Query 010609
Match_columns 506
No_of_seqs 159 out of 1366
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 10:28:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.8E-77 6.3E-82 629.0 39.7 423 11-490 5-438 (439)
2 2xr7_A Malonyltransferase; xen 100.0 1.3E-76 4.5E-81 625.4 35.5 433 13-495 1-453 (453)
3 2e1v_A Acyl transferase; BAHD 100.0 1.2E-75 4.1E-80 618.2 40.1 434 12-495 5-453 (454)
4 2bgh_A Vinorine synthase; VS, 100.0 4E-72 1.4E-76 585.4 37.9 409 11-503 2-420 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 9.1E-62 3.1E-66 512.0 30.2 397 46-486 5-439 (451)
6 1q9j_A PAPA5, polyketide synth 98.8 8.7E-07 3E-11 90.9 24.0 292 43-395 5-313 (422)
7 1l5a_A Amide synthase, VIBH; n 98.5 6.1E-05 2.1E-09 77.5 29.1 269 64-396 24-305 (436)
8 2jgp_A Tyrocidine synthetase 3 98.5 6E-05 2E-09 79.7 26.8 289 43-395 94-400 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.3 6.4E-05 2.2E-09 78.9 21.1 291 42-396 10-328 (493)
10 2xhg_A Tyrocidine synthetase A 98.1 0.00088 3E-08 69.3 25.7 303 43-396 15-336 (466)
11 2vsq_A Surfactin synthetase su 98.0 0.00048 1.6E-08 81.1 24.4 300 43-396 10-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.8 0.002 7E-08 67.8 21.0 261 79-372 72-365 (519)
13 3cla_A Type III chloramphenico 71.4 2.5 8.6E-05 38.6 3.3 45 166-210 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 69.9 2.8 9.7E-05 38.4 3.3 44 166-209 171-216 (217)
15 1q23_A Chloramphenicol acetylt 69.7 2.9 9.8E-05 38.4 3.3 45 167-211 168-214 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 67.3 3.4 0.00011 38.5 3.3 30 182-211 204-233 (239)
17 1dpb_A Dihydrolipoyl-transacet 66.3 3.6 0.00012 38.4 3.3 30 182-211 208-237 (243)
18 1scz_A E2, dihydrolipoamide su 66.2 3.7 0.00013 38.1 3.3 30 182-211 196-225 (233)
19 3rqc_A Probable lipoamide acyl 66.1 3.2 0.00011 38.3 2.8 30 182-211 187-216 (224)
20 2ii3_A Lipoamide acyltransfera 64.7 4 0.00014 38.5 3.3 30 182-211 224-253 (262)
21 2xl1_A Arginine attenuator pep 61.4 5.8 0.0002 22.0 2.1 21 309-329 4-24 (26)
22 3mae_A 2-oxoisovalerate dehydr 59.5 5.7 0.0002 37.3 3.3 30 182-211 210-239 (256)
23 3l60_A Branched-chain alpha-ke 57.9 6.4 0.00022 36.9 3.3 30 182-211 205-234 (250)
24 2kl8_A OR15; structural genomi 39.7 22 0.00074 25.3 2.8 36 81-116 11-46 (85)
25 3dva_I Dihydrolipoyllysine-res 39.6 6.2 0.00021 40.1 0.0 30 182-211 391-420 (428)
26 1x93_A Hypothetical protein HP 36.1 38 0.0013 22.6 3.4 23 279-301 2-24 (55)
27 4hhu_A OR280; engineered prote 33.0 50 0.0017 26.6 4.3 36 81-116 93-128 (170)
28 4hhu_A OR280; engineered prote 30.1 50 0.0017 26.6 3.8 35 82-116 13-47 (170)
29 2k1o_A Putative; repressor, tr 27.6 74 0.0025 22.1 3.8 42 276-332 13-54 (66)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.8e-77 Score=629.03 Aligned_cols=423 Identities=25% Similarity=0.372 Sum_probs=344.8
Q ss_pred CCceEEEEeEeecCCCCCCcccccccccccccceeeecCchhccccccCcccEEEEEecCCCCCCchhhhHHHHHHHHHH
Q 010609 11 NNRVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLS 90 (506)
Q Consensus 11 ~~~v~~~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs 90 (506)
.|+|++.++++|+|+.|++ .+.++||+||+++.. .|++.+|||+.++ .. . ...+++||+||+
T Consensus 5 ~~~V~i~~~~~V~P~~~tp-------------~~~~~LS~lD~~~~~-~~~~~~~~y~~~~-~~-~--~~~~~~Lk~sLs 66 (439)
T 4g22_A 5 SMKIEVKESTMVRPAQETP-------------GRNLWNSNVDLVVPN-FHTPSVYFYRPTG-SS-N--FFDAKVLKDALS 66 (439)
T ss_dssp -CCEEEEEEEEECCSSCCC-------------CCEECCCHHHHSCCT-TCCCEEEEECCCS-CT-T--TTCHHHHHHHHH
T ss_pred ceEEEEeeeEEEeCCCCCC-------------CCeecCChhHhCccc-cceeeEEEEcCCC-Cc-c--ccHHHHHHHHHH
Confidence 3789999999999999886 678999999998654 5999999998754 32 1 246899999999
Q ss_pred HHhhhhccCCceeecCCCCCCCEEEEeCCCCCCCCCceEEEEEEecCChhhhccCCCcCccccCCCCCCCCCC--CCCCc
Q 010609 91 LTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTS--DDKAE 168 (506)
Q Consensus 91 ~~L~~~p~LaGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~--~~~~P 168 (506)
++|++||||||||+.+++ |+++|+| +++||.|++|++|++++|+.. .. +...+..|+|..+.. ..+.|
T Consensus 67 ~~L~~f~plAGRl~~~~~-g~~~i~c-------~~~Gv~fv~A~~d~~l~~l~~-~~-p~~~~~~l~p~~~~~~~~~~~p 136 (439)
T 4g22_A 67 RALVPFYPMAGRLKRDED-GRIEIEC-------NGEGVLFVEAESDGVVDDFGD-FA-PTLELRRLIPAVDYSQGISSYA 136 (439)
T ss_dssp HHTTTTGGGGCEEEECTT-SCEEEEC-------CCCCEEEEEEEESSCGGGGTT-CC-CCGGGGGGSCCCCTTSCTTSSC
T ss_pred HHHhhccccceeeeeCCC-CCEEEEE-------CCCCCEEEEEEcCCcHHHhcC-CC-CCHHHHhcCCCCCcccccccCc
Confidence 999999999999998876 8999999 589999999999999999954 22 234566788876543 24679
Q ss_pred EEEEEEEEeCCCeEEEEEeeeeeeccchhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCcccccccc--CCCCCcHHH
Q 010609 169 VIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDRTLIK--DPGGIDLVY 246 (506)
Q Consensus 169 ll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~ 246 (506)
++.+|||+|+|||++||+++||+++||.|+.+|+++||++|||.. ....|++||+++. +|+.....
T Consensus 137 ll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~-----------~~~~P~~dr~~l~~~~pp~~~~~- 204 (439)
T 4g22_A 137 LLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD-----------VTLPPFIDRTLLRARDPPQPQFQ- 204 (439)
T ss_dssp SEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTTCC-----------CSSCCBCCGGGGCCCSSCCCSSC-
T ss_pred eeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCCCC-----------CCCCCccccccccCCCCCCCCcC-
Confidence 999999999999999999999999999999999999999999854 1346899999875 34433211
Q ss_pred HHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHH
Q 010609 247 VKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYAC 326 (506)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~ 326 (506)
+.++.+.+... . ...+. +..+ ..++.+++|+|++++|++||+++.+.. +..++|++|+|+||+|+|
T Consensus 205 ~~~~~~~~~~~----~-~~~~~-~~~~-~~~~~~~~f~fs~~~i~~LK~~a~~~~-------~~~~~St~dal~A~iWr~ 270 (439)
T 4g22_A 205 HIEYQPPPALA----V-SPQTA-ASDS-VPETAVSIFKLTREQISALKAKSKEDG-------NTISYSSYEMLAGHVWRC 270 (439)
T ss_dssp CGGGSCCC----------------------CEEEEEEEECHHHHHHHHHGGGGGG-------CCCCCCHHHHHHHHHHHH
T ss_pred cccccCCCCCc----c-ccccc-ccCC-cccceEEEEEECHHHHHHHHHHhhccC-------CCCCccHHHHHHHHHHHH
Confidence 12222211000 0 00000 0111 146889999999999999999987643 246799999999999999
Q ss_pred hhhcccCCCCCeEEEEEEecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhccccccccchH
Q 010609 327 MVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGLRGDAIVGSE 405 (506)
Q Consensus 327 ~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~~~~~~~~~~ 405 (506)
++|||.+++++.+.+.++||+|+|++||+|++||||++.. +.+.++++||.+ ++|+++ .+||+++++++++++++.+
T Consensus 271 ~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~-~~~~~~~~el~~-~~L~~~A~~Ir~ai~~~~~e~~~~~~ 348 (439)
T 4g22_A 271 ACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFT-ATPIAIAGDLEF-KPVWYAASKIHDALARMDNDYLRSAL 348 (439)
T ss_dssp HHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEE-ECCEEEHHHHHH-SCHHHHHHHHHHHHHTCSHHHHHHHH
T ss_pred HHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeeh-hhcceEHHHHhh-CcHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 9999998888999999999999999999999999999999 999999999997 799999 9999999999999999999
Q ss_pred HHHHHHHHHhhc--c---CCccceEEEecCCCCCccccccCCCccceeeeeeecCCceEEEeecCCC-CeEEEEEEeCHH
Q 010609 406 DKIVRKYEMLKQ--M---GEQSIVLRISGSHRFDVYGPDFGWGKPKKVEPVSIDRRGAICLVENKDG-GGVEVAVVLEKQ 479 (506)
Q Consensus 406 ~~~~~~~~~~~~--~---~~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~~-gg~ev~v~L~~~ 479 (506)
+ |++..++... . .+...++.+|||.++++|++|||||||+++++.....+|.++++|++++ ||++|.|+|+++
T Consensus 349 ~-~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~ 427 (439)
T 4g22_A 349 D-YLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGE 427 (439)
T ss_dssp H-HHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHH
T ss_pred H-HHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHH
Confidence 9 9875422110 0 0113679999999999999999999999999876667899999999765 899999999999
Q ss_pred HHHHHHHHHHh
Q 010609 480 KMEVFSSLFID 490 (506)
Q Consensus 480 ~m~~l~~~~~~ 490 (506)
+|++|+++|++
T Consensus 428 ~m~~f~~~~~~ 438 (439)
T 4g22_A 428 HMKLFQSFLYD 438 (439)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcc
Confidence 99999999875
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.3e-76 Score=625.45 Aligned_cols=433 Identities=35% Similarity=0.663 Sum_probs=348.4
Q ss_pred ceEEEEeEeecCCCCCCcccccccccccccceeeecCchhccccccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHH
Q 010609 13 RVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLT 92 (506)
Q Consensus 13 ~v~~~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~ 92 (506)
+|+|.++++|+|+.|++ +.+.++||.||+++.+.+|++.+|||+.++ ..++|.+..+++||+||+++
T Consensus 1 ~v~v~~~~~V~P~~~~~------------~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~ 67 (453)
T 2xr7_A 1 MASVIEQCQVVPSPGSA------------TELTLPLTYFDHVWLAFHRMRRILFYKLPI-SRPDFVQTIIPTLKDSLSLT 67 (453)
T ss_dssp -CEEEEESCCCCCTTCC------------SEEEEECCHHHHGGGGSCCEEEEEEEECCC-CSHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEEEEecCCCCCC------------CCceECCCHHHhhhhhcCCccEEEEEeCCC-CCchhHHHHHHHHHHHHHHH
Confidence 48999999999998754 478999999999866667999999999765 32223456799999999999
Q ss_pred hhhhccCCceeecCCC-CCCCEEEEeCCCCCCCCCceEEEEEEecCChhhhccCCCcCccccCCCCCCCCCCCCC-----
Q 010609 93 LLHYLPLAGHLMWPPH-AEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSDDK----- 166 (506)
Q Consensus 93 L~~~p~LaGrl~~~~~-~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~----- 166 (506)
|++||||||||+.+++ +|+++|+|+ .++||.|++++++++++++....+.+...+..|+|..+.....
T Consensus 68 L~~~~plAGRl~~~~~~~g~~~i~c~------~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 141 (453)
T 2xr7_A 68 LKYYLPLAGNVACPQDWSGYPELRYV------TGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQL 141 (453)
T ss_dssp HTTSGGGGSCCEEESSTTCCCEEEEE------TTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEE
T ss_pred hhhccccCeeEEccCCCCCCEEEEec------CCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCccccccccc
Confidence 9999999999998653 489999993 3589999999999999999654333444566788875433223
Q ss_pred CcEEEEEEEEeCCCeEEEEEeeeeeeccchhHHHHHHHHHHHHh-cccccccCCCCCCCCCCCCccccccccCCCCCcHH
Q 010609 167 AEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCK-QLDIHLQNKAPSLPERLTPCFDRTLIKDPGGIDLV 245 (506)
Q Consensus 167 ~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wA~~~r-g~~~~~~~~~~~~~~~~~P~~dr~~l~~p~~~~~~ 245 (506)
.|++.+|||+|+|||++||+++||+++||.|+.+|+++||++|| |... ...++.+.|++||+.+.+|+.+...
T Consensus 142 ~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~------~~~~~~~~P~~dr~~l~~p~~~~~~ 215 (453)
T 2xr7_A 142 APVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDE------QFLANEFIPFYDRSVIKDPNGVGMS 215 (453)
T ss_dssp CCCEEEEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCG------GGSCGGGSCBCCCSSSCCSSCHHHH
T ss_pred CCeEEEEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCc------ccCCCCCCCccccccccCCCCcchH
Confidence 89999999999999999999999999999999999999999999 6521 0012345789999988876544322
Q ss_pred HHHhhhhccCCCCCCCCC-CCCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHH
Q 010609 246 YVKHNMAFAGLDPNTRNL-KPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVY 324 (506)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW 324 (506)
+...+... ... .... ...+ .+..+++|+|++++|++||+++.+... ...++|+||+|+||+|
T Consensus 216 ~~~~~~~~-------~~~~~~~~--~~~~--~~~~~~~f~f~~~~i~~Lk~~a~~~~~------~~~~~St~~~l~A~lW 278 (453)
T 2xr7_A 216 IWNEMKKY-------KHMMKMSD--VVTP--PDKVRGTFIITRHDIGKLKNLVLTRRP------KLTHVTSFTVTCAYVW 278 (453)
T ss_dssp TTTTGGGC-------TTTSCCSC--CCCC--CSCCCEEEEECHHHHHHHHHHHHHHSC------CCSCCCHHHHHHHHHH
T ss_pred HHHhcccc-------CCcccccc--ccCC--CCceEEEEEECHHHHHHHHHHHhhcCC------CCCcccHHHHHHHHHH
Confidence 11111100 000 0000 0012 467789999999999999999986531 1258999999999999
Q ss_pred HHhhhcccC-----CCCCeEEEEEEecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhc--c
Q 010609 325 ACMVKAITE-----DANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKG--L 396 (506)
Q Consensus 325 ~~~~rAr~~-----~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~--~ 396 (506)
+|++|||.. ++++.+.+.++||+|+|++||+|++||||++.. +.+.++++||.++++|+++ .+||+++++ +
T Consensus 279 ~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~-~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~ 357 (453)
T 2xr7_A 279 TCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVG-YVARTRQVDLAGKEGFTIAVELIGEAIRKRMK 357 (453)
T ss_dssp HHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCE-EEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccceeee-eeeeeeHHHhcCcchHHHHHHHHHHHHHhhcc
Confidence 999999976 567899999999999999999999999999999 9999999999843799999 999999999 5
Q ss_pred ccc-cccchHHHHHHHHHHhhccCCccceEEEecCCCCCccccccCCCccceeeeeeecCCc--eEEEeecCCC-CeEEE
Q 010609 397 RGD-AIVGSEDKIVRKYEMLKQMGEQSIVLRISGSHRFDVYGPDFGWGKPKKVEPVSIDRRG--AICLVENKDG-GGVEV 472 (506)
Q Consensus 397 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g--~v~i~p~~~~-gg~ev 472 (506)
+++ ++++ + |++..+.+ .....+.||||+++++|++|||||+|.++++...+.+| .++|+|++++ ||++|
T Consensus 358 ~~e~~~~~--~-~~~~~~~~----~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v 430 (453)
T 2xr7_A 358 DEEWILSG--S-WFKEYDKV----DAKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEI 430 (453)
T ss_dssp CHHHHHSS--C-TTSCCCCS----CGGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEE
T ss_pred CCccchhh--H-HHHHHHhh----ccCCcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEE
Confidence 777 8887 6 77642221 12358999999999999999999999999987666788 8888888776 89999
Q ss_pred EEEeCHHHHHHHHHHHHhcccce
Q 010609 473 AVVLEKQKMEVFSSLFIDGLNDE 495 (506)
Q Consensus 473 ~v~L~~~~m~~l~~~~~~~~~~~ 495 (506)
.|+|++++|++|+++|.++|++|
T Consensus 431 ~v~L~~~~m~~f~~~~~~~~~~~ 453 (453)
T 2xr7_A 431 GLSLSKTRMNAFAAMFTHGISFL 453 (453)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999988875
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.2e-75 Score=618.15 Aligned_cols=434 Identities=32% Similarity=0.581 Sum_probs=340.2
Q ss_pred CceEEEEeEeecCCCCCCcccccccccccccceeeecCchhccccccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHH
Q 010609 12 NRVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSL 91 (506)
Q Consensus 12 ~~v~~~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~ 91 (506)
.+|+|.++++|+|+.|++ +.+.++||.||+++.+.+|++.+|||+.++ ..++|.+..+++||+||++
T Consensus 5 ~~v~v~~~~~V~P~~~~~------------~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~ 71 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTL------------GDKSLQLTFFDFFWLRSPPINNLFFYELPI-TRSQFTETVVPNIKHSLSI 71 (454)
T ss_dssp -CEEEEEEEEECCCTTSC------------CCEEEECCHHHHTTTTCCCEEEEEEEECCC-CHHHHHHTHHHHHHHHHHH
T ss_pred ceEEEEEEEEEeCCCCCC------------CCceecCchHHhhhhccCCccEEEEEeCCC-CcchhhHHHHHHHHHHHHH
Confidence 579999999999998754 478999999999866667999999999765 3222335679999999999
Q ss_pred HhhhhccCCceee-cCCCCCCCEEEEeCCCCCCCCCceEEEEEEecCChhhhccCCCcCccccCCCCCCCCCCC-----C
Q 010609 92 TLLHYLPLAGHLM-WPPHAEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSD-----D 165 (506)
Q Consensus 92 ~L~~~p~LaGrl~-~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~-----~ 165 (506)
+|++||||||||+ .++++|+++|+|+ +++||.|++++++.+++++....+.+...+..|+|..+... .
T Consensus 72 ~L~~~~plAGRl~~~~~~~g~~~i~c~------~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 145 (454)
T 2e1v_A 72 TLKHFYPFVGKLVVYPAPTKKPEICYV------EGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCI 145 (454)
T ss_dssp HHTTCGGGGSEEEECSSSSSCCEEEEC------TTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCE
T ss_pred HhhhccccceeeeeccCCCCCEEEEEC------CCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccc
Confidence 9999999999998 6544589999993 35899999999999999996543323445667888754322 2
Q ss_pred CCcEEEEEEEEeCCCeEEEEEeeeeeeccchhHHHHHHHHHHHHh-ccc-ccccCCCCCCCCCCCCccccccccCCCCCc
Q 010609 166 KAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCK-QLD-IHLQNKAPSLPERLTPCFDRTLIKDPGGID 243 (506)
Q Consensus 166 ~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wA~~~r-g~~-~~~~~~~~~~~~~~~P~~dr~~l~~p~~~~ 243 (506)
+.|++.+|||+|+|||++||+++||+++||.|+.+|+++||++|| |.. . . ..++.+.|++|| .+.+|+ ++
T Consensus 146 ~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~-----~-~~~~~~~P~~dr-~l~~p~-~~ 217 (454)
T 2e1v_A 146 KIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDE-----S-FLANGTRPLYDR-IIKYPM-LD 217 (454)
T ss_dssp EEECEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCH-----H-HHHHSCCCBCCC-CCCCHH-HH
T ss_pred cCceEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCcc-----c-cCCCCCCCcccc-cCCCCC-cc
Confidence 349999999999999999999999999999999999999999999 642 0 0 001235689999 776544 32
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHH
Q 010609 244 LVYVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHV 323 (506)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~i 323 (506)
..+.+.+... . .. ..+.+.....+ .+..+++|+|++++|++||+++.+... ...++|+||+|+||+
T Consensus 218 ~~~~~~~~~~---~-~~--~~~~~~~~~~~--~~~~~~~f~f~~~~i~~LK~~a~~~~~------~~~~~St~d~l~A~l 283 (454)
T 2e1v_A 218 EAYLKRAKVE---S-FN--EDYVTQSLAGP--SDKLRATFILTRAVINQLKDRVLAQLP------TLEYVSSFTVACAYI 283 (454)
T ss_dssp HHHHHHTTCT---T-HH--HHCCCCCCCCC--CCEEEEEEEECHHHHHHHHHHHHHHCT------TCSCCCHHHHHHHHH
T ss_pred hHHHHhhhcc---c-cc--cccCcccCCCC--CCceEEEEEECHHHHHHHHHHHhhcCC------CCCcccHHHHHHHHH
Confidence 2222222110 0 00 00000000012 467799999999999999999986532 125899999999999
Q ss_pred HHHhhhcccCCCCCeEEEEEEecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhccc----c
Q 010609 324 YACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGLR----G 398 (506)
Q Consensus 324 W~~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~~----~ 398 (506)
|+|++||| +++.+.+.++||+|+|++||+|++||||++.. +.+.++++||.++++|+++ .+||+++++++ +
T Consensus 284 Wr~~~~Ar---~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~-~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~ 359 (454)
T 2e1v_A 284 WSCIAKSR---NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGG-CAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKD 359 (454)
T ss_dssp HHHHHHHH---CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEE-EEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhc---CCCceEEEEEecchhccCCCCCcccccceeee-EEeecchhhccccccHHHHHHHHHHHHHhhhhhhhH
Confidence 99999999 67899999999999999999999999999999 9999999999843689999 99999999996 6
Q ss_pred ccccc-hHHHHHHHHHHhhccCCccceEEEecCCCCCccccccCCCccceeeeeeecCCceEEEeecCCC-CeEEEEEEe
Q 010609 399 DAIVG-SEDKIVRKYEMLKQMGEQSIVLRISGSHRFDVYGPDFGWGKPKKVEPVSIDRRGAICLVENKDG-GGVEVAVVL 476 (506)
Q Consensus 399 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~~-gg~ev~v~L 476 (506)
+++++ ..+ |++..+.+. ....+.||||.++++|++|||||||+++++...+.+|.++|+|++++ ||++|.|+|
T Consensus 360 ~~~~~~~~~-~~~~~~~~~----~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L 434 (454)
T 2e1v_A 360 GVLKDDMES-FNDLVSEGM----PTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCI 434 (454)
T ss_dssp TCCCC------CHHHHHCC----CSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEE
T ss_pred HHHHHHHHH-HHHHHHhhc----CCceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEE
Confidence 77787 777 877543321 12589999999999999999999999999876667899999998876 899999999
Q ss_pred CHHHHHHHHHHHHhcccce
Q 010609 477 EKQKMEVFSSLFIDGLNDE 495 (506)
Q Consensus 477 ~~~~m~~l~~~~~~~~~~~ 495 (506)
++++|++|+++|.++|+++
T Consensus 435 ~~~~m~~f~~~~~~~~~~~ 453 (454)
T 2e1v_A 435 SATQMEDFVHIFDDGLKAY 453 (454)
T ss_dssp EHHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988754
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=4e-72 Score=585.39 Aligned_cols=409 Identities=20% Similarity=0.298 Sum_probs=329.5
Q ss_pred CCceEEEEeEeecCCCCCCcccccccccccccceeeecCchhccccccCcccEEEEEecCCCCCCchhhhHHHHHHHHHH
Q 010609 11 NNRVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLS 90 (506)
Q Consensus 11 ~~~v~~~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs 90 (506)
.|+|++.++++|+|+.|++. ..+.++||.||++... .|++.+|||+.++ ......+..+++||+||+
T Consensus 2 ~m~v~v~~~~~V~P~~ptp~-----------~~~~~~LS~lD~~~~~-~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs 68 (421)
T 2bgh_A 2 APQMEKVSEELILPSSPTPQ-----------SLKCYKISHLDQLLLT-CHIPFILFYPNPL-DSNLDPAQTSQHLKQSLS 68 (421)
T ss_dssp --CEEEEEEEEEECSSCCCT-----------TSCCCBCCHHHHTSCS-SEEEEEEEECCCS-SCCCCHHHHHHHHHHHHH
T ss_pred CceEEEeeeEEEeCCCCCCC-----------CCcccCCChHHhcccc-cccceEEEEeCCC-ccccchhhHHHHHHHHHH
Confidence 47899999999999988872 2568999999997544 6999999998754 311003468999999999
Q ss_pred HHhhhhccCCceeecCCCCCCCEEEEeCCCCCCCCCceEEEEEEecCChhhhccCCCcCccccCCCCCCCCCC-----CC
Q 010609 91 LTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTS-----DD 165 (506)
Q Consensus 91 ~~L~~~p~LaGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~-----~~ 165 (506)
++|++||||||||+ ++++|+| +++||.|++++++++++++....| +...+..|+|..... ..
T Consensus 69 ~~L~~~~plAGRl~-----~~~~i~c-------~~~Gv~fv~A~~d~~l~~~~~~~p-~~~~~~~l~p~~~~~~~~~~~~ 135 (421)
T 2bgh_A 69 KVLTHFYPLAGRIN-----VNSSVDC-------NDSGVPFVEARVQAQLSQAIQNVV-ELEKLDQYLPSAAYPGGKIEVN 135 (421)
T ss_dssp HHTTTSGGGGSEEE-----TTTEEEC-------CCCCEEEEEEEESSCHHHHHSCCS-SGGGGGGGSSSCSSSSSSSCCC
T ss_pred HHhhhcchhccccC-----CCcEEEE-------cCCceEEEEEEEcCCHHHHhccCC-ChHHHHhcCCCCCCcccccccc
Confidence 99999999999997 2699999 578999999999999999965323 223456677754211 34
Q ss_pred CCcEEEEEEEEeCCCeEEEEEeeeeeeccchhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCcccc-ccccCC-CCCc
Q 010609 166 KAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDR-TLIKDP-GGID 243 (506)
Q Consensus 166 ~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~~~~P~~dr-~~l~~p-~~~~ 243 (506)
+.|++.+|||+|+|||++||+++||+++||.|+.+|+++||++|||... + ..|++|| +.+..+ ....
T Consensus 136 ~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~---------~--~~P~~dr~~~l~p~~~~~~ 204 (421)
T 2bgh_A 136 EDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETE---------I--VLPNFDLAARHFPPVDNTP 204 (421)
T ss_dssp TTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSC---------C--CCCBCSHHHHHSCCCTTCC
T ss_pred CCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCC---------C--CCCccccccccCCCcccCC
Confidence 6899999999999999999999999999999999999999999998541 1 4688998 655322 1110
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHH
Q 010609 244 LVYVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHV 323 (506)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~i 323 (506)
. ++ +..+ .++.+++|+|++++|++||+++.+.. ...++|+||+|+||+
T Consensus 205 -----------~----------~~--~~~~--~~~~~~~f~f~~~~i~~LK~~a~~~~-------~~~~~St~d~l~A~i 252 (421)
T 2bgh_A 205 -----------S----------PE--LVPD--ENVVMKRFVFDKEKIGALRAQASSAS-------EEKNFSRVQLVVAYI 252 (421)
T ss_dssp -----------C----------CC--CCCC--SSEEEEEEEECHHHHHHHHHHTC------------CCCCHHHHHHHHH
T ss_pred -----------C----------Cc--cCCc--cceEEEEEEECHHHHHHHHHHhhccC-------CCCCCchhHhHHHHH
Confidence 0 00 1112 57889999999999999999987543 225799999999999
Q ss_pred HHHhhhcccCC--CCCeEEEEEEecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhcccccc
Q 010609 324 YACMVKAITED--ANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGLRGDA 400 (506)
Q Consensus 324 W~~~~rAr~~~--~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~~~~~ 400 (506)
|+|++|||... +++++.+.++||+|+|++||+|++||||++.. +.+.+++++ + .+|+++ .+||++++++++++
T Consensus 253 W~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~-~~~~~~~~~--~-~~l~~~a~~ir~ai~~~~~~~ 328 (421)
T 2bgh_A 253 WKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATL-LFAAVDAEW--D-KDFPDLIGPLRTSLEKTEDDH 328 (421)
T ss_dssp HHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEE-EEEEECTTC--C-CCGGGGHHHHHHHTCCCSSCH
T ss_pred HHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEE-EEEEecccc--c-ccHHHHHHHHHHHHHHHHHHH
Confidence 99999998753 56789999999999999999999999999999 998888876 3 789999 99999999999888
Q ss_pred ccchHHHHHHHHHHhhccCCccceEEEecCCCCCccccccCCCccceeeeeeecCCceEEEeecCCCCeEEEEEEeCHHH
Q 010609 401 IVGSEDKIVRKYEMLKQMGEQSIVLRISGSHRFDVYGPDFGWGKPKKVEPVSIDRRGAICLVENKDGGGVEVAVVLEKQK 480 (506)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~~gg~ev~v~L~~~~ 480 (506)
++...+ +.+..... . ....+.+|||.++++|++|||||+|.++++...+.+|+++++|+++++|++|.|+|++++
T Consensus 329 ~~~~~~-~~~~~~~~--~--~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~~gi~v~v~L~~~~ 403 (421)
T 2bgh_A 329 NHELLK-GMTCLYEL--E--PQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDE 403 (421)
T ss_dssp HHHHHH-HHHHHHTS--C--GGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTSSSEEEEEEEEHHH
T ss_pred HHHHHH-HHHHhhcc--C--CCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCCCeEEEEEEcCHHH
Confidence 887766 65432211 1 125799999999999999999999999998776678999999998777899999999999
Q ss_pred HHHHHHHHHhcccceeeccCCCC
Q 010609 481 MEVFSSLFIDGLNDEHIISGVPK 503 (506)
Q Consensus 481 m~~l~~~~~~~~~~~~~~~~~~~ 503 (506)
|++|++++.+ +++.+|+
T Consensus 404 m~~f~~e~~~------~~~~~~~ 420 (421)
T 2bgh_A 404 MAMLPVELLS------LVDSDFS 420 (421)
T ss_dssp HHHSCHHHHT------TBCCCCC
T ss_pred HHHHHHHHHH------hhcCCCC
Confidence 9999986654 5666665
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=9.1e-62 Score=512.04 Aligned_cols=397 Identities=14% Similarity=0.155 Sum_probs=299.0
Q ss_pred eecCchhccc--cccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCC----CCCCCEEEEeCC
Q 010609 46 LSLTYFDTYW--IRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPP----HAEKPAVCYSFP 119 (506)
Q Consensus 46 ~~LS~lD~~~--~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~----~~g~~~I~~~~p 119 (506)
++||.|||+. ++ .|++.+|||+.++ ..+ .++.+++||+||+++|++||||||||+.++ ++|+++|+|
T Consensus 5 ~~Ls~lD~~~~~~~-~y~~~~~~y~~~~-~~~--~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~--- 77 (451)
T 2rkv_A 5 IQLDTLGQLPGLLS-IYTQISLLYPVSD-SSQ--YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVP--- 77 (451)
T ss_dssp EECCGGGGCTTGGG-CEEEEEEEEECSC-GGG--HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEEC---
T ss_pred ccCChhhcCccccc-cceeEEEEEECCC-CCC--HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEee---
Confidence 6999999985 34 5999999999644 211 356899999999999999999999998754 248899997
Q ss_pred CCCCCCCceEEEEEEecC-----Chhhhcc-CCCcCccccCCCCCC--CCC-----CCCCCcEEEEEEEEeCCCeEEEEE
Q 010609 120 HNYPKNDGVSVTVAESNA-----DFDLLAG-NGIRKAVEFYPLVPR--LST-----SDDKAEVIAIQITLFPNHGFSICI 186 (506)
Q Consensus 120 ~~~~~~~gv~f~~a~~~~-----~~~~l~~-~~p~~~~~~~~l~P~--~~~-----~~~~~Pll~vQvt~f~~GG~~L~~ 186 (506)
.+.++.|++++++. ++++|.. +.|....+...+.|. .+. ...+.|++.+|||+| |||++||+
T Consensus 78 ----~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~ 152 (451)
T 2rkv_A 78 ----FEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTV 152 (451)
T ss_dssp ----CCSSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEE
T ss_pred ----cCCCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeee
Confidence 34566688888764 6888753 444221111112221 111 223589999999988 99999999
Q ss_pred eeeeeeccchhHHHHHHHHHHHHhcccccccCCCCCCCC--CCCCccccccccC-----CCCCcHHHHHhhhhccCCCCC
Q 010609 187 SINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPE--RLTPCFDRTLIKD-----PGGIDLVYVKHNMAFAGLDPN 259 (506)
Q Consensus 187 ~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~--~~~P~~dr~~l~~-----p~~~~~~~~~~~~~~~~~~~~ 259 (506)
++||+++||.|+.+|+++||++|||.. +++ ...|++||+.+.. ++..... +..+..
T Consensus 153 ~~~H~v~Dg~g~~~Fl~awa~~~rg~~---------~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~-~~~~~~------- 215 (451)
T 2rkv_A 153 NGQHGAMDMVGQDAVIRLLSKACRNDP---------FTEEEMTAMNLDRKTIVPYLENYTIGPEVD-HQIVKA------- 215 (451)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHHTCC---------CCHHHHHHTTCCSTTSSCCCTTCCCCGGGT-TCBCCT-------
T ss_pred eehhccccHHHHHHHHHHHHHHhcCCC---------CCccccccccCchhhccccccccCCCcccc-ccccCC-------
Confidence 999999999999999999999999843 121 1247888874431 1111000 000100
Q ss_pred CCCCCCCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhcc-c-CCCCC
Q 010609 260 TRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAI-T-EDANT 337 (506)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr-~-~~~~~ 337 (506)
.. ..... ... ..++.+++|+|++++|++||+++.+... ....++|+||+|+||+|+|++||| . .++++
T Consensus 216 ~~--~~~~~-~~~--~~~~~~~~f~f~~~~i~~LK~~a~~~~~-----~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~ 285 (451)
T 2rkv_A 216 DV--AGGDA-VLT--PVSASWAFFTFSPKAMSELKDAATKTLD-----ASTKFVSTDDALSAFIWKSASRVRLERIDGSA 285 (451)
T ss_dssp TS--CC----------CCEEEEEEEECHHHHHHHHHHHHTTCC-----TTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CC--CCCCC-CCC--CCCceEEEEEECHHHHHHHHHHHhhhcc-----CCCCCccHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 00 00000 111 2467899999999999999999986542 113679999999999999999998 3 56788
Q ss_pred eEEEEEEecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhcccccc-ccchHHHHHHHHHHh
Q 010609 338 TVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGLRGDA-IVGSEDKIVRKYEML 415 (506)
Q Consensus 338 ~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~~~~~-~~~~~~~~~~~~~~~ 415 (506)
.+.+.++||+|+|++ +|++||||++.. +.+.++++||.+ .+|+++ .+||+++++++.++ +++.++ |++..++.
T Consensus 286 ~~~l~~~vd~R~rl~--lP~~y~GN~~~~-~~~~~~~~el~~-~~L~~~a~~ir~ai~~~~~~~~~~~~~~-~~~~~~~~ 360 (451)
T 2rkv_A 286 PTEFCRAVDARPAMG--VSNNYPGLLQNM-TYHNSTIGEIAN-ESLGATASRLRSELDPASMRQRTRGLAT-YLHNNPDK 360 (451)
T ss_dssp EEEEEEEEECHHHHT--CCTTCCSCCEEE-EEEEEEHHHHHH-SCHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHCSCC
T ss_pred ceEEEEEecccccCC--CCCCCcccceee-ecccCcHHHhcc-chHHHHHHHHHHHhcccCchhHHHHHHH-HHhcCCCc
Confidence 999999999999998 899999999999 999999999987 899999 99999999998887 999999 98763321
Q ss_pred h---c-c-CCccceEEEecCCCCCccccccC--CCccceeeeeee-cCCceEEEeecCCCCeEEEEEEeCHHHHHHHHH
Q 010609 416 K---Q-M-GEQSIVLRISGSHRFDVYGPDFG--WGKPKKVEPVSI-DRRGAICLVENKDGGGVEVAVVLEKQKMEVFSS 486 (506)
Q Consensus 416 ~---~-~-~~~~~~~~vssw~~~~~y~~DFG--~G~P~~v~~~~~-~~~g~v~i~p~~~~gg~ev~v~L~~~~m~~l~~ 486 (506)
. . . ...+.++++|||+++++|++||| ||+|.+++.+.. ..+|+++++|+..+||++|.|+|++++|++|++
T Consensus 361 ~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~ 439 (451)
T 2rkv_A 361 SNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKA 439 (451)
T ss_dssp TTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHH
T ss_pred cccccccccCCCCCEEEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhc
Confidence 1 0 1 11235799999999999999998 899999986543 367889998865558999999999999999986
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.79 E-value=8.7e-07 Score=90.93 Aligned_cols=292 Identities=13% Similarity=0.118 Sum_probs=160.1
Q ss_pred ceeeecCchhccccccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEEeCCCCC
Q 010609 43 FATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNY 122 (506)
Q Consensus 43 ~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~~~p~~~ 122 (506)
...+|||++.+.+....| ...+.|+..+ .. ..+.|++++.+++..+|.|-.++...++ +.+.+..
T Consensus 5 ~~~~pls~~Q~~~~~~~y-~~~~~~~l~g-~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~-~~~q~v~------ 69 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEV-FTSMTIQLRG-VI------DVDALSDAFDALLETHPVLASHLEQSSD-GGWNLVA------ 69 (422)
T ss_dssp SEEEECCHHHHHHHHTTC-EEEEEEEEES-CC------CHHHHHHHHHHHHHHCGGGSEEEEECTT-SSEEEEE------
T ss_pred ceeecCCHHHHHHHhcCc-eEEEEEEEec-CC------CHHHHHHHHHHHHHhCccceEEEEecCC-cceeeec------
Confidence 567999999885432222 2344555554 33 3789999999999999999999986543 3344433
Q ss_pred CCCCceE-EEEEEecCChhhhccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCCeEEEEEeeeeeeccchhHHHH
Q 010609 123 PKNDGVS-VTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLF 201 (506)
Q Consensus 123 ~~~~gv~-f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~f 201 (506)
....+. +.+.+ +.+.... ..+..- ..+.. ...|++++.+.. ..++..|.+.+||.++||.|+..|
T Consensus 70 -~~~~~~~~~~~d----~~~~~~~-----~~~~~~--~~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l 135 (422)
T 1q9j_A 70 -DDLLHSGICVID----GTAATNG-----SPSGNA--ELRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVL 135 (422)
T ss_dssp -CCSSSCCCEEEC---------------------C--CCCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHH
T ss_pred -cCCCCCceEEEE----CCCCCcc-----hhhhcc--cCccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHH
Confidence 111111 22111 1000000 000000 01222 577999888887 678899999999999999999999
Q ss_pred HHHHHHHHhc----ccccccCCCCCCCCCCCCccc--cccccCC-------CCCcHHHHHhhhh--ccCCCCCCCCCCCC
Q 010609 202 MKSWAYLCKQ----LDIHLQNKAPSLPERLTPCFD--RTLIKDP-------GGIDLVYVKHNMA--FAGLDPNTRNLKPN 266 (506)
Q Consensus 202 l~~wA~~~rg----~~~~~~~~~~~~~~~~~P~~d--r~~l~~p-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 266 (506)
++.|.+.+++ +. ...+++ .+..+ ....... ..... ....|+. ++. ...++
T Consensus 136 ~~~l~~~Y~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~W~~~l~~------~~~lp 200 (422)
T 1q9j_A 136 VDELFSRYTDAVTTGD------PGPITP--QPTPLSMEAVLAQRGIRKQGLSGAER-FMSVMYAYEIPA------TETPA 200 (422)
T ss_dssp HHHHHHHHHHHHHSSS------CCCCCC--CCCCBCHHHHHHHSSCCC-----CTT-SSTTTTCC---------------
T ss_pred HHHHHHHHHHhhccCC------CCCCCC--CCCCCCHHHHHHhcCCcccccchhhh-hhhhhhcccCCC------cccCC
Confidence 9999999874 22 011111 12111 1100000 00000 0011111 000 00111
Q ss_pred CCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhcccCCCCCeEEEEEEec
Q 010609 267 PVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNAD 346 (506)
Q Consensus 267 ~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~~~~~~~~~l~~~vd 346 (506)
.. ...+.........+.++++..++|++.|.+ ..+|.++++.|.+-..+.|-+. .......+.++++
T Consensus 201 ~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~-----------~~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~ 267 (422)
T 1q9j_A 201 VL-AHPGLPQAVPVTRLWLSKQQTSDLMAFGRE-----------HRLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVD 267 (422)
T ss_dssp -----CCSBCCCCEEEECCCHHHHHHHHHHHTT-----------TTCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEE
T ss_pred CC-CCCCCCCCccceEEEeCHHHHHHHHHHHHH-----------hCCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeee
Confidence 00 001111234568889999999999988764 3588999999987666665421 2456788999999
Q ss_pred CCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhc
Q 010609 347 CRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKG 395 (506)
Q Consensus 347 ~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~ 395 (506)
.|....|+++..=+.|.+.+ ....+++.. ..++..+ ..+++.+.+
T Consensus 268 ~R~~~~~~~~~~~~~~~vG~-f~n~lp~~~---~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 268 LRFVLAPPVAPTEATNLLGA-ASYLAEIGP---NTDIVDLASDIVATLRA 313 (422)
T ss_dssp TTTTSSSCCCTTTBSCCEEE-EEEEECCCS---SCCHHHHHHHHHHHHHH
T ss_pred cccccCCCCChhhhhhhhee-eeeeeeccC---CCCHHHHHHHHHHHHHH
Confidence 99987665542223454444 333333321 1345555 666665544
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.54 E-value=6.1e-05 Score=77.52 Aligned_cols=269 Identities=13% Similarity=0.039 Sum_probs=149.8
Q ss_pred EEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEEeCCCCCCCCCceEEEEEEec-C-C---
Q 010609 64 LLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESN-A-D--- 138 (506)
Q Consensus 64 ~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~-~-~--- 138 (506)
.+.|+..+ .. ..+.|++++.+++..++.|--++...+ | .|.. ...+.+.+.+.. . .
T Consensus 24 ~~~~~l~g-~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~--~--~v~~--------~~~~~~~~~d~~~~~~~~~ 84 (436)
T 1l5a_A 24 AHSLRLTG-PL------DTTLLLRALHLTVSEIDLFRARFSAQG--E--LYWH--------PFSPPIDYQDLSIHLEAEP 84 (436)
T ss_dssp EEEEEEES-SC------CHHHHHHHHHHHHHTCGGGGEEECTTC--C--EEEC--------SSCCCCEEEECTTCTTHHH
T ss_pred eEEEEEeC-CC------CHHHHHHHHHHHHHHhheeEEEEEecC--C--eECC--------CcCCCccEEeCCCCCCHHH
Confidence 34555554 33 378999999999999999998887532 4 3332 222233322211 0 0
Q ss_pred -hhhhccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCCeEEEEEeeeeeeccchhHHHHHHHHHHHHhccccccc
Q 010609 139 -FDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQ 217 (506)
Q Consensus 139 -~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~ 217 (506)
+.++... ... .+......|++++.+.....+...|.+.+||.++||.|+..|++.+.+.+++...
T Consensus 85 ~~~~~~~~------~~~-----~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~--- 150 (436)
T 1l5a_A 85 LAWRQIEQ------DLQ-----RSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLS--- 150 (436)
T ss_dssp HHHHHHHH------HHT-----SCCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHH------Hhc-----CCCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhc---
Confidence 1111100 000 0111235688888887776788999999999999999999999999999875210
Q ss_pred CCCCCCCCCCCCccc-----cccccCCC-CCcHHHHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceeEEEEeCHHHHH
Q 010609 218 NKAPSLPERLTPCFD-----RTLIKDPG-GIDLVYVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLN 291 (506)
Q Consensus 218 ~~~~~~~~~~~P~~d-----r~~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~ 291 (506)
. . ..+....+..| +..+.... .-...++..... +... ...++. .............+.++.+..+
T Consensus 151 g-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~--~~~~---~~~lp~--~~~~~~~~~~~~~~~l~~~~~~ 221 (436)
T 1l5a_A 151 G-Q-TPTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGYLR--EAPD---LTLTSA--TYDPQLSHAVSLSYTLNSQLNH 221 (436)
T ss_dssp T-C-CCCCCCCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHH--TSCC---CCBCCT--TCCGGGCCEEEEEEECCHHHHH
T ss_pred C-C-CCCCCccCHHHHHHHHHHhhccHhHHHHHHHHHHHhc--CCCC---cccCCC--CCCCCcccceeeEEecCHHHHH
Confidence 0 0 11111111111 01111110 001123322211 1100 001111 1111012345788999999999
Q ss_pred HHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhcccCCCCCeEEEEEEecCCCcCCCCCCCCCcccceeceeeeE
Q 010609 292 KLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVV 371 (506)
Q Consensus 292 ~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~ 371 (506)
+|++.|... .+|.+.++.|.+-..+.+-. . ....+.++++.|.. +--++.+|+.+.. ....
T Consensus 222 ~l~~~a~~~-----------~~t~~~~l~aa~~~~L~~~~---g-~dv~ig~~~~~R~~---~~~~~~vG~f~n~-lplr 282 (436)
T 1l5a_A 222 LLLKLANAN-----------QIGWPDALVALCALYLESAE---P-DAPWLWLPFMNRWG---SVAANVPGLMVNS-LPLL 282 (436)
T ss_dssp HHHHHHHHT-----------TCCHHHHHHHHHHHHHHHHS---T-TCCEEEEEECCCTT---SGGGGSCSCCCEE-EEEE
T ss_pred HHHHHHHHh-----------CCCHHHHHHHHHHHHHHHhh---C-CceEEeeecccCCC---hHHhcCcceEEEE-EEEE
Confidence 999988763 47889999887655554432 4 67889999999975 1234666766555 4444
Q ss_pred eeccccccccchHHH-HHHHHHHhcc
Q 010609 372 AKASDFLQGNGIDFV-EKLSDSIKGL 396 (506)
Q Consensus 372 ~~~~el~~~~~L~~~-~~Ir~~i~~~ 396 (506)
+... ...++..+ ..+++.+.+.
T Consensus 283 ~~~~---~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 283 RLSA---QQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp CCCC---TTCBHHHHHHHHHHHHHHH
T ss_pred EecC---CCCCHHHHHHHHHHHHHHH
Confidence 4332 12356666 7777766554
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.45 E-value=6e-05 Score=79.66 Aligned_cols=289 Identities=12% Similarity=0.081 Sum_probs=159.3
Q ss_pred ceeeecCchhccc-c-------ccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEE
Q 010609 43 FATLSLTYFDTYW-I-------RFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAV 114 (506)
Q Consensus 43 ~~~~~LS~lD~~~-~-------~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I 114 (506)
...+|||..-+.+ . ...|. ..+.|+..+ .. ..+.|++++.+++..++.|--++...+ |...-
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~-~~~~~~l~g-~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~--~~~~q 163 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYN-MPSTMLIEG-KL------ERTRVEAAFQRLIARHESLRTSFAVVN--GEPVQ 163 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTB-CCEEEEEEE-CC------CHHHHHHHHHHHHHHCGGGGEEEEEET--TEEEE
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCccc-ceEEEEECC-CC------CHHHHHHHHHHHHHHhHhheeEEEeeC--CEEEE
Confidence 4568999876532 1 01122 123444443 32 378999999999999999998887532 33322
Q ss_pred EEeCCCCCCCCCceEEEEEEecCChhhhccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCCeEEEEEeeeeeecc
Q 010609 115 CYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLD 194 (506)
Q Consensus 115 ~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~D 194 (506)
... ....+.+.+.+ .+-+++.. . ..... .+......|++++.+.....+...|.+.+||.++|
T Consensus 164 ~v~------~~~~~~~~~~~--~~~~~~~~-~---~~~~~-----~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~D 226 (520)
T 2jgp_A 164 NIH------EDVPFALAYSE--VTEEEARE-L---VSSLV-----QPFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISD 226 (520)
T ss_dssp EEC------SCCCCCCEEEE--CCHHHHHH-H---HHHTC-----CCCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCC
T ss_pred EEC------CCCCCceEEEe--CCHHHHHH-H---HHHhc-----CCCCCCCCcceeEEEEEEcCCcEEEEEEccceeec
Confidence 220 11122222222 11111110 0 00000 01112457899888888766789999999999999
Q ss_pred chhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccc-----cccccCCCCCc--HHHHHhhhhccCCCCCCCCCCCCC
Q 010609 195 GTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFD-----RTLIKDPGGID--LVYVKHNMAFAGLDPNTRNLKPNP 267 (506)
Q Consensus 195 g~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~~~~P~~d-----r~~l~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 267 (506)
|.|+..|++.+.+.+++.. +++...+..| +..... .... ..++... +.+..+ ...++.
T Consensus 227 g~S~~~l~~el~~~Y~~~~---------l~~~~~~~~d~~~~~~~~~~~-~~~~~~~~yW~~~--l~~~~~---~~~lp~ 291 (520)
T 2jgp_A 227 GVSSGILLAEWVQLYQGDV---------LPELRIQYKDFAVWQQEFSQS-AAFHKQEAYWLQT--FADDIP---VLNLPT 291 (520)
T ss_dssp HHHHHHHHHHHHHHHTTCC---------CCCCSCCHHHHHHHHHHHTTS-HHHHHHHHHHHHH--TSSCCC---CCCCCC
T ss_pred HhHHHHHHHHHHHHHccCC---------CCCCCCCHHHHHHHHHHhhcC-hhhHHHHHHHHHH--hCCCCC---cCCCCC
Confidence 9999999999999998743 2211111111 111111 0011 1122221 111100 011111
Q ss_pred CC--CCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhcccCCCCCeEEEEEEe
Q 010609 268 VD--PKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNA 345 (506)
Q Consensus 268 ~~--~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~~~~~~~~~l~~~v 345 (506)
.. +... ........+.++.+..++|++.|.+. .+|.+.++.|.+-..+.+-. ......+.+++
T Consensus 292 ~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~a~~~-----------~~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~ 356 (520)
T 2jgp_A 292 DFTRPSTQ-SFAGDQCTIGAGKALTEGLHQLAQAT-----------GTTLYMVLLAAYNVLLAKYA---GQEDIIVGTPI 356 (520)
T ss_dssp SSCCCSSC-CCBEEEEEEECCHHHHHHHHHHHHHH-----------TCCHHHHHHHHHHHHHHHHH---TCSCEEEEEEE
T ss_pred CCCCCCCC-CCCccEEEEeCCHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHhc---CCCCeEEEecc
Confidence 00 1111 12345678999999999999988753 47889998887555554443 34678899999
Q ss_pred cCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhc
Q 010609 346 DCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKG 395 (506)
Q Consensus 346 d~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~ 395 (506)
+.|..- --++.+|+.+.. ....+.... ..++... ..+++.+.+
T Consensus 357 ~gR~~~---~~~~~vG~f~n~-lplr~~~~~---~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 357 TGRSHA---DLEPIVGMFVNT-LAMRNKPQR---EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp CCCCSG---GGTTCCSCCCEE-EEEEECCCT---TSBHHHHHHHHHHHHHH
T ss_pred CCCCch---hhhccEEeeeee-eeEEecCCC---CCCHHHHHHHHHHHHHH
Confidence 999752 234666776655 444443321 2356655 666666554
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.25 E-value=6.4e-05 Score=78.88 Aligned_cols=291 Identities=7% Similarity=-0.079 Sum_probs=158.9
Q ss_pred cceeeecCchhcccc------ccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEE
Q 010609 42 AFATLSLTYFDTYWI------RFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVC 115 (506)
Q Consensus 42 ~~~~~~LS~lD~~~~------~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~ 115 (506)
....+|||+.-+.+. +.......+.|+.++ .. ..++|++++.+++..++.|--++...+ |... .
T Consensus 10 ~~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g-~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~--~~~~-~ 79 (493)
T 4hvm_A 10 RPGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSG-RI------DDDRLAAAADEVLDAFPLLRVNFVDDD--GLWM-R 79 (493)
T ss_dssp --CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEES-SC------CHHHHHHHHHHHHHHCGGGGEEEEESS--SEEE-E
T ss_pred CCCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeC-CC------CHHHHHHHHHHHHHhchhceeEEEccC--CEEE-E
Confidence 356789998765321 101123345566654 33 378999999999999999999887643 4444 4
Q ss_pred EeCCCCCCCCCceEEEEEEecC-Ch--hhhccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCCeEEEEEeeeeee
Q 010609 116 YSFPHNYPKNDGVSVTVAESNA-DF--DLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAV 192 (506)
Q Consensus 116 ~~~p~~~~~~~gv~f~~a~~~~-~~--~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v 192 (506)
. .... +.+.+.+... +- +++.... ..... .+..-...|++++.+.....+...|.+.+||.+
T Consensus 80 v------~~~~-~~~~~~d~~~~~~~~~~~~~~~---~~~~~-----~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i 144 (493)
T 4hvm_A 80 T------RENA-DALVRSDLRGHPDPQARCVELL---RADRD-----RPTDPERDPLVRLHLVRLSETDVVLGVVAHQML 144 (493)
T ss_dssp E------CSCC-CCEEEEECTTSSSHHHHHHHHH---HHHHS-----SCCCTTTSCSEEEEEEECSSSEEEEEEEEETTT
T ss_pred e------cCCC-CCceEEECCCCCchHHHHHHHH---HHHhc-----CCCCCCCCCeEEEEEEEECCCcEEEEEecchhh
Confidence 4 1223 4454433211 00 1111000 00000 011124569999888888667789999999999
Q ss_pred ccchhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccc-----cc--cccCCC-CCcHHHHHhhhhccCCCCCCCCCC
Q 010609 193 LDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFD-----RT--LIKDPG-GIDLVYVKHNMAFAGLDPNTRNLK 264 (506)
Q Consensus 193 ~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~~~~P~~d-----r~--~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (506)
+||.|+..|++.+.+.+.|.. ++ .+..| +. .+..+. .-...++..... +... +
T Consensus 145 ~Dg~S~~~l~~~l~~~Y~g~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~--~~~~----l- 205 (493)
T 4hvm_A 145 LDARSRYMVLGAVWQAYYGRF----------RP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLP--ALPV----R- 205 (493)
T ss_dssp CCHHHHHHHHHHHHHHHTTCC----------CG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGG--GSCC----C-
T ss_pred ccHHHHHHHHHHHHHHhCCCC----------CC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhcc--CCCC----C-
Confidence 999999999999999996532 11 12111 11 111000 001122322211 1100 0
Q ss_pred CCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCc--HHHHHHHHHHHHhhhcccC--------C
Q 010609 265 PNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLS--SYVLTCAHVYACMVKAITE--------D 334 (506)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~S--t~d~L~A~iW~~~~rAr~~--------~ 334 (506)
.. ...+. .......+.++.+..++|++.|.+ ..+| .+.++.|.+-..+.+-+.- .
T Consensus 206 -~~--~~~~~-~~~~~~~~~l~~~~~~~l~~~a~~-----------~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~ 270 (493)
T 4hvm_A 206 -GG--DGGPV-GPPETSRLRVPGSRWQALTEPGGP-----------LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGT 270 (493)
T ss_dssp -C----------CCEEEEEEEEHHHHHHHHCC-----------------CHHHHHHHHHHHHHHHC--------------
T ss_pred -CC--CCCCC-CCCeeEEEEcCHHHHHHHHHHHHH-----------cCCCchHHHHHHHHHHHHHHHhhhcccccccCcC
Confidence 11 11111 226678899999999999887765 3477 8999999766666554110 2
Q ss_pred CCCeEEEEEEecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhcc
Q 010609 335 ANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGL 396 (506)
Q Consensus 335 ~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~ 396 (506)
......+.++++.|.. +--++.+|+++.. ....+......+ .++..+ ..+++.+.+.
T Consensus 271 g~~dv~~g~~~~gR~~---~~~~~~vG~f~n~-lplr~~~~~~~~-~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 271 GKDSLYLSTEVDLRDH---LQLGSVVGPLTDR-VVFGVDLTGLRE-PSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp --CEEEEEEEEEHHHH---TTCCSBCSCCEEE-EEEEEECTTCSS-CBHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeeccCCCC---cchhcCeEeeece-eEEEEecCCCcC-CCHHHHHHHHHHHHHHH
Confidence 4567899999999966 2345677777655 555554433212 456666 6666665554
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.10 E-value=0.00088 Score=69.33 Aligned_cols=303 Identities=12% Similarity=0.079 Sum_probs=163.5
Q ss_pred ceeeecCchhcccc------ccCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEE
Q 010609 43 FATLSLTYFDTYWI------RFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (506)
Q Consensus 43 ~~~~~LS~lD~~~~------~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~ 116 (506)
...++||+..+ |. ........+.|+.++ .. ..+.|+++|.+++..++.|--++...+ |.+.-..
T Consensus 15 ~~~~pls~~Q~-~~~~~~~~~~~~y~~~~~~~l~g-~l------d~~~L~~Al~~lv~rh~~LRt~f~~~~--~~~~q~v 84 (466)
T 2xhg_A 15 AGNVPLTPIQK-WFFGKNFTNTGHWNQSSVLYRPE-GF------DPKVIQSVMDKIIEHHDALRMVYQHEN--GNVVQHN 84 (466)
T ss_dssp CEECCCCHHHH-HHHHTTCTTTTCBEEEEEEEETT-CC------CHHHHHHHHHHHHHHSGGGGEEEECGG--GCCEEEE
T ss_pred CCCCCCCHHHH-HHHhCCCCCcCcceeEEEEEcCC-CC------CHHHHHHHHHHHHHhChHhheEEecCC--Cceeeec
Confidence 56788888765 31 111123345566655 43 378999999999999999999988543 4432222
Q ss_pred eCCCCCCCCCceEEEEEEec--CChhhhccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCCeEEEEEeeeeeecc
Q 010609 117 SFPHNYPKNDGVSVTVAESN--ADFDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLD 194 (506)
Q Consensus 117 ~~p~~~~~~~gv~f~~a~~~--~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~D 194 (506)
. + .....+.+.+.+.. .+.++..... ..... .+......|++++.+.... ++-.|-+.+||.++|
T Consensus 85 ~-~---~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~-----~~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~D 151 (466)
T 2xhg_A 85 R-G---LGGQLYDFFSYNLTAQPDVQQAIEAE---TQRLH-----SSMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVD 151 (466)
T ss_dssp C-C---SSSCCCEEEEEECTTCSCHHHHHHHH---HHHHH-----TTCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCC
T ss_pred c-c---cccccceeEEEecCCcccHHHHHHHH---HHHHH-----hccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeec
Confidence 1 0 01123344433321 1111110000 00000 0112246789998888884 444477999999999
Q ss_pred chhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccc-----cccccCCC-CCcHHHHHhhhh-ccCCCCCCCCCCCCC
Q 010609 195 GTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFD-----RTLIKDPG-GIDLVYVKHNMA-FAGLDPNTRNLKPNP 267 (506)
Q Consensus 195 g~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~~~~P~~d-----r~~l~~p~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 267 (506)
|.|+..|++.+.+.+++... .....+++...++.| +.....+. .-...++..... ++. ..++.
T Consensus 152 g~S~~~l~~el~~~Y~~~~~---g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~-------~~lp~ 221 (466)
T 2xhg_A 152 GISWRILFEDLATGYAQALA---GQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKN-------VSLPK 221 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCC-------CCCCC
T ss_pred hhhHHHHHHHHHHHHHHHHc---CCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCc-------ccCCc
Confidence 99999999999998875320 001112211111111 01111110 011223332211 110 01111
Q ss_pred CC--CCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhcccCCCCCeEEEEEEe
Q 010609 268 VD--PKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNA 345 (506)
Q Consensus 268 ~~--~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~~~~~~~~~l~~~v 345 (506)
.. +... ........+.++++..++|++.+... ..+|.+++|.|.+-..+.+-. ......+.+++
T Consensus 222 ~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~~~~~----------~~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~ 287 (466)
T 2xhg_A 222 DYEVTDCK-QKSVRNMRIRLHPEETEQLLKHANQA----------YQTEINDLLLAALGLAFAEWS---KLAQIVIHLEG 287 (466)
T ss_dssp SSCCSSCB-GGGEEEEEEECCHHHHHHHHHTGGGT----------TTCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEE
T ss_pred cccccccc-cccceEEEEEcCHHHHHHHHHHhHHh----------hCCCHHHHHHHHHHHHHHHHh---CCCceEEEecC
Confidence 00 1111 12345678999999999998776432 357889999887666665543 34678899999
Q ss_pred cCCCcCCC-CCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhcc
Q 010609 346 DCRSRLDP-PLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGL 396 (506)
Q Consensus 346 d~R~rl~P-plp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~ 396 (506)
+.|....+ +--.+-+|+.+.. ....+.+.. ..++..+ ..|++.+..+
T Consensus 288 ~gR~~~~~~~~~~~~vG~f~n~-lplr~~~~~---~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 288 HGREDIIEQANVARTVGWFTSQ-YPVLLDLKQ---TAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp CCCCSCSTTCCCTTCCSCCCEE-EEEEEECSC---CCSHHHHHHHHHHHHHHS
T ss_pred CCCCccccCCCccccccceeee-ccEEEecCC---CCCHHHHHHHHHHHHHhC
Confidence 99986421 1234666766555 444443322 1456666 8888877765
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.03 E-value=0.00048 Score=81.08 Aligned_cols=300 Identities=13% Similarity=0.079 Sum_probs=163.7
Q ss_pred ceeeecCchhccc-------cc-cCcccEEEEEecCCCCCCchhhhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEE
Q 010609 43 FATLSLTYFDTYW-------IR-FGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAV 114 (506)
Q Consensus 43 ~~~~~LS~lD~~~-------~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I 114 (506)
...+|||+.-+-+ +. ..|. ..+.|+..+ .. ..+.|++++.+++..++.|--++....+++-.++
T Consensus 10 ~d~~PLS~~Q~~lw~~~~~~~~~~~Y~-~~~~~~l~g-~l------d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~ 81 (1304)
T 2vsq_A 10 QDMYYLSPMQEGMLFHAILNPGQSFYL-EQITMKVKG-SL------NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQV 81 (1304)
T ss_dssp EEEEECCHHHHHHHHHHHHSTTSCTTE-EEEEEEEEE-CC------CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEE
T ss_pred CCcCCCCHHHHHHHHHHhhCCCCCceE-EEEEEEEcC-Cc------CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEE
Confidence 4568888754321 10 1122 334555554 33 3789999999999999999999886543122344
Q ss_pred EEeCCCCCCCCCceEEEEEEec-CC-------hhhhccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCCeEEEEE
Q 010609 115 CYSFPHNYPKNDGVSVTVAESN-AD-------FDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICI 186 (506)
Q Consensus 115 ~~~~p~~~~~~~gv~f~~a~~~-~~-------~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~L~~ 186 (506)
.. ....+.+.+.+.. .+ +.++... ... .+......|++++.+.....+...|-+
T Consensus 82 v~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~------~~~-----~~fdl~~~pl~r~~l~~~~~~~~~l~~ 143 (1304)
T 2vsq_A 82 VL-------KKRQFHIEEIDLTHLTGSEQTAKINEYKEQ------DKI-----RGFDLTRDIPMRAAIFKKAEESFEWVW 143 (1304)
T ss_dssp EE-------SCCCCCEEEEECTTSCHHHHHHHHHHHHHH------HHH-----HCCCTTTSCSEEEEEEEEETTEEEEEE
T ss_pred EC-------CCCCCceEEEECCCCCchhHHHHHHHHHHH------Hhc-----CCCCCCCCCcEEEEEEEECCCcEEEEE
Confidence 44 2222333333211 11 1111100 000 011124679999999888778899999
Q ss_pred eeeeeeccchhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccccc-cccCCCC-CcHHHHHhhhhccCCCCCCCCCC
Q 010609 187 SINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDRT-LIKDPGG-IDLVYVKHNMAFAGLDPNTRNLK 264 (506)
Q Consensus 187 ~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~~~~~~~~P~~dr~-~l~~p~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (506)
.+||.++||.|+..|++.+++.+++... .....+++ ..++.|-. .+..... -...+|++... +... . ..
T Consensus 144 ~~HHii~DG~S~~~l~~el~~~Y~~~~~---g~~~~l~~-~~~y~d~~~~~~~~~~~~~~~yW~~~L~--~~~~-~--~~ 214 (1304)
T 2vsq_A 144 SYHHIILDGWCFGIVVQDLFKVYNALRE---QKPYSLPP-VKPYKDYIKWLEKQDKQASLRYWREYLE--GFEG-Q--TT 214 (1304)
T ss_dssp EEEGGGCCHHHHHHHHHHHHHHHHHHHT---TCCCCCCC-CCCTHHHHHHHHTSCHHHHHHHHHHHHT--TCCC-C--CT
T ss_pred ecCceeechhhHHHHHHHHHHHHHHhhc---CCCCCCCC-cccHHHHHHHHhcchhhHHHHHHHHHhC--CCCc-c--cc
Confidence 9999999999999999999998876321 00111221 11221110 0111110 11123332211 1100 0 01
Q ss_pred CCCCCCCCcCCCCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhcccCCCCCeEEEEEE
Q 010609 265 PNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFN 344 (506)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~~~~~~~~~l~~~ 344 (506)
++................|.++++..++||+.|.+. .+|.+.+|.|.+-..+.|-- ......+.++
T Consensus 215 lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~-----------~~T~~~vllaa~a~~L~r~t---g~~dvv~G~p 280 (1304)
T 2vsq_A 215 FAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ-----------HTTLSTALQAVWSVLISRYQ---QSGDLAFGTV 280 (1304)
T ss_dssp TTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHHH---TCSEEEEEEE
T ss_pred CCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHhc---CCCCEEEEEE
Confidence 111000010012345677889999999999998763 47889988886555544432 3567899999
Q ss_pred ecCCCcCCCCCCCCCcccceeceeeeEeeccccccccchHHH-HHHHHHHhcc
Q 010609 345 ADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFV-EKLSDSIKGL 396 (506)
Q Consensus 345 vd~R~rl~Pplp~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~-~~Ir~~i~~~ 396 (506)
++.|..-.+.+ ++.+|+.+.. ....+.+. ...++..+ .++++.+.+.
T Consensus 281 vsgR~~~~~~~-~~~vG~fvnt-lplr~~~~---~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 281 VSGRPAEIKGV-EHMVGLFINV-VPRRVKLS---EGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp ECCCCTTSTTG-GGCCSSCCEE-EEEEEECC---TTCBHHHHHHHHHHHHHHH
T ss_pred eCCCCccchhh-hcccccceeE-EEEEecCC---CCCcHHHHHHHHHHHHHHh
Confidence 99997632222 4556665544 33344332 12456666 7777766543
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.76 E-value=0.002 Score=67.85 Aligned_cols=261 Identities=15% Similarity=0.130 Sum_probs=138.1
Q ss_pred hhHHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEEeCCCCCCCCCce------EEEEEEecCChhhhc---------
Q 010609 79 KVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGV------SVTVAESNADFDLLA--------- 143 (506)
Q Consensus 79 ~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~~~p~~~~~~~gv------~f~~a~~~~~~~~l~--------- 143 (506)
++..+.||.|.-.+=-++|-+|+++..+ +.+.....|..|.. .+-+ .|.+...+.+-+|+.
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d-~~~~~~~~Y~~~~~---~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~ 147 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWD-DEVPAIITYESPES---NESARDWARGCIHVQPTAKSALDLWSEMEEGRAA 147 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECC-SSSSCEEEEECCSS---HHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeC-CCCcccEEEecCCC---HHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhcc
Confidence 4567888888888778899999999987 33556666642311 1111 255555455555541
Q ss_pred -cCC-CcCccccCCCCCCCCCCCCCCcEEEEEEEEeCCC--eEEEEEeeeeeeccchhHHHHHHHHHHHHhccccc--cc
Q 010609 144 -GNG-IRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNH--GFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIH--LQ 217 (506)
Q Consensus 144 -~~~-p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~G--G~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~--~~ 217 (506)
... |.....+.-+.|. ...+.| + .+ -.-|.+.+||.++||.|+..|++.+-+........ ..
T Consensus 148 ~~~~~p~~~~~l~~v~~~---~~~~~~--------~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~ 215 (519)
T 3fot_A 148 ANDNTPSKSIELFLLSDV---STDSTP--------I-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSR 215 (519)
T ss_dssp TC-CCCCCSCEEEEEESS---SSTTSC--------C-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGG
T ss_pred cccCCCccceEEEEEecc---cccccc--------C-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCcc
Confidence 111 1111111111111 111111 3 23 46677789999999999999999998877632100 00
Q ss_pred CCCCCCC-----CCCCCccccccccCCCC-CcHH---HHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceeEEEEeCHH
Q 010609 218 NKAPSLP-----ERLTPCFDRTLIKDPGG-IDLV---YVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSE 288 (506)
Q Consensus 218 ~~~~~~~-----~~~~P~~dr~~l~~p~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~ 288 (506)
. ...+. ..+.|..+ +.+.-|.. .... ...++.. ........+.++. ..-+ ..-....+.|+++
T Consensus 216 ~-~~~~~~g~E~~~L~P~~e-~~~~~p~~~~~~e~~~~~~~~~~--~~~~~~~~~~~P~--~~~~--~~~~~~~~~ls~~ 287 (519)
T 3fot_A 216 E-MKKIQWGQEIKNLSPPVV-DSLKLDINTLGSEFDDKCTEYTS--ALVANYKSRGMKF--QPGL--ALPRCVIHKLSAD 287 (519)
T ss_dssp G-SCCCCTTTTGGGSCCCTG-GGBSSCGGGCCHHHHHHHHHHHH--HHHHHHHSCCSBC--CCCC--CCEEEEEEECCHH
T ss_pred C-CCcCCCCcccccCCcCHH-HHhCCCCCCCCHHHHHHHHHHHH--HhhcCCCcccCCC--CCCC--CCcceEEEEcCHH
Confidence 0 00000 00111111 01111111 1000 1111110 0000000111111 0011 2234578899999
Q ss_pred HHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhccc---CCCCCeEEEEEEecCCCcCCCCCCCCCccccee
Q 010609 289 DLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAIT---EDANTTVVFSFNADCRSRLDPPLPVNYFGNCVS 365 (506)
Q Consensus 289 ~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~---~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~~~ 365 (506)
+.++|++.|.+.. +..+|.+.+|.|.+-.++.+... ........+.++||+|+++.++.-.+|+|.+..
T Consensus 288 ~t~~L~~~ck~~~--------~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~ 359 (519)
T 3fot_A 288 ESIDIVKAVKTRL--------GPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQT 359 (519)
T ss_dssp HHHHHHHHHHHHT--------CTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEE
T ss_pred HHHHHHHHHHhcC--------CCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeee
Confidence 9999999999863 34689999998877666665322 112346889999999999976555678888876
Q ss_pred ceeeeEe
Q 010609 366 AAVCVVA 372 (506)
Q Consensus 366 ~~~~~~~ 372 (506)
. .....
T Consensus 360 ~-~~~~v 365 (519)
T 3fot_A 360 A-AVVRI 365 (519)
T ss_dssp E-EEEEE
T ss_pred e-eeeEe
Confidence 6 44443
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=71.38 E-value=2.5 Score=38.63 Aligned_cols=45 Identities=22% Similarity=0.397 Sum_probs=33.8
Q ss_pred CCcEEEEEEEEeCCCe--EEEEEeeeeeeccchhHHHHHHHHHHHHh
Q 010609 166 KAEVIAIQITLFPNHG--FSICISINHAVLDGTSLMLFMKSWAYLCK 210 (506)
Q Consensus 166 ~~Pll~vQvt~f~~GG--~~L~~~~~H~v~Dg~g~~~fl~~wA~~~r 210 (506)
..|++.+--..-..|. +-|++++||.++||.-+..|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 4588864322221233 78899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=69.91 E-value=2.8 Score=38.40 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=32.0
Q ss_pred CCcEEEEEEEEeCCCe--EEEEEeeeeeeccchhHHHHHHHHHHHH
Q 010609 166 KAEVIAIQITLFPNHG--FSICISINHAVLDGTSLMLFMKSWAYLC 209 (506)
Q Consensus 166 ~~Pll~vQvt~f~~GG--~~L~~~~~H~v~Dg~g~~~fl~~wA~~~ 209 (506)
..|++.+--..-..|. +-|++++||.++||.-+..|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4688754211111233 6889999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=69.72 E-value=2.9 Score=38.43 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=34.2
Q ss_pred CcEEEEEEEEeCCCe--EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 167 AEVIAIQITLFPNHG--FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 167 ~Pll~vQvt~f~~GG--~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
.|++.+--..-..|. +-|++++||.++||.-+..|++.+.+.+..
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 214 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDE 214 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHhC
Confidence 588765322222233 788999999999999999999999988764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=67.30 E-value=3.4 Score=38.49 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=27.8
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.++||.-+..|++.+.+.+..
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 889999999999999999999999988753
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=66.32 E-value=3.6 Score=38.38 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=27.7
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.++||.-+..|++.+.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=66.23 E-value=3.7 Score=38.07 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=27.5
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.++||.-+..|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999998764
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=66.11 E-value=3.2 Score=38.26 Aligned_cols=30 Identities=17% Similarity=0.373 Sum_probs=27.7
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998875
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=64.72 E-value=4 Score=38.53 Aligned_cols=30 Identities=20% Similarity=0.523 Sum_probs=27.5
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.++||.-+..|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999998763
No 21
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=61.41 E-value=5.8 Score=22.01 Aligned_cols=21 Identities=10% Similarity=0.161 Sum_probs=17.4
Q ss_pred CCCCCcHHHHHHHHHHHHhhh
Q 010609 309 KQLHLSSYVLTCAHVYACMVK 329 (506)
Q Consensus 309 ~~~~~St~d~L~A~iW~~~~r 329 (506)
.++-+++.|-|+-|+|+++..
T Consensus 4 rpsvftsqdylsdhlwralna 24 (26)
T 2xl1_A 4 RPSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CCceeecHHHHHHHHHHHHhc
Confidence 455678999999999999864
No 22
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=59.48 E-value=5.7 Score=37.32 Aligned_cols=30 Identities=27% Similarity=0.532 Sum_probs=27.8
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.+.||.-+..|++.|.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998875
No 23
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.89 E-value=6.4 Score=36.86 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=27.7
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|+++++|.+.||.-+..|++.|.+.+..
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998875
No 24
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=39.72 E-value=22 Score=25.32 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEE
Q 010609 81 VLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (506)
Q Consensus 81 ~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~ 116 (506)
.++....+|.+.+.+-..+||.+...-+++.++|+.
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleiri 46 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRI 46 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEE
Confidence 467888999999999999999998754435688887
No 25
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=39.59 E-value=6.2 Score=40.10 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=0.0
Q ss_pred EEEEEeeeeeeccchhHHHHHHHHHHHHhc
Q 010609 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (506)
Q Consensus 182 ~~L~~~~~H~v~Dg~g~~~fl~~wA~~~rg 211 (506)
+-|++++||.++||.-+..|++.|.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999988764
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=36.13 E-value=38 Score=22.64 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=20.0
Q ss_pred eeEEEEeCHHHHHHHHHHHHHhh
Q 010609 279 VRRTFELSSEDLNKLKHKLLLAK 301 (506)
Q Consensus 279 ~~~~f~fs~~~l~~Lk~~a~~~~ 301 (506)
....|+||+++-+.|++.|.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 35689999999999999998864
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=33.03 E-value=50 Score=26.55 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEE
Q 010609 81 VLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (506)
Q Consensus 81 ~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~ 116 (506)
.++.+..+|.+.+.+-..+||.+...-++++++|..
T Consensus 93 dlea~ekalkemirqarkfagtvtytl~gn~l~i~i 128 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 128 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 378899999999999999999998754446778777
No 28
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=30.08 E-value=50 Score=26.55 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhhhccCCceeecCCCCCCCEEEE
Q 010609 82 LPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (506)
Q Consensus 82 ~~~Lk~sLs~~L~~~p~LaGrl~~~~~~g~~~I~~ 116 (506)
++.+..+|.+.+.+-..+||.+...-++++++|..
T Consensus 13 lea~ekalkemirqarkfagtvtytl~gn~l~i~i 47 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 47 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 68899999999999999999998754435677777
No 29
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=27.63 E-value=74 Score=22.06 Aligned_cols=42 Identities=21% Similarity=0.126 Sum_probs=31.3
Q ss_pred CCceeEEEEeCHHHHHHHHHHHHHhhhhcccccCCCCCcHHHHHHHHHHHHhhhccc
Q 010609 276 NNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAIT 332 (506)
Q Consensus 276 ~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~~~St~d~L~A~iW~~~~rAr~ 332 (506)
...-...|+|+.++-+.|.+.|.++. |.+..+|=|.|.++..
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~---------------eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEV---------------ESVNSFVKRHILKTII 54 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTC---------------SCHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHH
Confidence 45567899999999999999998764 3345566666666654
Done!