Query         010603
Match_columns 506
No_of_seqs    472 out of 2936
Neff          8.4 
Searched_HMMs 13730
Date          Mon Mar 25 10:21:36 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010603.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010603hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 4.1E-67   3E-71  528.2  32.1  280  108-468     2-284 (337)
  2 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 6.5E-67 4.7E-71  515.9  28.2  278  111-467     8-287 (288)
  3 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 2.5E-65 1.8E-69  511.3  33.0  275  109-467     2-279 (316)
  4 d2j4za1 d.144.1.7 (A:126-388)  100.0 2.7E-65   2E-69  497.9  27.1  258  108-452     3-260 (263)
  5 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 6.3E-64 4.6E-68  507.9  35.1  279  108-470    38-319 (350)
  6 d1xjda_ d.144.1.7 (A:) Protein 100.0 8.4E-64 6.1E-68  501.1  29.1  274  110-468     1-278 (320)
  7 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 6.5E-64 4.7E-68  490.1  24.7  260  110-452     4-265 (271)
  8 d1omwa3 d.144.1.7 (A:186-549)  100.0 8.8E-63 6.4E-67  502.1  30.9  279  108-469     1-289 (364)
  9 d1yhwa1 d.144.1.7 (A:249-541)  100.0 3.2E-63 2.3E-67  490.4  26.5  255  111-452    20-275 (293)
 10 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 4.5E-63 3.3E-67  496.7  20.8  263  107-456     2-307 (322)
 11 d2jfla1 d.144.1.7 (A:21-308) S 100.0 1.8E-62 1.3E-66  484.2  24.5  257  111-452    12-274 (288)
 12 d1jksa_ d.144.1.7 (A:) Death-a 100.0 5.8E-62 4.2E-66  482.3  28.1  264  111-458    10-282 (293)
 13 d1koaa2 d.144.1.7 (A:5915-6264 100.0 7.6E-62 5.5E-66  492.4  29.5  263  109-457    24-290 (350)
 14 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 4.5E-62 3.3E-66  485.7  25.6  257  110-452     8-269 (307)
 15 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0   6E-62 4.4E-66  485.0  25.9  254  112-452    16-272 (309)
 16 d2java1 d.144.1.7 (A:3-271) Se 100.0 4.4E-62 3.2E-66  476.9  24.2  257  111-450     4-269 (269)
 17 d1koba_ d.144.1.7 (A:) Twitchi 100.0 4.7E-61 3.4E-65  486.9  28.8  258  110-453    28-289 (352)
 18 d1t4ha_ d.144.1.7 (A:) Protein 100.0 7.4E-61 5.4E-65  468.3  29.0  252  113-451    11-270 (270)
 19 d1phka_ d.144.1.7 (A:) gamma-s 100.0 1.3E-59 9.6E-64  461.1  28.9  259  110-452     2-275 (277)
 20 d1tkia_ d.144.1.7 (A:) Titin,  100.0 9.2E-60 6.7E-64  472.0  24.3  256  110-452     4-263 (321)
 21 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 1.1E-59 8.1E-64  467.1  23.7  257  115-454     2-287 (299)
 22 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 1.2E-58 8.7E-63  459.5  26.7  262  110-454     1-290 (298)
 23 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.8E-58 1.3E-62  465.1  23.6  255  108-452     8-277 (335)
 24 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 1.7E-58 1.2E-62  452.6  21.7  251  111-454     4-262 (273)
 25 d1opja_ d.144.1.7 (A:) Abelson 100.0 3.5E-58 2.5E-62  453.5  23.6  258  105-446    11-268 (287)
 26 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 1.2E-57 8.6E-62  447.6  23.8  260  111-450     7-272 (277)
 27 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 2.9E-57 2.1E-61  454.9  25.5  261  106-447    32-320 (325)
 28 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 3.6E-57 2.6E-61  450.0  25.9  262  110-455     6-301 (305)
 29 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 1.4E-57   1E-61  456.3  22.1  273  108-460    21-305 (322)
 30 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 3.7E-57 2.7E-61  442.7  23.0  260  105-451     7-269 (272)
 31 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 3.4E-57 2.5E-61  443.7  22.5  258  105-447     2-266 (276)
 32 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 1.4E-56 1.1E-60  441.7  25.2  258  110-452     1-286 (286)
 33 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 2.3E-56 1.7E-60  442.9  25.7  263  105-447    20-286 (299)
 34 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 3.2E-56 2.3E-60  451.2  25.4  257  110-455    17-309 (346)
 35 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 5.2E-56 3.8E-60  432.5  24.8  251  110-447     4-255 (263)
 36 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 3.2E-56 2.4E-60  437.1  22.0  254  117-453    13-272 (277)
 37 d3blha1 d.144.1.7 (A:8-325) Ce 100.0   9E-56 6.5E-60  442.6  25.5  263  110-452     9-310 (318)
 38 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 1.5E-55 1.1E-59  447.0  27.1  254  112-454    21-310 (350)
 39 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 1.6E-55 1.1E-59  433.7  25.9  263  109-451     6-272 (285)
 40 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 3.2E-55 2.3E-59  440.5  26.6  254  110-456    34-328 (328)
 41 d1fmka3 d.144.1.7 (A:249-533)  100.0 1.7E-55 1.2E-59  433.4  23.4  262  104-452    10-274 (285)
 42 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 2.1E-55 1.5E-59  426.8  23.7  251  110-447     3-254 (258)
 43 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 1.8E-54 1.3E-58  427.5  29.8  260  110-453     1-289 (292)
 44 d1pmea_ d.144.1.7 (A:) MAP kin 100.0   1E-54 7.5E-59  439.9  25.8  259  111-453     8-301 (345)
 45 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 2.6E-54 1.9E-58  424.9  27.6  258  107-446     3-265 (283)
 46 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 2.2E-54 1.6E-58  423.3  25.3  257  106-447     2-262 (273)
 47 d1u46a_ d.144.1.7 (A:) Activat 100.0 1.3E-54 9.1E-59  424.8  22.1  258  109-446     6-267 (273)
 48 d1ywna1 d.144.1.7 (A:818-1166) 100.0   2E-54 1.4E-58  429.2  23.2  260  107-447     9-290 (299)
 49 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 1.8E-54 1.3E-58  438.4  22.9  255  111-453    18-307 (348)
 50 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 1.1E-54 8.2E-59  441.3  21.1  259  109-455    15-319 (355)
 51 d1byga_ d.144.1.7 (A:) Carboxy 100.0 2.2E-54 1.6E-58  420.4  20.9  249  106-446     2-252 (262)
 52 d1xkka_ d.144.1.7 (A:) EGF rec 100.0   1E-53 7.4E-58  427.5  25.9  253  111-447     9-266 (317)
 53 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 5.2E-53 3.8E-57  419.3  25.4  259  106-446     8-294 (301)
 54 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0   5E-53 3.7E-57  421.0  23.8  255  108-447     7-279 (309)
 55 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0   1E-52 7.4E-57  416.8  25.6  259  106-446     8-289 (299)
 56 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 1.5E-52 1.1E-56  417.9  24.3  260  106-446    18-300 (311)
 57 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 3.9E-52 2.8E-56  414.3  24.5  266  105-452    14-299 (308)
 58 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 1.9E-50 1.4E-54  402.3  26.3  253  114-447    30-287 (311)
 59 d1ckia_ d.144.1.7 (A:) Casein  100.0 3.3E-51 2.4E-55  405.8  19.0  262  111-450     7-278 (299)
 60 d1csna_ d.144.1.7 (A:) Casein  100.0 1.7E-49 1.2E-53  392.3  27.2  252  109-437     3-266 (293)
 61 d1vjya_ d.144.1.7 (A:) Type I  100.0   5E-49 3.7E-53  390.7  22.5  248  111-446     3-290 (303)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 3.5E-48 2.6E-52  393.8  24.0  262  105-454     6-335 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 7.3E-28 5.3E-32  221.4  13.5  135  113-262     2-151 (191)
 64 d1j7la_ d.144.1.6 (A:) Type II  98.7 4.3E-08 3.1E-12   91.9  11.5  139  111-261    14-212 (263)
 65 d2pula1 d.144.1.6 (A:5-396) Me  98.2 3.2E-06 2.3E-10   84.0  11.6   80  116-197    31-117 (392)
 66 d1nd4a_ d.144.1.6 (A:) Aminogl  98.1 4.3E-06 3.1E-10   77.3   9.9  137  118-261    17-204 (255)
 67 d1nw1a_ d.144.1.8 (A:) Choline  97.4 0.00027 1.9E-08   69.6  10.5   78  111-198    43-128 (395)
 68 d1zyla1 d.144.1.6 (A:4-328) Rd  97.2 0.00055   4E-08   65.4  10.3   69  124-197    35-110 (325)
 69 d2ppqa1 d.144.1.6 (A:5-320) Ho  97.0  0.0023 1.7E-07   60.3  11.8  147  108-261    15-212 (316)
 70 d1e7ua4 d.144.1.4 (A:726-1094)  54.3      72  0.0052   29.0  12.9   25  237-261   220-244 (369)
 71 d1cjaa_ d.144.1.3 (A:) Actin-f  51.7      21  0.0015   32.2   7.9   73  185-259   156-234 (342)
 72 d1bo1a_ d.143.1.2 (A:) Phospha  36.7      48  0.0035   30.5   8.3  113  116-234    94-243 (383)

No 1  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.1e-67  Score=528.21  Aligned_cols=280  Identities=38%  Similarity=0.715  Sum_probs=250.2

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSC  187 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  187 (506)
                      +.+++|++++.||+|+||+||+|+++.+|+.||||++++...........+.+|+.+|+.++|||||+++++|++++.+|
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence            56789999999999999999999999999999999999877666667788899999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCC
Q 010603          188 LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP  267 (506)
Q Consensus       188 lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~  267 (506)
                      +|||||+||+|.+++...  +.++|..++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+..... 
T Consensus        82 iv~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~-  158 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-  158 (337)
T ss_dssp             EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred             cceeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccC-
Confidence            999999999999998876  68999999999999999999999999999999999999999999999999998542110 


Q ss_pred             ccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCc
Q 010603          268 KLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARS  347 (506)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (506)
                                                                                                  ....
T Consensus       159 ----------------------------------------------------------------------------~~~~  162 (337)
T d1o6la_         159 ----------------------------------------------------------------------------GATM  162 (337)
T ss_dssp             ----------------------------------------------------------------------------TCCB
T ss_pred             ----------------------------------------------------------------------------Cccc
Confidence                                                                                        0112


Q ss_pred             cccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHh
Q 010603          348 MSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLL  427 (506)
Q Consensus       348 ~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L  427 (506)
                      ...+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+.+..+....+.+|.  .+++++++||.+||
T Consensus       163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~dli~~~L  240 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGLL  240 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHT
T ss_pred             ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCc--cCCHHHHHHHHhhc
Confidence            3458999999999999999999999999999999999999999999998888888888888776  69999999999999


Q ss_pred             hcCCCCccCCCC-ChHHhhcCCCCCCCCcchhc--cCCCCCCCC
Q 010603          428 VKDPQKRLGFKR-GATEIKQHPFFESVNWALIR--STHPPEIPK  468 (506)
Q Consensus       428 ~~dP~~R~s~~~-~a~ell~hp~f~~~~~~~~~--~~~~~~~p~  468 (506)
                      ++||.+|++..+ +++|+++||||+.++|..+.  ...||..|.
T Consensus       241 ~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~  284 (337)
T d1o6la_         241 KKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ  284 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             cCCchhhcccccccHHHHHcCcccccCCHHHHHhCCCCCCCCCC
Confidence            999999997532 58999999999999998663  334555554


No 2  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-67  Score=515.92  Aligned_cols=278  Identities=35%  Similarity=0.632  Sum_probs=244.8

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLM  190 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  190 (506)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+++|+.++|||||+++++|++++.+||||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            56999999999999999999999999999999998876655666778899999999999999999999999999999999


Q ss_pred             eecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCccc
Q 010603          191 EFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLV  270 (506)
Q Consensus       191 E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~~  270 (506)
                      |||+||+|.+++...  +.+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+....   
T Consensus        88 Ey~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~---  162 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES---  162 (288)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             EccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCC---
Confidence            999999999988876  679999999999999999999999999999999999999999999999999986421100   


Q ss_pred             cCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCcccc
Q 010603          271 QSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMSF  350 (506)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (506)
                                                                                              ......+.
T Consensus       163 ------------------------------------------------------------------------~~~~~~~~  170 (288)
T d1uu3a_         163 ------------------------------------------------------------------------KQARANSF  170 (288)
T ss_dssp             -------------------------------------------------------------------------------C
T ss_pred             ------------------------------------------------------------------------cccccccc
Confidence                                                                                    01112345


Q ss_pred             ccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 010603          351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKD  430 (506)
Q Consensus       351 ~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~d  430 (506)
                      +||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+.+.++....+.+|.  .+++++++||.+||+.|
T Consensus       171 ~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~d  248 (288)
T d1uu3a_         171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLD  248 (288)
T ss_dssp             CCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT--TCCHHHHHHHHTTSCSS
T ss_pred             cCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc--cCCHHHHHHHHHHccCC
Confidence            7999999999999999999999999999999999999999999988888899888877775  69999999999999999


Q ss_pred             CCCccCCCC--ChHHhhcCCCCCCCCcchhccCCCCCCC
Q 010603          431 PQKRLGFKR--GATEIKQHPFFESVNWALIRSTHPPEIP  467 (506)
Q Consensus       431 P~~R~s~~~--~a~ell~hp~f~~~~~~~~~~~~~~~~p  467 (506)
                      |.+|||+.+  ...++++||||++++|+.+....||.+|
T Consensus       249 P~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~~pP~l~  287 (288)
T d1uu3a_         249 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT  287 (288)
T ss_dssp             GGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCCC
T ss_pred             HhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcCCCCCCC
Confidence            999998421  1234799999999999998887777665


No 3  
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.5e-65  Score=511.30  Aligned_cols=275  Identities=35%  Similarity=0.723  Sum_probs=246.3

Q ss_pred             ccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 010603          109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCL  188 (506)
Q Consensus       109 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  188 (506)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++++.........+.+.+|+.+|+.++|||||++++++.+++.+|+
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence            46789999999999999999999999999999999988766656667788999999999999999999999999999999


Q ss_pred             EEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCc
Q 010603          189 LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK  268 (506)
Q Consensus       189 V~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~  268 (506)
                      |||||.||+|..++...  ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+....   
T Consensus        82 vmE~~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~---  156 (316)
T d1fota_          82 IMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---  156 (316)
T ss_dssp             EECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred             EeeecCCcccccccccc--ccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc---
Confidence            99999999999988876  6789999999999999999999999999999999999999999999999999854210   


Q ss_pred             cccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCcc
Q 010603          269 LVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSM  348 (506)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (506)
                                                                                                   ...
T Consensus       157 -----------------------------------------------------------------------------~~~  159 (316)
T d1fota_         157 -----------------------------------------------------------------------------VTY  159 (316)
T ss_dssp             -----------------------------------------------------------------------------CBC
T ss_pred             -----------------------------------------------------------------------------ccc
Confidence                                                                                         012


Q ss_pred             ccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010603          349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLV  428 (506)
Q Consensus       349 ~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~  428 (506)
                      +.+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+.+.++......+|.  .+++++++||.+||.
T Consensus       160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~  237 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP--FFNEDVKDLLSRLIT  237 (316)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTC
T ss_pred             cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhh
Confidence            347999999999999999999999999999999999999999999998988898888777765  699999999999999


Q ss_pred             cCCCCccCC-CCChHHhhcCCCCCCCCcchhc--cCCCCCCC
Q 010603          429 KDPQKRLGF-KRGATEIKQHPFFESVNWALIR--STHPPEIP  467 (506)
Q Consensus       429 ~dP~~R~s~-~~~a~ell~hp~f~~~~~~~~~--~~~~~~~p  467 (506)
                      .||.+|++. .++++++|+||||++++|+.+.  ...+|..|
T Consensus       238 ~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p  279 (316)
T d1fota_         238 RDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP  279 (316)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCC
T ss_pred             hCHHhccccchhhHHHHHcCcccccCCHHHHHhCCCCcCCCC
Confidence            999999753 3479999999999999998663  33445444


No 4  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-65  Score=497.91  Aligned_cols=258  Identities=34%  Similarity=0.571  Sum_probs=234.8

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSC  187 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  187 (506)
                      +.+++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+++|+.++|||||++++++.+++.+|
T Consensus         3 ~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   82 (263)
T d2j4za1           3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   82 (263)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             cchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEE
Confidence            45788999999999999999999999999999999998876665666777889999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCC
Q 010603          188 LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP  267 (506)
Q Consensus       188 lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~  267 (506)
                      ||||||+||+|.+++...  ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....  
T Consensus        83 ivmEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~--  158 (263)
T d2j4za1          83 LILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--  158 (263)
T ss_dssp             EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC--
T ss_pred             EEEeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCC--
Confidence            999999999999998875  5799999999999999999999999999999999999999999999999999843110  


Q ss_pred             ccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCc
Q 010603          268 KLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARS  347 (506)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (506)
                                                                                                   ...
T Consensus       159 -----------------------------------------------------------------------------~~~  161 (263)
T d2j4za1         159 -----------------------------------------------------------------------------SRR  161 (263)
T ss_dssp             -----------------------------------------------------------------------------CCC
T ss_pred             -----------------------------------------------------------------------------Ccc
Confidence                                                                                         011


Q ss_pred             cccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHh
Q 010603          348 MSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLL  427 (506)
Q Consensus       348 ~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L  427 (506)
                      ...+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+.+.++....+.+|.  .+++++++||.+||
T Consensus       162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L  239 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--FVTEGARDLISRLL  239 (263)
T ss_dssp             EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT--TSCHHHHHHHHHHT
T ss_pred             cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCc--cCCHHHHHHHHHHc
Confidence            2347999999999999999999999999999999999999999999888888888888777775  69999999999999


Q ss_pred             hcCCCCccCCCCChHHhhcCCCCCC
Q 010603          428 VKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       428 ~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      +.||.+|||    ++|+|+||||+.
T Consensus       240 ~~dp~~R~t----~~eil~hp~~~~  260 (263)
T d2j4za1         240 KHNPSQRPM----LREVLEHPWITA  260 (263)
T ss_dssp             CSSGGGSCC----HHHHHTCHHHHH
T ss_pred             cCCHhHCcC----HHHHHcCcCcCC
Confidence            999999997    999999999963


No 5  
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=6.3e-64  Score=507.88  Aligned_cols=279  Identities=37%  Similarity=0.675  Sum_probs=248.3

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSC  187 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  187 (506)
                      ..+++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+|+.++|||||+++++|.+...+|
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccc
Confidence            34578999999999999999999999999999999998876665666778899999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCC
Q 010603          188 LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSP  267 (506)
Q Consensus       188 lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~  267 (506)
                      +||||+.||+|..++...  +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.+..  
T Consensus       118 ~v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~--  193 (350)
T d1rdqe_         118 MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--  193 (350)
T ss_dssp             EEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred             cccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc--
Confidence            999999999999998876  5799999999999999999999999999999999999999999999999999964210  


Q ss_pred             ccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCc
Q 010603          268 KLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARS  347 (506)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (506)
                                                                                                    ..
T Consensus       194 ------------------------------------------------------------------------------~~  195 (350)
T d1rdqe_         194 ------------------------------------------------------------------------------RT  195 (350)
T ss_dssp             ------------------------------------------------------------------------------CB
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          01


Q ss_pred             cccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHh
Q 010603          348 MSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLL  427 (506)
Q Consensus       348 ~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L  427 (506)
                      ...+||+.|||||++.+..|+.++|||||||+||||+||++||.+.+....+.++......+|.  .+++++.+||.+||
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L  273 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLL  273 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TCCHHHHHHHHHHS
T ss_pred             ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCc--cCCHHHHHHHHHHh
Confidence            2347999999999999999999999999999999999999999999888888888887777665  69999999999999


Q ss_pred             hcCCCCcc-CCCCChHHhhcCCCCCCCCcchhc--cCCCCCCCCCC
Q 010603          428 VKDPQKRL-GFKRGATEIKQHPFFESVNWALIR--STHPPEIPKPV  470 (506)
Q Consensus       428 ~~dP~~R~-s~~~~a~ell~hp~f~~~~~~~~~--~~~~~~~p~~~  470 (506)
                      ..||.+|+ +.++++++||+||||++++|..+.  ...+|.+|...
T Consensus       274 ~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~  319 (350)
T d1rdqe_         274 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK  319 (350)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             hhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCC
Confidence            99999996 445679999999999999998653  33556666543


No 6  
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.4e-64  Score=501.06  Aligned_cols=274  Identities=37%  Similarity=0.752  Sum_probs=237.0

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHH-hcCCCCccceeEEEEeCCeEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS-LLDHPFLPTLYSHFETDKFSCL  188 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~-~l~hpnIv~l~~~~~~~~~~~l  188 (506)
                      +++|++++.||+|+||+||+|+++.+|+.||||++++...........+..|+.++. .++|||||++++++++++.+||
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence            468999999999999999999999999999999998876555555666677777765 6899999999999999999999


Q ss_pred             EEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCc
Q 010603          189 LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPK  268 (506)
Q Consensus       189 V~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~  268 (506)
                      |||||+||+|.+++...  ..+++..++.++.||+.||+|||++|||||||||+|||++.+|++||+|||+|+.....  
T Consensus        81 vmEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~--  156 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--  156 (320)
T ss_dssp             EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred             EEeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc--
Confidence            99999999999999876  67999999999999999999999999999999999999999999999999998532110  


Q ss_pred             cccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCcc
Q 010603          269 LVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSM  348 (506)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (506)
                                                                                                 ....+
T Consensus       157 ---------------------------------------------------------------------------~~~~~  161 (320)
T d1xjda_         157 ---------------------------------------------------------------------------DAKTN  161 (320)
T ss_dssp             ---------------------------------------------------------------------------TCCBC
T ss_pred             ---------------------------------------------------------------------------ccccc
Confidence                                                                                       01122


Q ss_pred             ccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010603          349 SFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLV  428 (506)
Q Consensus       349 ~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~  428 (506)
                      ..+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+.+.++....+.+|.  .+++++++||.+||+
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~--~~s~~~~dli~~~L~  239 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--WLEKEAKDLLVKLFV  239 (320)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSC
T ss_pred             ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--cCCHHHHHHHHHhcc
Confidence            347999999999999999999999999999999999999999999988888888877777765  689999999999999


Q ss_pred             cCCCCccCCCCCh-HHhhcCCCCCCCCcchhc--cCCCCCCCC
Q 010603          429 KDPQKRLGFKRGA-TEIKQHPFFESVNWALIR--STHPPEIPK  468 (506)
Q Consensus       429 ~dP~~R~s~~~~a-~ell~hp~f~~~~~~~~~--~~~~~~~p~  468 (506)
                      .||.+||+    + .++++||||+.++|+.+.  ...||..|.
T Consensus       240 ~dP~~R~s----~~~~l~~hpff~~~~~~~l~~~~~~pp~~p~  278 (320)
T d1xjda_         240 REPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPK  278 (320)
T ss_dssp             SSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC-----
T ss_pred             cCCCCCcC----HHHHHHhCchhccCCHHHHHhcCCCCCCCCC
Confidence            99999998    5 489999999999998653  334555554


No 7  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-64  Score=490.10  Aligned_cols=260  Identities=25%  Similarity=0.423  Sum_probs=219.8

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      +++|++++.||+|+||+||+|+++.+|+.||||++++....  ...+++.+|+++|+.++|||||++++++.+++.+|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEE
Confidence            46799999999999999999999999999999999875432  2345678899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      ||||+||+|.+++...  ..+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....... 
T Consensus        82 mEy~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~-  158 (271)
T d1nvra_          82 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-  158 (271)
T ss_dssp             EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE-
T ss_pred             EeccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCc-
Confidence            9999999999998754  6799999999999999999999999999999999999999999999999999964311100 


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                                ......
T Consensus       159 --------------------------------------------------------------------------~~~~~~  164 (271)
T d1nvra_         159 --------------------------------------------------------------------------ERLLNK  164 (271)
T ss_dssp             --------------------------------------------------------------------------ECCBCC
T ss_pred             --------------------------------------------------------------------------cccccc
Confidence                                                                                      011234


Q ss_pred             cccCCCCccchhhcCCCC-CcchhHHHHHHHHHHHhcCCCCCCCCCcHHHH-HHHhCCCCCCCCCCCCCHHHHHHHHHHh
Q 010603          350 FVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETL-FNVVGQPLKFPEGSSISFAAKDLIRGLL  427 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~~~-~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~~~p~~~~~s~~~~~li~~~L  427 (506)
                      .+||+.|||||++.+..| +.++|||||||+||||++|++||......... ..+.......+....+++++++||.+||
T Consensus       165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  244 (271)
T d1nvra_         165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL  244 (271)
T ss_dssp             CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHS
T ss_pred             eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHc
Confidence            589999999999998876 67899999999999999999999876554333 3444444444444578999999999999


Q ss_pred             hcCCCCccCCCCChHHhhcCCCCCC
Q 010603          428 VKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       428 ~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      +.||++|||    ++|+|+||||+.
T Consensus       245 ~~dP~~R~t----~~eil~hpwf~~  265 (271)
T d1nvra_         245 VENPSARIT----IPDIKKDRWYNK  265 (271)
T ss_dssp             CSSTTTSCC----HHHHTTCTTTTC
T ss_pred             CCChhHCcC----HHHHhcCHhhCc
Confidence            999999997    999999999963


No 8  
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=8.8e-63  Score=502.07  Aligned_cols=279  Identities=34%  Similarity=0.626  Sum_probs=231.4

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHH---HHHHHHHHhcCCCCccceeEEEEeCC
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRA---QTEREILSLLDHPFLPTLYSHFETDK  184 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~---~~E~~il~~l~hpnIv~l~~~~~~~~  184 (506)
                      +.+++|++++.||+|+||+||+|+++.+|+.||||++.+...........+   ..|+.+++.++|||||+++++|.+++
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC
Confidence            467899999999999999999999999999999999987655433333333   34566777889999999999999999


Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccc
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF  264 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~  264 (506)
                      .+|||||||+||+|.+++...  ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+...
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             EEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            999999999999999999876  679999999999999999999999999999999999999999999999999985421


Q ss_pred             cCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCC
Q 010603          265 VSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTS  344 (506)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (506)
                      .                                                                               
T Consensus       159 ~-------------------------------------------------------------------------------  159 (364)
T d1omwa3         159 K-------------------------------------------------------------------------------  159 (364)
T ss_dssp             S-------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCccccccCCCCccchhhcC-CCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHH---HHHHhCCCCCCCCCCCCCHHHH
Q 010603          345 ARSMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRET---LFNVVGQPLKFPEGSSISFAAK  420 (506)
Q Consensus       345 ~~~~~~~GT~~Y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~p~~~~~s~~~~  420 (506)
                      ......+||+.|||||++.+ ..|+.++|||||||+||||+||+.||.+....+.   ...+......+|  ..++++++
T Consensus       160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~  237 (364)
T d1omwa3         160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP--DSFSPELR  237 (364)
T ss_dssp             SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCC--SSSCHHHH
T ss_pred             CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCC--CCCCHHHH
Confidence            01123479999999999975 5689999999999999999999999987654332   222333344444  36999999


Q ss_pred             HHHHHHhhcCCCCccCC-CCChHHhhcCCCCCCCCcchhc--cCCCCCCCCC
Q 010603          421 DLIRGLLVKDPQKRLGF-KRGATEIKQHPFFESVNWALIR--STHPPEIPKP  469 (506)
Q Consensus       421 ~li~~~L~~dP~~R~s~-~~~a~ell~hp~f~~~~~~~~~--~~~~~~~p~~  469 (506)
                      +||.+||+.||.+||++ ...|+|+|+||||++++|..+.  ...||.+|..
T Consensus       238 ~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~  289 (364)
T d1omwa3         238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPR  289 (364)
T ss_dssp             HHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCC
Confidence            99999999999999985 3458999999999999998653  3345555543


No 9  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-63  Score=490.39  Aligned_cols=255  Identities=25%  Similarity=0.402  Sum_probs=224.6

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLM  190 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  190 (506)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++...   ...+.+.+|+++|+.++|||||+++++|.+++.+||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC---hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            469999999999999999999999999999999986543   23456788999999999999999999999999999999


Q ss_pred             eecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCccc
Q 010603          191 EFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLV  270 (506)
Q Consensus       191 E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~~  270 (506)
                      |||+||+|.+++...   .+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.+...    
T Consensus        97 Ey~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~----  169 (293)
T d1yhwa1          97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE----  169 (293)
T ss_dssp             ECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST----
T ss_pred             EecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc----
Confidence            999999999988763   6999999999999999999999999999999999999999999999999998642110    


Q ss_pred             cCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCcccc
Q 010603          271 QSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMSF  350 (506)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (506)
                                                                                               .......
T Consensus       170 -------------------------------------------------------------------------~~~~~~~  176 (293)
T d1yhwa1         170 -------------------------------------------------------------------------QSKRSTM  176 (293)
T ss_dssp             -------------------------------------------------------------------------TCCBCCC
T ss_pred             -------------------------------------------------------------------------ccccccc
Confidence                                                                                     0112234


Q ss_pred             ccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHhhc
Q 010603          351 VGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG-QPLKFPEGSSISFAAKDLIRGLLVK  429 (506)
Q Consensus       351 ~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~-~~~~~p~~~~~s~~~~~li~~~L~~  429 (506)
                      +||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+.+..+.. ....++.+..+++++++||.+||..
T Consensus       177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~  256 (293)
T d1yhwa1         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM  256 (293)
T ss_dssp             CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCS
T ss_pred             ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            799999999999999999999999999999999999999998888777766653 3334444457999999999999999


Q ss_pred             CCCCccCCCCChHHhhcCCCCCC
Q 010603          430 DPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       430 dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      ||.+|||    ++|+|+||||+.
T Consensus       257 dP~~R~s----~~eil~Hp~~~~  275 (293)
T d1yhwa1         257 DVEKRGS----AKELLQHQFLKI  275 (293)
T ss_dssp             STTTSCC----HHHHTTCGGGGG
T ss_pred             ChhHCcC----HHHHhcCHhhCC
Confidence            9999997    999999999974


No 10 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-63  Score=496.68  Aligned_cols=263  Identities=25%  Similarity=0.433  Sum_probs=220.6

Q ss_pred             CcccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 010603          107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFS  186 (506)
Q Consensus       107 ~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  186 (506)
                      ++..++|++++.||+|+||+||+|+++.+|+.||||++++...  .....++.+|+.+|+.++|||||+++++|.+++++
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~   79 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI   79 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC--TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3456789999999999999999999999999999999986532  34456788999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeEEccCCCCcEEEecCCCEEEeecCCcccccc
Q 010603          187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM-MGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFV  265 (506)
Q Consensus       187 ~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~  265 (506)
                      |||||||+||+|.+++.+.  +.+++..++.++.||+.||+|||+ +|||||||||+||||+.+|++||+|||+|+....
T Consensus        80 ~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_          80 SICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  157 (322)
T ss_dssp             EEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             EEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence            9999999999999999876  579999999999999999999997 5999999999999999999999999999964210


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                                                                                                     .
T Consensus       158 -------------------------------------------------------------------------------~  158 (322)
T d1s9ja_         158 -------------------------------------------------------------------------------S  158 (322)
T ss_dssp             -------------------------------------------------------------------------------H
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             CccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHH-------------------------
Q 010603          346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLF-------------------------  400 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~-------------------------  400 (506)
                      ...+.+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+...                         
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence            1224589999999999999999999999999999999999999997755432211                         


Q ss_pred             -----------------HHhCCCCCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCCcc
Q 010603          401 -----------------NVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA  456 (506)
Q Consensus       401 -----------------~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~~  456 (506)
                                       .+............++.++++||.+||+.||.+|||    |+|+|+||||+..+|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~L~Hpf~~~~~~~  307 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD----LKQLMVHAFIKRSDAE  307 (322)
T ss_dssp             -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHHHHHS
T ss_pred             ccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhhCHhhCcCCcc
Confidence                             011111000111247899999999999999999997    9999999999876654


No 11 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-62  Score=484.22  Aligned_cols=257  Identities=28%  Similarity=0.451  Sum_probs=224.0

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLM  190 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  190 (506)
                      +.|++++.||+|+||+||+|+++.+|+.||||++++..   ....+.+.+|+++|+.++|||||++++++.+++.+||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence            35999999999999999999999999999999998653   334456778999999999999999999999999999999


Q ss_pred             eecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCccc
Q 010603          191 EFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLV  270 (506)
Q Consensus       191 E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~~  270 (506)
                      |||+||+|.+++... .+.+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....    
T Consensus        89 Ey~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~----  163 (288)
T d2jfla1          89 EFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----  163 (288)
T ss_dssp             ECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH----
T ss_pred             ecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC----
Confidence            999999999987654 257999999999999999999999999999999999999999999999999998532100    


Q ss_pred             cCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCcccc
Q 010603          271 QSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMSF  350 (506)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (506)
                                                                                               .....+.
T Consensus       164 -------------------------------------------------------------------------~~~~~~~  170 (288)
T d2jfla1         164 -------------------------------------------------------------------------IQRRDSF  170 (288)
T ss_dssp             -------------------------------------------------------------------------HHHHTCC
T ss_pred             -------------------------------------------------------------------------ccccccc
Confidence                                                                                     0011234


Q ss_pred             ccCCCCccchhhc-----CCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCC-CCCCCCCCCCHHHHHHHH
Q 010603          351 VGTHEYLAPEIIR-----GDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQP-LKFPEGSSISFAAKDLIR  424 (506)
Q Consensus       351 ~GT~~Y~APE~l~-----~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~s~~~~~li~  424 (506)
                      +||+.|||||++.     +..|+.++|||||||+||||++|++||.+.+..+.+.++.... ..++....+++++++||.
T Consensus       171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~  250 (288)
T d2jfla1         171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK  250 (288)
T ss_dssp             CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHH
T ss_pred             ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHH
Confidence            7999999999984     4568999999999999999999999999998888888877553 334444578999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      +||+.||.+|||    ++|+|+||||+.
T Consensus       251 ~~L~~dp~~R~t----~~ell~hp~~~~  274 (288)
T d2jfla1         251 KCLEKNVDARWT----TSQLLQHPFVTV  274 (288)
T ss_dssp             HHSCSSTTTSCC----HHHHTTSGGGCC
T ss_pred             HHccCChhHCcC----HHHHhcCcccCC
Confidence            999999999997    999999999974


No 12 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.8e-62  Score=482.25  Aligned_cols=264  Identities=30%  Similarity=0.473  Sum_probs=229.6

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhch---hHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGR---KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSC  187 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  187 (506)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++......   ...+.+.+|+++|+.++|||||+++++|++++.+|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            569999999999999999999999999999999987644322   23567889999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCC----CEEEeecCCcccc
Q 010603          188 LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDG----HIMLSDFDLSLRC  263 (506)
Q Consensus       188 lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~----~vkl~DFGla~~~  263 (506)
                      ||||||+||+|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++.++    .+||+|||+|...
T Consensus        90 iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~  167 (293)
T d1jksa_          90 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  167 (293)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence            999999999999998876  5799999999999999999999999999999999999999877    5999999998542


Q ss_pred             ccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCC
Q 010603          264 FVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPT  343 (506)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (506)
                      ...                                                                             
T Consensus       168 ~~~-----------------------------------------------------------------------------  170 (293)
T d1jksa_         168 DFG-----------------------------------------------------------------------------  170 (293)
T ss_dssp             TTS-----------------------------------------------------------------------------
T ss_pred             CCC-----------------------------------------------------------------------------
Confidence            110                                                                             


Q ss_pred             CCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCC--CCCCCHHHHH
Q 010603          344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE--GSSISFAAKD  421 (506)
Q Consensus       344 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~s~~~~~  421 (506)
                       ......+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+.+.++......++.  ...++.++++
T Consensus       171 -~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  249 (293)
T d1jksa_         171 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKD  249 (293)
T ss_dssp             -CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHH
T ss_pred             -ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHH
Confidence             0112347999999999999999999999999999999999999999999999888888877666543  2468999999


Q ss_pred             HHHHHhhcCCCCccCCCCChHHhhcCCCCCCCCcchh
Q 010603          422 LIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALI  458 (506)
Q Consensus       422 li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~~~~  458 (506)
                      ||.+||+.||.+|||    ++|+|+||||+..+|...
T Consensus       250 li~~~L~~dP~~R~s----~~eil~hp~~~~~~~~~~  282 (293)
T d1jksa_         250 FIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQA  282 (293)
T ss_dssp             HHHTTSCSSGGGSCC----HHHHHHSTTTCC------
T ss_pred             HHHHHccCChhHCcC----HHHHhcCcccCCCChhHh
Confidence            999999999999997    999999999999888653


No 13 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=7.6e-62  Score=492.37  Aligned_cols=263  Identities=32%  Similarity=0.449  Sum_probs=231.8

Q ss_pred             ccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 010603          109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCL  188 (506)
Q Consensus       109 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  188 (506)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++.+...   ...+.+.+|+.+|+.|+|||||+++++|++++.+||
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i  100 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM  100 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccch---hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            46789999999999999999999999999999999987542   334567889999999999999999999999999999


Q ss_pred             EEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEec--CCCEEEeecCCccccccC
Q 010603          189 LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRE--DGHIMLSDFDLSLRCFVS  266 (506)
Q Consensus       189 V~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~--~~~vkl~DFGla~~~~~~  266 (506)
                      |||||+||+|.+++... ...+++..++.|+.||+.||+|||++|||||||||+||||+.  +|.+||+|||+|+.+...
T Consensus       101 vmE~~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         101 IYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             EECCCCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             EEEcCCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            99999999999988654 357999999999999999999999999999999999999964  578999999998542110


Q ss_pred             CccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCC
Q 010603          267 PKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSAR  346 (506)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (506)
                                                                                                    ..
T Consensus       180 ------------------------------------------------------------------------------~~  181 (350)
T d1koaa2         180 ------------------------------------------------------------------------------QS  181 (350)
T ss_dssp             ------------------------------------------------------------------------------SC
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          01


Q ss_pred             ccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCC--CCCCHHHHHHHH
Q 010603          347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEG--SSISFAAKDLIR  424 (506)
Q Consensus       347 ~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~  424 (506)
                      ....+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+.+.++......++..  ..+++++++||.
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  261 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR  261 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHH
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            223579999999999999999999999999999999999999999999888888888766555432  468999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhcCCCCCCCCcch
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQHPFFESVNWAL  457 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~~~  457 (506)
                      +||+.||.+|||    ++|+|+||||+..+|..
T Consensus       262 ~~L~~dP~~R~t----~~eil~hp~~~~~~~~~  290 (350)
T d1koaa2         262 KLLLADPNTRMT----IHQALEHPWLTPGNAPG  290 (350)
T ss_dssp             HHCCSSGGGSCC----HHHHHHSTTTSCTTCCS
T ss_pred             HHccCChhHCcC----HHHHhcCcccCCCCCCC
Confidence            999999999997    99999999999887653


No 14 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4.5e-62  Score=485.70  Aligned_cols=257  Identities=33%  Similarity=0.499  Sum_probs=214.7

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.....  ....+.+|+.+|+.++|||||+++++|++++.+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            356999999999999999999999999999999998765432  234577899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEe---cCCCEEEeecCCccccccC
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVR---EDGHIMLSDFDLSLRCFVS  266 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~---~~~~vkl~DFGla~~~~~~  266 (506)
                      ||||+||+|.+++...  +.+++..++.|+.||+.||+|||++|||||||||+|||+.   .++.+||+|||+|+.... 
T Consensus        86 mE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~-  162 (307)
T d1a06a_          86 MQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-  162 (307)
T ss_dssp             ECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             EeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC-
Confidence            9999999999999765  6799999999999999999999999999999999999995   478999999999853210 


Q ss_pred             CccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCC
Q 010603          267 PKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSAR  346 (506)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (506)
                                                                                                   ...
T Consensus       163 -----------------------------------------------------------------------------~~~  165 (307)
T d1a06a_         163 -----------------------------------------------------------------------------GSV  165 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -----------------------------------------------------------------------------CCe
Confidence                                                                                         001


Q ss_pred             ccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCC--CCCCCCHHHHHHHH
Q 010603          347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP--EGSSISFAAKDLIR  424 (506)
Q Consensus       347 ~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~s~~~~~li~  424 (506)
                      ..+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+....+....+......++  ....+++++++||.
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  245 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR  245 (307)
T ss_dssp             -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHH
Confidence            2235799999999999999999999999999999999999999999988888888887765554  33579999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      +||+.||.+|||    ++|+|+||||+.
T Consensus       246 ~~L~~dP~~R~s----~~eil~hp~~~~  269 (307)
T d1a06a_         246 HLMEKDPEKRFT----CEQALQHPWIAG  269 (307)
T ss_dssp             HHSCSSGGGSCC----HHHHHHSTTTTS
T ss_pred             HHccCCHhHCcC----HHHHhcCHhhCC
Confidence            999999999997    999999999975


No 15 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=6e-62  Score=485.03  Aligned_cols=254  Identities=26%  Similarity=0.365  Sum_probs=226.9

Q ss_pred             CeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 010603          112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLME  191 (506)
Q Consensus       112 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  191 (506)
                      .|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|+.++|||||++++++.+++.+|||||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            39999999999999999999999999999999988766556667788999999999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcccc
Q 010603          192 FCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQ  271 (506)
Q Consensus       192 ~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  271 (506)
                      ||.+|+|..++...  ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|....       
T Consensus        96 ~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~-------  166 (309)
T d1u5ra_          96 YCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-------  166 (309)
T ss_dssp             CCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS-------
T ss_pred             ecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccC-------
Confidence            99999998776654  679999999999999999999999999999999999999999999999999984310       


Q ss_pred             CCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccccc
Q 010603          272 SSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMSFV  351 (506)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (506)
                                                                                                .....+
T Consensus       167 --------------------------------------------------------------------------~~~~~~  172 (309)
T d1u5ra_         167 --------------------------------------------------------------------------PANSFV  172 (309)
T ss_dssp             --------------------------------------------------------------------------SBCCCC
T ss_pred             --------------------------------------------------------------------------CCCccc
Confidence                                                                                      011247


Q ss_pred             cCCCCccchhhcC---CCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010603          352 GTHEYLAPEIIRG---DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLV  428 (506)
Q Consensus       352 GT~~Y~APE~l~~---~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~  428 (506)
                      ||+.|||||++.+   ..|+.++|||||||+||||++|+.||.+.+..+.+..+.......+....+++++++||.+||+
T Consensus       173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~  252 (309)
T d1u5ra_         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ  252 (309)
T ss_dssp             SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTC
T ss_pred             cCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCc
Confidence            9999999999974   3589999999999999999999999999888888888776655444455789999999999999


Q ss_pred             cCCCCccCCCCChHHhhcCCCCCC
Q 010603          429 KDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       429 ~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      .||.+|||    ++|+|+||||..
T Consensus       253 ~dP~~Rpt----~~ell~Hp~~~~  272 (309)
T d1u5ra_         253 KIPQDRPT----SEVLLKHRFVLR  272 (309)
T ss_dssp             SSGGGSCC----HHHHTTCHHHHS
T ss_pred             CChhHCcC----HHHHHhCHHhcC
Confidence            99999997    999999999964


No 16 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-62  Score=476.87  Aligned_cols=257  Identities=24%  Similarity=0.373  Sum_probs=214.6

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCeEEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET--DKFSCL  188 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~l  188 (506)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+.... ....+.+.+|+++|+.++|||||++++++.+  .+.+||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            5699999999999999999999999999999999876543 3445678899999999999999999999864  567899


Q ss_pred             EEeecCCCChHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-----eEEccCCCCcEEEecCCCEEEeecCCcc
Q 010603          189 LMEFCSGGDLHTLRQRQ--PGKHFSEQATRFYASEVLLALEYLHMMG-----VVYRDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       189 V~E~~~gg~L~~~l~~~--~~~~~~e~~~~~i~~qil~aL~yLH~~g-----iiHrDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                      |||||+||+|.+++...  .+..+++..++.++.||+.||+|||++|     ||||||||+||||+.+|.+||+|||+|+
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            99999999999988642  2467999999999999999999999976     9999999999999999999999999986


Q ss_pred             ccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccC
Q 010603          262 RCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAE  341 (506)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (506)
                      .+...                                                                           
T Consensus       163 ~~~~~---------------------------------------------------------------------------  167 (269)
T d2java1         163 ILNHD---------------------------------------------------------------------------  167 (269)
T ss_dssp             HC------------------------------------------------------------------------------
T ss_pred             ecccC---------------------------------------------------------------------------
Confidence            42110                                                                           


Q ss_pred             CCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 010603          342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKD  421 (506)
Q Consensus       342 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~  421 (506)
                        .......+||+.|||||++.+..|+.++|||||||+||||+||+.||.+.+..+.+.++....... .+..+++++++
T Consensus       168 --~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~s~~l~~  244 (269)
T d2java1         168 --TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR-IPYRYSDELNE  244 (269)
T ss_dssp             ----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC-CCTTSCHHHHH
T ss_pred             --CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-CCcccCHHHHH
Confidence              001223579999999999999999999999999999999999999999988888887777654432 22379999999


Q ss_pred             HHHHHhhcCCCCccCCCCChHHhhcCCCC
Q 010603          422 LIRGLLVKDPQKRLGFKRGATEIKQHPFF  450 (506)
Q Consensus       422 li~~~L~~dP~~R~s~~~~a~ell~hp~f  450 (506)
                      ||.+||+.||.+||+    ++|+|+|||+
T Consensus       245 li~~~L~~dp~~Rps----~~ell~hp~i  269 (269)
T d2java1         245 IITRMLNLKDYHRPS----VEEILENPLI  269 (269)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHTSTTC
T ss_pred             HHHHHcCCChhHCcC----HHHHHhCCcC
Confidence            999999999999997    9999999995


No 17 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=4.7e-61  Score=486.90  Aligned_cols=258  Identities=31%  Similarity=0.460  Sum_probs=228.4

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++...   .....+.+|+++|+.|+|||||+++++|++++.+|||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv  104 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI  104 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4679999999999999999999999999999999987542   2345677899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEe--cCCCEEEeecCCccccccCC
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVR--EDGHIMLSDFDLSLRCFVSP  267 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~--~~~~vkl~DFGla~~~~~~~  267 (506)
                      ||||+||+|.+++... +..+++..++.|+.||+.||+|||++|||||||||+||||+  .+|.+||+|||+|+.+... 
T Consensus       105 mE~~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~-  182 (352)
T d1koba_         105 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-  182 (352)
T ss_dssp             EECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred             EEcCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCC-
Confidence            9999999999876654 35799999999999999999999999999999999999998  5789999999999642110 


Q ss_pred             ccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCc
Q 010603          268 KLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARS  347 (506)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (506)
                                                                                                   ...
T Consensus       183 -----------------------------------------------------------------------------~~~  185 (352)
T d1koba_         183 -----------------------------------------------------------------------------EIV  185 (352)
T ss_dssp             -----------------------------------------------------------------------------SCE
T ss_pred             -----------------------------------------------------------------------------Cce
Confidence                                                                                         012


Q ss_pred             cccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCC--CCCCCHHHHHHHHH
Q 010603          348 MSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE--GSSISFAAKDLIRG  425 (506)
Q Consensus       348 ~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~s~~~~~li~~  425 (506)
                      ....||+.|||||++.+..|+.++|||||||+||||+||++||.+.+..+.+.++......++.  ...+++++++||.+
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  265 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN  265 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHT
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHH
Confidence            2347999999999999999999999999999999999999999999998888888877665553  24799999999999


Q ss_pred             HhhcCCCCccCCCCChHHhhcCCCCCCC
Q 010603          426 LLVKDPQKRLGFKRGATEIKQHPFFESV  453 (506)
Q Consensus       426 ~L~~dP~~R~s~~~~a~ell~hp~f~~~  453 (506)
                      ||+.||.+|||    ++|+|+||||+..
T Consensus       266 ~L~~dp~~R~s----~~eil~Hp~~~~~  289 (352)
T d1koba_         266 LLQKEPRKRLT----VHDALEHPWLKGD  289 (352)
T ss_dssp             TSCSSGGGSCC----HHHHHTSTTTSSC
T ss_pred             HccCChhHCcC----HHHHhcCHhhCCC
Confidence            99999999997    9999999999864


No 18 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.4e-61  Score=468.26  Aligned_cols=252  Identities=22%  Similarity=0.392  Sum_probs=214.5

Q ss_pred             eEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe----CCeEEE
Q 010603          113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET----DKFSCL  188 (506)
Q Consensus       113 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~l  188 (506)
                      |++.++||+|+||+||+|+++.+++.||+|++.+.... ....+.+.+|+++|+.++|||||+++++|++    ...+||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence            47888999999999999999999999999999876443 3445678899999999999999999999975    457899


Q ss_pred             EEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eEEccCCCCcEEEe-cCCCEEEeecCCcccccc
Q 010603          189 LMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMG--VVYRDLKPENVLVR-EDGHIMLSDFDLSLRCFV  265 (506)
Q Consensus       189 V~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~-~~~~vkl~DFGla~~~~~  265 (506)
                      |||||+||+|.+++.+.  ..+++..++.++.||+.||+|||++|  ||||||||+||||+ .++.+||+|||+|+... 
T Consensus        90 vmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~-  166 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-  166 (270)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC-
T ss_pred             EEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc-
Confidence            99999999999999875  57999999999999999999999999  99999999999997 47899999999984210 


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                                                                                                    ..
T Consensus       167 ------------------------------------------------------------------------------~~  168 (270)
T d1t4ha_         167 ------------------------------------------------------------------------------AS  168 (270)
T ss_dssp             ------------------------------------------------------------------------------TT
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          01


Q ss_pred             CccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHH-hCCCCCCCCCCCCCHHHHHHHH
Q 010603          346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV-VGQPLKFPEGSSISFAAKDLIR  424 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i-~~~~~~~p~~~~~s~~~~~li~  424 (506)
                      .....+||+.|||||++.+ .|+.++|||||||+||||++|+.||.+......+.+. ............+++++++||.
T Consensus       169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  247 (270)
T d1t4ha_         169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE  247 (270)
T ss_dssp             SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred             ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHH
Confidence            1234589999999999875 5999999999999999999999999877666555444 4332222223468899999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhcCCCCC
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQHPFFE  451 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~hp~f~  451 (506)
                      +||..||++|||    ++|+|+||||+
T Consensus       248 ~~l~~dp~~R~s----~~ell~Hp~fk  270 (270)
T d1t4ha_         248 GCIRQNKDERYS----IKDLLNHAFFQ  270 (270)
T ss_dssp             HHSCSSGGGSCC----HHHHHTSGGGC
T ss_pred             HHccCCHhHCcC----HHHHhCCcccC
Confidence            999999999997    99999999996


No 19 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=1.3e-59  Score=461.06  Aligned_cols=259  Identities=31%  Similarity=0.444  Sum_probs=226.3

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhc------hhHHHHHHHHHHHHHhcC-CCCccceeEEEEe
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAG------RKKLMRAQTEREILSLLD-HPFLPTLYSHFET  182 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~------~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~  182 (506)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.....      +.....+.+|+.+|+.++ |||||+++++|.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            367999999999999999999999999999999998754322      223346788999999997 9999999999999


Q ss_pred             CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccc
Q 010603          183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLR  262 (506)
Q Consensus       183 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~  262 (506)
                      ++++|||||||+||+|.+++...  ..+++..++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeE
Confidence            99999999999999999999876  5799999999999999999999999999999999999999999999999999854


Q ss_pred             cccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCC
Q 010603          263 CFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEP  342 (506)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (506)
                      ....                                                                            
T Consensus       160 ~~~~----------------------------------------------------------------------------  163 (277)
T d1phka_         160 LDPG----------------------------------------------------------------------------  163 (277)
T ss_dssp             CCTT----------------------------------------------------------------------------
T ss_pred             ccCC----------------------------------------------------------------------------
Confidence            2110                                                                            


Q ss_pred             CCCCccccccCCCCccchhhcC------CCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCC--CCC
Q 010603          343 TSARSMSFVGTHEYLAPEIIRG------DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE--GSS  414 (506)
Q Consensus       343 ~~~~~~~~~GT~~Y~APE~l~~------~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~  414 (506)
                        ......+||+.|+|||++.+      ..|+.++||||+||+||||++|+.||.+.+..+.+..+......++.  ...
T Consensus       164 --~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (277)
T d1phka_         164 --EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD  241 (277)
T ss_dssp             --CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGG
T ss_pred             --CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCccccc
Confidence              01123479999999999963      34788999999999999999999999999888888888876655443  347


Q ss_pred             CCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          415 ISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       415 ~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      +|+++++||.+||+.||.+||+    ++|||+||||+.
T Consensus       242 ~s~~~~~li~~~L~~~p~~R~s----~~eil~h~~~~~  275 (277)
T d1phka_         242 YSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQ  275 (277)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCT
T ss_pred             CCHHHHHHHHHHccCChhHCcC----HHHHHcCHHHHH
Confidence            9999999999999999999997    999999999975


No 20 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.2e-60  Score=471.97  Aligned_cols=256  Identities=25%  Similarity=0.394  Sum_probs=226.6

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++..    .....+.+|+++|+.++|||||+++++|++++.+|||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv   79 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            467999999999999999999999999999999998753    2234567899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecC--CCEEEeecCCccccccCC
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRED--GHIMLSDFDLSLRCFVSP  267 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~--~~vkl~DFGla~~~~~~~  267 (506)
                      ||||.||+|.+++... +..+++..++.|+.||+.||+|||++|||||||||+|||++.+  +.+||+|||+++..... 
T Consensus        80 mE~~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~-  157 (321)
T d1tkia_          80 FEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-  157 (321)
T ss_dssp             ECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred             EecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccC-
Confidence            9999999999998765 2479999999999999999999999999999999999999854  48999999998542110 


Q ss_pred             ccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCc
Q 010603          268 KLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARS  347 (506)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (506)
                                                                                                   ...
T Consensus       158 -----------------------------------------------------------------------------~~~  160 (321)
T d1tkia_         158 -----------------------------------------------------------------------------DNF  160 (321)
T ss_dssp             -----------------------------------------------------------------------------CEE
T ss_pred             -----------------------------------------------------------------------------Ccc
Confidence                                                                                         011


Q ss_pred             cccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHH
Q 010603          348 MSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEG--SSISFAAKDLIRG  425 (506)
Q Consensus       348 ~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~  425 (506)
                      ...+||+.|+|||++.+..|+.++|||||||+||+|++|++||.+.+..+.+.++......++..  ..+++++++||.+
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  240 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHH
Confidence            23479999999999999999999999999999999999999999999988888888777666532  3689999999999


Q ss_pred             HhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          426 LLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       426 ~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      ||..||.+|||    ++|+|+||||+.
T Consensus       241 ~L~~dp~~R~s----~~eil~hp~~~~  263 (321)
T d1tkia_         241 LLVKERKSRMT----ASEALQHPWLKQ  263 (321)
T ss_dssp             TSCSSGGGSCC----HHHHHHSHHHHS
T ss_pred             HccCChhHCcC----HHHHhcCHhhcc
Confidence            99999999997    999999999964


No 21 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-59  Score=467.12  Aligned_cols=257  Identities=28%  Similarity=0.385  Sum_probs=210.9

Q ss_pred             EEeEEeecCceEEEEEEEccCCceEEEEEeccchhhch--hHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEee
Q 010603          115 LLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGR--KKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEF  192 (506)
Q Consensus       115 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  192 (506)
                      .+++||+|+||+||+|+++.+|+.||||++++......  .....+.+|+.+|+.++|||||+++++|.+++++||||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            57899999999999999999999999999976543221  1234678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCccccC
Q 010603          193 CSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQS  272 (506)
Q Consensus       193 ~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  272 (506)
                      |.++++..++..  ...+++..++.+++||+.||+|||++|||||||||+|||++.++.+||+|||+|+.....      
T Consensus        82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~------  153 (299)
T d1ua2a_          82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP------  153 (299)
T ss_dssp             CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC------
T ss_pred             hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCC------
Confidence            988887766543  367999999999999999999999999999999999999999999999999998532110      


Q ss_pred             CCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCcccccc
Q 010603          273 SDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMSFVG  352 (506)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  352 (506)
                                                                                             .......+|
T Consensus       154 -----------------------------------------------------------------------~~~~~~~~g  162 (299)
T d1ua2a_         154 -----------------------------------------------------------------------NRAYTHQVV  162 (299)
T ss_dssp             -----------------------------------------------------------------------CCCCCCSCC
T ss_pred             -----------------------------------------------------------------------cccccceec
Confidence                                                                                   001123479


Q ss_pred             CCCCccchhhcCC-CCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CCC--CC---------------CC
Q 010603          353 THEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QPL--KF---------------PE  411 (506)
Q Consensus       353 T~~Y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~--~~---------------p~  411 (506)
                      |+.|||||++.+. .|+.++|||||||+||||++|.+||.+.+..+++.++..   .+.  .+               +.
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (299)
T d1ua2a_         163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG  242 (299)
T ss_dssp             CCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCC
T ss_pred             ChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCC
Confidence            9999999998755 589999999999999999999999999988887766542   110  00               00


Q ss_pred             ------CCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCC
Q 010603          412 ------GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN  454 (506)
Q Consensus       412 ------~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~  454 (506)
                            ...+++++++||.+||+.||++|||    |+|+|+||||++..
T Consensus       243 ~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s----a~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         243 IPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYFSNRP  287 (299)
T ss_dssp             CCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGGTSSS
T ss_pred             CChHHhcccCCHHHHHHHHHHccCChhhCcC----HHHHhCCHhhCCCC
Confidence                  1246889999999999999999997    99999999998643


No 22 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-58  Score=459.47  Aligned_cols=262  Identities=30%  Similarity=0.452  Sum_probs=216.7

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      +++|++++.||+|+||+||+|+++.+|+.||||++++.... .....++.+|+++|+.++|||||+++++|.+++.+|||
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC-hHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence            46899999999999999999999999999999999765432 23346778899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      ||||. |.+..++.......+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.....   
T Consensus        80 ~e~~~-~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~---  155 (298)
T d1gz8a_          80 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---  155 (298)
T ss_dssp             EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC---
T ss_pred             EeecC-CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCC---
Confidence            99995 45555555555578999999999999999999999999999999999999999999999999998542110   


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                                ......
T Consensus       156 --------------------------------------------------------------------------~~~~~~  161 (298)
T d1gz8a_         156 --------------------------------------------------------------------------VRTYTH  161 (298)
T ss_dssp             --------------------------------------------------------------------------SBCTTC
T ss_pred             --------------------------------------------------------------------------ccccee
Confidence                                                                                      011223


Q ss_pred             cccCCCCccchhhcCCC-CCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CCC---------------CCC
Q 010603          350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QPL---------------KFP  410 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~---------------~~p  410 (506)
                      .+||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..+.+.++..   .+.               .++
T Consensus       162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T d1gz8a_         162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP  241 (298)
T ss_dssp             CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred             ecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccc
Confidence            47999999999988776 48899999999999999999999999888777766542   110               000


Q ss_pred             C---------CCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCC
Q 010603          411 E---------GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN  454 (506)
Q Consensus       411 ~---------~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~  454 (506)
                      .         ...++.++++||.+||+.||.+|||    |+|||+||||++++
T Consensus       242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t----~~ell~H~ff~~~~  290 (298)
T d1gz8a_         242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AKAALAHPFFQDVT  290 (298)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGTTCC
T ss_pred             cccccchhhhccCCCHHHHHHHHHHccCChhHCcC----HHHHhCCHhhccCC
Confidence            0         1256889999999999999999997    99999999998753


No 23 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-58  Score=465.09  Aligned_cols=255  Identities=26%  Similarity=0.406  Sum_probs=212.6

Q ss_pred             cccCCeEEEe-EEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHH-hcCCCCccceeEEEEe---
Q 010603          108 LGLGHFRLLK-KLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILS-LLDHPFLPTLYSHFET---  182 (506)
Q Consensus       108 ~~~~~y~i~~-~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~-~l~hpnIv~l~~~~~~---  182 (506)
                      ..+++|++++ .||+|+||+||+|+++.+|+.||||++++.        ..+.+|++++. .++|||||+++++|++   
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA   79 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeeccc
Confidence            3467899986 599999999999999999999999999653        23567998865 5589999999999976   


Q ss_pred             -CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEec---CCCEEEeecC
Q 010603          183 -DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRE---DGHIMLSDFD  258 (506)
Q Consensus       183 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG  258 (506)
                       ..++|||||||+||+|.+++.......+++..++.|+.||+.||+|||++|||||||||+|||++.   .+.+||+|||
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG  159 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  159 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccc
Confidence             467999999999999999998776678999999999999999999999999999999999999986   5679999999


Q ss_pred             CccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCccc
Q 010603          259 LSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVL  338 (506)
Q Consensus       259 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (506)
                      +|+.....                                                                        
T Consensus       160 ~a~~~~~~------------------------------------------------------------------------  167 (335)
T d2ozaa1         160 FAKETTSH------------------------------------------------------------------------  167 (335)
T ss_dssp             TCEECCCC------------------------------------------------------------------------
T ss_pred             eeeeccCC------------------------------------------------------------------------
Confidence            98542110                                                                        


Q ss_pred             ccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHH----hCCCCCCCCC--
Q 010603          339 IAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV----VGQPLKFPEG--  412 (506)
Q Consensus       339 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i----~~~~~~~p~~--  412 (506)
                            ......+||+.|||||++.+..|+.++|||||||+||+|+||++||.+.+..+....+    ......+|..  
T Consensus       168 ------~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~  241 (335)
T d2ozaa1         168 ------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW  241 (335)
T ss_dssp             ------CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHH
T ss_pred             ------CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCccc
Confidence                  0112347999999999999999999999999999999999999999877655444333    2333444432  


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          413 SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       413 ~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                      ..+++++++||.+||+.||++||+    +.|+|+||||..
T Consensus       242 ~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~  277 (335)
T d2ozaa1         242 SEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQ  277 (335)
T ss_dssp             HHSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhHCcC----HHHHHcCHHhhC
Confidence            358999999999999999999997    999999999964


No 24 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-58  Score=452.63  Aligned_cols=251  Identities=27%  Similarity=0.389  Sum_probs=213.2

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchh---HHHHHHHHHHHHHhcC--CCCccceeEEEEeCCe
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRK---KLMRAQTEREILSLLD--HPFLPTLYSHFETDKF  185 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~---~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~  185 (506)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++++.......   ...++.+|+.+|+.++  |||||+++++|++++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999999999999999999876543221   1233567999999986  8999999999999999


Q ss_pred             EEEEEeecCC-CChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecC-CCEEEeecCCcccc
Q 010603          186 SCLLMEFCSG-GDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRED-GHIMLSDFDLSLRC  263 (506)
Q Consensus       186 ~~lV~E~~~g-g~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFGla~~~  263 (506)
                      +|+||||+.+ ++|.+++...  ..+++..++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+..
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~  161 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL  161 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceec
Confidence            9999999976 6788887765  679999999999999999999999999999999999999954 79999999998532


Q ss_pred             ccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCC
Q 010603          264 FVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPT  343 (506)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (506)
                      ..                                                                              
T Consensus       162 ~~------------------------------------------------------------------------------  163 (273)
T d1xwsa_         162 KD------------------------------------------------------------------------------  163 (273)
T ss_dssp             CS------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            10                                                                              


Q ss_pred             CCCccccccCCCCccchhhcCCCC-CcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 010603          344 SARSMSFVGTHEYLAPEIIRGDGH-GSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDL  422 (506)
Q Consensus       344 ~~~~~~~~GT~~Y~APE~l~~~~~-~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~l  422 (506)
                       ...++.+||+.|||||++.+..| +.++|||||||+||||++|+.||.+..      .+......++.  .+++++++|
T Consensus       164 -~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~~~~~--~~s~~~~~l  234 (273)
T d1xwsa_         164 -TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ--RVSSECQHL  234 (273)
T ss_dssp             -SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCSS--CCCHHHHHH
T ss_pred             -ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhcccCCCC--CCCHHHHHH
Confidence             01223479999999999987765 678999999999999999999997532      23445555554  699999999


Q ss_pred             HHHHhhcCCCCccCCCCChHHhhcCCCCCCCC
Q 010603          423 IRGLLVKDPQKRLGFKRGATEIKQHPFFESVN  454 (506)
Q Consensus       423 i~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~  454 (506)
                      |.+||..||++|||    ++|+|+||||+++.
T Consensus       235 i~~~L~~dp~~R~s----~~eil~hp~~~~~~  262 (273)
T d1xwsa_         235 IRWCLALRPSDRPT----FEEIQNHPWMQDVL  262 (273)
T ss_dssp             HHHHTCSSGGGSCC----HHHHHTSGGGSSCC
T ss_pred             HHHHccCCHhHCcC----HHHHhcCHhhCCCC
Confidence            99999999999997    99999999998753


No 25 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.5e-58  Score=453.46  Aligned_cols=258  Identities=19%  Similarity=0.272  Sum_probs=221.0

Q ss_pred             CCCcccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 010603          105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDK  184 (506)
Q Consensus       105 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~  184 (506)
                      .+++..++|++.+.||+|+||+||+|+++.+|+.||||++++..    ...+++.+|+++|+.++|||||++++++.+++
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   86 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhCCCCCEecCCccEeeCC
Confidence            35566778999999999999999999999999999999997653    33456789999999999999999999999999


Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccc
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF  264 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~  264 (506)
                      .+|||||||++|+|.+++.......+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+...
T Consensus        87 ~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~  166 (287)
T d1opja_          87 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT  166 (287)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred             eeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecC
Confidence            99999999999999999988777889999999999999999999999999999999999999999999999999985421


Q ss_pred             cCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCC
Q 010603          265 VSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTS  344 (506)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (506)
                      ....                                                                            
T Consensus       167 ~~~~----------------------------------------------------------------------------  170 (287)
T d1opja_         167 GDTY----------------------------------------------------------------------------  170 (287)
T ss_dssp             SSSS----------------------------------------------------------------------------
T ss_pred             CCCc----------------------------------------------------------------------------
Confidence            1000                                                                            


Q ss_pred             CCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 010603          345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIR  424 (506)
Q Consensus       345 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~  424 (506)
                      .......||+.|||||++.+..|+.++|||||||+||||++|..||........+.+++......+....+++++++||.
T Consensus       171 ~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~  250 (287)
T d1opja_         171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR  250 (287)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHH
Confidence            00112358999999999999999999999999999999999777665555555555555455555555679999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhc
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      +||+.||++|||    ++|+++
T Consensus       251 ~cl~~dP~~Rps----~~ei~~  268 (287)
T d1opja_         251 ACWQWNPSDRPS----FAEIHQ  268 (287)
T ss_dssp             HHTCSSGGGSCC----HHHHHH
T ss_pred             HHcCCCHhHCcC----HHHHHH
Confidence            999999999998    788865


No 26 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=1.2e-57  Score=447.58  Aligned_cols=260  Identities=23%  Similarity=0.410  Sum_probs=216.7

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCC----eE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDK----FS  186 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~  186 (506)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..........++.+|+++|+.++|||||++++++...+    .+
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            56999999999999999999999999999999998876666666778899999999999999999999998654    48


Q ss_pred             EEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccC
Q 010603          187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVS  266 (506)
Q Consensus       187 ~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~  266 (506)
                      |||||||+||+|..++...  +.+++..++.|+.||+.||+|||++|||||||||+||||+.++.++|+|||++......
T Consensus        87 ~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~  164 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS  164 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred             EEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccc
Confidence            9999999999999988776  67999999999999999999999999999999999999999999999999987532111


Q ss_pred             CccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCC
Q 010603          267 PKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSAR  346 (506)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (506)
                      ..                                                                          ....
T Consensus       165 ~~--------------------------------------------------------------------------~~~~  170 (277)
T d1o6ya_         165 GN--------------------------------------------------------------------------SVTQ  170 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cc--------------------------------------------------------------------------cccc
Confidence            00                                                                          0111


Q ss_pred             ccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCC--CCCCCCHHHHHHHH
Q 010603          347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP--EGSSISFAAKDLIR  424 (506)
Q Consensus       347 ~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~s~~~~~li~  424 (506)
                      ....+||+.|||||++.+..|+.++|||||||+||||+||++||.+.+..+.+.+++......+  ....+++++.+||.
T Consensus       171 ~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~  250 (277)
T d1o6ya_         171 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVL  250 (277)
T ss_dssp             --------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHH
T ss_pred             cccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHH
Confidence            2345899999999999999999999999999999999999999999988888877776544332  23579999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhcCCCC
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQHPFF  450 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~hp~f  450 (506)
                      +||++||.+||+   +|++++ |+|+
T Consensus       251 ~~L~~dp~~R~~---sa~~l~-~~l~  272 (277)
T d1o6ya_         251 KALAKNPENRYQ---TAAEMR-ADLV  272 (277)
T ss_dssp             HHTCSSGGGSCS---SHHHHH-HHHH
T ss_pred             HHccCCHhHCHh---HHHHHH-HHHH
Confidence            999999999995   255554 5554


No 27 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-57  Score=454.89  Aligned_cols=261  Identities=19%  Similarity=0.276  Sum_probs=219.4

Q ss_pred             CCcccCCeEEEeEEeecCceEEEEEEEccCCc-----eEEEEEeccchhhchhHHHHHHHHHHHHHhc-CCCCccceeEE
Q 010603          106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGC-----LFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLYSH  179 (506)
Q Consensus       106 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~  179 (506)
                      +++..++|++++.||+|+||+||+|+++.+++     .||+|++.+...  ......+.+|+.+|+.+ +|||||+++++
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~  109 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGA  109 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC--HHHHHHHHHHHHHHHHhcCCCcEeEEEEE
Confidence            34566789999999999999999999876554     699999876432  23345678899999988 89999999999


Q ss_pred             EEeCCeEEEEEeecCCCChHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEEcc
Q 010603          180 FETDKFSCLLMEFCSGGDLHTLRQRQPG---------------------KHFSEQATRFYASEVLLALEYLHMMGVVYRD  238 (506)
Q Consensus       180 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~---------------------~~~~e~~~~~i~~qil~aL~yLH~~giiHrD  238 (506)
                      +.+.+.+|||||||++|+|.++++....                     ..+++..++.|+.||+.||+|||++||||||
T Consensus       110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRD  189 (325)
T d1rjba_         110 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  189 (325)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9999999999999999999999876432                     3589999999999999999999999999999


Q ss_pred             CCCCcEEEecCCCEEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCcccccc
Q 010603          239 LKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSK  318 (506)
Q Consensus       239 LKp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (506)
                      |||+|||++.++++||+|||+|+.......                                                  
T Consensus       190 lKp~Nill~~~~~~Kl~DFGla~~~~~~~~--------------------------------------------------  219 (325)
T d1rjba_         190 LAARNVLVTHGKVVKICDFGLARDIMSDSN--------------------------------------------------  219 (325)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTT--------------------------------------------------
T ss_pred             CchhccccccCCeEEEeeccccccccCCCc--------------------------------------------------
Confidence            999999999999999999999954221100                                                  


Q ss_pred             ccccccccccCCCCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHH
Q 010603          319 TTKVKSEKTSLTNSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRE  397 (506)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~  397 (506)
                                               ........||+.|||||++.+..|+.++|||||||+||||+| |++||.+.+..+
T Consensus       220 -------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         220 -------------------------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             -------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             -------------------------eeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence                                     001123468999999999999999999999999999999997 899999888777


Q ss_pred             HHHHHhCCCCCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcC
Q 010603          398 TLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       398 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      .+.+++.....++.+..+++++++||.+||+.||++|||    ++||++|
T Consensus       275 ~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt----~~ei~~~  320 (325)
T d1rjba_         275 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF  320 (325)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            777777676666666689999999999999999999998    8898875


No 28 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-57  Score=450.05  Aligned_cols=262  Identities=26%  Similarity=0.389  Sum_probs=213.0

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccC-CceEEEEEeccchhhchhHHHHHHHHHHHHHhc---CCCCccceeEEEEe---
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDM-GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL---DHPFLPTLYSHFET---  182 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~---  182 (506)
                      .++|+++++||+|+||+||+|++..+ ++.||||++++..... .....+.+|+.+|+.|   +|||||+++++|..   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-hHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            35799999999999999999999765 6779999997654322 1222345677776665   89999999999853   


Q ss_pred             --CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCc
Q 010603          183 --DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLS  260 (506)
Q Consensus       183 --~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla  260 (506)
                        ..++|++||||.++.+.... ......+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||++
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~  163 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  163 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             ccCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence              35789999999887765443 344578999999999999999999999999999999999999999999999999997


Q ss_pred             cccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCccccc
Q 010603          261 LRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIA  340 (506)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (506)
                      +.....                                                                          
T Consensus       164 ~~~~~~--------------------------------------------------------------------------  169 (305)
T d1blxa_         164 RIYSFQ--------------------------------------------------------------------------  169 (305)
T ss_dssp             CCCCGG--------------------------------------------------------------------------
T ss_pred             hhhccc--------------------------------------------------------------------------
Confidence            431100                                                                          


Q ss_pred             CCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CCC--CCC-----
Q 010603          341 EPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QPL--KFP-----  410 (506)
Q Consensus       341 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~--~~p-----  410 (506)
                          ......+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+.+.+++.   .+.  .++     
T Consensus       170 ----~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (305)
T d1blxa_         170 ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  245 (305)
T ss_dssp             ----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred             ----ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccc
Confidence                011234799999999999999999999999999999999999999999888877766542   110  000     


Q ss_pred             ---------------CCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCCc
Q 010603          411 ---------------EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW  455 (506)
Q Consensus       411 ---------------~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~  455 (506)
                                     ....+++.+++||.+||+.||++|||    |+|+|+||||+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~s----a~e~L~Hpff~~i~~  301 (305)
T d1blxa_         246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYFQDLER  301 (305)
T ss_dssp             CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTCCC
T ss_pred             hhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHhcChhhcCchh
Confidence                           11357899999999999999999997    999999999998764


No 29 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-57  Score=456.27  Aligned_cols=273  Identities=41%  Similarity=0.797  Sum_probs=227.9

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEE---ccCCceEEEEEeccchhh-chhHHHHHHHHHHHHHhcCC-CCccceeEEEEe
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAEL---RDMGCLFAMKVMDKGMLA-GRKKLMRAQTEREILSLLDH-PFLPTLYSHFET  182 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~---~~~~~~vAiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~  182 (506)
                      +.+++|++++.||+|+||+||+|++   +.+|+.||||++++.... .......+.+|+++|++++| |||+++++++++
T Consensus        21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~  100 (322)
T d1vzoa_          21 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  100 (322)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             cchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc
Confidence            5678899999999999999999997   447899999999875432 22334556789999999976 899999999999


Q ss_pred             CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccc
Q 010603          183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLR  262 (506)
Q Consensus       183 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~  262 (506)
                      ...+|+||||+.+|+|.+++...  +.+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.
T Consensus       101 ~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         101 ETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             CCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhh
Confidence            99999999999999999998876  5789999999999999999999999999999999999999999999999999864


Q ss_pred             cccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCC
Q 010603          263 CFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEP  342 (506)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (506)
                      +....                                                                           
T Consensus       179 ~~~~~---------------------------------------------------------------------------  183 (322)
T d1vzoa_         179 FVADE---------------------------------------------------------------------------  183 (322)
T ss_dssp             CCGGG---------------------------------------------------------------------------
T ss_pred             hcccc---------------------------------------------------------------------------
Confidence            31110                                                                           


Q ss_pred             CCCCccccccCCCCccchhhcCCC--CCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHH----hCCCCCCCCCCCCC
Q 010603          343 TSARSMSFVGTHEYLAPEIIRGDG--HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNV----VGQPLKFPEGSSIS  416 (506)
Q Consensus       343 ~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i----~~~~~~~p~~~~~s  416 (506)
                       ........||+.|+|||++.+..  ++.++|||||||+||||++|+.||.+.+..+....+    ......+|.  .++
T Consensus       184 -~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~--~~s  260 (322)
T d1vzoa_         184 -TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ--EMS  260 (322)
T ss_dssp             -GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCT--TSC
T ss_pred             -cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcc--cCC
Confidence             00122347999999999998654  688999999999999999999999876554433333    233344443  699


Q ss_pred             HHHHHHHHHHhhcCCCCccCCC-CChHHhhcCCCCCCCCcchhcc
Q 010603          417 FAAKDLIRGLLVKDPQKRLGFK-RGATEIKQHPFFESVNWALIRS  460 (506)
Q Consensus       417 ~~~~~li~~~L~~dP~~R~s~~-~~a~ell~hp~f~~~~~~~~~~  460 (506)
                      +++++||.+||++||.+||++. .+|+|+|+||||+.++|..+..
T Consensus       261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~  305 (322)
T d1vzoa_         261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAA  305 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHT
T ss_pred             HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHh
Confidence            9999999999999999999864 3699999999999999986644


No 30 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-57  Score=442.74  Aligned_cols=260  Identities=20%  Similarity=0.299  Sum_probs=216.2

Q ss_pred             CCCcccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 010603          105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDK  184 (506)
Q Consensus       105 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~  184 (506)
                      ++++..++|++++.||+|+||+||+|+++ +++.||||++++..    ...+.+.+|+++|+.++|||||++++++. ++
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~   80 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QE   80 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cC
Confidence            45566788999999999999999999986 47889999997653    23356789999999999999999999875 45


Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccc
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF  264 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~  264 (506)
                      .+|||||||++|+|.+++.......+++..+..|+.||+.||.|||++|||||||||+||||+.++.+||+|||+|+...
T Consensus        81 ~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~  160 (272)
T d1qpca_          81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (272)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEcc
Confidence            67999999999999998766544579999999999999999999999999999999999999999999999999996431


Q ss_pred             cCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCC
Q 010603          265 VSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTS  344 (506)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (506)
                      ....                                                                            
T Consensus       161 ~~~~----------------------------------------------------------------------------  164 (272)
T d1qpca_         161 DNEY----------------------------------------------------------------------------  164 (272)
T ss_dssp             SSCE----------------------------------------------------------------------------
T ss_pred             CCcc----------------------------------------------------------------------------
Confidence            1100                                                                            


Q ss_pred             CCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcC-CCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 010603          345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLG-RTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLI  423 (506)
Q Consensus       345 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li  423 (506)
                      .......||+.|||||++.+..|+.++|||||||+||||+|| .+||...+..+.+..+... ...+.+..+++++.+||
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li  243 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRMVRPDNCPEELYQLM  243 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHHHHHH
T ss_pred             ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CCCCCcccChHHHHHHH
Confidence            001223699999999999999999999999999999999995 5556666666666665543 34444457999999999


Q ss_pred             HHHhhcCCCCccCCCCChHHhhc--CCCCC
Q 010603          424 RGLLVKDPQKRLGFKRGATEIKQ--HPFFE  451 (506)
Q Consensus       424 ~~~L~~dP~~R~s~~~~a~ell~--hp~f~  451 (506)
                      .+||+.||++|||    ++++++  |+||.
T Consensus       244 ~~cl~~~P~~Rpt----~~ei~~~L~~~ft  269 (272)
T d1qpca_         244 RLCWKERPEDRPT----FDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHTCSSGGGSCC----HHHHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcC----HHHHHHHhhhhhh
Confidence            9999999999998    888887  67774


No 31 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.4e-57  Score=443.68  Aligned_cols=258  Identities=23%  Similarity=0.333  Sum_probs=211.8

Q ss_pred             CCCcccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 010603          105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDK  184 (506)
Q Consensus       105 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~  184 (506)
                      ++++..++|++++.||+|+||+||+|+.+   ..||||+++..... ....+.+.+|+++|+.++|||||++++++. .+
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~   76 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYST-AP   76 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCC-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-cc
Confidence            45677788999999999999999999765   35999999765433 345677889999999999999999999865 45


Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccc
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF  264 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~  264 (506)
                      .+|||||||+||+|.+++... ...+++..+..|+.||+.||+|||++|||||||||+||||+.++++||+|||+|+...
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             EEEEEEecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            689999999999999998764 3579999999999999999999999999999999999999999999999999985321


Q ss_pred             cCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCC
Q 010603          265 VSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTS  344 (506)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (506)
                      ...                                                                           ..
T Consensus       156 ~~~---------------------------------------------------------------------------~~  160 (276)
T d1uwha_         156 RWS---------------------------------------------------------------------------GS  160 (276)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccC---------------------------------------------------------------------------Cc
Confidence            100                                                                           00


Q ss_pred             CCccccccCCCCccchhhcCC---CCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCC----CCCCCCH
Q 010603          345 ARSMSFVGTHEYLAPEIIRGD---GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFP----EGSSISF  417 (506)
Q Consensus       345 ~~~~~~~GT~~Y~APE~l~~~---~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~s~  417 (506)
                      ......+||+.|||||++.+.   .|+.++|||||||+||||+||+.||.+.+....+..++......|    ....+++
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  240 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK  240 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCH
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchH
Confidence            112345799999999999753   589999999999999999999999998877766655543332222    2346899


Q ss_pred             HHHHHHHHHhhcCCCCccCCCCChHHhhcC
Q 010603          418 AAKDLIRGLLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       418 ~~~~li~~~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      ++.+||.+||..||.+|||    ++|+++|
T Consensus       241 ~l~~li~~cl~~dp~~RPt----~~~il~~  266 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPL----FPQILAS  266 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence            9999999999999999998    8888875


No 32 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=1.4e-56  Score=441.74  Aligned_cols=258  Identities=25%  Similarity=0.395  Sum_probs=214.8

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      +++|+++++||+|+||+||+|+++ +|+.||||++++.... .....++.+|+.+|+.++|||||+++++|..++..|++
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcC-hHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEE
Confidence            468999999999999999999986 6899999999775432 33456788899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      |||+.++.|..+....  +.+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|......   
T Consensus        79 ~e~~~~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~---  153 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---  153 (286)
T ss_dssp             EECCSEEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             EEeehhhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC---
Confidence            9999887777765544  78999999999999999999999999999999999999999999999999998542110   


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                                ......
T Consensus       154 --------------------------------------------------------------------------~~~~~~  159 (286)
T d1ob3a_         154 --------------------------------------------------------------------------VRKYTH  159 (286)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------ccccce
Confidence                                                                                      001123


Q ss_pred             cccCCCCccchhhcCC-CCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CCC--------C-------C-
Q 010603          350 FVGTHEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QPL--------K-------F-  409 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~--------~-------~-  409 (506)
                      .+||+.|+|||++.+. .++.++|||||||+||||++|++||.+.+..+.+.++..   .+.        .       + 
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T d1ob3a_         160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT  239 (286)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccc
Confidence            3699999999999865 469999999999999999999999998887777665532   110        0       0 


Q ss_pred             --------CCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          410 --------PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       410 --------p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                              .....++++++|||++||+.||++|||    |+|+|+||||+.
T Consensus       240 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s----~~ell~Hp~f~~  286 (286)
T d1ob3a_         240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKE  286 (286)
T ss_dssp             CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC
T ss_pred             cccCcchhhhcccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCc
Confidence                    011357899999999999999999997    999999999973


No 33 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.3e-56  Score=442.87  Aligned_cols=263  Identities=22%  Similarity=0.322  Sum_probs=211.2

Q ss_pred             CCCcccCCeEEEeEEeecCceEEEEEEEccCCc---eEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 010603          105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGC---LFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFE  181 (506)
Q Consensus       105 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~  181 (506)
                      ..++..++|++.+.||+|+||+||+|+++.+++   .||||.+.....  ....+.+.+|+++|+.++|||||++++++.
T Consensus        20 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~   97 (299)
T d1jpaa_          20 AKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNVIHLEGVVT   97 (299)
T ss_dssp             SCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             chhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC--HHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            345677889999999999999999999987665   588998875432  344567889999999999999999999999


Q ss_pred             eCCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcc
Q 010603          182 TDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       182 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                      .++.+|||||||++|+|.+++... ...+++..+..|+.||+.||+|||++|||||||||+||||+.++++||+|||+|+
T Consensus        98 ~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  176 (299)
T d1jpaa_          98 KSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR  176 (299)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             eCCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccce
Confidence            999999999999999999988764 3579999999999999999999999999999999999999999999999999996


Q ss_pred             ccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccC
Q 010603          262 RCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAE  341 (506)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (506)
                      .+......                                                                        
T Consensus       177 ~~~~~~~~------------------------------------------------------------------------  184 (299)
T d1jpaa_         177 FLEDDTSD------------------------------------------------------------------------  184 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EccCCCCc------------------------------------------------------------------------
Confidence            43211000                                                                        


Q ss_pred             CCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHH
Q 010603          342 PTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAK  420 (506)
Q Consensus       342 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~  420 (506)
                      ..........||+.|||||++.+..|+.++|||||||+||||+| |++||.+.+..+.+..+... ...+....++.++.
T Consensus       185 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~  263 (299)
T d1jpaa_         185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD-YRLPPPMDCPSALH  263 (299)
T ss_dssp             -----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCCCCCTTCCHHHH
T ss_pred             ceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCccchHHHH
Confidence            00001122368999999999999999999999999999999998 89999998888777776643 34445557999999


Q ss_pred             HHHHHHhhcCCCCccCCCCChHHhhcC
Q 010603          421 DLIRGLLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       421 ~li~~~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      +||.+||+.||.+||+    +.|++++
T Consensus       264 ~li~~cl~~~P~~RPs----~~ei~~~  286 (299)
T d1jpaa_         264 QLMLDCWQKDRNHRPK----FGQIVNT  286 (299)
T ss_dssp             HHHHHHTCSSTTTSCC----HHHHHHH
T ss_pred             HHHHHHcCCCHhHCcC----HHHHHHH
Confidence            9999999999999998    6777653


No 34 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-56  Score=451.20  Aligned_cols=257  Identities=30%  Similarity=0.438  Sum_probs=211.3

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDK-----  184 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----  184 (506)
                      .++|+++++||+|+||+||+|+++.+|+.||||++++... .....+.+.+|+++|+.++|||||+++++|...+     
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            4679999999999999999999999999999999986533 3455677889999999999999999999998665     


Q ss_pred             -eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcccc
Q 010603          185 -FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC  263 (506)
Q Consensus       185 -~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~  263 (506)
                       ++||||||| +++|..+++.   ..+++..++.+++||+.||+|||++|||||||||+|||++.++.+||+|||+|+..
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~  171 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA  171 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceecc
Confidence             579999999 7788887765   47999999999999999999999999999999999999999999999999998542


Q ss_pred             ccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCC
Q 010603          264 FVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPT  343 (506)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (506)
                      ..                                                                              
T Consensus       172 ~~------------------------------------------------------------------------------  173 (346)
T d1cm8a_         172 DS------------------------------------------------------------------------------  173 (346)
T ss_dssp             CS------------------------------------------------------------------------------
T ss_pred             CC------------------------------------------------------------------------------
Confidence            10                                                                              


Q ss_pred             CCCccccccCCCCccchhhcCC-CCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CC-------------
Q 010603          344 SARSMSFVGTHEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QP-------------  406 (506)
Q Consensus       344 ~~~~~~~~GT~~Y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~-------------  406 (506)
                        ..+..+||+.|||||++.+. .++.++|||||||+||||++|++||.+.+..+.+..+..   ..             
T Consensus       174 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (346)
T d1cm8a_         174 --EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA  251 (346)
T ss_dssp             --SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred             --ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhh
Confidence              01234799999999999875 468999999999999999999999998877665544321   10             


Q ss_pred             -------CCCC------CCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCCc
Q 010603          407 -------LKFP------EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW  455 (506)
Q Consensus       407 -------~~~p------~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~  455 (506)
                             ....      ....+++++++||.+||..||.+|||    |+|||+||||+.+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         252 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEALAHPYFESLHD  309 (346)
T ss_dssp             HHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTC-
T ss_pred             hhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcC----HHHHhcChhhCcCCC
Confidence                   0000      11357899999999999999999997    999999999998764


No 35 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.2e-56  Score=432.52  Aligned_cols=251  Identities=22%  Similarity=0.337  Sum_probs=206.2

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      .++|++++.||+|+||+||+|+++. ++.||||++++...    ..+.+.+|+++|+.++|||||++++++..++.+|||
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV   78 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETT-TEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECC-CCEEEEEEECCCcC----cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEE
Confidence            3579999999999999999999874 67899999986532    234678899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      ||||++|+|.+++... ...+++..+..|+.||+.||+|||+++||||||||+||||+.++.+||+|||+|+......  
T Consensus        79 ~E~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~--  155 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--  155 (263)
T ss_dssp             EECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred             EEecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCC--
Confidence            9999999999988764 3578999999999999999999999999999999999999999999999999985421100  


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                                ......
T Consensus       156 --------------------------------------------------------------------------~~~~~~  161 (263)
T d1sm2a_         156 --------------------------------------------------------------------------YTSSTG  161 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------ceeecc
Confidence                                                                                      001122


Q ss_pred             cccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010603          350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLV  428 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~  428 (506)
                      ..||+.|||||++.+..|+.++|||||||+||||+| |.+||...+..+.+..+... ...+.+..+++++.+||.+||+
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~  240 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWK  240 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc-CCCCCccccCHHHHHHHHHHcc
Confidence            469999999999999999999999999999999999 57777777766666666543 2333334789999999999999


Q ss_pred             cCCCCccCCCCChHHhhcC
Q 010603          429 KDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       429 ~dP~~R~s~~~~a~ell~h  447 (506)
                      .||++||+    ++|+++|
T Consensus       241 ~~p~~Rps----~~~il~~  255 (263)
T d1sm2a_         241 ERPEDRPA----FSRLLRQ  255 (263)
T ss_dssp             SSGGGSCC----HHHHHHH
T ss_pred             CCHhHCcC----HHHHHHH
Confidence            99999998    8898875


No 36 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-56  Score=437.07  Aligned_cols=254  Identities=22%  Similarity=0.307  Sum_probs=208.0

Q ss_pred             eEEeecCceEEEEEEEcc--CCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeecC
Q 010603          117 KKLGCGDIGSVYLAELRD--MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLLMEFCS  194 (506)
Q Consensus       117 ~~LG~G~fG~Vy~a~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  194 (506)
                      ++||+|+||+||+|.++.  +++.||||+++.... .....+++.+|+++|+.++|||||+++++++++ ..|||||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCC
Confidence            579999999999998753  467899999976543 234456789999999999999999999999754 5789999999


Q ss_pred             CCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCccccCCC
Q 010603          195 GGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSD  274 (506)
Q Consensus       195 gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~  274 (506)
                      +|+|.+++...  ..+++..+..|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+.......    
T Consensus        91 ~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~----  164 (277)
T d1xbba_          91 LGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY----  164 (277)
T ss_dssp             TEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE----
T ss_pred             CCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccc----
Confidence            99999998875  679999999999999999999999999999999999999999999999999996432111000    


Q ss_pred             CcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccccccCC
Q 010603          275 DPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMSFVGTH  354 (506)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~  354 (506)
                                                                                            .......||+
T Consensus       165 ----------------------------------------------------------------------~~~~~~~gt~  174 (277)
T d1xbba_         165 ----------------------------------------------------------------------KAQTHGKWPV  174 (277)
T ss_dssp             ----------------------------------------------------------------------EC----CCCG
T ss_pred             ----------------------------------------------------------------------ccccccCCCc
Confidence                                                                                  0012236999


Q ss_pred             CCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhhcCCCC
Q 010603          355 EYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQK  433 (506)
Q Consensus       355 ~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~  433 (506)
                      .|||||++.+..|+.++|||||||+||||++ |++||.+.+..+....+..+. ..+.+..+++++.+||.+||+.||++
T Consensus       175 ~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dp~~  253 (277)
T d1xbba_         175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVEN  253 (277)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTT
T ss_pred             eecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCC-CCCCCcccCHHHHHHHHHHcCCCHhH
Confidence            9999999999999999999999999999997 899999988877766665432 33333479999999999999999999


Q ss_pred             ccCCCCChHHh---hcCCCCCCC
Q 010603          434 RLGFKRGATEI---KQHPFFESV  453 (506)
Q Consensus       434 R~s~~~~a~el---l~hp~f~~~  453 (506)
                      ||+    ++++   |+|+|++.+
T Consensus       254 RPs----~~~i~~~L~~~~~~~~  272 (277)
T d1xbba_         254 RPG----FAAVELRLRNYYYDVV  272 (277)
T ss_dssp             SCC----HHHHHHHHHHHHHHHH
T ss_pred             CcC----HHHHHHHhhCHHhhcC
Confidence            998    5565   677776543


No 37 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-56  Score=442.58  Aligned_cols=263  Identities=27%  Similarity=0.336  Sum_probs=210.0

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe-------
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET-------  182 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-------  182 (506)
                      +++|+++++||+|+||+||+|+++.+|+.||||++.+.... .....++.+|+++|+.++||||+++++++..       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~   87 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   87 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence            57899999999999999999999999999999999775433 3345667889999999999999999999855       


Q ss_pred             -CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcc
Q 010603          183 -DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       183 -~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                       .+++|+|||||.++.+..+...  ...+++..++.+++||+.||+|||++|||||||||+||||+.++.+||+|||+++
T Consensus        88 ~~~~~~iv~e~~~~~~~~~~~~~--~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          88 CKGSIYLVFDFCEHDLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             ---CEEEEEECCCEEHHHHHTCT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCceEEEEEeccCCCccchhhhc--ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceee
Confidence             4568999999977766644333  3689999999999999999999999999999999999999999999999999985


Q ss_pred             ccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccC
Q 010603          262 RCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAE  341 (506)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (506)
                      ........                                                                        
T Consensus       166 ~~~~~~~~------------------------------------------------------------------------  173 (318)
T d3blha1         166 AFSLAKNS------------------------------------------------------------------------  173 (318)
T ss_dssp             ECCC----------------------------------------------------------------------------
T ss_pred             eccccccc------------------------------------------------------------------------
Confidence            43211000                                                                        


Q ss_pred             CCCCCccccccCCCCccchhhcCC-CCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCCCCCC--C------
Q 010603          342 PTSARSMSFVGTHEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPLKFPE--G------  412 (506)
Q Consensus       342 ~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~------  412 (506)
                       ........+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+..+.+..+......++.  .      
T Consensus       174 -~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  252 (318)
T d3blha1         174 -QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNY  252 (318)
T ss_dssp             --CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC
T ss_pred             -ccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchh
Confidence             00011234799999999999876 6899999999999999999999999988877666554321111000  0      


Q ss_pred             ----------------------CCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCC
Q 010603          413 ----------------------SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFES  452 (506)
Q Consensus       413 ----------------------~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~  452 (506)
                                            ...+++++|||.+||+.||++|||    |+|+|+||||+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~s----a~elL~Hpff~~  310 (318)
T d3blha1         253 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDALNHDFFWS  310 (318)
T ss_dssp             -------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGSS
T ss_pred             hhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHHcChhhcc
Confidence                                  013678899999999999999997    999999999974


No 38 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-55  Score=446.96  Aligned_cols=254  Identities=28%  Similarity=0.463  Sum_probs=208.3

Q ss_pred             CeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe------CCe
Q 010603          112 HFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET------DKF  185 (506)
Q Consensus       112 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~  185 (506)
                      +|+.+++||+|+||+||+|+++.+|+.||||++.+...       ...+|+++|+.++|||||+++++|..      ..+
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~   93 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY   93 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence            49999999999999999999999999999999976531       12369999999999999999999854      336


Q ss_pred             EEEEEeecCCCChHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCC-CEEEeecCCcccc
Q 010603          186 SCLLMEFCSGGDLHTLRQR-QPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDG-HIMLSDFDLSLRC  263 (506)
Q Consensus       186 ~~lV~E~~~gg~L~~~l~~-~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFGla~~~  263 (506)
                      +|||||||+++.+..+... .....+++..++.|++||+.||+|||++|||||||||+||||+.++ .+||+|||+|..+
T Consensus        94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            8999999976654444322 3346799999999999999999999999999999999999999875 8999999998542


Q ss_pred             ccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCC
Q 010603          264 FVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPT  343 (506)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (506)
                      ...                                                                             
T Consensus       174 ~~~-----------------------------------------------------------------------------  176 (350)
T d1q5ka_         174 VRG-----------------------------------------------------------------------------  176 (350)
T ss_dssp             CTT-----------------------------------------------------------------------------
T ss_pred             cCC-----------------------------------------------------------------------------
Confidence            110                                                                             


Q ss_pred             CCCccccccCCCCccchhhcCC-CCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CC-------------
Q 010603          344 SARSMSFVGTHEYLAPEIIRGD-GHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QP-------------  406 (506)
Q Consensus       344 ~~~~~~~~GT~~Y~APE~l~~~-~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~-------------  406 (506)
                       ....+.+||+.|+|||++.+. .|+.++|||||||++|||++|++||...+..+.+..+..   .+             
T Consensus       177 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  255 (350)
T d1q5ka_         177 -EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT  255 (350)
T ss_dssp             -SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred             -cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence             011234799999999998764 689999999999999999999999998887777665531   10             


Q ss_pred             -CCCC----------CCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCC
Q 010603          407 -LKFP----------EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVN  454 (506)
Q Consensus       407 -~~~p----------~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~  454 (506)
                       ..++          ....+++++.+||.+||..||++|||    |.|+|+||||+.+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSFFDELR  310 (350)
T ss_dssp             CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGGGGG
T ss_pred             hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhcccc
Confidence             1111          11357899999999999999999997    99999999998653


No 39 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-55  Score=433.75  Aligned_cols=263  Identities=22%  Similarity=0.300  Sum_probs=215.7

Q ss_pred             ccCCeEEEeE-EeecCceEEEEEEEccC--CceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 010603          109 GLGHFRLLKK-LGCGDIGSVYLAELRDM--GCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKF  185 (506)
Q Consensus       109 ~~~~y~i~~~-LG~G~fG~Vy~a~~~~~--~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~  185 (506)
                      ..++|.+.+. ||+|+||+||+|.++.+  +..||||++++..  .....+++.+|+++|+.++|||||++++++.+ +.
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~   82 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA   82 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-Ce
Confidence            3456888885 99999999999987643  4579999997653  23456678899999999999999999999975 45


Q ss_pred             EEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcccccc
Q 010603          186 SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFV  265 (506)
Q Consensus       186 ~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~  265 (506)
                      +|||||||++|+|.+++... ...+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+..
T Consensus        83 ~~lvmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_          83 LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             EEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEEEEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccc
Confidence            89999999999999987654 35799999999999999999999999999999999999999999999999999965321


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                      ....                                                                          ..
T Consensus       162 ~~~~--------------------------------------------------------------------------~~  167 (285)
T d1u59a_         162 DDSY--------------------------------------------------------------------------YT  167 (285)
T ss_dssp             CSCE--------------------------------------------------------------------------EC
T ss_pred             cccc--------------------------------------------------------------------------cc
Confidence            1100                                                                          00


Q ss_pred             CccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 010603          346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIR  424 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~  424 (506)
                      ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+.+..+..+. ..+.+..+++++.+||.
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~  246 (285)
T d1u59a_         168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMS  246 (285)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC-CCCCCTTCCHHHHHHHH
T ss_pred             cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHH
Confidence            0112368999999999999999999999999999999998 999999988877777776442 22333479999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhcCCCCC
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQHPFFE  451 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~hp~f~  451 (506)
                      +||..||++||++. .+.+.|+|+|+.
T Consensus       247 ~cl~~~p~~RPs~~-~i~~~L~~~~~~  272 (285)
T d1u59a_         247 DCWIYKWEDRPDFL-TVEQRMRACYYS  272 (285)
T ss_dssp             HTTCSSGGGSCCHH-HHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHH-HHHHHHHHHHHH
Confidence            99999999999853 244557888874


No 40 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=3.2e-55  Score=440.49  Aligned_cols=254  Identities=25%  Similarity=0.406  Sum_probs=209.0

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcC-CCCccceeEEEEeC--CeE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD-HPFLPTLYSHFETD--KFS  186 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~~  186 (506)
                      .++|+++++||+|+||+||+|+++.+|+.||||++++..      ..++.+|+++|+.+. ||||++++++|...  ..+
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence            367999999999999999999999999999999997532      345778999999995 99999999999854  579


Q ss_pred             EEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCC-CEEEeecCCcccccc
Q 010603          187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDG-HIMLSDFDLSLRCFV  265 (506)
Q Consensus       187 ~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFGla~~~~~  265 (506)
                      |+|||||.+++|..+.     +.+++..++.+++||+.||+|||++|||||||||+||||+.++ .+||+|||+|+....
T Consensus       108 ~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             EEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccC
Confidence            9999999999997653     4699999999999999999999999999999999999999765 589999999854211


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                      .                                                                              .
T Consensus       183 ~------------------------------------------------------------------------------~  184 (328)
T d3bqca1         183 G------------------------------------------------------------------------------Q  184 (328)
T ss_dssp             T------------------------------------------------------------------------------C
T ss_pred             C------------------------------------------------------------------------------C
Confidence            0                                                                              0


Q ss_pred             CccccccCCCCccchhhcCCC-CCcchhHHHHHHHHHHHhcCCCCCCCCCcH-HHHHHH---hCC----------C----
Q 010603          346 RSMSFVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNR-ETLFNV---VGQ----------P----  406 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~~~-~~~~~i---~~~----------~----  406 (506)
                      .....+||+.|+|||++.+.. |+.++|||||||++|||++|+.||...... +....+   ++.          .    
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence            112347999999999988764 799999999999999999999999765432 222111   110          0    


Q ss_pred             ------------------CCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCCcc
Q 010603          407 ------------------LKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWA  456 (506)
Q Consensus       407 ------------------~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~~  456 (506)
                                        ...+....++++++|||++||+.||.+|||    |+|||+||||+++.|+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AREAMEHPYFYTVVKD  328 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTSCCC
T ss_pred             cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCCCCCC
Confidence                              000111347899999999999999999997    9999999999999884


No 41 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-55  Score=433.37  Aligned_cols=262  Identities=24%  Similarity=0.305  Sum_probs=215.1

Q ss_pred             CCCCcccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 010603          104 KDGDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETD  183 (506)
Q Consensus       104 ~~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~  183 (506)
                      ..+++..++|++++.||+|+||+||+|+++.+ +.||||+++....    ..+.+.+|+.+|+.++|||||++++++.+ 
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-   83 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-   83 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             cceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhcccCCEeEEEEEEec-
Confidence            44567778999999999999999999999865 5799999976532    23567889999999999999999999854 


Q ss_pred             CeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcccc
Q 010603          184 KFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRC  263 (506)
Q Consensus       184 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~  263 (506)
                      +.+|+|||||++|+|..++.......+++..++.|+.||+.||+|||++||+||||||+||||+.++++||+|||+|+..
T Consensus        84 ~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~  163 (285)
T d1fmka3          84 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI  163 (285)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred             CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhc
Confidence            56789999999999999887654567999999999999999999999999999999999999999999999999998542


Q ss_pred             ccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCC
Q 010603          264 FVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPT  343 (506)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (506)
                      ....                                                                            
T Consensus       164 ~~~~----------------------------------------------------------------------------  167 (285)
T d1fmka3         164 EDNE----------------------------------------------------------------------------  167 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCC----------------------------------------------------------------------------
Confidence            1100                                                                            


Q ss_pred             CCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCC-CCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 010603          344 SARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGR-TPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDL  422 (506)
Q Consensus       344 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~-~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~l  422 (506)
                      ........||+.|+|||++.+..++.++|||||||+||||++|. +||.+....+.+..+.. ....+....+++++++|
T Consensus       168 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l~~l  246 (285)
T d1fmka3         168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPPECPESLHDL  246 (285)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTSCHHHHHH
T ss_pred             ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCcccCHHHHHH
Confidence            00112246999999999999999999999999999999999965 45555555555555553 33444555799999999


Q ss_pred             HHHHhhcCCCCccCCCCChHHhhc--CCCCCC
Q 010603          423 IRGLLVKDPQKRLGFKRGATEIKQ--HPFFES  452 (506)
Q Consensus       423 i~~~L~~dP~~R~s~~~~a~ell~--hp~f~~  452 (506)
                      |.+||+.||++||+    +++|++  |+||..
T Consensus       247 i~~cl~~dP~~Rps----~~~i~~~L~~~~~~  274 (285)
T d1fmka3         247 MCQCWRKEPEERPT----FEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHTCSSGGGSCC----HHHHHHHHHTTTSC
T ss_pred             HHHHcccCHhHCcC----HHHHHHHHhhhhcC
Confidence            99999999999997    889877  788864


No 42 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-55  Score=426.77  Aligned_cols=251  Identities=22%  Similarity=0.312  Sum_probs=216.9

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      .++|+++++||+|+||+||+|+++ +++.||||++++...    ....+.+|+.+++.++|||||++++++.+++.+++|
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Confidence            357999999999999999999986 678999999987543    234678899999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      |||+.+|+|..++... ...+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+....  
T Consensus        78 ~Ey~~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~--  154 (258)
T d1k2pa_          78 TEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--  154 (258)
T ss_dssp             EECCTTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS--
T ss_pred             EEccCCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCC--
Confidence            9999999999986654 3578999999999999999999999999999999999999999999999999985321100  


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                                ......
T Consensus       155 --------------------------------------------------------------------------~~~~~~  160 (258)
T d1k2pa_         155 --------------------------------------------------------------------------YTSSVG  160 (258)
T ss_dssp             --------------------------------------------------------------------------CCCCCC
T ss_pred             --------------------------------------------------------------------------ceeecc
Confidence                                                                                      001112


Q ss_pred             cccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010603          350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLV  428 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~  428 (506)
                      ..||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+...++... ...+.+..+++++.+||.+||+
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~  239 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWH  239 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTC
T ss_pred             cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-CCCCCcccccHHHHHHHHHHcc
Confidence            369999999999999999999999999999999998 89999999988877777654 3444445789999999999999


Q ss_pred             cCCCCccCCCCChHHhhcC
Q 010603          429 KDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       429 ~dP~~R~s~~~~a~ell~h  447 (506)
                      .||++|||    ++++++|
T Consensus       240 ~dP~~RPt----~~eil~~  254 (258)
T d1k2pa_         240 EKADERPT----FKILLSN  254 (258)
T ss_dssp             SSGGGSCC----HHHHHHH
T ss_pred             CCHhHCcC----HHHHHHH
Confidence            99999998    8898886


No 43 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-54  Score=427.51  Aligned_cols=260  Identities=25%  Similarity=0.396  Sum_probs=217.2

Q ss_pred             cCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 010603          110 LGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       110 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  189 (506)
                      +++|+++++||+|+||+||+|+++.+|+.||||++++... ......++.+|+.+|+.++|||||++++++.+....++|
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEE
Confidence            4689999999999999999999999999999999976543 345667889999999999999999999999999999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      ||++.+++|..++...  +.+++..++.++.|++.||+|||++|||||||||+|||++.++.+||+|||+|+......  
T Consensus        80 ~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~--  155 (292)
T d1unla_          80 FEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--  155 (292)
T ss_dssp             EECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC--
T ss_pred             eeeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC--
Confidence            9999999998887665  789999999999999999999999999999999999999999999999999985421100  


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                                 .....
T Consensus       156 ---------------------------------------------------------------------------~~~~~  160 (292)
T d1unla_         156 ---------------------------------------------------------------------------RCYSA  160 (292)
T ss_dssp             ---------------------------------------------------------------------------SCCCS
T ss_pred             ---------------------------------------------------------------------------cccee
Confidence                                                                                       00112


Q ss_pred             cccCCCCccchhhcCCC-CCcchhHHHHHHHHHHHhcCCCCCC-CCCcHHHHHHHh---CCCC-----------------
Q 010603          350 FVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFK-GNGNRETLFNVV---GQPL-----------------  407 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~-~~~~~~~~~~i~---~~~~-----------------  407 (506)
                      ..+++.|+|||++.+.. ++.++|||||||++|||++|+.||. +.+..+.+..+.   ..+.                 
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T d1unla_         161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             eccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccc
Confidence            35788999999998765 6999999999999999999999864 444444444332   1110                 


Q ss_pred             -------CCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCC
Q 010603          408 -------KFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV  453 (506)
Q Consensus       408 -------~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~  453 (506)
                             .......+++.+++||.+||+.||.+|||    |+|+|+||||+++
T Consensus       241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~s----a~e~L~Hp~f~~~  289 (292)
T d1unla_         241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFSDF  289 (292)
T ss_dssp             CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGSSC
T ss_pred             cccccchhhhccccCCHHHHHHHHHHccCChhHCcC----HHHHhcChhhcCC
Confidence                   00011357889999999999999999997    9999999999863


No 44 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-54  Score=439.86  Aligned_cols=259  Identities=26%  Similarity=0.381  Sum_probs=208.7

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----e
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDK-----F  185 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~  185 (506)
                      .+|++++.||+|+||+||+|+++.+|+.||||++++..  .....+++.+|+++|+.|+|||||++++++....     +
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            46999999999999999999999999999999998643  2345567889999999999999999999997654     3


Q ss_pred             EEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcccccc
Q 010603          186 SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFV  265 (506)
Q Consensus       186 ~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~  265 (506)
                      +||+ ||+.||+|.+++...   .+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|.....
T Consensus        86 ~~l~-~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          86 VYLV-THLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEEE-EECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEE-EeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            4555 556699999999764   699999999999999999999999999999999999999999999999999854211


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                      ...                                                                          ...
T Consensus       162 ~~~--------------------------------------------------------------------------~~~  167 (345)
T d1pmea_         162 DHD--------------------------------------------------------------------------HTG  167 (345)
T ss_dssp             GGC--------------------------------------------------------------------------BCC
T ss_pred             CCc--------------------------------------------------------------------------cce
Confidence            100                                                                          001


Q ss_pred             CccccccCCCCccchhhcC-CCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhC---CC---------------
Q 010603          346 RSMSFVGTHEYLAPEIIRG-DGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVG---QP---------------  406 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~-~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~---------------  406 (506)
                      .....+||+.|+|||++.. ..|+.++||||+||++|||++|+.||.+.+..+.......   .+               
T Consensus       168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T d1pmea_         168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN  247 (345)
T ss_dssp             TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred             eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhc
Confidence            1223479999999999854 5679999999999999999999999988776555443321   00               


Q ss_pred             --CCCCC---------CCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCC
Q 010603          407 --LKFPE---------GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV  453 (506)
Q Consensus       407 --~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~  453 (506)
                        ...+.         ...+++++++||.+||+.||.+||+    |+|+|+||||+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----a~e~L~hpf~~~~  301 (345)
T d1pmea_         248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQALAHPYLEQY  301 (345)
T ss_dssp             HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTT
T ss_pred             ccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhccC
Confidence              00110         1257889999999999999999997    9999999999854


No 45 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-54  Score=424.95  Aligned_cols=258  Identities=22%  Similarity=0.260  Sum_probs=207.4

Q ss_pred             CcccCCeEEEeEEeecCceEEEEEEEccCC----ceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 010603          107 DLGLGHFRLLKKLGCGDIGSVYLAELRDMG----CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET  182 (506)
Q Consensus       107 ~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~  182 (506)
                      ++....|++.++||+|+||+||+|.++.++    ..||||+++....  ......+.+|+++|+.++|||||++++++.+
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~   80 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFSHHNIIRLEGVISK   80 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC--hHHHHHHHHHHHHHHhcCCCCEeeeeEEEec
Confidence            455567999999999999999999988654    4699999976432  2344567899999999999999999999999


Q ss_pred             CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccc
Q 010603          183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLR  262 (506)
Q Consensus       183 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~  262 (506)
                      .+.+++|||||.+|+|.+++... ...+++..+..++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             CCceEEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhc
Confidence            99999999999999999887654 36799999999999999999999999999999999999999999999999999964


Q ss_pred             cccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCC
Q 010603          263 CFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEP  342 (506)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (506)
                      +......                                                                         
T Consensus       160 ~~~~~~~-------------------------------------------------------------------------  166 (283)
T d1mqba_         160 LEDDPEA-------------------------------------------------------------------------  166 (283)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccCCCcc-------------------------------------------------------------------------
Confidence            3211000                                                                         


Q ss_pred             CCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCC-CCCCcHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 010603          343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPF-KGNGNRETLFNVVGQPLKFPEGSSISFAAKD  421 (506)
Q Consensus       343 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf-~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~  421 (506)
                       ........||+.|||||++.+..|+.++|||||||+||||++|..|| ...+..+.+..+. .....+....++..+.+
T Consensus       167 -~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~  244 (283)
T d1mqba_         167 -TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDCPSAIYQ  244 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTCBHHHHH
T ss_pred             -ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh-ccCCCCCchhhHHHHHH
Confidence             00112336899999999999999999999999999999999965554 4445444444444 44455555679999999


Q ss_pred             HHHHHhhcCCCCccCCCCChHHhhc
Q 010603          422 LIRGLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       422 li~~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      ||.+||..||++||+    +.||++
T Consensus       245 li~~cl~~~p~~RPt----~~eil~  265 (283)
T d1mqba_         245 LMMQCWQQERARRPK----FADIVS  265 (283)
T ss_dssp             HHHHHTCSSTTTSCC----HHHHHH
T ss_pred             HHHHHCcCCHhHCcC----HHHHHH
Confidence            999999999999998    778766


No 46 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-54  Score=423.34  Aligned_cols=257  Identities=24%  Similarity=0.330  Sum_probs=209.6

Q ss_pred             CCcccCCeEEEeEEeecCceEEEEEEEccCC---ceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 010603          106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET  182 (506)
Q Consensus       106 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~---~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~  182 (506)
                      +++..++|++++.||+|+||+||+|++..++   ..||||+++...  .......+.+|+++|+.++|||||++++++. 
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-   78 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   78 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            4566678999999999999999999987543   568899886543  2344567889999999999999999999995 


Q ss_pred             CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccc
Q 010603          183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLR  262 (506)
Q Consensus       183 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~  262 (506)
                      ++.+|||||||.+|+|.+++... ...+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.
T Consensus        79 ~~~~~iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~  157 (273)
T d1mp8a_          79 ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  157 (273)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             cCeEEEEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhhee
Confidence            56789999999999999987654 35799999999999999999999999999999999999999999999999999854


Q ss_pred             cccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCC
Q 010603          263 CFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEP  342 (506)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (506)
                      .....                                                                           
T Consensus       158 ~~~~~---------------------------------------------------------------------------  162 (273)
T d1mp8a_         158 MEDST---------------------------------------------------------------------------  162 (273)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccCCc---------------------------------------------------------------------------
Confidence            21100                                                                           


Q ss_pred             CCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 010603          343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKD  421 (506)
Q Consensus       343 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~  421 (506)
                       ........||+.|+|||++.+..|+.++|||||||+||||++ |.+||.+.+..+.+..+.... ..+.+..+++++.+
T Consensus       163 -~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~  240 (273)
T d1mp8a_         163 -YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYS  240 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHH
T ss_pred             -ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHH
Confidence             001123468999999999999999999999999999999998 899999998888888777543 23444579999999


Q ss_pred             HHHHHhhcCCCCccCCCCChHHhhcC
Q 010603          422 LIRGLLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       422 li~~~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      ||.+||..||++|||    +.||++|
T Consensus       241 li~~cl~~dp~~Rps----~~ei~~~  262 (273)
T d1mp8a_         241 LMTKCWAYDPSRRPR----FTELKAQ  262 (273)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHcCCCHhHCcC----HHHHHHH
Confidence            999999999999998    8888875


No 47 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-54  Score=424.83  Aligned_cols=258  Identities=22%  Similarity=0.310  Sum_probs=209.9

Q ss_pred             ccCCeEEEeEEeecCceEEEEEEEccC-C--ceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 010603          109 GLGHFRLLKKLGCGDIGSVYLAELRDM-G--CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKF  185 (506)
Q Consensus       109 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~--~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~  185 (506)
                      ..++|++++.||+|+||+||+|++..+ +  ..||||++++.........+.+.+|+.+|+.++|||||++++++.+ +.
T Consensus         6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~   84 (273)
T d1u46a_           6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP   84 (273)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc
Confidence            346799999999999999999987633 2  3689999988766666677889999999999999999999999975 46


Q ss_pred             EEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcccccc
Q 010603          186 SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFV  265 (506)
Q Consensus       186 ~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~  265 (506)
                      +++|||||++|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....
T Consensus        85 ~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             hheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            789999999999998776542 5699999999999999999999999999999999999999999999999999864321


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                      ....                                                                          ..
T Consensus       164 ~~~~--------------------------------------------------------------------------~~  169 (273)
T d1u46a_         164 NDDH--------------------------------------------------------------------------YV  169 (273)
T ss_dssp             -CCE--------------------------------------------------------------------------EE
T ss_pred             CCCc--------------------------------------------------------------------------ce
Confidence            1100                                                                          00


Q ss_pred             CccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 010603          346 RSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIR  424 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~  424 (506)
                      ......||..|+|||++.+..|+.++|||||||++|||+| |++||.+.+..+.+..+......++....++.++++||.
T Consensus       170 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~  249 (273)
T d1u46a_         170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMV  249 (273)
T ss_dssp             C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHH
T ss_pred             ecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHH
Confidence            1123368889999999999999999999999999999998 899999999999888888777777766789999999999


Q ss_pred             HHhhcCCCCccCCCCChHHhhc
Q 010603          425 GLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       425 ~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      +||..||++|||    +.+|++
T Consensus       250 ~cl~~dp~~RPt----~~ei~~  267 (273)
T d1u46a_         250 QCWAHKPEDRPT----FVALRD  267 (273)
T ss_dssp             HHTCSSGGGSCC----HHHHHH
T ss_pred             HHcCCChhHCcC----HHHHHH
Confidence            999999999998    777753


No 48 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-54  Score=429.15  Aligned_cols=260  Identities=20%  Similarity=0.303  Sum_probs=205.2

Q ss_pred             CcccCCeEEEeEEeecCceEEEEEEEcc-----CCceEEEEEeccchhhchhHHHHHHHHHHHHHhc-CCCCccceeEEE
Q 010603          107 DLGLGHFRLLKKLGCGDIGSVYLAELRD-----MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLYSHF  180 (506)
Q Consensus       107 ~~~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~  180 (506)
                      ++..++|+++++||+|+||+||+|++..     +++.||||+++....  ....+.+.+|..++..+ +|+|||.+++++
T Consensus         9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--cHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            4556789999999999999999999764     357899999976432  23345566777777665 789999999988


Q ss_pred             EeC-CeEEEEEeecCCCChHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEE
Q 010603          181 ETD-KFSCLLMEFCSGGDLHTLRQRQP--------------GKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVL  245 (506)
Q Consensus       181 ~~~-~~~~lV~E~~~gg~L~~~l~~~~--------------~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NIL  245 (506)
                      ..+ ..+|+|||||++|+|.+++....              ...+++..++.|+.||+.||+|||++|||||||||+|||
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NIL  166 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  166 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcccee
Confidence            654 57899999999999999987642              235899999999999999999999999999999999999


Q ss_pred             EecCCCEEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccc
Q 010603          246 VREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSE  325 (506)
Q Consensus       246 l~~~~~vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (506)
                      |+.++++||+|||+|+.......                                                         
T Consensus       167 l~~~~~~Kl~DFGla~~~~~~~~---------------------------------------------------------  189 (299)
T d1ywna1         167 LSEKNVVKICDFGLARDIYKDPD---------------------------------------------------------  189 (299)
T ss_dssp             ECGGGCEEECC------CCSCTT---------------------------------------------------------
T ss_pred             ECCCCcEEEccCcchhhcccccc---------------------------------------------------------
Confidence            99999999999999964211100                                                         


Q ss_pred             cccCCCCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcC-CCCCCCCCcHHHHHHHhC
Q 010603          326 KTSLTNSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLG-RTPFKGNGNRETLFNVVG  404 (506)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG-~~Pf~~~~~~~~~~~i~~  404 (506)
                                        .......+||+.|||||++.+..|+.++|||||||++|||++| .+||.+....+.+..++.
T Consensus       190 ------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~  251 (299)
T d1ywna1         190 ------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  251 (299)
T ss_dssp             ------------------SCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH
T ss_pred             ------------------ccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence                              0112234799999999999999999999999999999999986 578888776666666554


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcC
Q 010603          405 QPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       405 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      ....++....+++++++||.+||+.||++|||    ++|+++|
T Consensus       252 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~eil~~  290 (299)
T d1ywna1         252 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  290 (299)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             cCCCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            44444444579999999999999999999997    8999886


No 49 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-54  Score=438.42  Aligned_cols=255  Identities=27%  Similarity=0.394  Sum_probs=210.7

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----Ce
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETD-----KF  185 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~  185 (506)
                      ++|+++++||+|+||+||+|+++.+|+.||||++.+... .....+++.+|+++|+.++|||||+++++|...     ..
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            579999999999999999999999999999999987543 234456788999999999999999999999643     23


Q ss_pred             EEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCcccccc
Q 010603          186 SCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFV  265 (506)
Q Consensus       186 ~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~  265 (506)
                      .++||||+.||+|.+++..   +.+++..++.+++||+.||+|||++|||||||||+|||++.+|.+|++|||+|.... 
T Consensus        97 ~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~-  172 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-  172 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT-
T ss_pred             eEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC-
Confidence            4566777789999999865   479999999999999999999999999999999999999999999999999984210 


Q ss_pred             CCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCC
Q 010603          266 SPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSA  345 (506)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (506)
                                                                                                     .
T Consensus       173 -------------------------------------------------------------------------------~  173 (348)
T d2gfsa1         173 -------------------------------------------------------------------------------D  173 (348)
T ss_dssp             -------------------------------------------------------------------------------G
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             CccccccCCCCccchhhcCCC-CCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCCCC-----------------
Q 010603          346 RSMSFVGTHEYLAPEIIRGDG-HGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQPL-----------------  407 (506)
Q Consensus       346 ~~~~~~GT~~Y~APE~l~~~~-~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------  407 (506)
                      ...+..||+.|+|||++.+.. ++.++|||||||++|+|++|++||.+.+.......+.....                 
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN  253 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred             ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence            012347999999999987765 68999999999999999999999998887766655442111                 


Q ss_pred             ------CCCC------CCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCC
Q 010603          408 ------KFPE------GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESV  453 (506)
Q Consensus       408 ------~~p~------~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~  453 (506)
                            ..+.      ...++++++|||.+||+.||.+|||    |+|||+||||+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~elL~Hp~f~~~  307 (348)
T d2gfsa1         254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHAYFAQY  307 (348)
T ss_dssp             HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTT
T ss_pred             hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcC----HHHHhcCHhhCCC
Confidence                  1111      1257899999999999999999997    9999999999864


No 50 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-54  Score=441.26  Aligned_cols=259  Identities=26%  Similarity=0.371  Sum_probs=206.5

Q ss_pred             ccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe------
Q 010603          109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET------  182 (506)
Q Consensus       109 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------  182 (506)
                      .+++|+++++||+|+||+||+|+++.+|+.||||++.+... ......++.+|+.+|+.++|||||+++++|..      
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccccc
Confidence            34789999999999999999999999999999999987643 34556678899999999999999999999963      


Q ss_pred             CCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccc
Q 010603          183 DKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLR  262 (506)
Q Consensus       183 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~  262 (506)
                      ..++|+|||||.++.| ..+.    ..+++..++.+++||+.||+|||++||+||||||+|||++.++.+|++|||+++.
T Consensus        94 ~~~~~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~  168 (355)
T d2b1pa1          94 FQDVYLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  168 (355)
T ss_dssp             CCEEEEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             CceeEEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhc
Confidence            4689999999965544 4443    4689999999999999999999999999999999999999999999999998743


Q ss_pred             cccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCC
Q 010603          263 CFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEP  342 (506)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (506)
                      ...                                                                             
T Consensus       169 ~~~-----------------------------------------------------------------------------  171 (355)
T d2b1pa1         169 AGT-----------------------------------------------------------------------------  171 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            110                                                                             


Q ss_pred             CCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHHHhCC-----------------
Q 010603          343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFNVVGQ-----------------  405 (506)
Q Consensus       343 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-----------------  405 (506)
                       .......+||+.|+|||++.+..|+.++||||+||++|||++|++||.+.+......+++..                 
T Consensus       172 -~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         172 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             -ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence             01122347999999999999999999999999999999999999999988766655444310                 


Q ss_pred             -----CCCCC--------------C----CCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcCCCCCCCCc
Q 010603          406 -----PLKFP--------------E----GSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNW  455 (506)
Q Consensus       406 -----~~~~p--------------~----~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~hp~f~~~~~  455 (506)
                           .....              .    ....++++++||++||..||++|||    |+|||+||||+...+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t----a~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS----VDDALQHPYINVWYD  319 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTGGGCC
T ss_pred             HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcC----HHHHhcCcccCCCCC
Confidence                 00000              0    0013567899999999999999997    999999999986433


No 51 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-54  Score=420.36  Aligned_cols=249  Identities=23%  Similarity=0.334  Sum_probs=209.3

Q ss_pred             CCcccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEE-eCC
Q 010603          106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFE-TDK  184 (506)
Q Consensus       106 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~  184 (506)
                      +++.+++|++++.||+|+||.||+|+++  |..||||++++.     ...+.+.+|+++|+.++|||||++++++. ..+
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~   74 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   74 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC
Confidence            5788899999999999999999999986  789999999764     33456789999999999999999999885 456


Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccc
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCF  264 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~  264 (506)
                      .+||||||+++|+|.+++.......+++..++.++.||+.||.|||+++||||||||+|||++.+|++||+|||+++...
T Consensus        75 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~  154 (262)
T d1byga_          75 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  154 (262)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             cEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecC
Confidence            78999999999999999876544568999999999999999999999999999999999999999999999999985311


Q ss_pred             cCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCC
Q 010603          265 VSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTS  344 (506)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (506)
                      .                                                                               
T Consensus       155 ~-------------------------------------------------------------------------------  155 (262)
T d1byga_         155 S-------------------------------------------------------------------------------  155 (262)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 010603          345 ARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLI  423 (506)
Q Consensus       345 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li  423 (506)
                       ......||+.|+|||++.+..|+.++|||||||++|||+| |++||...+..+.+..+..+ ...+....+++++++||
T Consensus       156 -~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li  233 (262)
T d1byga_         156 -TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVM  233 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-CCCCCCTTCCHHHHHHH
T ss_pred             -CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCCccCCHHHHHHH
Confidence             0112258899999999999999999999999999999998 79999888877777776543 33334447899999999


Q ss_pred             HHHhhcCCCCccCCCCChHHhhc
Q 010603          424 RGLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       424 ~~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      .+||..||.+|||    +.++++
T Consensus       234 ~~cl~~dP~~Rps----~~~l~~  252 (262)
T d1byga_         234 KNCWHLDAAMRPS----FLQLRE  252 (262)
T ss_dssp             HHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHcccCHhHCcC----HHHHHH
Confidence            9999999999998    778876


No 52 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-53  Score=427.50  Aligned_cols=253  Identities=21%  Similarity=0.255  Sum_probs=206.6

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCc----eEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGC----LFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFETDKFS  186 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  186 (506)
                      .+|+++++||+|+||+||+|+++.+|+    .||+|.++...  .....+++.+|+++|+.++|||||++++++.++ ..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~   85 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   85 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Ce
Confidence            469999999999999999999988876    47777776432  234456788999999999999999999999865 56


Q ss_pred             EEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccC
Q 010603          187 CLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVS  266 (506)
Q Consensus       187 ~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~  266 (506)
                      +++|||+.+|+|.+++... ...+++..++.|+.||+.||+|||++|||||||||+||||+.++++||+|||+|+.....
T Consensus        86 ~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          86 QLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             eEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            7888999999999887764 467999999999999999999999999999999999999999999999999999643211


Q ss_pred             CccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCC
Q 010603          267 PKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSAR  346 (506)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (506)
                      ..                                                                           ...
T Consensus       165 ~~---------------------------------------------------------------------------~~~  169 (317)
T d1xkka_         165 EK---------------------------------------------------------------------------EYH  169 (317)
T ss_dssp             CC------------------------------------------------------------------------------
T ss_pred             cc---------------------------------------------------------------------------ccc
Confidence            00                                                                           001


Q ss_pred             ccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 010603          347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRG  425 (506)
Q Consensus       347 ~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~  425 (506)
                      .....||+.|||||++.+..|+.++|||||||+||||+| |.+||.+.+..+....+..+ ...+.+..+++++.+||.+
T Consensus       170 ~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~-~~~~~p~~~~~~~~~li~~  248 (317)
T d1xkka_         170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLPQPPICTIDVYMIMVK  248 (317)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT-CCCCCCTTBCHHHHHHHHH
T ss_pred             ccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHHHHHH
Confidence            122369999999999999999999999999999999998 89999988777665555433 3334445799999999999


Q ss_pred             HhhcCCCCccCCCCChHHhhcC
Q 010603          426 LLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       426 ~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      ||..||.+||+    +.|+++|
T Consensus       249 cl~~dP~~RPs----~~eil~~  266 (317)
T d1xkka_         249 CWMIDADSRPK----FRELIIE  266 (317)
T ss_dssp             HTCSSGGGSCC----HHHHHHH
T ss_pred             hCCCChhhCcC----HHHHHHH
Confidence            99999999998    8899887


No 53 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5.2e-53  Score=419.35  Aligned_cols=259  Identities=21%  Similarity=0.297  Sum_probs=217.2

Q ss_pred             CCcccCCeEEEeEEeecCceEEEEEEEc-----cCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEE
Q 010603          106 GDLGLGHFRLLKKLGCGDIGSVYLAELR-----DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHF  180 (506)
Q Consensus       106 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~  180 (506)
                      .++..++|++++.||+|+||+||+|+++     .+++.||||++++...  .....++.+|+++|+.++||||+++++++
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC--hHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            3445567999999999999999999976     3567899999976432  34456788999999999999999999999


Q ss_pred             EeCCeEEEEEeecCCCChHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEEcc
Q 010603          181 ETDKFSCLLMEFCSGGDLHTLRQRQP----------------------GKHFSEQATRFYASEVLLALEYLHMMGVVYRD  238 (506)
Q Consensus       181 ~~~~~~~lV~E~~~gg~L~~~l~~~~----------------------~~~~~e~~~~~i~~qil~aL~yLH~~giiHrD  238 (506)
                      ...+..++||||+.+|+|.+++....                      ...+++..+..|+.||+.||+|||++||||||
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            99999999999999999999987532                      23589999999999999999999999999999


Q ss_pred             CCCCcEEEecCCCEEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCcccccc
Q 010603          239 LKPENVLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSK  318 (506)
Q Consensus       239 LKp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (506)
                      |||+||||+.++++||+|||+|+.......                                                  
T Consensus       166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~--------------------------------------------------  195 (301)
T d1lufa_         166 LATRNCLVGENMVVKIADFGLSRNIYSADY--------------------------------------------------  195 (301)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGC--------------------------------------------------
T ss_pred             EcccceEECCCCcEEEccchhheeccCCcc--------------------------------------------------
Confidence            999999999999999999999864321100                                                  


Q ss_pred             ccccccccccCCCCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCC-CCCCCCCcHH
Q 010603          319 TTKVKSEKTSLTNSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGR-TPFKGNGNRE  397 (506)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~-~Pf~~~~~~~  397 (506)
                                               ....+...||+.|||||++.+..|+.++|||||||+||||++|. +||.+.+..+
T Consensus       196 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         196 -------------------------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             -------------------------BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             -------------------------ccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH
Confidence                                     00112347999999999999999999999999999999999985 6898888888


Q ss_pred             HHHHHhCCCCCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhc
Q 010603          398 TLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       398 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      .+..+..+. ..+....+++++.+||.+||+.||.+|||    +.||++
T Consensus       251 ~~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~RPt----~~ev~~  294 (301)
T d1lufa_         251 VIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPS----FCSIHR  294 (301)
T ss_dssp             HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            887777554 23334579999999999999999999998    777754


No 54 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-53  Score=420.95  Aligned_cols=255  Identities=22%  Similarity=0.304  Sum_probs=211.9

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEEccCCce--EEEEEeccchhhchhHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCL--FAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLYSHFETDK  184 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~--vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~  184 (506)
                      +..++|++.++||+|+||+||+|+++.+|..  ||||.++...  .....+.+.+|+++|+.+ +|||||++++++.+.+
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   84 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   84 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC
Confidence            4557899999999999999999999988875  6677765432  233455688999999998 7999999999999999


Q ss_pred             eEEEEEeecCCCChHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCC
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQ--------------PGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDG  250 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~--------------~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~  250 (506)
                      .+|||||||++|+|.++++..              ....+++..+..++.||+.||.|||++|||||||||+|||++.++
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC
Confidence            999999999999999998754              236799999999999999999999999999999999999999999


Q ss_pred             CEEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCC
Q 010603          251 HIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLT  330 (506)
Q Consensus       251 ~vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (506)
                      .+||+|||+|+.....                                                                
T Consensus       165 ~~kl~DfG~a~~~~~~----------------------------------------------------------------  180 (309)
T d1fvra_         165 VAKIADFGLSRGQEVY----------------------------------------------------------------  180 (309)
T ss_dssp             CEEECCTTCEESSCEE----------------------------------------------------------------
T ss_pred             ceEEcccccccccccc----------------------------------------------------------------
Confidence            9999999998532100                                                                


Q ss_pred             CCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCC-CCCCCCCcHHHHHHHhCCCCCC
Q 010603          331 NSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGR-TPFKGNGNRETLFNVVGQPLKF  409 (506)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~-~Pf~~~~~~~~~~~i~~~~~~~  409 (506)
                                    .......||+.|+|||.+.+..|+.++|||||||+||||++|. +||.+.+..+.+..+..+ ..+
T Consensus       181 --------------~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~-~~~  245 (309)
T d1fvra_         181 --------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRL  245 (309)
T ss_dssp             --------------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-CCC
T ss_pred             --------------ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc-CCC
Confidence                          0011236899999999999999999999999999999999965 678888777776666543 334


Q ss_pred             CCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhcC
Q 010603          410 PEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       410 p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~h  447 (506)
                      +.+..+++++++||.+||+.||++||+    +.||++|
T Consensus       246 ~~~~~~~~~~~~li~~cl~~dP~~RPs----~~eil~~  279 (309)
T d1fvra_         246 EKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS  279 (309)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            444579999999999999999999998    8899986


No 55 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-52  Score=416.79  Aligned_cols=259  Identities=23%  Similarity=0.309  Sum_probs=212.5

Q ss_pred             CCcccCCeEEEeEEeecCceEEEEEEEccCC-------ceEEEEEeccchhhchhHHHHHHHHHHHHHhc-CCCCcccee
Q 010603          106 GDLGLGHFRLLKKLGCGDIGSVYLAELRDMG-------CLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLY  177 (506)
Q Consensus       106 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~-------~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~  177 (506)
                      +++..++|++++.||+|+||.||+|++..++       ..||||+++++..  ......+.+|..++.++ +|||||+++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~e~~~l~~~~~HpnIv~~~   85 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLL   85 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC--hHHHHHHHHHHHHHHHhcCCCeEEecc
Confidence            4567788999999999999999999987554       4799999987542  33456677888888777 899999999


Q ss_pred             EEEEeCCeEEEEEeecCCCChHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCc
Q 010603          178 SHFETDKFSCLLMEFCSGGDLHTLRQRQP--------------GKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN  243 (506)
Q Consensus       178 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~N  243 (506)
                      +++.+++.+|+|||||.+|+|.+++....              ...+++..++.++.||+.||+|||++|||||||||+|
T Consensus        86 ~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N  165 (299)
T d1fgka_          86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  165 (299)
T ss_dssp             EEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             cccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc
Confidence            99999999999999999999999987642              2468999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccc
Q 010603          244 VLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVK  323 (506)
Q Consensus       244 ILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (506)
                      ||++.++.+||+|||+++......                                                        
T Consensus       166 iLl~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------------  189 (299)
T d1fgka_         166 VLVTEDNVMKIADFGLARDIHHID--------------------------------------------------------  189 (299)
T ss_dssp             EEECTTCCEEECSTTCCCCGGGCC--------------------------------------------------------
T ss_pred             eeecCCCCeEeccchhhccccccc--------------------------------------------------------
Confidence            999999999999999985432110                                                        


Q ss_pred             cccccCCCCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHH
Q 010603          324 SEKTSLTNSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV  402 (506)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i  402 (506)
                                         ........+||+.|+|||++.++.|+.++|||||||+||||++ |.+||.+.+..+.+..+
T Consensus       190 -------------------~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i  250 (299)
T d1fgka_         190 -------------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL  250 (299)
T ss_dssp             -------------------TTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             -------------------cccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence                               0011223479999999999999999999999999999999998 79999888777666555


Q ss_pred             hCCCCCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhc
Q 010603          403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       403 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      .. ...++....+++++++||.+||+.||.+|||    +.||++
T Consensus       251 ~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps----~~eil~  289 (299)
T d1fgka_         251 KE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVE  289 (299)
T ss_dssp             HT-TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             Hc-CCCCCCCccchHHHHHHHHHHccCCHhHCcC----HHHHHH
Confidence            43 3444445579999999999999999999998    888876


No 56 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-52  Score=417.89  Aligned_cols=260  Identities=20%  Similarity=0.295  Sum_probs=218.8

Q ss_pred             CCcccCCeEEEeEEeecCceEEEEEEEc-----cCCceEEEEEeccchhhchhHHHHHHHHHHHHHhc-CCCCccceeEE
Q 010603          106 GDLGLGHFRLLKKLGCGDIGSVYLAELR-----DMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLL-DHPFLPTLYSH  179 (506)
Q Consensus       106 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~  179 (506)
                      +++..++|++.++||+|+||.||+|+++     .+++.||||++++...  ......+.+|+.+++.+ +|||||+++++
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~E~~~~~~l~~HpnIv~~~g~   95 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGA   95 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC--HHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3456678999999999999999999874     4567899999986542  33455678899999998 79999999999


Q ss_pred             EEeCCeEEEEEeecCCCChHHHHhhCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCc
Q 010603          180 FETDKFSCLLMEFCSGGDLHTLRQRQP----------------GKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPEN  243 (506)
Q Consensus       180 ~~~~~~~~lV~E~~~gg~L~~~l~~~~----------------~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~N  243 (506)
                      +.+.+.+|||||||++|+|.+++....                ...+++..++.|+.||+.||+|||++|||||||||+|
T Consensus        96 ~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~N  175 (311)
T d1t46a_          96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (311)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccc
Confidence            999999999999999999999987642                2368999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccc
Q 010603          244 VLVREDGHIMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVK  323 (506)
Q Consensus       244 ILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (506)
                      ||++.++.+||+|||+++.+.....                                                       
T Consensus       176 Il~~~~~~~ki~DfG~~~~~~~~~~-------------------------------------------------------  200 (311)
T d1t46a_         176 ILLTHGRITKICDFGLARDIKNDSN-------------------------------------------------------  200 (311)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTT-------------------------------------------------------
T ss_pred             ccccccCcccccccchheeccCCCc-------------------------------------------------------
Confidence            9999999999999999854211100                                                       


Q ss_pred             cccccCCCCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhc-CCCCCCCCCcHHHHHHH
Q 010603          324 SEKTSLTNSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLL-GRTPFKGNGNRETLFNV  402 (506)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~ellt-G~~Pf~~~~~~~~~~~i  402 (506)
                                          .......+||+.|||||++.+..++.++|||||||+||||+| |.+||.+....+.+.++
T Consensus       201 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~  260 (311)
T d1t46a_         201 --------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM  260 (311)
T ss_dssp             --------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred             --------------------ceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                                001123479999999999999999999999999999999998 67778777777777777


Q ss_pred             hCCCCCCCCCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhc
Q 010603          403 VGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       403 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      +......+....+++++.+||.+||+.||.+||+    +++|++
T Consensus       261 i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs----~~~il~  300 (311)
T d1t46a_         261 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIVQ  300 (311)
T ss_dssp             HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HhcCCCCCCcccccHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            6555555555578999999999999999999998    788775


No 57 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-52  Score=414.28  Aligned_cols=266  Identities=19%  Similarity=0.271  Sum_probs=222.2

Q ss_pred             CCCcccCCeEEEeEEeecCceEEEEEEEcc-----CCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEE
Q 010603          105 DGDLGLGHFRLLKKLGCGDIGSVYLAELRD-----MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSH  179 (506)
Q Consensus       105 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~  179 (506)
                      ++++..++|++++.||+|+||+||+|.++.     ++..||||++++..  .......+.+|+++|+.++|||||+++++
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~   91 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV   91 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            356777889999999999999999999863     35789999998643  23445567899999999999999999999


Q ss_pred             EEeCCeEEEEEeecCCCChHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCC
Q 010603          180 FETDKFSCLLMEFCSGGDLHTLRQRQ--------PGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGH  251 (506)
Q Consensus       180 ~~~~~~~~lV~E~~~gg~L~~~l~~~--------~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~  251 (506)
                      +..++..++|||||.+|+|.+++...        ....+++..+..++.||+.||.|||+++||||||||+||||+.+++
T Consensus        92 ~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~  171 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  171 (308)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             EecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCce
Confidence            99999999999999999999987642        1235789999999999999999999999999999999999999999


Q ss_pred             EEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCC
Q 010603          252 IMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTN  331 (506)
Q Consensus       252 vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (506)
                      +||+|||+|+.......                                                               
T Consensus       172 ~Kl~DFGla~~~~~~~~---------------------------------------------------------------  188 (308)
T d1p4oa_         172 VKIGDFGMTRDIYETDY---------------------------------------------------------------  188 (308)
T ss_dssp             EEECCTTCCCGGGGGGC---------------------------------------------------------------
T ss_pred             EEEeecccceeccCCcc---------------------------------------------------------------
Confidence            99999999854211100                                                               


Q ss_pred             CCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcC-CCCCCCCCcHHHHHHHhCCCCCCC
Q 010603          332 SDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLG-RTPFKGNGNRETLFNVVGQPLKFP  410 (506)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~p  410 (506)
                                  .......+||+.|||||.+.+..|+.++|||||||+||||+|| ++||.+.+..+.+..+.... ..+
T Consensus       189 ------------~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~-~~~  255 (308)
T d1p4oa_         189 ------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-LLD  255 (308)
T ss_dssp             ------------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-CCC
T ss_pred             ------------eeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC-CCC
Confidence                        0011233699999999999999999999999999999999998 58898888888887776543 333


Q ss_pred             CCCCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhc------CCCCCC
Q 010603          411 EGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ------HPFFES  452 (506)
Q Consensus       411 ~~~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~------hp~f~~  452 (506)
                      ....+++.+.+||.+||+.||.+||+    +.+|++      +|+|+.
T Consensus       256 ~p~~~~~~l~~li~~cl~~~P~~RPs----~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         256 KPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHGGGSCTTHHH
T ss_pred             CcccchHHHHHHHHHHcCCChhHCcC----HHHHHHHHHHhcCCCCcC
Confidence            44579999999999999999999998    677776      666654


No 58 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-50  Score=402.25  Aligned_cols=253  Identities=16%  Similarity=0.226  Sum_probs=202.3

Q ss_pred             EEEeEEeecCceEEEEEEEccCC---ceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCccceeEEEEe-CCeEEEE
Q 010603          114 RLLKKLGCGDIGSVYLAELRDMG---CLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFLPTLYSHFET-DKFSCLL  189 (506)
Q Consensus       114 ~i~~~LG~G~fG~Vy~a~~~~~~---~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lV  189 (506)
                      .+.++||+|+||+||+|++..++   ..||||++++..  ......++.+|+++|++++|||||++++++.. ++..++|
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv  107 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  107 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEE
Confidence            34678999999999999987643   358999997532  34556778999999999999999999999765 5689999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeecCCccccccCCcc
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCFVSPKL  269 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFGla~~~~~~~~~  269 (506)
                      ||||++|+|.+++... ...+++..+..++.||+.||.|||+.||+||||||+||||++++.+||+|||+++........
T Consensus       108 ~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             EEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            9999999999987754 356788889999999999999999999999999999999999999999999998643211100


Q ss_pred             ccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCCccc
Q 010603          270 VQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSARSMS  349 (506)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (506)
                                                                                               .......
T Consensus       187 -------------------------------------------------------------------------~~~~~~~  193 (311)
T d1r0pa_         187 -------------------------------------------------------------------------SVHNKTG  193 (311)
T ss_dssp             -------------------------------------------------------------------------CTTCTTC
T ss_pred             -------------------------------------------------------------------------cceeccc
Confidence                                                                                     0001122


Q ss_pred             cccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcH-HHHHHHhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010603          350 FVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR-ETLFNVVGQPLKFPEGSSISFAAKDLIRGLLV  428 (506)
Q Consensus       350 ~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~  428 (506)
                      ..||+.|+|||++.+..++.++|||||||+||||+||..||...... +....+..+ ...+....+++.+.+||.+||.
T Consensus       194 ~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g-~~~~~p~~~~~~l~~li~~cl~  272 (311)
T d1r0pa_         194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPDPLYEVMLKCWH  272 (311)
T ss_dssp             SSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT-CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCcccCcHHHHHHHHHHcC
Confidence            36999999999999999999999999999999999987777654333 333444433 2333334789999999999999


Q ss_pred             cCCCCccCCCCChHHhhcC
Q 010603          429 KDPQKRLGFKRGATEIKQH  447 (506)
Q Consensus       429 ~dP~~R~s~~~~a~ell~h  447 (506)
                      .||++||+    +.|+++|
T Consensus       273 ~dP~~RPs----~~ei~~~  287 (311)
T d1r0pa_         273 PKAEMRPS----FSELVSR  287 (311)
T ss_dssp             SSGGGSCC----HHHHHHH
T ss_pred             CCHhHCcC----HHHHHHH
Confidence            99999998    8888887


No 59 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=3.3e-51  Score=405.80  Aligned_cols=262  Identities=18%  Similarity=0.258  Sum_probs=200.8

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCC-ccceeEEEEeCCeEEEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPF-LPTLYSHFETDKFSCLL  189 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lV  189 (506)
                      ++|++++.||+|+||+||+|+++.+|+.||||++......     .++..|+++++.++|+| |+.+.+++...+..++|
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~iv   81 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   81 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEE
Confidence            3699999999999999999999999999999998764321     23567999999997766 55556667888899999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEec---CCCEEEeecCCccccccC
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRE---DGHIMLSDFDLSLRCFVS  266 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFGla~~~~~~  266 (506)
                      |||| +++|...+... .+.+++..+..++.||+.||+|||++|||||||||+|||++.   +..+||+|||+|+.....
T Consensus        82 me~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          82 MELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             EECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             EEEc-CCchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence            9999 66776665543 367999999999999999999999999999999999999864   457999999999653211


Q ss_pred             CccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCCCCCC
Q 010603          267 PKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEPTSAR  346 (506)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (506)
                      .....                                                                      .....
T Consensus       160 ~~~~~----------------------------------------------------------------------~~~~~  169 (299)
T d1ckia_         160 RTHQH----------------------------------------------------------------------IPYRE  169 (299)
T ss_dssp             TTCCB----------------------------------------------------------------------CCCCB
T ss_pred             ccccc----------------------------------------------------------------------eeccc
Confidence            10000                                                                      00111


Q ss_pred             ccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcHHHHHH---HhCCCCCCC---CCCCCCHHHH
Q 010603          347 SMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNRETLFN---VVGQPLKFP---EGSSISFAAK  420 (506)
Q Consensus       347 ~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~~~~~~---i~~~~~~~p---~~~~~s~~~~  420 (506)
                      ....+||+.|||||++.+..|+.++|||||||++|||++|+.||...........   ........+   ....+++++.
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  249 (299)
T d1ckia_         170 NKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFA  249 (299)
T ss_dssp             CCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHH
T ss_pred             cCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHH
Confidence            2345899999999999999999999999999999999999999987654433222   111111111   1236899999


Q ss_pred             HHHHHHhhcCCCCccCCCCChHHhhcCCCC
Q 010603          421 DLIRGLLVKDPQKRLGFKRGATEIKQHPFF  450 (506)
Q Consensus       421 ~li~~~L~~dP~~R~s~~~~a~ell~hp~f  450 (506)
                      +||.+||..||++||++. .+.++|+|+|.
T Consensus       250 ~li~~cl~~~p~~RP~~~-~i~~~l~~~~~  278 (299)
T d1ckia_         250 TYLNFCRSLRFDDKPDYS-YLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHSCTTCCCCHH-HHHHHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHH-HHHHHHHHHHH
Confidence            999999999999999842 24566777765


No 60 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=1.7e-49  Score=392.34  Aligned_cols=252  Identities=17%  Similarity=0.222  Sum_probs=202.4

Q ss_pred             ccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCC-CCccceeEEEEeCCeEE
Q 010603          109 GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-PFLPTLYSHFETDKFSC  187 (506)
Q Consensus       109 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~  187 (506)
                      .-++|+++++||+|+||+||+|+++.+|+.||||++.+...     ...+.+|+++++.|+| +||+.+++++......|
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   77 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV   77 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence            34679999999999999999999999999999999876432     1235678899999965 89999999999999999


Q ss_pred             EEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEec-----CCCEEEeecCCccc
Q 010603          188 LLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVRE-----DGHIMLSDFDLSLR  262 (506)
Q Consensus       188 lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-----~~~vkl~DFGla~~  262 (506)
                      +||||| +++|.+++... +..+++..+..++.|++.||+|||++|||||||||+||||+.     ++.+||+|||+|+.
T Consensus        78 ~vme~~-~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          78 LVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEEEec-CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            999999 89999988764 357999999999999999999999999999999999999974     57899999999965


Q ss_pred             cccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCcccccCC
Q 010603          263 CFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLPVLIAEP  342 (506)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (506)
                      .........                                                                      .
T Consensus       156 ~~~~~~~~~----------------------------------------------------------------------~  165 (293)
T d1csna_         156 YRDPVTKQH----------------------------------------------------------------------I  165 (293)
T ss_dssp             SBCTTTCCB----------------------------------------------------------------------C
T ss_pred             cccCccccc----------------------------------------------------------------------e
Confidence            321110000                                                                      0


Q ss_pred             CCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcH---HHHHHHhCCCCCCC---CCCCCC
Q 010603          343 TSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR---ETLFNVVGQPLKFP---EGSSIS  416 (506)
Q Consensus       343 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~~~~~p---~~~~~s  416 (506)
                      ........+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....   +.+..+.......+   ....++
T Consensus       166 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p  245 (293)
T d1csna_         166 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP  245 (293)
T ss_dssp             CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSC
T ss_pred             eecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCC
Confidence            001123458999999999999999999999999999999999999999865432   22333322111111   013588


Q ss_pred             HHHHHHHHHHhhcCCCCccCC
Q 010603          417 FAAKDLIRGLLVKDPQKRLGF  437 (506)
Q Consensus       417 ~~~~~li~~~L~~dP~~R~s~  437 (506)
                      +++.+|+..|+..+|++||++
T Consensus       246 ~~l~~ii~~~~~~~~~~rP~y  266 (293)
T d1csna_         246 EEFYKYMHYARNLAFDATPDY  266 (293)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCH
T ss_pred             HHHHHHHHHHhcCCcccCcCH
Confidence            999999999999999999973


No 61 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-49  Score=390.73  Aligned_cols=248  Identities=23%  Similarity=0.300  Sum_probs=189.7

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHH--HHHhcCCCCccceeEEEEeCC----
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE--ILSLLDHPFLPTLYSHFETDK----  184 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~--il~~l~hpnIv~l~~~~~~~~----  184 (506)
                      ++|.+.+.||+|+||.||+|++.  |+.||||+++...      .....+|.+  .+..++|||||++++++.+.+    
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccc------hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcce
Confidence            46999999999999999999874  8999999997542      122333444  456789999999999997654    


Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCeEEccCCCCcEEEecCCCEEEee
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM--------MGVVYRDLKPENVLVREDGHIMLSD  256 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~--------~giiHrDLKp~NILl~~~~~vkl~D  256 (506)
                      .+|||||||++|+|.+++++.   .+++..+..++.|++.||+|||+        +|||||||||+||||+.++++||+|
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~D  151 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEe
Confidence            689999999999999999874   69999999999999999999996        5999999999999999999999999


Q ss_pred             cCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCccccccccccccccccCCCCCCCc
Q 010603          257 FDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKVKSEKTSLTNSDSLP  336 (506)
Q Consensus       257 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (506)
                      ||+++.+.......                                                                  
T Consensus       152 FGl~~~~~~~~~~~------------------------------------------------------------------  165 (303)
T d1vjya_         152 LGLAVRHDSATDTI------------------------------------------------------------------  165 (303)
T ss_dssp             CTTCEEEETTTTEE------------------------------------------------------------------
T ss_pred             cCccccccCCCcce------------------------------------------------------------------
Confidence            99986532211100                                                                  


Q ss_pred             ccccCCCCCCccccccCCCCccchhhcCCC------CCcchhHHHHHHHHHHHhcCCCCCCCCC--------------cH
Q 010603          337 VLIAEPTSARSMSFVGTHEYLAPEIIRGDG------HGSAVDWWTFGIFFYELLLGRTPFKGNG--------------NR  396 (506)
Q Consensus       337 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~~~~DiWSlGvil~elltG~~Pf~~~~--------------~~  396 (506)
                             .......+||+.|||||++.+..      ++.++|||||||+||||+||..||....              ..
T Consensus       166 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T d1vjya_         166 -------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             -------CC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             -------eccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence                   00122357999999999997653      5779999999999999999998874321              12


Q ss_pred             HHHHHHh-CCCCC--CCCC---CCCCHHHHHHHHHHhhcCCCCccCCCCChHHhhc
Q 010603          397 ETLFNVV-GQPLK--FPEG---SSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQ  446 (506)
Q Consensus       397 ~~~~~i~-~~~~~--~p~~---~~~s~~~~~li~~~L~~dP~~R~s~~~~a~ell~  446 (506)
                      +.+.... ....+  ++..   ......+.+|+.+||+.||++|||    +.||++
T Consensus       239 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ei~~  290 (303)
T d1vjya_         239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKK  290 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence            2233332 22221  1111   112345889999999999999998    778776


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3.5e-48  Score=393.78  Aligned_cols=262  Identities=23%  Similarity=0.374  Sum_probs=200.5

Q ss_pred             CCCc-ccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcC-----------CCC
Q 010603          105 DGDL-GLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD-----------HPF  172 (506)
Q Consensus       105 ~~~~-~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-----------hpn  172 (506)
                      .|+. ..++|+++++||+|+||+||+|+++.+|+.||||++++...    ....+.+|+.+|+.++           |+|
T Consensus         6 ~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~----~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_           6 KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             TTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             CCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc----chHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            4554 33679999999999999999999999999999999987532    2345677888887765           578


Q ss_pred             ccceeEEEEe--CCeEEEEEeecCCCCh-HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeEEccCCCCcEEEec
Q 010603          173 LPTLYSHFET--DKFSCLLMEFCSGGDL-HTLRQRQPGKHFSEQATRFYASEVLLALEYLHM-MGVVYRDLKPENVLVRE  248 (506)
Q Consensus       173 Iv~l~~~~~~--~~~~~lV~E~~~gg~L-~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~  248 (506)
                      ||++++++..  ....+++|+++..+.+ ...........+++..++.++.||+.||+|||+ .||+||||||+||||+.
T Consensus        82 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~  161 (362)
T d1q8ya_          82 ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  161 (362)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             eEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeec
Confidence            9999998864  4567777777655543 334444555789999999999999999999998 89999999999999987


Q ss_pred             CCC------EEEeecCCccccccCCccccCCCCcccccCcccCCCCCCCCCCCCCccCCCCCCCCCCCCCcccccccccc
Q 010603          249 DGH------IMLSDFDLSLRCFVSPKLVQSSDDPACRISSYCIQPSCIDPACKLPVCVEPSCLQPSCFKPRFLNSKTTKV  322 (506)
Q Consensus       249 ~~~------vkl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (506)
                      ++.      +||+|||.|.....                                                         
T Consensus       162 ~~~~~~~~~~kl~dfg~s~~~~~---------------------------------------------------------  184 (362)
T d1q8ya_         162 VDSPENLIQIKIADLGNACWYDE---------------------------------------------------------  184 (362)
T ss_dssp             EETTTTEEEEEECCCTTCEETTB---------------------------------------------------------
T ss_pred             cCcccccceeeEeeccccccccc---------------------------------------------------------
Confidence            664      99999999843110                                                         


Q ss_pred             ccccccCCCCCCCcccccCCCCCCccccccCCCCccchhhcCCCCCcchhHHHHHHHHHHHhcCCCCCCCCCcH------
Q 010603          323 KSEKTSLTNSDSLPVLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLLGRTPFKGNGNR------  396 (506)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiWSlGvil~elltG~~Pf~~~~~~------  396 (506)
                                             .....+||+.|+|||++.+..|+.++||||+||+++||++|+.||......      
T Consensus       185 -----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~  241 (362)
T d1q8ya_         185 -----------------------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  241 (362)
T ss_dssp             -----------------------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             -----------------------ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchh
Confidence                                   012237999999999999999999999999999999999999999754321      


Q ss_pred             HHHH---HHhCCC---------------------CCCC----------------CCCCCCHHHHHHHHHHhhcCCCCccC
Q 010603          397 ETLF---NVVGQP---------------------LKFP----------------EGSSISFAAKDLIRGLLVKDPQKRLG  436 (506)
Q Consensus       397 ~~~~---~i~~~~---------------------~~~p----------------~~~~~s~~~~~li~~~L~~dP~~R~s  436 (506)
                      +.+.   .+++..                     ....                .....+++++|||.+||..||.+|||
T Consensus       242 ~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpt  321 (362)
T d1q8ya_         242 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD  321 (362)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred             HHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcC
Confidence            1111   111110                     0000                01124567999999999999999998


Q ss_pred             CCCChHHhhcCCCCCCCC
Q 010603          437 FKRGATEIKQHPFFESVN  454 (506)
Q Consensus       437 ~~~~a~ell~hp~f~~~~  454 (506)
                          |+|||+||||++..
T Consensus       322 ----a~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         322 ----AGGLVNHPWLKDTL  335 (362)
T ss_dssp             ----HHHHHTCGGGTTCT
T ss_pred             ----HHHHhcCcccCCCC
Confidence                99999999998654


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.95  E-value=7.3e-28  Score=221.38  Aligned_cols=135  Identities=22%  Similarity=0.200  Sum_probs=106.9

Q ss_pred             eEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhc---------------hhHHHHHHHHHHHHHhcCCCCcccee
Q 010603          113 FRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAG---------------RKKLMRAQTEREILSLLDHPFLPTLY  177 (506)
Q Consensus       113 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~---------------~~~~~~~~~E~~il~~l~hpnIv~l~  177 (506)
                      |.+.++||+|+||+||+|++. +|+.||||+++......               .........|...|..+.|++++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            568899999999999999986 58999999986432110               11123345688889999999999988


Q ss_pred             EEEEeCCeEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEccCCCCcEEEecCCCEEEeec
Q 010603          178 SHFETDKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDF  257 (506)
Q Consensus       178 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF  257 (506)
                      ++..    .++||||+++..+..         +++..+..++.||+.+|+|||++||+||||||+|||++++ .++|+||
T Consensus        81 ~~~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          81 AWEG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             EEET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCC
T ss_pred             EecC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEEC
Confidence            7532    379999998876643         4445567899999999999999999999999999999965 4999999


Q ss_pred             CCccc
Q 010603          258 DLSLR  262 (506)
Q Consensus       258 Gla~~  262 (506)
                      |+|..
T Consensus       147 G~a~~  151 (191)
T d1zara2         147 PQSVE  151 (191)
T ss_dssp             TTCEE
T ss_pred             CCccc
Confidence            99853


No 64 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.68  E-value=4.3e-08  Score=91.86  Aligned_cols=139  Identities=17%  Similarity=0.128  Sum_probs=92.8

Q ss_pred             CCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEE
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD-HPFLPTLYSHFETDKFSCLL  189 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV  189 (506)
                      ..|++++..+-++.+.||+...  .++.+.||+.......   ....+.+|..+|+.|. +--+.+++.+...++..|+|
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv   88 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEE
Confidence            4588888766666789998863  3667889987654322   2223566888888774 43467888888889999999


Q ss_pred             EeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------
Q 010603          190 MEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALEYLHM--------------------------------------  231 (506)
Q Consensus       190 ~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~--------------------------------------  231 (506)
                      |++++|..+.......    ..   ...++.++...|..||+                                      
T Consensus        89 ~~~l~G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T d1j7la_          89 MSEADGVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EECCSSEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTT
T ss_pred             EEeccccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccccc
Confidence            9999998875432110    00   11122222222333331                                      


Q ss_pred             ---------------------CCeEEccCCCCcEEEecCCCEEEeecCCcc
Q 010603          232 ---------------------MGVVYRDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       232 ---------------------~giiHrDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                                           ..++|+|+.|.|||+++++.+-|+||+.+.
T Consensus       162 ~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                                 128999999999999977666799999874


No 65 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=98.19  E-value=3.2e-06  Score=84.02  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=50.3

Q ss_pred             EeEEeecCceEEEEEEEccCCceEEEEEeccch-hhc---hhHHHHHHHHHHHHHhcC-C--CCccceeEEEEeCCeEEE
Q 010603          116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGM-LAG---RKKLMRAQTEREILSLLD-H--PFLPTLYSHFETDKFSCL  188 (506)
Q Consensus       116 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~-~~~---~~~~~~~~~E~~il~~l~-h--pnIv~l~~~~~~~~~~~l  188 (506)
                      .+.||.|....||++....+++.|+||.-.... ...   .....+...|.++|+.+. +  ..+++++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            567899999999999988878899999654311 000   112344567888887663 2  345566543  4455678


Q ss_pred             EEeecCCCC
Q 010603          189 LMEFCSGGD  197 (506)
Q Consensus       189 V~E~~~gg~  197 (506)
                      |||++.+..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997654


No 66 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.11  E-value=4.3e-06  Score=77.29  Aligned_cols=137  Identities=17%  Similarity=0.069  Sum_probs=83.1

Q ss_pred             EEeecCc-eEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCC--CCccceeEEEEeCCeEEEEEeecC
Q 010603          118 KLGCGDI-GSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH--PFLPTLYSHFETDKFSCLLMEFCS  194 (506)
Q Consensus       118 ~LG~G~f-G~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~lV~E~~~  194 (506)
                      .+..|.. +.||+.... ++..+.+|.-....      ...+..|+++|+.|..  --+.+++.+..+++..++|||+++
T Consensus        17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~   89 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   89 (255)
T ss_dssp             ECSCTTSSCEEEEEECT-TSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             EcCCcccCCeEEEEEeC-CCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence            4455553 689998764 36678899865432      1235668888877742  336778888888889999999998


Q ss_pred             CCChHH--------------HHhh-C----CCCCCC--HHHH-----HHH---------------HHHHHHHHHHHHh--
Q 010603          195 GGDLHT--------------LRQR-Q----PGKHFS--EQAT-----RFY---------------ASEVLLALEYLHM--  231 (506)
Q Consensus       195 gg~L~~--------------~l~~-~----~~~~~~--e~~~-----~~i---------------~~qil~aL~yLH~--  231 (506)
                      |.++..              .+.+ +    ....+.  ....     ..+               .......+..+..  
T Consensus        90 G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  169 (255)
T d1nd4a_          90 GQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARM  169 (255)
T ss_dssp             SEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTC
T ss_pred             ccccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhC
Confidence            876532              1111 0    000000  0000     000               0011122333332  


Q ss_pred             -----CCeEEccCCCCcEEEecCCCEEEeecCCcc
Q 010603          232 -----MGVVYRDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       232 -----~giiHrDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                           ..+||+|+.|.|||++.++.+-|+||+.+.
T Consensus       170 ~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         170 PDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             CSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             CccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence                 238999999999999987667899999874


No 67 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.40  E-value=0.00027  Score=69.64  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=52.7

Q ss_pred             CCeEEEeEEeecCceEEEEEEEcc-------CCceEEEEEeccchhhchhHHHHHHHHHHHHHhcC-CCCccceeEEEEe
Q 010603          111 GHFRLLKKLGCGDIGSVYLAELRD-------MGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLD-HPFLPTLYSHFET  182 (506)
Q Consensus       111 ~~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~  182 (506)
                      +++++ +.|+-|-.-.+|++....       ..+.|.+++....    .. .....+|..+++.+. +.-..++++++..
T Consensus        43 ~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~----~~-~idr~~E~~i~~~ls~~gl~Pkll~~~~~  116 (395)
T d1nw1a_          43 EHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ET-ESHLVAESVIFTLLSERHLGPKLYGIFSG  116 (395)
T ss_dssp             GGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CC-HHHHHHHHHHHHHHHHTTSSSCEEEEETT
T ss_pred             cceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc----ch-hhHHHHHHHHHHHHHhCCCCCeEEEEcCC
Confidence            33544 678889999999998753       2456888876532    11 223457888988884 4444578887753


Q ss_pred             CCeEEEEEeecCCCCh
Q 010603          183 DKFSCLLMEFCSGGDL  198 (506)
Q Consensus       183 ~~~~~lV~E~~~gg~L  198 (506)
                          .+||||++|..|
T Consensus       117 ----g~I~efi~g~~l  128 (395)
T d1nw1a_         117 ----GRLEEYIPSRPL  128 (395)
T ss_dssp             ----EEEECCCCEEEC
T ss_pred             ----ceEEEEeccccC
Confidence                589999987554


No 68 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.23  E-value=0.00055  Score=65.41  Aligned_cols=69  Identities=12%  Similarity=0.050  Sum_probs=44.8

Q ss_pred             ceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCCCCc-----cce--eEEEEeCCeEEEEEeecCCC
Q 010603          124 IGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDHPFL-----PTL--YSHFETDKFSCLLMEFCSGG  196 (506)
Q Consensus       124 fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l--~~~~~~~~~~~lV~E~~~gg  196 (506)
                      --.||++... +|..|++|+.+....    ...++..|...|..|....|     +..  -..+...+..+.|++++.|.
T Consensus        35 EN~vy~v~~~-dg~~~VlK~~rp~~~----s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          35 ENRVYQFQDE-DRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SSEEEEECCT-TCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             cceeEEEEcC-CCCEEEEEEeCCCCC----CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            3589999875 488899999876532    23445668888777642211     111  12345677889999999764


Q ss_pred             C
Q 010603          197 D  197 (506)
Q Consensus       197 ~  197 (506)
                      .
T Consensus       110 ~  110 (325)
T d1zyla1         110 Q  110 (325)
T ss_dssp             E
T ss_pred             C
Confidence            3


No 69 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.96  E-value=0.0023  Score=60.34  Aligned_cols=147  Identities=18%  Similarity=0.108  Sum_probs=79.7

Q ss_pred             cccCCeEEEeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHHHHHhcCC-----CCccceeE---E
Q 010603          108 LGLGHFRLLKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTEREILSLLDH-----PFLPTLYS---H  179 (506)
Q Consensus       108 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~l~~---~  179 (506)
                      ..++...-++.|..|---+.|+.....  ..|++|+..+..     ....+..|+++|..|..     |..+...+   +
T Consensus        15 Y~lg~~~~~~~i~~G~~N~ny~v~t~~--g~yVLri~~~~~-----~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~   87 (316)
T d2ppqa1          15 YDVGSLTSYKGIAEGVENSNFLLHTTK--DPLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELL   87 (316)
T ss_dssp             BCCCCEEEEEEECC---EEEEEEEESS--CCEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSC
T ss_pred             CCCCCceEeecCCCCcccCeEEEEECC--CcEEEEEcCCCC-----CHHHHHHHHHHHHhhhhccccccccceecCCCcc
Confidence            345666767778888889999997663  459999987532     11233456677666632     22222111   2


Q ss_pred             EEeCCeEEEEEeecCCCChHH-----------H---Hhh-CC------CCCC------------------CHHHHHHHHH
Q 010603          180 FETDKFSCLLMEFCSGGDLHT-----------L---RQR-QP------GKHF------------------SEQATRFYAS  220 (506)
Q Consensus       180 ~~~~~~~~lV~E~~~gg~L~~-----------~---l~~-~~------~~~~------------------~e~~~~~i~~  220 (506)
                      .........++.++.|.....           .   +.. ..      ....                  ........+.
T Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  167 (316)
T d2ppqa1          88 GELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIR  167 (316)
T ss_dssp             EEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHH
T ss_pred             eeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHH
Confidence            233456667777776644311           0   000 00      0000                  0111111222


Q ss_pred             HHHHHHHHHHh----CCeEEccCCCCcEEEecCCCEEEeecCCcc
Q 010603          221 EVLLALEYLHM----MGVVYRDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       221 qil~aL~yLH~----~giiHrDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                      .+...+.-.+.    .|+||+|+.++|||++.+...-|+||+.+.
T Consensus       168 ~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         168 PEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             HHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            23333333332    479999999999999988777899999884


No 70 
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=54.29  E-value=72  Score=29.03  Aligned_cols=25  Identities=28%  Similarity=0.543  Sum_probs=22.1

Q ss_pred             ccCCCCcEEEecCCCEEEeecCCcc
Q 010603          237 RDLKPENVLVREDGHIMLSDFDLSL  261 (506)
Q Consensus       237 rDLKp~NILl~~~~~vkl~DFGla~  261 (506)
                      +|=.++||||+.+|++.=+|||...
T Consensus       220 gDRH~~NILi~~~G~l~HIDFG~il  244 (369)
T d1e7ua4         220 GDRHNDNIMISETGNLFHIDFGHIL  244 (369)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             CCCCCCeeEEeCCCCEEecchhhhh
Confidence            4778999999999999999999873


No 71 
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=51.67  E-value=21  Score=32.20  Aligned_cols=73  Identities=21%  Similarity=0.358  Sum_probs=41.5

Q ss_pred             eEEEEEeecCCCChHHHHhhCCCCCCCHHHHHHHHHHHHHHHH-HHHhC---CeEEccC-CCCcEEEecCC-CEEEeecC
Q 010603          185 FSCLLMEFCSGGDLHTLRQRQPGKHFSEQATRFYASEVLLALE-YLHMM---GVVYRDL-KPENVLVREDG-HIMLSDFD  258 (506)
Q Consensus       185 ~~~lV~E~~~gg~L~~~l~~~~~~~~~e~~~~~i~~qil~aL~-yLH~~---giiHrDL-Kp~NILl~~~~-~vkl~DFG  258 (506)
                      ...++|||++|..|.+.-.......+.++.+..+-+  +-+++ +++..   .+++|+- .+.|||+..+| .+..+|=|
T Consensus       156 A~~liMeYvpG~~l~e~~~~~a~~~fs~~~l~~LGk--IiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~~~~~IDs~  233 (342)
T d1cjaa_         156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK  233 (342)
T ss_dssp             SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred             ccceeeeccCCccccccccccchhhhcHHHHHHhhh--HHHHHHHHcCCccccccccCCCCccceEEecCCcEEEEecCC
Confidence            367899999998886542211011233333332211  33444 34432   3566632 78999999877 77888855


Q ss_pred             C
Q 010603          259 L  259 (506)
Q Consensus       259 l  259 (506)
                      .
T Consensus       234 i  234 (342)
T d1cjaa_         234 I  234 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4


No 72 
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.67  E-value=48  Score=30.51  Aligned_cols=113  Identities=11%  Similarity=0.205  Sum_probs=62.9

Q ss_pred             EeEEeecCceEEEEEEEccCCceEEEEEeccchhhchhHHHHHHHHHH-HHHh-cCCCCccceeEEEEe----CCeEEEE
Q 010603          116 LKKLGCGDIGSVYLAELRDMGCLFAMKVMDKGMLAGRKKLMRAQTERE-ILSL-LDHPFLPTLYSHFET----DKFSCLL  189 (506)
Q Consensus       116 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~-l~hpnIv~l~~~~~~----~~~~~lV  189 (506)
                      +...+.|..|..+...   ....+.||.+.+...   +.+.++....- -+.. -.+.-|++++|.|.-    ....++|
T Consensus        94 ~~~~s~GkSGs~F~~t---~D~rfiiKti~~~E~---~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~~~~~~~fvV  167 (383)
T d1bo1a_          94 INSDSQGRCGTRFLTT---YDRRFVIKTVSSEDV---AEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVV  167 (383)
T ss_dssp             EECCCC----CCEEEC---TTSSEEEECCCHHHH---HHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEETTEEEEEEE
T ss_pred             ccccccCCcCCeEEEe---cCCcEEEEEeCHHHH---HHHHHHHHHHHHHHHhcCCCcCHHhhheeeEEEeCCceEEEEE
Confidence            3445668888776643   245799999976432   12222222221 1211 234568899998742    2356789


Q ss_pred             EeecCCCCh-----------------------------H--HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Q 010603          190 MEFCSGGDL-----------------------------H--TLRQRQPGKHFSEQATRFYASEVLLALEYLHMMGV  234 (506)
Q Consensus       190 ~E~~~gg~L-----------------------------~--~~l~~~~~~~~~e~~~~~i~~qil~aL~yLH~~gi  234 (506)
                      |+.+-.+.+                             .  ++++....-.+.++....++.||-.=.++|.+.+|
T Consensus       168 M~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~~~i  243 (383)
T d1bo1a_         168 TRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKI  243 (383)
T ss_dssp             EECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EeccccCCcccceeEeccCcccccCcCcccccccchhhhhHHHHhccCCeeeCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            997632221                             1  12332222345677777889999999999999875


Done!