++ + +LH + +++RDLKP+N+LV E+ I++SDF L
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 352 GTHEYLAPEIIRGDGH-------GSAVDWWTFG-IFFYELLLGRTPFKGNGNRETLFNVV 403
GT + APE++ + ++D ++ G +F+Y L G+ PF +RE+ N++
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NII 251
Query: 404 GQPLKFPE-----GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
E S+ A DLI ++ DP KR A ++ +HP F
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR----PTAMKVLRHPLF 299
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 107 DLGLGHFRLLKKLGCGDIGSVYLA----------------ELRDMGCLFA-MKVMDKGML 149
D+ + L KK+G G G +YLA E ++ G LF+ +K +
Sbjct: 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQR--- 89
Query: 150 AGRKKLMRAQTEREILSLLDHP-FLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGK 208
+K ++ ER+ L L P F + + F+ + ++ME G DL + +
Sbjct: 90 VAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--G 146
Query: 209 HFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLV--REDGHIMLSDFDLSLRCFVS 266
F + +L LEY+H V+ D+K N+L+ + + L+D+ LS R +
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPN 206
Query: 267 PKLVQSSDDP 276
Q ++P
Sbjct: 207 GNHKQYQENP 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYAS-------- 220
DHP + Y TD+F + +E C+ L+ K+ S++ +
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVR-------------EDGHIMLSDFDL 259
++ + +LH + +++RDLKP+N+LV E+ I++SDF L
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 352 GTHEYLAPEIIRGDGH-------GSAVDWWTFG-IFFYELLLGRTPFKGNGNRETLFNVV 403
GT + APE++ + ++D ++ G +F+Y L G+ PF +RE+ N++
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NII 251
Query: 404 GQPLKFPE-----GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFF 450
E S+ A DLI ++ DP KR A ++ +HP F
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR----PTAMKVLRHPLF 299
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQME-----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A + L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEEDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ +
Sbjct: 77 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQME-----LDHER 128
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 238
Query: 403 VGQ 405
+ Q
Sbjct: 239 IEQ 241
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ + S
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMS--- 129
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 130 --YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
V T Y APE+I G G+ VD W+ G E++ G F G + + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ + S
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMS--- 129
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 130 --YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
V T Y APE+I G G+ VD W+ G E++ + F G + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ +
Sbjct: 81 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQME-----LDHER 132
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 183 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 242
Query: 403 VGQ 405
+ Q
Sbjct: 243 IEQ 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 208 KHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+H S ++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 34/134 (25%)
Query: 349 SFVGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVG 404
+V T Y APEI + G+ ++D W+ G E+L R F G + L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 405 QP-----------------LKFPEGSSISF---------AAKDLIRGLLVKDPQKRLGFK 438
P L P + + + A DL+ +L +P KR+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 439 RGATEIKQHPFFES 452
+ HP+ E
Sbjct: 310 QALA----HPYLEQ 319
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQME-----LDHER 127
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ + S
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMS--- 129
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 130 --YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ 405
V T Y APE+I G G+ VD W+ G E++ + F G + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ G F G + + V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 403 VGQ 405
+ Q
Sbjct: 238 IEQ 240
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 221 EVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 155 LMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQA 214
LM+ + I+ LL+ F P E + ++ME ++ + S
Sbjct: 70 LMKCVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMS--- 123
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ ++L +++LH G+++RDLKP N++V+ D + + DF L+
Sbjct: 124 --YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
TS +V T Y APE+I G G+ VD W+ G E++ + F G + V
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 231
Query: 403 VGQ 405
+ Q
Sbjct: 232 IEQ 234
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+RL +K+G G G +YL G A+K + + K + E +I ++
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-----LECVKTKHPQLHIESKIYKMMQGGV 65
Query: 173 -LPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+PT+ ++ ++ME S DL R+ FS + A +++ +EY+
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYI 121
Query: 230 HMMGVVYRDLKPENVLV---REDGHIMLSDFDLS 260
H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++E+ S G+L LR R+P G S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 23 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 77
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 78 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 28/180 (15%)
Query: 97 AVQCVKSKDGDLGLGHFRLLKK---LGCGDIGSV----YLAELRDMGCLFAMKVMDKGML 149
A++ + GD + H R LKK LG G G V Y G + A+K +
Sbjct: 14 ALEVLFQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-- 71
Query: 150 AGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSC---------LLMEFCSGGDLHT 200
AG + + E +IL L H H K C L+ME+ G +
Sbjct: 72 AGPQHRSGWKQEIDILRTLYH-------EHIIKYKGCCEDAGAASLQLVMEYVPLG---S 121
Query: 201 LRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
LR P +A ++ + YLH ++RDL NVL+ D + + DF L+
Sbjct: 122 LRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
+ V T Y APE+I G D W+ G +E +G T F+ + NRE L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 75
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+RL +K+G G G +YL G A+K+ + K + E +I ++
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQLHIESKIYKMMQGGV 63
Query: 173 -LPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+PT+ ++ ++ME S DL R+ FS + A +++ +EY+
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYI 119
Query: 230 HMMGVVYRDLKPENVLV---REDGHIMLSDFDLS 260
H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 24 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 78
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 79 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++ + S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 25 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 79
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 75
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 183 DKFSCLLMEFCSGGDLHTLRQR--QPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLK 240
+K+ ++ME+ LH + + + G+ Y ++ A+ ++H +G+ +RD+K
Sbjct: 110 NKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 241 PENVLVR-EDGHIMLSDF 257
P+N+LV +D + L DF
Sbjct: 169 PQNLLVNSKDNTLKLCDF 186
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 36/140 (25%)
Query: 344 SARSMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV 402
S S++ + + Y APE++ G + ++D W+ G F EL+LG+ F G + + L +
Sbjct: 195 SEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRI 254
Query: 403 V---GQPLK--------------------------FPEGSSISFAAKDLIRGLLVKDPQK 433
+ G P K PEG+ A DL+ +L +P
Sbjct: 255 IQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT--PSLAIDLLEQILRYEPDL 312
Query: 434 RLGFKRGATEIKQHPFFESV 453
R+ E HPFF+ +
Sbjct: 313 RI----NPYEAMAHPFFDHL 328
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 75
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 133
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 20 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 74
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 75 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 17 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 71
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 72 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 126
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 78
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 136
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE I + D W++GIF +EL LG +P+ G + ++ + +
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
D+++ DP KR FK+ I++ ES N
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ-ISESTN 311
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 16 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 70
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 71 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE I + D W++GIF +EL LG +P+ G + ++ + +
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
D+++ DP KR FK+ I++ ES N
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ-ISESTN 327
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 15 LKLVERLGAGQAGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE I + D W++GIF +EL LG +P+ G + ++ + +
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
D+++ DP KR FK+ I++ ES N
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ-ISESTN 329
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 134
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 55/145 (37%), Gaps = 46/145 (31%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF---NVVG- 404
+ V T Y APE+I G D W+ G E LG T F + ++E L ++G
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252
Query: 405 -----------------QPLKFPEGSS----ISFAAK-----------------DLIRGL 426
L + E SS +S A K DLI+ +
Sbjct: 253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKM 312
Query: 427 LVKDPQKRLGFKRGATEIKQHPFFE 451
L DP KR+ + E +HPFF+
Sbjct: 313 LEYDPAKRITLR----EALKHPFFD 333
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATRF-----YASEVLLALEYLHMMGVVYR 237
+++EFC G+L T LR ++ P K + Y+ +V +E+L ++R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 238 DLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCI 290
DL N+L+ E + + DF L+ + P V+ D R+ + P I
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD---ARLPLKWMAPETI 218
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE I + D W++GIF +EL LG +P+ G + ++ + +
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
D+++ DP KR FK+ I++ ES N
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ-ISESTN 334
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 75
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 133
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 132
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVVGQPLKFPEGS 413
+++APE I + D W++GIF +EL LG +P+ G + ++ + +
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 414 SISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN 454
D+++ DP KR FK+ I++ ES N
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ-ISESTN 334
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-------GCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
L K LG G G V +AE + A+K++ A K L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 168 L-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQP-GKHFSEQATRFYASEVLL 224
+ H + L D +++ + S G+L LR R+P G +S R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 225 ------------ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 135
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
DL+ L + Q S ++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKSQ---QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 257 FDLS 260
F L+
Sbjct: 188 FGLA 191
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 34/132 (25%)
Query: 351 VGTHEYLAPEI-IRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL---FNVVGQP 406
V T Y APEI + G+ ++D W+ G E+L R F G + L ++G P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 407 LK-----------------FPEGSSISFA---------AKDLIRGLLVKDPQKRLGFKRG 440
+ P + +++A A DL+ +L +P KR+ +
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVE-- 325
Query: 441 ATEIKQHPFFES 452
E HP+ E
Sbjct: 326 --EALAHPYLEQ 335
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 132
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 10 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 64
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 65 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++RDL+ N+LV + ++DF L+
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 112 HFRLLKK---LGCGDIGSV----YLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
H R LKK LG G G V Y G + A+K + +G G + Q E EI
Sbjct: 7 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEI 64
Query: 165 LSLLDHPFLPTLYSHFET--DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
L L H + E +K L+ME+ G +LR P +A ++
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQI 121
Query: 223 LLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ YLH ++R L NVL+ D + + DF L+
Sbjct: 122 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 132
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Query: 112 HFRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSL 167
R +K LG G G+VY + + ++ A+KV+ + K E +++
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK--EILDEAYVMAG 75
Query: 168 LDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE 227
+ P++ L T + G L +R+ + Q + ++ +
Sbjct: 76 VGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENR--GRLGSQDLLNWCMQIAKGMS 133
Query: 228 YLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
YL + +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 YLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 112 HFRLLKK---LGCGDIGSV----YLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
H R LKK LG G G V Y G + A+K + +G G + Q E EI
Sbjct: 6 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEI 63
Query: 165 LSLLDHPFLPTLYSHFET--DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEV 222
L L H + E +K L+ME+ G +LR P +A ++
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQI 120
Query: 223 LLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ YLH ++R L NVL+ D + + DF L+
Sbjct: 121 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 122
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQT 160
G++ LL++LG G G VY RD+ A+K +++ A ++ +
Sbjct: 11 GEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLN 68
Query: 161 EREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSE------- 212
E ++ + L + + ++ME + GDL + LR +P +
Sbjct: 69 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 128
Query: 213 QATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
Q A+E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 129 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV-----VGQPLKF 409
++APE ++ ++ D W+FG+ +E+ L P++G N + L V + QP
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 256
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ--HPFFESVNW 455
PE DL+R +P+ R F +K HP F V++
Sbjct: 257 PE------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 298
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATRF-----YASEVLLALEYLHMMGVVYR 237
+++EFC G+L T LR ++ P K + Y+ +V +E+L ++R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR 168
Query: 238 DLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
DL N+L+ E + + DF L+ + P V+ D
Sbjct: 169 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 122
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 356 YLAPEIIRG---DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEG 412
++APE ++ D + + D W+F + +EL+ PF N E V + L+
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 413 SSISFAAKDLIRGLLVKDPQKRLGF 437
IS L++ + +DP KR F
Sbjct: 234 PGISPHVSKLMKICMNEDPAKRPKF 258
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 126
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATR---------FYASEVLLALEYLHMMG 233
+++EFC G+L T LR ++ P K E + Y+ +V +E+L
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 170
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++RDL N+L+ E + + DF L+ + P V+ D
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 132
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLY 177
+G G+ G V A ++ G + A + E E+L L HP + L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQ--------------PGKHFSEQATRFYASEVL 223
E + L +E+ G+L ++ S Q +A++V
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++YL ++RDL N+LV E+ ++DF LS
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 159 QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGK----HFSEQ 213
Q E +++ D+P + L K CLL E+ + GDL+ LR P S+
Sbjct: 98 QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157
Query: 214 ATRF-----------------YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSD 256
+TR A +V + YL V+RDL N LV E+ + ++D
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD 217
Query: 257 FDLS 260
F LS
Sbjct: 218 FGLS 221
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRA--- 158
KS+ L K++G G G V+ L + A+K + G G +++
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 159 -QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDL-HTLRQRQPGKHFSEQATR 216
Q E I+S L+HP + LY ++MEF GDL H L + +S +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 217 FYASEVLLALEYLHMMG--VVYRDLKPENVLVR---EDGHI--MLSDFDLS 260
++ L +EY+ +V+RDL+ N+ ++ E+ + ++DF LS
Sbjct: 128 ML--DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
LL++LG G G VY RD+ A+K +++ A ++ + E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFT 78
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSE-------QATRFYASE 221
+ L + + ++ME + GDL + LR +P + Q A+E
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV-----VGQPLKF 409
++APE ++ ++ D W+FG+ +E+ L P++G N + L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ--HPFFESVNW 455
PE DL+R +P+ R F +K HP F V++
Sbjct: 258 PE------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
LL++LG G G VY RD+ A+K +++ A ++ + E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFT 78
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSE-------QATRFYASE 221
+ L + + ++ME + GDL + LR +P + Q A+E
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV-----VGQPLKF 409
++APE ++ ++ D W+FG+ +E+ L P++G N + L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ--HPFFESVNW 455
PE DL+R +P R F +K HP F V++
Sbjct: 258 PE------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLAGRKKLMRAQTEREI 164
+G RLL+KLG G G V E A+K + +L+ + + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 165 LSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLL 224
+ LDH L LY T + G L LR+ Q HF YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAE 122
Query: 225 ALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDL 259
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
LL++LG G G VY RD+ A+K +++ A ++ + E ++
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFT 75
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSE-------QATRFYASE 221
+ L + + ++ME + GDL + LR +P + Q A+E
Sbjct: 76 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 136 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV-----VGQPLKF 409
++APE ++ ++ D W+FG+ +E+ L P++G N + L V + QP
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 254
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ--HPFFESVNW 455
PE DL+R +P+ R F +K HP F V++
Sbjct: 255 PE------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 296
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLY 177
+G G+ G V A ++ G + A + E E+L L HP + L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQ--------------PGKHFSEQATRFYASEVL 223
E + L +E+ G+L ++ S Q +A++V
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++YL ++RDL N+LV E+ ++DF LS
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
+G G G VY LRD G A+K + + + +TE E LS HP L +L
Sbjct: 47 IGHGVFGKVYKGVLRD-GAKVALK---RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 179 HFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVY 236
+ L+ ++ G+L H P S + L YLH +++
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 237 RDLKPENVLVREDGHIMLSDFDLS 260
RD+K N+L+ E+ ++DF +S
Sbjct: 163 RDVKSINILLDENFVPKITDFGIS 186
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYS 178
+G G G VY LRD G A+K + + + +TE E LS HP L +L
Sbjct: 47 IGHGVFGKVYKGVLRD-GAKVALK---RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 179 HFETDKFSCLLMEFCSGGDL--HTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVY 236
+ L+ ++ G+L H P S + L YLH +++
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 237 RDLKPENVLVREDGHIMLSDFDLS 260
RD+K N+L+ E+ ++DF +S
Sbjct: 163 RDVKSINILLDENFVPKITDFGIS 186
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 99
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 100 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 157
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 134
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSV----YLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
R LK LG G G+V ++ E + +KV++ +GR+ + L
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSL 90
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
DH + L + G L +RQ + Q + ++ + Y
Sbjct: 91 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYY 148
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L G+V+R+L NVL++ + ++DF ++
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 135
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRA--- 158
KS+ L K++G G G V+ L + A+K + G G +++
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 159 -QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDL-HTLRQRQPGKHFSEQATR 216
Q E I+S L+HP + LY ++MEF GDL H L + +S +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 217 FYASEVLLALEYLHMMG--VVYRDLKPENVLVR 247
++ L +EY+ +V+RDL+ N+ ++
Sbjct: 128 ML--DIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRA----- 158
K+ D + +R+++ L G + L E +D +A+K +K +L ++ ++
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCE-KD-NKFYALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 159 ---------QTEREILSLLDHPFLPT-------------LYSHFETDKFSCLLMEFCSGG 196
+ E +I++ + + + T +Y + E D +++F
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS----ILKF---D 134
Query: 197 DLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM-MGVVYRDLKPENVLVREDGHIMLS 255
+ + + Q + VL + Y+H + +RD+KP N+L+ ++G + LS
Sbjct: 135 EYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLS 194
Query: 256 DF 257
DF
Sbjct: 195 DF 196
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 352 GTHEYLAPEIIRGDG--HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF-NVVGQPLK 408
GT+E++ PE + +G+ VD W+ GI Y + PF + LF N+ + ++
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 409 FP 410
+P
Sbjct: 272 YP 273
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 132
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 102 KSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRA--- 158
KS+ L K++G G G V+ L + A+K + G G +++
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 159 -QTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDL-HTLRQRQPGKHFSEQATR 216
Q E I+S L+HP + LY ++MEF GDL H L + +S +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 217 FYASEVLLALEYLHMMG--VVYRDLKPENVLVR 247
++ L +EY+ +V+RDL+ N+ ++
Sbjct: 128 ML--DIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 80
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 138
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 135
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 135
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 81
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 139
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
LL++LG G G VY RD+ A+K +++ A ++ + E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFT 78
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSE-------QATRFYASE 221
+ L + + ++ME + GDL + LR +P + Q A+E
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV-----VGQPLKF 409
++APE ++ ++ D W+FG+ +E+ L P++G N + L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ--HPFFESVNW 455
PE DL+R +P+ R F +K HP F V++
Sbjct: 258 PE------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 115 LLKKLGCGDIGSVYLAELRDM-----GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD 169
LL++LG G G VY RD+ A+K +++ A ++ + E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFT 78
Query: 170 HPFLPTLYSHFETDKFSCLLMEFCSGGDLHT-LRQRQPGKHFSE-------QATRFYASE 221
+ L + + ++ME + GDL + LR +P + Q A+E
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 222 VLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 356 YLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNV-----VGQPLKF 409
++APE ++ ++ D W+FG+ +E+ L P++G N + L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ--HPFFESVNW 455
PE DL+R +P+ R F +K HP F V++
Sbjct: 258 PE------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 84
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 142
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 134
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDF 257
L +V+RDL NVLV+ H+ ++DF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 134
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDF 257
L +V+RDL NVLV+ H+ ++DF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 132
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-P 171
FRL +K+G G G +YL A+K+ + + K + E +I +L
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-----KTKHPQLLYESKIYRILQGGT 63
Query: 172 FLPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+P + ++ L+M+ S DL R+ S + A +++ +E++
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK----LSLKTVLMLADQMINRVEFV 119
Query: 230 HMMGVVYRDLKPENVLV---REDGHIMLSDFDLS 260
H ++RD+KP+N L+ R + + DF L+
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSV----YLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
R LK LG G G+V ++ E + +KV++ +GR+ + L
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSL 72
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
DH + L + G L +RQ + Q + ++ + Y
Sbjct: 73 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYY 130
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L G+V+R+L NVL++ + ++DF ++
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+L+++LG G G V++ + A+K + +G ++ L A ++ L H
Sbjct: 11 LKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 65
Query: 173 LPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMM 232
L LY+ T + ++ E+ G L + G + A+++ + ++
Sbjct: 66 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 233 GVVYRDLKPENVLVREDGHIMLSDFDLS 260
++R+L+ N+LV + ++DF L+
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLA 152
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV 402
++ APE I D W+FGI E++ GR P+ G N E + N+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 78
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 136
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDF 257
L +V+RDL NVLV+ H+ ++DF
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATR---------FYASEVLLALEYLHMMG 233
+++EFC G+L T LR ++ P K E + Y+ +V +E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++RDL N+L+ E + + DF L+ + P V+ D
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
+ V T Y PE+I G D W+ G +E G T F+ + NRE L
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVL 245
R A ++ AL +LH + + DLKPEN+L
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENIL 164
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 68
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 126
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATR---------FYASEVLLALEYLHMMG 233
+++EFC G+L T LR ++ P K E + Y+ +V +E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++RDL N+L+ E + + DF L+ + P V+ D
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K LG G G+VY + E + A+K + + K E +++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 71
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T + G L +R+ + + Q + ++ + Y
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAEGMNY 129
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 218 YASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
Y+ +V +E+L ++RDL N+L+ E+ + + DF L+ + +P V+ D
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKGNGNRETLFNVV--GQPLKFPE 411
+++APE I + + D W++G+ +E+ LG +P+ G E + + G ++ PE
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPE 325
Query: 412 GSS 414
S+
Sbjct: 326 YST 328
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATR---------FYASEVLLALEYLHMMG 233
+++EFC G+L T LR ++ P K E + Y+ +V +E+L
Sbjct: 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 205
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++RDL N+L+ E + + DF L+ + P V+ D
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
+ V T Y PE+I G D W+ G +E G T F+ + NRE L
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVL 245
R A ++ AL +LH + + DLKPEN+L
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENIL 155
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETL 399
+ V T Y PE+I G D W+ G +E G T F+ + NRE L
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 215 TRFYASEVLLALEYLHMMGVVYRDLKPENVL 245
R A ++ AL +LH + + DLKPEN+L
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENIL 187
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF 172
+RL +K+G G G +YL G A+K+ + K + E + ++
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLE-----CVKTKHPQLHIESKFYKMMQGGV 65
Query: 173 -LPTLYSHFETDKFSCLLMEFC--SGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYL 229
+P++ ++ ++ME S DL R+ FS + A +++ +EY+
Sbjct: 66 GIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYI 121
Query: 230 HMMGVVYRDLKPENVLV---REDGHIMLSDFDLS 260
H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 25/195 (12%)
Query: 88 HKGNDMKW-DAVQCVKSKDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMG-----CLFAM 141
++GN + D Q ++ + + + K LG G G V A +G A+
Sbjct: 22 YEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV 81
Query: 142 KVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHT 200
K++ A K+ + +E +I+S L H + L ++ E+C GDL
Sbjct: 82 KMLKSTAHADEKEAL--MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 201 L--RQRQPGKHFS--------EQATR----FYASEVLLALEYLHMMGVVYRDLKPENVLV 246
R+R PG +S EQ + ++S+V + +L ++RD+ NVL+
Sbjct: 140 FLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 199
Query: 247 REDGHIM-LSDFDLS 260
+GH+ + DF L+
Sbjct: 200 -TNGHVAKIGDFGLA 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 113 FRLLKKLGCGDIGSVYLAELRDMG--CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH 170
F+ +K LG G G+VY G + +M+ K E +++ +D+
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 171 PFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLH 230
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE 168
Query: 231 MMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 169 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATR---------FYASEVLLALEYLHMMG 233
++ EFC G+L T LR ++ P K E + Y+ +V +E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++RDL N+L+ E + + DF L+ + P V+ D
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 119 LGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLY 177
+G G+ G V A ++ G + A + E E+L L HP + L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 178 SHFETDKFSCLLMEFCSGGDLHTLRQRQ--------------PGKHFSEQATRFYASEVL 223
E + L +E+ G+L ++ S Q +A++V
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 224 LALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
++YL ++R+L N+LV E+ ++DF LS
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 188 LLMEFCSGGDLHT-LRQRQ----PGKHFSEQATR---------FYASEVLLALEYLHMMG 233
++ EFC G+L T LR ++ P K E + Y+ +V +E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 234 VVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD 274
++RDL N+L+ E + + DF L+ + P V+ D
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELL-LGRTPFKG 392
+++APE I + D W+FG+ +E+ LG +P+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 113 FRLLKKLGCGDIGSVY----LAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL 168
F+ +K L G G+VY + E + A+K + + K E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 81
Query: 169 DHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEY 228
D+P + L T ++ G L +R+ + + Q + ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNY 139
Query: 229 LHMMGVVYRDLKPENVLVREDGHIMLSDFDLS 260
L +V+RDL NVLV+ H+ ++DF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 46/145 (31%)
Query: 349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF---NVVG- 404
+ V Y APE+I G D W+ G E LG T F + ++E L ++G
Sbjct: 193 TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252
Query: 405 -----------------QPLKFPEGSS----ISFAAK-----------------DLIRGL 426
L + E SS +S A K DLI+ +
Sbjct: 253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKM 312
Query: 427 LVKDPQKRLGFKRGATEIKQHPFFE 451
L DP KR+ + E +HPFF+
Sbjct: 313 LEYDPAKRITLR----EALKHPFFD 333
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,301,525
Number of Sequences: 62578
Number of extensions: 582859
Number of successful extensions: 4041
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 1086
Number of HSP's gapped (non-prelim): 2082
length of query: 506
length of database: 14,973,337
effective HSP length: 103
effective length of query: 403
effective length of database: 8,527,803
effective search space: 3436704609
effective search space used: 3436704609
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)