BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010608
(506 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL
PE=1 SV=1
Length = 314
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/312 (63%), Positives = 234/312 (75%), Gaps = 17/312 (5%)
Query: 208 PVSRSPSPHTKRLRRADAKVT---EREREND-HSRASDKDIHRERVSERETGSERKERRE 263
P SRSPSP TKRLRRA + RERE+D R R+R R+ ERK E
Sbjct: 3 PSSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGEGE 62
Query: 264 RDFEGDREGRKLGRNEASNQS---------SRSRRDRSTSPLDRPPRSRHRSPQSADGSW 314
RD E + R+ GR + + SR R +RSTSP DR RS RSP+ A S
Sbjct: 63 RDREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPERAIAS- 121
Query: 315 ARHEVMNS--GGAEYRNDDIDSVAQMKAAEEALQAKEKQKPSFELSGKLAAETNRFRGVT 372
RH+ ++ GG+E N + DSVA+M+A EEAL AK+K++PSFELSGKLA ETNR+RG+T
Sbjct: 122 -RHDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGIT 180
Query: 373 LLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQ 432
LLFNEPP+ARKPS RWRLYVFK GE L EPL +HRQSCYLFGRERR+ADIPTDHPSCSKQ
Sbjct: 181 LLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQ 240
Query: 433 HAVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYLNDNPIEPQRYYELFEKDTIKFGN 492
HAVIQ+R++EKE+PDGM+ K+V+PYIMDLGSTNKTY+N++PIEPQRYYELFEKDTIKFGN
Sbjct: 241 HAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTYINESPIEPQRYYELFEKDTIKFGN 300
Query: 493 SSREYVLLHENS 504
SSREYVLLHENS
Sbjct: 301 SSREYVLLHENS 312
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 69 QSPVSRSPSPRTRRLMRSRDERELGKVTERE 99
+P SRSPSPRT+RL R+R E+E+G+ ERE
Sbjct: 1 MAPSSRSPSPRTKRLRRARGEKEIGRSRERE 31
>sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1
SV=1
Length = 396
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 205/389 (52%), Gaps = 63/389 (16%)
Query: 117 SSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGERTRSPVSRSPSPRTKRL 176
SPSP T AR+ G+ R R + + +G+ RS SPR+KR
Sbjct: 50 GGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR------------RSKSPRSKRN 97
Query: 177 RRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDH 236
R H K ++H R R + H R PS E+E+
Sbjct: 98 RSPHHSTVKVKQEREDHPR---RGREDRQH----REPS----------------EQEHRR 134
Query: 237 SRASDKDIHRERVSERETGSERKERRERDFEGDREGRKLGRNEASNQSSRSRRDRSTSPL 296
+R SD+D HR +R T +ER G +G+ R+ + Q+ R+ +
Sbjct: 135 ARNSDRDRHRGHSHQRRTSNERP--------GSGQGQGRDRDTQNLQAQEEEREFYNA-- 184
Query: 297 DRPPRSRHRSPQSADGSWARHEVMNSGGAEYRNDDIDSVAQMKAAEEALQAKEKQKPSFE 356
R R R+ GS ++ V GG E+ + AKE KPSFE
Sbjct: 185 -RRREHRQRNDVGGGGSESQELVPRPGG--------------NNKEKEVPAKE--KPSFE 227
Query: 357 LSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRE 416
LSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL GR
Sbjct: 228 LSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYLLGRH 286
Query: 417 RRVADIPTDHPSCSKQHAVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYLNDNPIEP 476
RR+ADIP DHPSCSKQHAV Q+R VE + DG + + V+PYI+DLGS N T+LN+ IEP
Sbjct: 287 RRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEP 346
Query: 477 QRYYELFEKDTIKFGNSSREYVLLHENSN 505
QRYYEL EKD +KFG SSREYVLLHE+S+
Sbjct: 347 QRYYELKEKDVLKFGFSSREYVLLHESSD 375
>sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1
PE=2 SV=1
Length = 389
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 350 KQKPSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQS 409
K+KPSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS
Sbjct: 212 KEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLP-VMYIHRQS 270
Query: 410 CYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYL 469
YL GR RR+ADIP DHPSCSKQHAV Q+R VE + DG + + V+PYI+DLGS N T+L
Sbjct: 271 AYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFL 330
Query: 470 NDNPIEPQRYYELFEKDTIKFGNSSREYVLLHENSN 505
N+ IEPQRYYEL EKD +KFG SSREYVLLHE+S+
Sbjct: 331 NNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESSD 366
>sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1
SV=1
Length = 383
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 350 KQKPSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQS 409
K+KPSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS
Sbjct: 208 KEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQS 266
Query: 410 CYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYL 469
YL GR RR+ADIP DHPSCSKQHAV Q+R VE + DG + + V+PYI+DLGS N T+L
Sbjct: 267 AYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFL 326
Query: 470 NDNPIEPQRYYELFEKDTIKFGNSSREYVLLHENSN 505
N+ IEPQRYYEL EKD +KFG SSREYVLLHE+S+
Sbjct: 327 NNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESSD 362
>sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133
OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1
Length = 1505
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Query: 371 VTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCS 430
+ L ++EP +A+ P+ +W LY FK + L + +Y+HR+ +LFGR R +ADIP DHPSCS
Sbjct: 1360 IKLKWHEPAEAKLPTEKWMLYPFKGKDQL-DTIYLHRKKSFLFGRNRDIADIPIDHPSCS 1418
Query: 431 KQHAVIQFRQVEKEQPD-GMLSKEVRPYIMDLGSTNKTYLNDNPIEPQRYYELFEKDTIK 489
QHAVI FR +KE P+ G + + PYI+DL STN T+L IEP +Y+EL KD I
Sbjct: 1419 SQHAVIVFRIRKKENPNTGSIKTFILPYIIDLESTNGTFLKGEKIEPAKYFELRPKDKIT 1478
Query: 490 FGNSSREYVLLHEN 503
FG S+REY+LL E+
Sbjct: 1479 FGTSTREYILLCED 1492
>sp|Q8R3G1|PP1R8_MOUSE Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus
GN=Ppp1r8 PE=1 SV=1
Length = 351
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 361 LAAETNRFRGVTL-LFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRV 419
+AA N G +L LF+ P A KP L V K G+ L E L I + YLFGR +
Sbjct: 1 MAAAVNS--GSSLPLFDCPTWAGKPPPGLHLDVVK-GDKLIEKLIIDEKKYYLFGRNPDL 57
Query: 420 ADIPTDHPSCSKQHAVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYLNDNPIEPQRY 479
D DH SCS+ HA + + + K R +++DL ST+ T+L +EP +
Sbjct: 58 CDFTIDHQSCSRVHAALVYHKHLK-----------RVFLIDLNSTHGTFLGHIRLEPHKP 106
Query: 480 YELFEKDTIKFGNSSREYVL 499
++ T+ FG S+R Y L
Sbjct: 107 QQIPIDSTVSFGASTRAYTL 126
>sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens
GN=PPP1R8 PE=1 SV=2
Length = 351
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 374 LFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQH 433
LF+ P A KP L V K G+ L E L I + YLFGR + D DH SCS+ H
Sbjct: 13 LFDCPTWAGKPPPGLHLDVVK-GDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVH 71
Query: 434 AVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYLNDNPIEPQRYYELFEKDTIKFGNS 493
A + + + K R +++DL ST+ T+L +EP + ++ T+ FG S
Sbjct: 72 AALVYHKHLK-----------RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGAS 120
Query: 494 SREYVL 499
+R Y L
Sbjct: 121 TRAYTL 126
>sp|Q28147|PP1R8_BOVIN Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8
PE=1 SV=1
Length = 351
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 374 LFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQH 433
LF+ P A KP L V K G+ L E L I + YLFGR + D DH SCS+ H
Sbjct: 13 LFDCPTWAGKPPPGLHLDVVK-GDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVH 71
Query: 434 AVIQFRQVEKEQPDGMLSKEVRPYIMDLGSTNKTYLNDNPIEPQRYYELFEKDTIKFGNS 493
A + + + K R +++DL ST+ T+L +EP + ++ T+ FG S
Sbjct: 72 AALVYHKHLK-----------RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGAS 120
Query: 494 SREYVL 499
+R Y L
Sbjct: 121 TRAYTL 126
>sp|Q07930|PML1_YEAST Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PML1 PE=1 SV=1
Length = 204
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 70/168 (41%), Gaps = 39/168 (23%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQ---- 408
P F SG L E+N G+ L EP DA P + +A + L I+R+
Sbjct: 30 PDFSPSGLLELESNNKEGIALKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKNDKD 89
Query: 409 ------------SCYLFGRER--------------RVADIPTDHPSCSKQHAVIQFRQVE 442
SCYL GRE VADI + SKQH VIQFR V
Sbjct: 90 KGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVR 149
Query: 443 KEQPDGMLSKEVRPYIMDLGSTNKTYLNDNPIEPQRYYELFEKDTIKF 490
G+L + Y+MDL S+N T LN+ I RY EL D +
Sbjct: 150 -----GIL----KCYVMDLDSSNGTCLNNVVIPGARYIELRSGDVLTL 188
>sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1
Length = 796
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 375 FNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHA 434
+ EPP + + L K G +L C LFGR D+ +HPS S+ HA
Sbjct: 154 YQEPPWGGPATAPYSLETLKGGTILGTRSLKGTSYC-LFGR-LSGCDVCLEHPSVSRYHA 211
Query: 435 VIQFRQVEKEQPDGML-SKEVRPYIMDLGSTNKTYLNDNPIEPQRYYELFEKDTIKFGNS 493
V+Q R PDG S Y+ DLGST+ T+LN I P+ Y + ++FG S
Sbjct: 212 VLQHR---ASGPDGECDSNGPGFYLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGS 268
Query: 494 SREYVL 499
+R ++L
Sbjct: 269 TRLFIL 274
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,979,488
Number of Sequences: 539616
Number of extensions: 8815341
Number of successful extensions: 53911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 1886
Number of HSP's that attempted gapping in prelim test: 31585
Number of HSP's gapped (non-prelim): 10231
length of query: 506
length of database: 191,569,459
effective HSP length: 122
effective length of query: 384
effective length of database: 125,736,307
effective search space: 48282741888
effective search space used: 48282741888
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)