Query 010610
Match_columns 506
No_of_seqs 247 out of 1556
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 10:30:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010610.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010610hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 4E-126 1E-130 1022.2 38.5 418 80-506 42-475 (550)
2 3khd_A Pyruvate kinase; malari 100.0 7E-125 2E-129 1007.0 32.6 403 103-506 41-450 (520)
3 3hqn_D Pyruvate kinase, PK; TI 100.0 2E-124 7E-129 1001.1 35.8 403 102-506 14-425 (499)
4 4drs_A Pyruvate kinase; glycol 100.0 2E-123 6E-128 1000.1 39.0 403 103-506 39-456 (526)
5 3gg8_A Pyruvate kinase; malari 100.0 2E-123 8E-128 994.5 35.8 400 106-506 34-441 (511)
6 3qtg_A Pyruvate kinase, PK; TI 100.0 2E-122 7E-127 976.0 37.4 390 105-506 12-405 (461)
7 3t05_A Pyruvate kinase, PK; te 100.0 5E-123 2E-127 1010.0 33.6 402 104-506 19-424 (606)
8 1e0t_A Pyruvate kinase, PK; ph 100.0 5E-122 2E-126 979.0 39.8 397 107-506 1-402 (470)
9 2e28_A Pyruvate kinase, PK; al 100.0 9E-121 3E-125 993.4 36.2 399 107-506 2-405 (587)
10 1a3w_A Pyruvate kinase; allost 100.0 2E-117 5E-122 951.4 28.7 415 83-506 3-426 (500)
11 1izc_A Macrophomate synthase i 99.8 2.2E-19 7.6E-24 184.8 7.5 149 279-442 107-302 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 4.3E-19 1.5E-23 176.7 -0.0 126 278-417 79-239 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 7.2E-19 2.5E-23 177.1 -0.3 128 276-417 98-260 (287)
14 3qz6_A HPCH/HPAI aldolase; str 99.7 1.1E-16 3.8E-21 159.0 11.9 127 279-418 78-239 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.7 1.7E-16 5.9E-21 156.9 10.7 128 277-418 79-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 1.5E-15 5.2E-20 152.0 9.3 136 270-414 74-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.3 1.7E-12 5.9E-17 132.8 8.3 134 271-415 117-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 2.5E-11 8.4E-16 123.8 7.7 130 275-414 113-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.1 7.9E-11 2.7E-15 117.5 8.2 124 276-414 71-208 (273)
20 2ols_A Phosphoenolpyruvate syn 99.1 7.6E-11 2.6E-15 133.3 8.4 132 274-415 622-777 (794)
21 3qqw_A Putative citrate lyase; 99.1 1E-10 3.5E-15 120.0 6.4 130 275-414 94-254 (332)
22 2hwg_A Phosphoenolpyruvate-pro 99.0 4.8E-10 1.6E-14 122.5 9.0 133 272-415 367-526 (575)
23 2wqd_A Phosphoenolpyruvate-pro 99.0 4.3E-10 1.5E-14 122.9 8.6 127 278-415 375-528 (572)
24 3r4i_A Citrate lyase; TIM beta 99.0 6.1E-10 2.1E-14 114.5 8.1 104 276-379 94-223 (339)
25 3oyz_A Malate synthase; TIM ba 98.8 9.1E-09 3.1E-13 108.5 8.8 133 275-414 94-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.4 1E-06 3.5E-11 100.5 11.7 116 289-415 701-860 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.2 3.2E-06 1.1E-10 96.5 11.4 116 289-415 695-854 (873)
28 3cuz_A MSA, malate synthase A; 97.7 0.00013 4.5E-09 79.0 11.6 132 279-415 195-366 (532)
29 3cux_A Malate synthase; TIM ba 97.5 0.00012 4.3E-09 79.1 8.0 125 287-415 202-364 (528)
30 1p7t_A MSG, malate synthase G; 97.4 0.00011 3.7E-09 81.4 5.4 132 279-415 372-536 (731)
31 1h6z_A Pyruvate phosphate diki 97.2 0.0011 3.6E-08 76.1 11.1 135 270-415 698-880 (913)
32 2x0s_A Pyruvate phosphate diki 96.1 0.031 1.1E-06 64.3 12.2 113 292-415 727-880 (913)
33 4af0_A Inosine-5'-monophosphat 95.8 0.089 3E-06 57.1 13.5 125 275-415 279-413 (556)
34 3f4w_A Putative hexulose 6 pho 95.5 0.16 5.3E-06 47.3 12.6 137 281-436 69-208 (211)
35 3ffs_A Inosine-5-monophosphate 94.9 0.13 4.3E-06 54.0 11.0 118 279-414 146-274 (400)
36 3inp_A D-ribulose-phosphate 3- 94.3 0.37 1.3E-05 47.2 12.0 141 280-436 100-244 (246)
37 3usb_A Inosine-5'-monophosphat 94.2 0.31 1.1E-05 52.4 12.2 123 277-415 256-388 (511)
38 1h1y_A D-ribulose-5-phosphate 94.0 0.89 3E-05 43.1 13.9 138 280-436 78-222 (228)
39 4fo4_A Inosine 5'-monophosphat 94.0 0.94 3.2E-05 46.8 14.9 123 277-415 108-240 (366)
40 3ovp_A Ribulose-phosphate 3-ep 94.0 0.33 1.1E-05 46.7 10.8 139 280-439 78-221 (228)
41 1jqo_A Phosphoenolpyruvate car 93.9 0.13 4.4E-06 59.3 8.9 113 283-395 519-653 (970)
42 3odm_A Pepcase, PEPC, phosphoe 93.8 0.076 2.6E-06 57.5 6.5 93 288-380 138-260 (560)
43 4fxs_A Inosine-5'-monophosphat 93.6 0.43 1.5E-05 51.0 12.1 123 276-415 230-363 (496)
44 3ctl_A D-allulose-6-phosphate 93.4 1.1 3.8E-05 43.2 13.4 139 281-436 72-218 (231)
45 3khj_A Inosine-5-monophosphate 93.3 1.1 3.7E-05 46.1 13.9 119 279-415 107-236 (361)
46 4avf_A Inosine-5'-monophosphat 92.8 0.61 2.1E-05 49.8 11.5 123 276-415 228-361 (490)
47 1tqj_A Ribulose-phosphate 3-ep 92.5 0.52 1.8E-05 45.2 9.5 138 281-434 77-220 (230)
48 2qjg_A Putative aldolase MJ040 92.4 0.68 2.3E-05 44.8 10.5 42 123-164 102-145 (273)
49 2fli_A Ribulose-phosphate 3-ep 92.4 2.3 7.9E-05 39.4 13.8 137 281-434 76-217 (220)
50 1jqn_A Pepcase, PEPC, phosphoe 92.3 0.15 5.1E-06 58.3 6.4 99 289-387 468-585 (883)
51 3r2g_A Inosine 5'-monophosphat 92.2 0.76 2.6E-05 47.5 10.9 118 277-415 100-228 (361)
52 1y0e_A Putative N-acetylmannos 92.2 1.6 5.5E-05 40.7 12.4 137 278-433 77-219 (223)
53 3igs_A N-acetylmannosamine-6-p 91.9 2.2 7.7E-05 40.9 13.3 136 278-438 90-230 (232)
54 2z6i_A Trans-2-enoyl-ACP reduc 91.8 1.1 3.7E-05 45.1 11.4 111 280-415 79-191 (332)
55 3cu2_A Ribulose-5-phosphate 3- 91.8 1.3 4.5E-05 42.9 11.6 135 279-434 82-235 (237)
56 1jcn_A Inosine monophosphate d 91.6 2.6 8.8E-05 44.9 14.7 120 278-416 256-388 (514)
57 3ajx_A 3-hexulose-6-phosphate 91.5 1.7 5.6E-05 40.1 11.5 132 282-433 70-204 (207)
58 1w8s_A FBP aldolase, fructose- 91.1 2.6 8.9E-05 41.2 13.1 69 282-353 165-238 (263)
59 1h1y_A D-ribulose-5-phosphate 91.1 2.1 7.1E-05 40.6 12.1 141 272-438 11-171 (228)
60 2c6q_A GMP reductase 2; TIM ba 90.8 2 6.9E-05 43.9 12.4 122 278-415 119-252 (351)
61 1tqx_A D-ribulose-5-phosphate 90.8 1.6 5.3E-05 42.1 10.9 131 290-436 86-222 (227)
62 3bo9_A Putative nitroalkan dio 90.2 2.3 7.8E-05 42.8 12.0 112 279-415 92-205 (326)
63 1ydn_A Hydroxymethylglutaryl-C 89.7 2.4 8.2E-05 41.8 11.5 152 274-438 23-197 (295)
64 3q58_A N-acetylmannosamine-6-p 89.1 3.1 0.00011 39.9 11.5 132 278-434 90-226 (229)
65 1eep_A Inosine 5'-monophosphat 89.0 2.6 8.8E-05 43.5 11.6 119 278-414 154-284 (404)
66 3bw2_A 2-nitropropane dioxygen 88.5 6.8 0.00023 39.7 14.2 112 279-415 112-237 (369)
67 3ble_A Citramalate synthase fr 88.4 7.9 0.00027 39.1 14.5 158 274-438 38-211 (337)
68 1vrd_A Inosine-5'-monophosphat 88.4 3.4 0.00012 43.6 12.3 121 278-415 238-369 (494)
69 1gte_A Dihydropyrimidine dehyd 88.4 3 0.0001 48.3 12.7 119 283-416 655-817 (1025)
70 1vhc_A Putative KHG/KDPG aldol 88.2 4.9 0.00017 38.5 12.1 103 280-414 33-136 (224)
71 1rpx_A Protein (ribulose-phosp 88.1 4 0.00014 38.3 11.4 137 280-433 82-225 (230)
72 1mxs_A KDPG aldolase; 2-keto-3 87.8 7.1 0.00024 37.3 13.1 117 279-435 41-161 (225)
73 3jr2_A Hexulose-6-phosphate sy 87.8 1.5 5.2E-05 41.2 8.2 138 281-436 75-214 (218)
74 1wbh_A KHG/KDPG aldolase; lyas 87.6 6.6 0.00023 37.2 12.6 104 279-414 31-135 (214)
75 4g9p_A 4-hydroxy-3-methylbut-2 87.5 2.5 8.5E-05 44.3 10.1 152 280-438 42-222 (406)
76 2gjl_A Hypothetical protein PA 87.5 4.6 0.00016 40.2 12.0 113 279-415 86-201 (328)
77 1yad_A Regulatory protein TENI 87.1 5.8 0.0002 36.9 11.8 133 282-437 81-214 (221)
78 2yw3_A 4-hydroxy-2-oxoglutarat 86.9 5.5 0.00019 37.4 11.5 102 279-414 28-130 (207)
79 1vp8_A Hypothetical protein AF 86.3 1.4 4.8E-05 41.9 6.9 46 460-505 28-74 (201)
80 1f76_A Dihydroorotate dehydrog 86.1 7.1 0.00024 38.9 12.5 116 288-415 164-318 (336)
81 3qja_A IGPS, indole-3-glycerol 85.8 9.9 0.00034 37.4 13.1 131 279-433 125-260 (272)
82 1ypf_A GMP reductase; GUAC, pu 85.1 5.8 0.0002 39.9 11.3 121 276-415 105-239 (336)
83 1rpx_A Protein (ribulose-phosp 84.7 6.3 0.00022 36.9 10.8 112 279-415 26-147 (230)
84 1xi3_A Thiamine phosphate pyro 84.6 7.3 0.00025 35.6 10.9 131 282-437 79-212 (215)
85 1q6o_A Humps, 3-keto-L-gulonat 84.0 9.8 0.00033 35.4 11.7 136 284-436 75-212 (216)
86 1w8s_A FBP aldolase, fructose- 83.9 9.2 0.00031 37.2 11.8 127 275-415 39-179 (263)
87 1me8_A Inosine-5'-monophosphat 83.4 11 0.00038 40.0 13.2 121 279-415 244-381 (503)
88 2v82_A 2-dehydro-3-deoxy-6-pho 83.4 10 0.00035 34.9 11.4 128 280-439 71-204 (212)
89 1t57_A Conserved protein MTH16 83.2 2.1 7.3E-05 40.8 6.6 45 460-505 36-81 (206)
90 2qjg_A Putative aldolase MJ040 82.9 16 0.00055 34.9 13.1 136 279-437 102-259 (273)
91 1geq_A Tryptophan synthase alp 82.8 17 0.00057 34.2 13.0 120 279-415 98-220 (248)
92 2cu0_A Inosine-5'-monophosphat 82.3 13 0.00046 39.1 13.2 119 279-416 230-358 (486)
93 1zfj_A Inosine monophosphate d 82.1 20 0.0007 37.5 14.5 122 277-415 233-365 (491)
94 1yxy_A Putative N-acetylmannos 81.7 12 0.0004 35.1 11.3 132 278-434 90-231 (234)
95 3eeg_A 2-isopropylmalate synth 81.6 28 0.00096 35.0 14.7 158 274-439 25-194 (325)
96 2tps_A Protein (thiamin phosph 81.5 17 0.0006 33.4 12.4 128 282-438 87-223 (227)
97 2qr6_A IMP dehydrogenase/GMP r 81.3 10 0.00035 38.8 11.5 113 282-415 171-306 (393)
98 1jub_A Dihydroorotate dehydrog 80.7 15 0.0005 36.1 12.1 142 281-441 111-292 (311)
99 1ka9_F Imidazole glycerol phos 80.4 11 0.00037 35.5 10.7 133 278-431 86-242 (252)
100 2ftp_A Hydroxymethylglutaryl-C 80.4 12 0.0004 37.1 11.3 157 274-438 27-201 (302)
101 1at0_A 17-hedgehog; developmen 80.2 4.6 0.00016 35.9 7.5 62 188-255 58-133 (145)
102 3nvt_A 3-deoxy-D-arabino-heptu 80.0 9.8 0.00033 39.5 10.9 111 281-415 161-283 (385)
103 3daq_A DHDPS, dihydrodipicolin 79.6 10 0.00035 37.4 10.5 96 281-380 28-134 (292)
104 4e38_A Keto-hydroxyglutarate-a 78.8 7.6 0.00026 37.6 9.1 37 364-414 117-153 (232)
105 2wqp_A Polysialic acid capsule 78.7 24 0.00081 36.2 13.1 120 279-425 38-188 (349)
106 1vzw_A Phosphoribosyl isomeras 78.7 3.6 0.00012 38.8 6.6 128 278-423 33-174 (244)
107 1zco_A 2-dehydro-3-deoxyphosph 78.7 26 0.0009 34.1 13.0 124 280-427 41-178 (262)
108 3vnd_A TSA, tryptophan synthas 78.5 6.6 0.00022 38.7 8.6 91 279-379 35-153 (267)
109 3tsm_A IGPS, indole-3-glycerol 78.4 28 0.00097 34.3 13.2 128 280-432 133-266 (272)
110 2nv1_A Pyridoxal biosynthesis 78.4 11 0.00038 37.1 10.4 121 280-431 32-167 (305)
111 3fkr_A L-2-keto-3-deoxyarabona 78.4 7.8 0.00027 38.7 9.3 97 281-380 34-143 (309)
112 1wa3_A 2-keto-3-deoxy-6-phosph 78.2 32 0.0011 31.2 12.9 126 278-437 72-202 (205)
113 1thf_D HISF protein; thermophI 77.8 10 0.00035 35.7 9.6 133 278-431 85-241 (253)
114 3g8r_A Probable spore coat pol 77.6 8.5 0.00029 39.5 9.4 94 301-419 77-172 (350)
115 2v82_A 2-dehydro-3-deoxy-6-pho 77.6 28 0.00095 31.9 12.3 111 272-414 11-127 (212)
116 1p1x_A Deoxyribose-phosphate a 77.5 17 0.00058 35.7 11.2 149 272-438 23-193 (260)
117 3vnd_A TSA, tryptophan synthas 77.0 10 0.00036 37.2 9.6 118 280-415 114-235 (267)
118 3nav_A Tryptophan synthase alp 77.0 13 0.00044 36.7 10.2 118 280-415 116-237 (271)
119 3b4u_A Dihydrodipicolinate syn 76.4 15 0.00052 36.2 10.7 98 280-380 28-139 (294)
120 4fxs_A Inosine-5'-monophosphat 76.3 7.8 0.00027 41.3 9.1 51 108-158 218-268 (496)
121 2cw6_A Hydroxymethylglutaryl-C 75.8 10 0.00035 37.4 9.2 157 274-438 24-198 (298)
122 3qze_A DHDPS, dihydrodipicolin 75.1 12 0.0004 37.5 9.5 96 281-380 49-155 (314)
123 3s5o_A 4-hydroxy-2-oxoglutarat 74.8 14 0.00048 36.8 10.0 97 281-380 40-148 (307)
124 2wkj_A N-acetylneuraminate lya 74.0 22 0.00074 35.3 11.1 96 281-380 37-144 (303)
125 3l21_A DHDPS, dihydrodipicolin 74.0 10 0.00035 37.8 8.7 96 281-380 41-147 (304)
126 1f6k_A N-acetylneuraminate lya 73.9 26 0.00087 34.5 11.6 97 280-380 28-136 (293)
127 1n7k_A Deoxyribose-phosphate a 73.9 31 0.0011 33.3 11.9 141 272-436 31-192 (234)
128 1h5y_A HISF; histidine biosynt 73.9 23 0.00078 32.7 10.7 134 278-431 88-244 (253)
129 3m5v_A DHDPS, dihydrodipicolin 73.6 14 0.00048 36.6 9.6 96 281-380 33-140 (301)
130 3qja_A IGPS, indole-3-glycerol 73.4 22 0.00075 34.9 10.8 109 278-417 73-191 (272)
131 3vav_A 3-methyl-2-oxobutanoate 72.3 39 0.0013 33.5 12.3 148 271-439 31-208 (275)
132 1ydo_A HMG-COA lyase; TIM-barr 72.0 21 0.0007 35.6 10.4 158 273-438 24-199 (307)
133 2k8i_A SLYD, peptidyl-prolyl C 72.0 15 0.00051 33.7 8.7 60 189-248 51-119 (171)
134 2czd_A Orotidine 5'-phosphate 72.0 31 0.001 31.8 11.1 127 280-435 69-205 (208)
135 3cqj_A L-ribulose-5-phosphate 71.9 42 0.0014 31.8 12.3 144 280-430 34-213 (295)
136 2ekc_A AQ_1548, tryptophan syn 71.8 20 0.00068 34.7 10.1 118 279-415 112-234 (262)
137 2yxg_A DHDPS, dihydrodipicolin 71.6 20 0.00068 35.2 10.2 96 281-380 26-132 (289)
138 1rd5_A Tryptophan synthase alp 71.3 41 0.0014 32.1 12.1 92 278-380 34-149 (262)
139 2v9d_A YAGE; dihydrodipicolini 71.2 12 0.00043 37.8 8.7 96 281-380 57-163 (343)
140 1vcv_A Probable deoxyribose-ph 71.0 2.5 8.6E-05 40.8 3.3 141 272-439 12-182 (226)
141 2ehh_A DHDPS, dihydrodipicolin 70.9 50 0.0017 32.4 12.9 97 280-380 25-132 (294)
142 3e96_A Dihydrodipicolinate syn 70.8 17 0.00058 36.2 9.6 97 281-381 38-144 (316)
143 2r8w_A AGR_C_1641P; APC7498, d 70.7 44 0.0015 33.6 12.7 97 280-380 59-166 (332)
144 3cpr_A Dihydrodipicolinate syn 70.2 26 0.00091 34.6 10.8 97 280-380 41-148 (304)
145 3m47_A Orotidine 5'-phosphate 70.0 11 0.00037 36.0 7.5 132 281-436 83-223 (228)
146 3inp_A D-ribulose-phosphate 3- 70.0 35 0.0012 33.1 11.3 139 272-436 32-190 (246)
147 3zwt_A Dihydroorotate dehydrog 69.8 43 0.0015 34.3 12.5 149 276-442 160-349 (367)
148 3kws_A Putative sugar isomeras 69.6 35 0.0012 32.2 11.2 148 280-431 42-216 (287)
149 3si9_A DHDPS, dihydrodipicolin 69.1 15 0.0005 36.8 8.6 96 281-380 48-154 (315)
150 2rfg_A Dihydrodipicolinate syn 68.9 19 0.00066 35.5 9.4 97 280-380 25-132 (297)
151 1ep3_A Dihydroorotate dehydrog 68.8 45 0.0015 32.2 12.0 136 284-441 119-290 (311)
152 3ewb_X 2-isopropylmalate synth 68.8 93 0.0032 30.6 14.4 154 274-438 24-192 (293)
153 1xky_A Dihydrodipicolinate syn 68.6 19 0.00066 35.6 9.3 96 281-380 38-144 (301)
154 3ctl_A D-allulose-6-phosphate 68.6 57 0.002 31.1 12.4 129 281-436 18-162 (231)
155 3glc_A Aldolase LSRF; TIM barr 68.3 62 0.0021 32.2 13.0 131 281-437 130-279 (295)
156 3o63_A Probable thiamine-phosp 67.9 32 0.0011 33.1 10.5 126 284-437 107-241 (243)
157 3dz1_A Dihydrodipicolinate syn 67.9 32 0.0011 34.2 10.8 94 281-380 34-140 (313)
158 3rmj_A 2-isopropylmalate synth 67.7 94 0.0032 31.7 14.5 159 273-439 30-200 (370)
159 1qop_A Tryptophan synthase alp 67.7 23 0.00079 34.2 9.5 119 279-415 112-234 (268)
160 2y88_A Phosphoribosyl isomeras 67.6 12 0.00041 35.0 7.3 124 281-423 36-177 (244)
161 1vzw_A Phosphoribosyl isomeras 67.5 24 0.00081 33.1 9.4 133 278-431 86-239 (244)
162 3q58_A N-acetylmannosamine-6-p 67.5 34 0.0012 32.5 10.5 109 276-413 35-154 (229)
163 3i65_A Dihydroorotate dehydrog 67.4 10 0.00034 39.8 7.2 104 267-375 274-401 (415)
164 3flu_A DHDPS, dihydrodipicolin 67.2 24 0.00083 34.8 9.7 96 281-380 33-139 (297)
165 2vc6_A MOSA, dihydrodipicolina 67.2 22 0.00075 34.9 9.4 97 280-380 25-132 (292)
166 3dx5_A Uncharacterized protein 67.1 47 0.0016 31.1 11.5 146 280-432 19-191 (286)
167 2qr6_A IMP dehydrogenase/GMP r 67.1 10 0.00036 38.7 7.2 75 278-354 221-314 (393)
168 1o66_A 3-methyl-2-oxobutanoate 67.0 41 0.0014 33.3 11.2 147 272-439 20-196 (275)
169 3usb_A Inosine-5'-monophosphat 66.7 8 0.00027 41.4 6.5 51 108-158 243-293 (511)
170 3na8_A Putative dihydrodipicol 66.7 38 0.0013 33.8 11.1 96 281-380 50-156 (315)
171 1xi3_A Thiamine phosphate pyro 66.1 63 0.0022 29.1 11.8 102 279-416 29-136 (215)
172 1wa3_A 2-keto-3-deoxy-6-phosph 66.1 39 0.0013 30.6 10.3 99 283-415 29-131 (205)
173 3tak_A DHDPS, dihydrodipicolin 66.1 25 0.00085 34.5 9.5 96 281-380 27-133 (291)
174 1o5k_A DHDPS, dihydrodipicolin 65.8 23 0.0008 35.1 9.3 96 281-380 38-144 (306)
175 3qfe_A Putative dihydrodipicol 65.7 25 0.00085 35.2 9.5 97 281-380 37-145 (318)
176 1tv5_A Dhodehase, dihydroorota 65.7 65 0.0022 33.9 13.1 87 317-415 296-402 (443)
177 3tha_A Tryptophan synthase alp 65.6 34 0.0012 33.4 10.2 116 281-415 108-227 (252)
178 3igs_A N-acetylmannosamine-6-p 65.2 47 0.0016 31.5 11.0 109 276-413 35-154 (232)
179 2w6r_A Imidazole glycerol phos 65.0 38 0.0013 32.0 10.4 130 278-424 85-238 (266)
180 4fo4_A Inosine 5'-monophosphat 64.6 12 0.0004 38.6 7.0 47 112-158 99-145 (366)
181 3ovp_A Ribulose-phosphate 3-ep 64.5 76 0.0026 30.1 12.3 118 280-422 21-149 (228)
182 3d0c_A Dihydrodipicolinate syn 64.1 43 0.0015 33.3 10.9 96 281-380 38-143 (314)
183 1eep_A Inosine 5'-monophosphat 64.1 9.8 0.00034 39.1 6.4 51 109-159 141-191 (404)
184 3exr_A RMPD (hexulose-6-phosph 64.0 69 0.0024 30.1 11.9 137 285-436 78-217 (221)
185 3f4w_A Putative hexulose 6 pho 63.9 50 0.0017 30.0 10.7 105 286-415 22-134 (211)
186 2o55_A Putative glycerophospho 63.5 18 0.00062 34.5 7.7 58 363-436 201-258 (258)
187 1vyr_A Pentaerythritol tetrani 63.0 63 0.0022 32.8 12.1 124 273-415 150-323 (364)
188 3cgm_A SLYD, peptidyl-prolyl C 63.0 32 0.0011 31.0 8.9 60 189-248 46-115 (158)
189 2fli_A Ribulose-phosphate 3-ep 63.0 80 0.0027 28.7 11.9 87 280-381 20-116 (220)
190 2y88_A Phosphoribosyl isomeras 62.9 36 0.0012 31.7 9.6 126 278-423 85-233 (244)
191 3hgj_A Chromate reductase; TIM 62.6 42 0.0014 33.8 10.6 131 273-415 141-318 (349)
192 1jcn_A Inosine monophosphate d 62.6 17 0.00059 38.5 8.1 51 109-159 243-293 (514)
193 3lmz_A Putative sugar isomeras 62.5 80 0.0027 29.3 12.0 91 279-381 33-133 (257)
194 4avf_A Inosine-5'-monophosphat 62.5 14 0.00048 39.2 7.3 51 108-158 216-266 (490)
195 3l6b_A Serine racemase; pyrido 62.4 79 0.0027 31.6 12.6 116 365-505 90-211 (346)
196 3noy_A 4-hydroxy-3-methylbut-2 62.1 1.1E+02 0.0039 31.4 13.6 138 280-437 50-202 (366)
197 3khj_A Inosine-5-monophosphate 62.1 12 0.0004 38.3 6.5 45 112-158 98-142 (361)
198 1nvm_A HOA, 4-hydroxy-2-oxoval 62.1 1.3E+02 0.0045 30.0 14.4 149 274-438 27-191 (345)
199 2gou_A Oxidoreductase, FMN-bin 62.1 48 0.0017 33.6 11.1 121 273-415 150-322 (365)
200 3nav_A Tryptophan synthase alp 61.7 48 0.0016 32.6 10.5 90 279-378 37-154 (271)
201 2ojp_A DHDPS, dihydrodipicolin 61.7 21 0.0007 35.2 8.0 97 280-380 26-133 (292)
202 3dwg_A Cysteine synthase B; su 61.7 66 0.0023 31.8 11.8 118 364-505 86-212 (325)
203 2e6f_A Dihydroorotate dehydrog 61.6 30 0.001 33.8 9.2 141 282-441 112-294 (314)
204 4dt4_A FKBP-type 16 kDa peptid 61.4 36 0.0012 31.2 9.0 60 189-248 74-143 (169)
205 1ve1_A O-acetylserine sulfhydr 61.1 74 0.0025 30.9 11.9 116 365-505 76-201 (304)
206 2z6i_A Trans-2-enoyl-ACP reduc 61.0 1.2E+02 0.0041 29.9 13.6 124 262-416 11-138 (332)
207 2nli_A Lactate oxidase; flavoe 60.7 14 0.00048 37.8 6.7 63 278-347 239-314 (368)
208 2gn0_A Threonine dehydratase c 60.6 97 0.0033 30.8 12.9 116 365-505 102-223 (342)
209 3ndz_A Endoglucanase D; cellot 60.5 21 0.00071 35.7 7.9 54 121-177 43-106 (345)
210 2kfw_A FKBP-type peptidyl-prol 60.2 8.3 0.00028 36.3 4.5 59 189-247 51-118 (196)
211 1aj0_A DHPS, dihydropteroate s 60.1 27 0.00093 34.5 8.5 68 109-179 14-102 (282)
212 3ivs_A Homocitrate synthase, m 60.1 1.7E+02 0.0058 30.6 15.7 153 274-437 58-221 (423)
213 3i65_A Dihydroorotate dehydrog 60.0 57 0.0019 34.1 11.3 140 286-442 208-396 (415)
214 1yad_A Regulatory protein TENI 60.0 37 0.0013 31.3 9.0 86 278-373 119-215 (221)
215 2kr7_A FKBP-type peptidyl-prol 60.0 41 0.0014 29.9 9.0 60 189-248 56-124 (151)
216 1ypf_A GMP reductase; GUAC, pu 59.3 13 0.00046 37.2 6.2 72 278-353 159-246 (336)
217 1gox_A (S)-2-hydroxy-acid oxid 59.2 14 0.00049 37.6 6.5 67 279-347 236-310 (370)
218 3cwc_A Putative glycerate kina 58.9 80 0.0027 32.7 12.0 60 319-381 267-326 (383)
219 2nzl_A Hydroxyacid oxidase 1; 58.6 17 0.00057 37.6 6.9 67 278-348 262-338 (392)
220 1wv2_A Thiazole moeity, thiazo 58.1 39 0.0013 33.4 9.0 82 340-437 157-238 (265)
221 3pc3_A CG1753, isoform A; CBS, 58.1 54 0.0018 34.7 11.0 123 365-505 127-256 (527)
222 1rd5_A Tryptophan synthase alp 58.0 53 0.0018 31.2 10.0 114 285-415 114-230 (262)
223 2h6r_A Triosephosphate isomera 57.7 38 0.0013 31.8 8.8 132 282-432 75-216 (219)
224 3oa3_A Aldolase; structural ge 57.2 33 0.0011 34.3 8.5 145 272-437 69-230 (288)
225 3icg_A Endoglucanase D; cellul 57.2 24 0.00081 37.3 8.0 54 121-177 46-109 (515)
226 1zzm_A Putative deoxyribonucle 57.1 50 0.0017 30.7 9.5 99 280-381 23-134 (259)
227 1vs1_A 3-deoxy-7-phosphoheptul 56.9 1.4E+02 0.0049 29.2 13.1 123 283-429 59-195 (276)
228 1z41_A YQJM, probable NADH-dep 56.7 62 0.0021 32.3 10.7 128 273-415 133-307 (338)
229 1tvn_A Cellulase, endoglucanas 56.7 18 0.00062 34.8 6.5 53 121-176 39-101 (293)
230 1tqj_A Ribulose-phosphate 3-ep 56.6 74 0.0025 30.0 10.6 143 272-439 9-168 (230)
231 1kbi_A Cytochrome B2, L-LCR; f 56.5 38 0.0013 36.2 9.4 96 300-416 331-433 (511)
232 1p5j_A L-serine dehydratase; l 56.3 93 0.0032 31.5 12.0 116 366-505 108-231 (372)
233 2r14_A Morphinone reductase; H 56.3 75 0.0026 32.4 11.3 125 273-415 155-328 (377)
234 1qpo_A Quinolinate acid phosph 56.2 15 0.00051 36.5 5.8 64 279-347 204-270 (284)
235 3sgz_A Hydroxyacid oxidase 2; 56.2 19 0.00067 36.8 6.8 70 279-350 228-305 (352)
236 3iwp_A Copper homeostasis prot 56.0 1E+02 0.0034 30.8 11.7 142 277-440 47-208 (287)
237 1h5y_A HISF; histidine biosynt 55.9 29 0.00099 32.0 7.6 84 279-377 157-251 (253)
238 1vc4_A Indole-3-glycerol phosp 55.8 51 0.0018 31.8 9.5 132 278-431 117-252 (254)
239 3a5f_A Dihydrodipicolinate syn 55.8 22 0.00074 35.0 6.9 70 280-349 26-106 (291)
240 1ub3_A Aldolase protein; schif 55.8 39 0.0013 32.1 8.5 144 272-435 14-173 (220)
241 3o1n_A 3-dehydroquinate dehydr 55.8 1.1E+02 0.0039 29.8 12.2 139 279-437 122-275 (276)
242 1mzh_A Deoxyribose-phosphate a 55.7 85 0.0029 29.5 10.9 144 272-434 15-171 (225)
243 3ks6_A Glycerophosphoryl diest 55.4 31 0.0011 32.8 7.9 53 363-435 193-245 (250)
244 2hmc_A AGR_L_411P, dihydrodipi 54.3 56 0.0019 33.1 9.9 95 281-380 52-157 (344)
245 1ujp_A Tryptophan synthase alp 54.2 28 0.00096 34.1 7.4 117 280-415 110-229 (271)
246 1m3u_A 3-methyl-2-oxobutanoate 54.2 65 0.0022 31.7 10.0 129 274-414 22-180 (264)
247 1grj_A GREA protein; transcrip 54.1 3.3 0.00011 37.7 0.6 129 70-242 4-156 (158)
248 1dxe_A 2-dehydro-3-deoxy-galac 54.0 76 0.0026 30.4 10.4 67 278-345 29-97 (256)
249 1y7l_A O-acetylserine sulfhydr 53.7 1.4E+02 0.0047 29.1 12.5 119 365-505 76-204 (316)
250 3eb2_A Putative dihydrodipicol 53.7 41 0.0014 33.2 8.6 96 281-380 30-136 (300)
251 3h5d_A DHDPS, dihydrodipicolin 53.3 36 0.0012 33.8 8.2 97 280-380 32-140 (311)
252 4adt_A Pyridoxine biosynthetic 53.2 68 0.0023 31.9 10.1 124 280-438 32-174 (297)
253 3rcm_A TATD family hydrolase; 53.2 68 0.0023 31.4 10.1 102 277-381 17-134 (287)
254 3m5v_A DHDPS, dihydrodipicolin 53.1 57 0.0019 32.1 9.5 90 340-439 42-134 (301)
255 3tbh_A O-acetyl serine sulfhyd 53.1 92 0.0031 30.9 11.2 118 364-505 85-212 (334)
256 2gjl_A Hypothetical protein PA 52.9 1.8E+02 0.006 28.6 16.4 127 262-417 14-147 (328)
257 3iau_A Threonine deaminase; py 52.8 1.1E+02 0.0039 30.6 12.0 116 365-505 122-243 (366)
258 1qop_A Tryptophan synthase alp 52.8 1.3E+02 0.0045 28.8 12.0 91 279-379 34-152 (268)
259 2r91_A 2-keto-3-deoxy-(6-phosp 52.7 94 0.0032 30.2 11.0 95 280-380 23-128 (286)
260 4djd_D C/Fe-SP, corrinoid/iron 52.6 56 0.0019 33.1 9.4 149 277-438 142-317 (323)
261 3b0p_A TRNA-dihydrouridine syn 52.4 88 0.003 31.4 11.0 121 280-415 74-225 (350)
262 2pqm_A Cysteine synthase; OASS 52.1 89 0.003 31.1 10.9 117 365-505 92-218 (343)
263 2q3b_A Cysteine synthase A; py 52.1 1.5E+02 0.0051 28.8 12.4 116 366-505 82-207 (313)
264 2b7n_A Probable nicotinate-nuc 51.9 31 0.0011 33.8 7.3 64 279-347 192-258 (273)
265 3ngf_A AP endonuclease, family 51.9 73 0.0025 29.8 9.8 150 276-431 22-203 (269)
266 3kru_A NADH:flavin oxidoreduct 51.8 66 0.0023 32.5 10.0 129 273-415 132-307 (343)
267 1to3_A Putative aldolase YIHT; 51.7 1.9E+02 0.0064 28.6 13.4 144 281-440 113-291 (304)
268 1tv5_A Dhodehase, dihydroorota 51.7 16 0.00056 38.5 5.6 100 272-375 306-429 (443)
269 1edg_A Endoglucanase A; family 51.7 33 0.0011 34.5 7.6 54 121-177 62-124 (380)
270 3bo9_A Putative nitroalkan dio 51.6 1.9E+02 0.0065 28.6 16.8 147 260-437 23-174 (326)
271 1egz_A Endoglucanase Z, EGZ, C 51.1 19 0.00065 34.5 5.6 53 121-176 39-99 (291)
272 1xm3_A Thiazole biosynthesis p 51.0 1.3E+02 0.0045 28.9 11.6 94 332-441 139-233 (264)
273 2yr1_A 3-dehydroquinate dehydr 50.8 62 0.0021 31.3 9.2 133 282-432 38-190 (257)
274 1thf_D HISF protein; thermophI 50.7 70 0.0024 29.8 9.4 68 278-350 31-107 (253)
275 3l55_A B-1,4-endoglucanase/cel 50.7 26 0.00089 35.4 6.7 54 121-177 53-114 (353)
276 1tdj_A Biosynthetic threonine 50.5 1.7E+02 0.0058 31.3 13.3 115 366-505 94-214 (514)
277 3lab_A Putative KDPG (2-keto-3 50.3 43 0.0015 32.1 7.7 100 284-415 33-139 (217)
278 2nuw_A 2-keto-3-deoxygluconate 50.3 91 0.0031 30.4 10.5 96 280-380 24-129 (288)
279 3l5l_A Xenobiotic reductase A; 49.8 48 0.0016 33.6 8.6 129 273-415 147-325 (363)
280 3ngj_A Deoxyribose-phosphate a 49.4 1.4E+02 0.0048 28.9 11.3 144 272-435 38-197 (239)
281 1oy0_A Ketopantoate hydroxymet 49.3 1.1E+02 0.0039 30.3 10.9 148 271-439 36-214 (281)
282 4af0_A Inosine-5'-monophosphat 49.3 16 0.00056 39.6 5.1 51 108-158 268-318 (556)
283 4h27_A L-serine dehydratase/L- 49.2 90 0.0031 31.4 10.5 117 365-505 107-231 (364)
284 3glc_A Aldolase LSRF; TIM barr 49.1 87 0.003 31.1 10.1 154 328-503 70-229 (295)
285 1z7w_A Cysteine synthase; tran 49.1 1.3E+02 0.0045 29.4 11.5 120 365-505 81-207 (322)
286 3ble_A Citramalate synthase fr 48.9 2.2E+02 0.0074 28.4 14.8 130 281-431 101-264 (337)
287 4ef8_A Dihydroorotate dehydrog 48.6 71 0.0024 32.5 9.6 116 287-415 153-306 (354)
288 3tva_A Xylose isomerase domain 48.3 1.2E+02 0.004 28.5 10.6 141 280-431 25-203 (290)
289 2ztj_A Homocitrate synthase; ( 48.2 2.4E+02 0.0081 28.7 14.4 117 278-412 76-218 (382)
290 1vrd_A Inosine-5'-monophosphat 48.0 26 0.00088 36.8 6.4 49 111-159 227-275 (494)
291 1w3i_A EDA, 2-keto-3-deoxy glu 47.9 1E+02 0.0036 30.1 10.5 96 280-380 24-129 (293)
292 3ayr_A Endoglucanase; TIM barr 47.9 45 0.0015 33.4 8.0 53 121-176 63-125 (376)
293 3fok_A Uncharacterized protein 47.9 1.4E+02 0.0049 29.9 11.4 100 400-502 133-242 (307)
294 2xio_A Putative deoxyribonucle 47.9 47 0.0016 32.2 7.9 102 278-381 28-147 (301)
295 2rkb_A Serine dehydratase-like 47.9 1.8E+02 0.0061 28.3 12.2 115 366-505 69-191 (318)
296 1vr6_A Phospho-2-dehydro-3-deo 47.8 2.1E+02 0.0071 29.2 12.9 108 283-414 127-246 (350)
297 2kct_A Cytochrome C-type bioge 47.7 77 0.0027 26.4 8.0 55 175-229 7-65 (94)
298 1p0k_A Isopentenyl-diphosphate 47.5 86 0.003 31.2 10.0 31 374-416 251-281 (349)
299 3zwt_A Dihydroorotate dehydrog 47.5 37 0.0013 34.7 7.3 100 272-375 229-354 (367)
300 3gr7_A NADPH dehydrogenase; fl 47.1 2.1E+02 0.0071 28.6 12.7 128 273-415 133-307 (340)
301 2c6q_A GMP reductase 2; TIM ba 47.0 65 0.0022 32.6 9.0 71 278-352 171-258 (351)
302 3bdk_A D-mannonate dehydratase 46.8 68 0.0023 33.0 9.2 65 275-339 29-112 (386)
303 3sz8_A 2-dehydro-3-deoxyphosph 46.7 1.5E+02 0.005 29.5 11.2 106 287-416 49-169 (285)
304 1x1o_A Nicotinate-nucleotide p 46.6 41 0.0014 33.4 7.3 63 277-347 204-269 (286)
305 1ve5_A Threonine deaminase; ri 46.0 1.4E+02 0.0048 28.9 11.1 116 365-505 79-204 (311)
306 1ep3_A Dihydroorotate dehydrog 45.7 36 0.0012 33.0 6.6 88 280-375 180-296 (311)
307 1p0k_A Isopentenyl-diphosphate 45.5 34 0.0012 34.2 6.6 18 279-296 192-209 (349)
308 2q02_A Putative cytoplasmic pr 45.2 1.7E+02 0.0059 26.8 11.1 123 279-405 22-161 (272)
309 1v71_A Serine racemase, hypoth 45.1 1.3E+02 0.0044 29.5 10.7 116 365-505 88-209 (323)
310 3fs2_A 2-dehydro-3-deoxyphosph 45.1 1.3E+02 0.0043 30.2 10.6 105 287-415 70-189 (298)
311 4aec_A Cysteine synthase, mito 44.9 1.1E+02 0.0037 32.0 10.5 120 365-505 189-315 (430)
312 3l12_A Putative glycerophospho 44.7 93 0.0032 30.4 9.6 50 363-432 257-306 (313)
313 2v03_A Cysteine synthase B; py 44.6 1.5E+02 0.0051 28.7 11.0 117 365-505 75-200 (303)
314 1yx1_A Hypothetical protein PA 44.6 73 0.0025 29.7 8.5 138 280-431 27-181 (264)
315 4adt_A Pyridoxine biosynthetic 44.5 34 0.0011 34.2 6.3 140 279-438 90-261 (297)
316 2uva_G Fatty acid synthase bet 44.5 80 0.0027 39.6 10.7 119 280-414 657-794 (2060)
317 2egu_A Cysteine synthase; O-ac 44.3 1.3E+02 0.0043 29.2 10.4 119 365-505 79-204 (308)
318 1o4u_A Type II quinolic acid p 44.1 18 0.0006 36.1 4.1 65 278-347 202-269 (285)
319 1jbq_A B, cystathionine beta-s 44.1 1E+02 0.0034 32.2 10.1 123 365-505 175-304 (435)
320 1to3_A Putative aldolase YIHT; 44.0 42 0.0014 33.3 6.9 76 282-357 183-265 (304)
321 1vli_A Spore coat polysacchari 43.9 60 0.002 33.7 8.2 55 340-414 135-191 (385)
322 3ffs_A Inosine-5-monophosphate 43.9 22 0.00075 37.0 5.0 43 114-158 139-181 (400)
323 2zbt_A Pyridoxal biosynthesis 43.8 61 0.0021 31.4 8.0 120 279-431 31-167 (297)
324 3kht_A Response regulator; PSI 43.7 1.3E+02 0.0044 24.4 10.3 116 299-440 13-131 (144)
325 2nli_A Lactate oxidase; flavoe 43.7 64 0.0022 32.8 8.4 94 300-415 217-313 (368)
326 3flu_A DHDPS, dihydrodipicolin 43.7 1.1E+02 0.0039 29.8 10.0 89 340-439 42-133 (297)
327 1h1n_A Endo type cellulase ENG 43.6 30 0.001 33.6 5.7 53 122-177 33-95 (305)
328 2aam_A Hypothetical protein TM 43.5 1.3E+02 0.0044 30.0 10.4 93 282-380 128-246 (309)
329 1y0e_A Putative N-acetylmannos 42.9 1.9E+02 0.0066 26.2 14.7 127 283-437 30-173 (223)
330 2yr1_A 3-dehydroquinate dehydr 42.7 2.3E+02 0.0077 27.3 11.8 145 272-437 95-254 (257)
331 1geq_A Tryptophan synthase alp 42.7 2.1E+02 0.0071 26.5 13.9 100 317-438 80-190 (248)
332 1j0a_A 1-aminocyclopropane-1-c 42.7 85 0.0029 30.8 8.9 122 364-505 85-216 (325)
333 2yci_X 5-methyltetrahydrofolat 42.4 30 0.001 33.9 5.5 53 123-178 37-89 (271)
334 1f76_A Dihydroorotate dehydrog 42.2 41 0.0014 33.3 6.5 71 274-350 222-322 (336)
335 2zbt_A Pyridoxal biosynthesis 42.2 65 0.0022 31.2 7.9 139 279-436 90-259 (297)
336 2yzr_A Pyridoxal biosynthesis 42.1 2.9E+02 0.0099 28.0 12.8 38 399-436 255-292 (330)
337 1mdl_A Mandelate racemase; iso 42.1 51 0.0017 32.9 7.3 60 109-174 133-196 (359)
338 1jw9_B Molybdopterin biosynthe 42.0 82 0.0028 29.9 8.5 66 304-380 87-152 (249)
339 1zcc_A Glycerophosphodiester p 42.0 1.2E+02 0.0039 28.7 9.5 56 359-434 178-235 (248)
340 1kbi_A Cytochrome B2, L-LCR; f 41.8 38 0.0013 36.2 6.6 68 279-348 354-434 (511)
341 3pr9_A FKBP-type peptidyl-prol 41.8 65 0.0022 29.0 7.2 58 189-248 63-128 (157)
342 3nbm_A PTS system, lactose-spe 41.7 20 0.00069 30.4 3.6 66 300-380 19-84 (108)
343 1vc4_A Indole-3-glycerol phosp 41.4 60 0.002 31.3 7.4 66 278-347 163-237 (254)
344 2yw3_A 4-hydroxy-2-oxoglutarat 41.2 2.2E+02 0.0074 26.3 11.9 108 279-422 73-186 (207)
345 3qz6_A HPCH/HPAI aldolase; str 41.1 1E+02 0.0036 29.7 9.1 65 280-345 28-94 (261)
346 4dpp_A DHDPS 2, dihydrodipicol 41.0 63 0.0022 33.1 7.8 68 281-348 85-163 (360)
347 2htm_A Thiazole biosynthesis p 40.9 1.7E+02 0.0057 28.9 10.5 83 340-437 146-229 (268)
348 1o58_A O-acetylserine sulfhydr 40.7 1.6E+02 0.0056 28.4 10.6 116 365-505 79-205 (303)
349 1xwy_A DNAse TATD, deoxyribonu 40.3 1.6E+02 0.0054 27.3 10.1 100 278-381 20-132 (264)
350 1yxy_A Putative N-acetylmannos 40.2 2.2E+02 0.0076 26.1 11.1 111 272-412 29-157 (234)
351 3tml_A 2-dehydro-3-deoxyphosph 40.2 2.2E+02 0.0075 28.2 11.4 106 287-416 46-172 (288)
352 3nco_A Endoglucanase fncel5A; 40.1 57 0.0019 31.6 7.1 52 122-176 43-104 (320)
353 3qze_A DHDPS, dihydrodipicolin 40.1 1.1E+02 0.0038 30.3 9.4 89 340-439 58-149 (314)
354 2cks_A Endoglucanase E-5; carb 39.6 45 0.0015 32.3 6.2 52 122-176 44-102 (306)
355 3tsm_A IGPS, indole-3-glycerol 39.5 2.6E+02 0.0089 27.3 11.8 108 278-416 80-197 (272)
356 3r12_A Deoxyribose-phosphate a 39.3 39 0.0013 33.3 5.7 142 272-435 54-213 (260)
357 2whl_A Beta-mannanase, baman5; 39.3 30 0.001 33.2 4.9 53 122-177 33-87 (294)
358 2wkj_A N-acetylneuraminate lya 39.0 1.7E+02 0.0058 28.7 10.5 95 334-439 39-137 (303)
359 1qo2_A Molecule: N-((5-phospho 38.9 2.4E+02 0.0081 26.1 11.2 131 277-428 83-236 (241)
360 2vef_A Dihydropteroate synthas 38.7 83 0.0028 31.5 8.1 68 108-178 8-96 (314)
361 2jbm_A Nicotinate-nucleotide p 38.5 57 0.002 32.4 6.9 64 279-347 207-273 (299)
362 3qvq_A Phosphodiesterase OLEI0 38.2 55 0.0019 31.0 6.5 102 291-432 145-248 (252)
363 3gka_A N-ethylmaleimide reduct 37.9 2.8E+02 0.0094 28.1 12.1 115 272-415 149-316 (361)
364 4e8b_A Ribosomal RNA small sub 37.7 1E+02 0.0036 29.6 8.5 76 216-295 27-109 (251)
365 3p6l_A Sugar phosphate isomera 37.6 2.4E+02 0.0083 25.8 11.4 90 279-380 25-134 (262)
366 1tx2_A DHPS, dihydropteroate s 37.5 83 0.0028 31.3 7.9 69 108-179 38-127 (297)
367 2ehh_A DHDPS, dihydrodipicolin 37.5 1.5E+02 0.0051 28.9 9.7 95 334-439 28-126 (294)
368 1zud_1 Adenylyltransferase THI 37.4 1.1E+02 0.0039 28.9 8.7 67 303-380 83-149 (251)
369 3oix_A Putative dihydroorotate 37.2 1.6E+02 0.0054 29.8 10.0 137 287-441 152-325 (345)
370 1ece_A Endocellulase E1; glyco 37.0 33 0.0011 33.7 4.9 52 123-177 47-118 (358)
371 3ajx_A 3-hexulose-6-phosphate 36.9 2.3E+02 0.0079 25.3 10.8 121 288-436 24-156 (207)
372 2d73_A Alpha-glucosidase SUSB; 36.9 1.4E+02 0.0049 33.5 10.3 103 275-380 370-507 (738)
373 3r2g_A Inosine 5'-monophosphat 36.7 32 0.0011 35.3 4.8 46 114-159 93-138 (361)
374 2jep_A Xyloglucanase; family 5 36.6 74 0.0025 31.8 7.5 54 121-177 70-133 (395)
375 1zco_A 2-dehydro-3-deoxyphosph 36.1 93 0.0032 30.2 7.9 125 270-414 87-226 (262)
376 2v9d_A YAGE; dihydrodipicolini 36.1 1.4E+02 0.0047 30.1 9.4 95 334-439 59-157 (343)
377 3h43_A Proteasome-activating n 36.1 73 0.0025 25.9 6.0 59 173-238 13-74 (85)
378 2ojp_A DHDPS, dihydrodipicolin 36.0 1.2E+02 0.0042 29.5 8.8 95 334-439 29-127 (292)
379 3cpr_A Dihydrodipicolinate syn 35.9 1.9E+02 0.0063 28.4 10.2 95 334-439 44-142 (304)
380 3sgz_A Hydroxyacid oxidase 2; 35.9 1.7E+02 0.0059 29.8 10.1 30 374-415 272-301 (352)
381 3aof_A Endoglucanase; glycosyl 35.8 54 0.0019 31.5 6.1 52 122-176 35-96 (317)
382 1ix5_A FKBP; ppiase, isomerase 35.6 30 0.001 30.8 3.9 58 189-248 64-129 (151)
383 3cwo_X Beta/alpha-barrel prote 35.6 2.3E+02 0.008 25.0 10.4 128 279-427 65-215 (237)
384 1eye_A DHPS 1, dihydropteroate 35.5 68 0.0023 31.6 6.8 52 124-179 33-92 (280)
385 1ceo_A Cellulase CELC; glycosy 35.5 47 0.0016 32.4 5.7 51 122-175 30-90 (343)
386 3knb_A Titin; IG-like, titin, 35.5 1.1E+02 0.0038 24.0 7.1 69 185-253 12-85 (100)
387 1f6k_A N-acetylneuraminate lya 35.5 1.6E+02 0.0054 28.7 9.5 96 333-439 30-130 (293)
388 2r8w_A AGR_C_1641P; APC7498, d 35.4 1.7E+02 0.0059 29.1 10.0 95 334-439 62-160 (332)
389 3vkj_A Isopentenyl-diphosphate 35.2 68 0.0023 32.8 7.0 124 272-415 129-296 (368)
390 3fij_A LIN1909 protein; 11172J 35.1 90 0.0031 29.7 7.5 62 313-379 39-113 (254)
391 1y8q_A Ubiquitin-like 1 activa 35.1 1.3E+02 0.0044 30.2 9.0 66 303-380 91-156 (346)
392 2yxg_A DHDPS, dihydrodipicolin 35.1 1.9E+02 0.0063 28.1 9.9 95 334-439 28-126 (289)
393 1xky_A Dihydrodipicolinate syn 35.0 1.6E+02 0.0055 28.8 9.5 94 335-439 41-138 (301)
394 3ih1_A Methylisocitrate lyase; 34.9 2.5E+02 0.0084 28.0 10.9 111 282-414 110-242 (305)
395 3l49_A ABC sugar (ribose) tran 34.9 2.7E+02 0.0091 25.5 11.4 66 305-380 25-92 (291)
396 1v8a_A Hydroxyethylthiazole ki 34.9 45 0.0015 32.2 5.3 48 330-382 47-94 (265)
397 3apt_A Methylenetetrahydrofola 34.8 44 0.0015 33.3 5.4 63 277-339 161-223 (310)
398 1j6o_A TATD-related deoxyribon 34.8 86 0.003 29.6 7.3 101 277-381 27-140 (268)
399 3tak_A DHDPS, dihydrodipicolin 34.8 1.9E+02 0.0066 28.0 10.0 89 340-439 36-127 (291)
400 3daq_A DHDPS, dihydrodipicolin 34.8 2E+02 0.0069 28.0 10.1 95 334-439 30-128 (292)
401 2wg5_A General control protein 34.8 1.3E+02 0.0046 25.3 7.7 60 173-239 32-94 (109)
402 3l23_A Sugar phosphate isomera 34.6 1.8E+02 0.0063 27.8 9.8 102 280-381 33-166 (303)
403 2nzl_A Hydroxyacid oxidase 1; 34.6 52 0.0018 33.9 6.0 95 300-416 240-337 (392)
404 3sr7_A Isopentenyl-diphosphate 34.5 43 0.0015 34.3 5.3 55 374-442 278-337 (365)
405 2ovl_A Putative racemase; stru 34.2 56 0.0019 32.8 6.2 62 109-174 133-198 (371)
406 3h8v_A Ubiquitin-like modifier 34.1 1.2E+02 0.0042 29.9 8.5 68 303-380 90-168 (292)
407 8abp_A L-arabinose-binding pro 34.1 1.4E+02 0.0048 27.7 8.6 66 305-381 22-89 (306)
408 3b0p_A TRNA-dihydrouridine syn 34.1 52 0.0018 33.1 5.8 66 281-350 149-229 (350)
409 3iwp_A Copper homeostasis prot 34.0 1.1E+02 0.0037 30.5 8.0 119 279-416 114-239 (287)
410 3no3_A Glycerophosphodiester p 33.9 2.9E+02 0.0099 25.7 10.8 51 363-433 185-235 (238)
411 1nu5_A Chloromuconate cycloiso 33.9 66 0.0022 32.2 6.6 46 125-174 149-195 (370)
412 1xg4_A Probable methylisocitra 33.8 90 0.0031 31.0 7.4 63 281-348 172-237 (295)
413 3fst_A 5,10-methylenetetrahydr 33.8 39 0.0013 33.7 4.8 60 277-336 164-223 (304)
414 2qkf_A 3-deoxy-D-manno-octulos 33.8 2.5E+02 0.0085 27.5 10.6 106 304-433 75-186 (280)
415 1rvk_A Isomerase/lactonizing e 33.7 85 0.0029 31.5 7.4 60 317-386 251-313 (382)
416 4d9i_A Diaminopropionate ammon 33.5 2.5E+02 0.0085 28.4 11.0 122 365-505 126-260 (398)
417 1o66_A 3-methyl-2-oxobutanoate 33.5 78 0.0027 31.3 6.8 146 340-503 38-202 (275)
418 1vcf_A Isopentenyl-diphosphate 33.2 69 0.0024 31.8 6.5 90 302-415 172-285 (332)
419 2y1h_A Putative deoxyribonucle 33.2 41 0.0014 31.7 4.7 104 278-382 21-147 (272)
420 1i60_A IOLI protein; beta barr 33.1 1.8E+02 0.0062 26.6 9.1 101 280-380 18-142 (278)
421 4dbe_A Orotidine 5'-phosphate 33.0 55 0.0019 31.0 5.5 83 279-367 125-208 (222)
422 2g0w_A LMO2234 protein; putati 32.9 2.5E+02 0.0086 26.5 10.4 95 280-379 40-153 (296)
423 1k77_A EC1530, hypothetical pr 32.8 1.7E+02 0.0059 26.6 8.9 99 280-379 19-142 (260)
424 2gdq_A YITF; mandelate racemas 32.8 1E+02 0.0034 31.2 7.8 46 125-174 146-191 (382)
425 3hgm_A Universal stress protei 32.5 58 0.002 26.9 5.1 38 465-503 100-147 (147)
426 3jr2_A Hexulose-6-phosphate sy 32.4 2.2E+02 0.0076 26.1 9.6 126 286-435 28-163 (218)
427 3stp_A Galactonate dehydratase 32.4 64 0.0022 33.3 6.3 65 108-174 166-237 (412)
428 1oy0_A Ketopantoate hydroxymet 32.4 71 0.0024 31.7 6.3 33 470-503 187-220 (281)
429 3vup_A Beta-1,4-mannanase; TIM 32.3 46 0.0016 31.0 4.9 49 123-174 45-110 (351)
430 3oru_A DUF1989 family protein; 32.2 62 0.0021 31.4 5.7 56 187-242 46-115 (234)
431 1tkk_A Similar to chloromucona 32.1 86 0.0029 31.3 7.1 46 125-174 147-192 (366)
432 3cny_A Inositol catabolism pro 32.1 2.6E+02 0.0088 26.0 10.2 100 280-381 35-161 (301)
433 4d9b_A D-cysteine desulfhydras 32.0 3.8E+02 0.013 26.4 12.2 122 365-505 97-234 (342)
434 7a3h_A Endoglucanase; hydrolas 31.8 54 0.0019 31.8 5.4 53 120-176 43-102 (303)
435 1h4p_A Glucan 1,3-beta-glucosi 31.8 54 0.0018 33.7 5.6 52 122-176 75-136 (408)
436 1f2d_A 1-aminocyclopropane-1-c 31.7 2.3E+02 0.0077 27.9 10.1 128 364-505 82-227 (341)
437 3jy6_A Transcriptional regulat 31.7 2.7E+02 0.0092 25.4 10.1 28 340-380 64-91 (276)
438 1g01_A Endoglucanase; alpha/be 31.6 54 0.0019 32.7 5.5 51 122-176 55-112 (364)
439 1ko7_A HPR kinase/phosphatase; 31.5 49 0.0017 33.2 5.1 70 331-422 71-157 (314)
440 3dz1_A Dihydrodipicolinate syn 31.4 1.7E+02 0.006 28.8 9.2 87 340-439 43-132 (313)
441 2dpr_A CON-T(K7GLA); conantoxi 31.4 34 0.0012 21.6 2.4 17 146-162 2-18 (26)
442 3hgj_A Chromate reductase; TIM 31.3 1.1E+02 0.0038 30.6 7.8 63 282-350 245-322 (349)
443 3l21_A DHDPS, dihydrodipicolin 31.2 1.6E+02 0.0053 29.0 8.7 89 340-439 50-141 (304)
444 1jub_A Dihydroorotate dehydrog 31.2 77 0.0026 30.8 6.4 90 282-375 178-298 (311)
445 1tzj_A ACC deaminase, 1-aminoc 31.1 2.6E+02 0.009 27.2 10.4 127 365-505 83-224 (338)
446 3h75_A Periplasmic sugar-bindi 31.1 1.5E+02 0.0053 28.3 8.6 68 304-382 23-94 (350)
447 3n9k_A Glucan 1,3-beta-glucosi 31.0 42 0.0014 34.6 4.6 51 122-175 75-134 (399)
448 3ceu_A Thiamine phosphate pyro 30.9 1.1E+02 0.0036 28.2 7.0 97 279-416 16-115 (210)
449 2z08_A Universal stress protei 30.9 92 0.0032 25.5 6.1 39 464-503 88-136 (137)
450 1vhk_A Hypothetical protein YQ 30.9 1.6E+02 0.0054 28.6 8.6 121 220-346 36-175 (268)
451 1viz_A PCRB protein homolog; s 30.8 59 0.002 31.4 5.3 49 110-160 8-58 (240)
452 3b4u_A Dihydrodipicolinate syn 30.7 1.5E+02 0.0052 28.9 8.5 91 334-438 31-129 (294)
453 3q94_A Fructose-bisphosphate a 30.1 1.8E+02 0.0063 28.8 8.9 117 304-424 67-188 (288)
454 3ceu_A Thiamine phosphate pyro 30.1 94 0.0032 28.5 6.5 68 277-349 96-175 (210)
455 3o1n_A 3-dehydroquinate dehydr 30.1 2.5E+02 0.0084 27.4 9.8 133 284-433 60-211 (276)
456 2qul_A D-tagatose 3-epimerase; 30.1 1.8E+02 0.0061 26.9 8.6 147 280-430 21-202 (290)
457 2f6u_A GGGPS, (S)-3-O-geranylg 29.8 65 0.0022 31.0 5.4 48 110-157 8-58 (234)
458 2nx9_A Oxaloacetate decarboxyl 29.7 5.1E+02 0.017 27.2 14.2 132 279-429 103-250 (464)
459 2fiq_A Putative tagatose 6-pho 29.6 3.8E+02 0.013 27.9 11.6 80 359-440 61-154 (420)
460 2osx_A Endoglycoceramidase II; 29.6 63 0.0022 33.6 5.8 52 120-175 65-126 (481)
461 4h3d_A 3-dehydroquinate dehydr 29.6 2.4E+02 0.0083 27.1 9.6 128 273-412 25-173 (258)
462 1tzz_A Hypothetical protein L1 29.4 93 0.0032 31.5 6.9 45 126-174 173-217 (392)
463 3guw_A Uncharacterized protein 29.4 47 0.0016 32.1 4.5 96 280-381 15-130 (261)
464 2pgw_A Muconate cycloisomerase 29.4 1.2E+02 0.004 30.6 7.6 87 283-381 211-299 (384)
465 2nx9_A Oxaloacetate decarboxyl 29.3 5.2E+02 0.018 27.1 14.9 188 273-485 26-236 (464)
466 3obe_A Sugar phosphate isomera 29.3 2.8E+02 0.0094 26.6 10.1 99 280-380 40-169 (305)
467 1mjh_A Protein (ATP-binding do 29.3 1.1E+02 0.0038 25.7 6.5 41 464-505 109-159 (162)
468 3m9b_A Proteasome-associated A 29.1 2.1E+02 0.0072 28.0 8.9 83 147-230 78-223 (251)
469 1ivn_A Thioesterase I; hydrola 29.0 79 0.0027 27.5 5.6 51 331-381 52-106 (190)
470 1p4c_A L(+)-mandelate dehydrog 29.0 1.9E+02 0.0066 29.3 9.2 93 301-416 214-308 (380)
471 3prb_A FKBP-type peptidyl-prol 29.0 1.3E+02 0.0044 28.8 7.4 58 189-248 63-128 (231)
472 2rdx_A Mandelate racemase/muco 28.9 1.9E+02 0.0064 29.0 9.0 92 279-386 206-299 (379)
473 3pzt_A Endoglucanase; alpha/be 28.9 63 0.0021 31.9 5.4 52 121-176 69-127 (327)
474 3qc0_A Sugar isomerase; TIM ba 28.8 35 0.0012 31.6 3.3 150 280-432 22-195 (275)
475 1rh9_A Endo-beta-mannanase; en 28.8 1.1E+02 0.0039 29.9 7.3 50 123-175 45-106 (373)
476 3ldv_A Orotidine 5'-phosphate 28.7 63 0.0021 31.5 5.2 73 283-363 169-251 (255)
477 3ipw_A Hydrolase TATD family p 28.4 1E+02 0.0035 30.9 6.9 106 276-382 51-176 (325)
478 1o5k_A DHDPS, dihydrodipicolin 28.3 1.7E+02 0.0057 28.8 8.3 95 334-439 40-138 (306)
479 2bti_A Carbon storage regulato 28.3 80 0.0027 24.6 4.6 29 222-251 9-37 (63)
480 3gv0_A Transcriptional regulat 28.2 2E+02 0.007 26.5 8.7 30 340-381 67-96 (288)
481 3jug_A Beta-mannanase; TIM-bar 28.2 54 0.0018 33.1 4.8 50 124-177 58-110 (345)
482 3dzv_A 4-methyl-5-(beta-hydrox 28.0 76 0.0026 31.1 5.7 54 318-381 42-95 (273)
483 2qdd_A Mandelate racemase/muco 28.0 1.1E+02 0.0038 30.7 7.1 60 109-174 134-197 (378)
484 1ydn_A Hydroxymethylglutaryl-C 27.9 2.8E+02 0.0096 26.7 9.9 52 109-164 72-133 (295)
485 1vpz_A Carbon storage regulato 27.9 79 0.0027 25.4 4.6 30 220-250 17-46 (73)
486 4hci_A Cupredoxin 1; structura 27.9 77 0.0026 25.5 4.9 40 186-225 28-67 (100)
487 1o60_A 2-dehydro-3-deoxyphosph 27.9 3.1E+02 0.011 27.0 10.2 87 304-414 78-165 (292)
488 2rfg_A Dihydrodipicolinate syn 27.8 1.8E+02 0.006 28.5 8.4 95 334-439 28-126 (297)
489 3tnj_A Universal stress protei 27.8 99 0.0034 25.7 5.8 40 465-505 99-147 (150)
490 3ss7_X D-serine dehydratase; t 27.8 2E+02 0.0069 29.7 9.2 115 365-505 174-306 (442)
491 2hk0_A D-psicose 3-epimerase; 27.8 2E+02 0.007 27.2 8.7 150 277-430 37-220 (309)
492 2vc6_A MOSA, dihydrodipicolina 27.7 1.7E+02 0.0057 28.5 8.2 95 334-439 28-126 (292)
493 1vyr_A Pentaerythritol tetrani 27.7 97 0.0033 31.4 6.6 63 282-351 257-328 (364)
494 2oz8_A MLL7089 protein; struct 27.6 1E+02 0.0036 31.1 6.9 62 109-174 132-197 (389)
495 1vjz_A Endoglucanase; TM1752, 27.5 72 0.0025 31.1 5.5 53 120-175 36-98 (341)
496 3aam_A Endonuclease IV, endoiv 27.4 2.1E+02 0.007 26.4 8.5 95 279-378 17-137 (270)
497 4djd_C C/Fe-SP, corrinoid/iron 27.2 1.6E+02 0.0054 31.1 8.2 124 277-416 163-295 (446)
498 2nv1_A Pyridoxal biosynthesis 27.1 68 0.0023 31.4 5.2 37 400-436 223-259 (305)
499 1p4c_A L(+)-mandelate dehydrog 27.1 78 0.0027 32.3 5.8 62 279-349 236-310 (380)
500 1bqc_A Protein (beta-mannanase 27.0 78 0.0027 30.3 5.6 49 124-176 36-87 (302)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=3.7e-126 Score=1022.21 Aligned_cols=418 Identities=40% Similarity=0.623 Sum_probs=394.4
Q ss_pred cccccccccccccccccccccccCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHH
Q 010610 80 RDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (506)
Q Consensus 80 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 159 (506)
-+++++|+|.|+ +.++|..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++
T Consensus 42 ~~~~l~~~~~l~--------~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a 113 (550)
T 3gr4_A 42 ADTFLEHMCRLD--------IDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTA 113 (550)
T ss_dssp CSSHHHHHHTCC--------TTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHhhccC--------CCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456899999887 346778899999999999999999999999999999999999999999999999999999
Q ss_pred HHh------cCCceEEEEeecCCCeeEEeccCC----CeEecCCCEEEEEEecC---CCCceEEEeccchhhhhcCCCCE
Q 010610 160 NAQ------SKDNVIAIMLDTKGPEVRSGDLPQ----PITLTSGQEFTFTIQRG---VGSAECVSVNYDDFVNDVEVGDM 226 (506)
Q Consensus 160 ~~~------~~~~~i~Il~DL~GPkIRtG~l~~----~i~Lk~G~~v~lt~~~~---~~~~~~i~v~~~~l~~~v~~Gd~ 226 (506)
+++ ++ +||+||+||||||||||.+++ +++|++||+|+|+.+.. .++.+.|+++|++|+++|++||+
T Consensus 114 ~~~~~~~~~~~-~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~ 192 (550)
T 3gr4_A 114 TESFASDPILY-RPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSK 192 (550)
T ss_dssp HHTTTTCTTTC-CCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCE
T ss_pred HHhhccccccC-ceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCE
Confidence 998 77 999999999999999999963 79999999999998753 57888999999999999999999
Q ss_pred EEEeCCeEEEEEEEEeCCeEEEEEeeCcEeCCCCccccCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHH
Q 010610 227 LLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHE 306 (506)
Q Consensus 227 IliDDG~i~l~V~~~~~~~v~~~V~~gG~L~s~KgVnlp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~ 306 (506)
||+|||+|.|+|++++++.+.|+|++||.|+++||||+||..+++|+||+||++||+|++++|+|||++|||++++||.+
T Consensus 193 IlidDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~ 272 (550)
T 3gr4_A 193 IYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHE 272 (550)
T ss_dssp EEETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHH
T ss_pred EEEeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhh
Q 010610 307 LKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES 386 (506)
Q Consensus 307 lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeS 386 (506)
++++|++.|.++.||||||+++||+|+|||++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+|||||||
T Consensus 273 ~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeS 352 (550)
T 3gr4_A 273 VRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLES 352 (550)
T ss_dssp HHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGG
T ss_pred HHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cCcCCChHHHHH
Q 010610 387 MIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFA 464 (506)
Q Consensus 387 Mi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~~~~~~~~~ia 464 (506)
|++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.+++...|..+. .....+..+++|
T Consensus 353 Mi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia 432 (550)
T 3gr4_A 353 MIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATA 432 (550)
T ss_dssp GGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHH
Confidence 999999999999999999999999999999999999999999999999999998865533222111 112346789999
Q ss_pred HHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEeCC
Q 010610 465 YHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNE 506 (506)
Q Consensus 465 ~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~pIia~T~~ 506 (506)
.+|+++|++++| +||+||.||+||+++|||||+|||||+|++
T Consensus 433 ~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~ 475 (550)
T 3gr4_A 433 VGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRN 475 (550)
T ss_dssp HHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESC
T ss_pred HHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCC
Confidence 999999999999 999999999999999999999999999986
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.8e-125 Score=1006.95 Aligned_cols=403 Identities=37% Similarity=0.612 Sum_probs=371.0
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHH-hcCCceEEEEeecCCCeeEE
Q 010610 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA-QSKDNVIAIMLDTKGPEVRS 181 (506)
Q Consensus 103 ~~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~-~~~~~~i~Il~DL~GPkIRt 181 (506)
++..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++ +++ +||+||+|||||||||
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~-~~vaIllDl~GPkIR~ 119 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN-CLLGMLLDTKGPEIRT 119 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS-CCCEEEEECCCCCEEB
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCeEEe
Confidence 34678999999999999999999999999999999999999999999999999999998 777 9999999999999999
Q ss_pred eccCC-CeEecCCCEEEEEEe-cCCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeCCC
Q 010610 182 GDLPQ-PITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSR 259 (506)
Q Consensus 182 G~l~~-~i~Lk~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~v~~~V~~gG~L~s~ 259 (506)
|.+++ +++|++||+|+|+.+ ...|+.+.|+++|++|+++|++||+||+|||+|.|+|++++++.+.|+|++||.|+++
T Consensus 120 G~~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~ 199 (520)
T 3khd_A 120 GFLKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGER 199 (520)
T ss_dssp CEEC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSS
T ss_pred eccCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCC
Confidence 99974 579999999999988 5567888999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccCCCCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH
Q 010610 260 RHLNVRGKSATLPSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (506)
Q Consensus 260 KgVnlp~~~~~lp~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~ 338 (506)
||||+||..+++|+||+||++|| +|++++|+|||++|||++++||.++|+++++.|.++.|||||||++||+|+|||++
T Consensus 200 KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~ 279 (520)
T 3khd_A 200 KNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILA 279 (520)
T ss_dssp CEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHH
T ss_pred ceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccc
Q 010610 339 ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (506)
Q Consensus 339 ~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ET 418 (506)
++|||||||||||+|+|+++||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+||
T Consensus 280 ~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgET 359 (520)
T 3khd_A 280 ESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGET 359 (520)
T ss_dssp HSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHH
T ss_pred hCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhC
Q 010610 419 AHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYR 495 (506)
Q Consensus 419 A~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~R 495 (506)
|.|+||+|||++|++||+++|+.+++...|..+. .....+..+++|.+|+++|++++| +||+||.||+||+++||||
T Consensus 360 A~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~R 439 (520)
T 3khd_A 360 AGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYK 439 (520)
T ss_dssp HSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTC
T ss_pred cCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcC
Confidence 9999999999999999999998765432221110 112346789999999999999999 9999999999999999999
Q ss_pred CCCeEEEEeCC
Q 010610 496 PSGTIFAFTNE 506 (506)
Q Consensus 496 P~~pIia~T~~ 506 (506)
|+|||||+|++
T Consensus 440 P~~PIia~T~~ 450 (520)
T 3khd_A 440 PSCTILALSAS 450 (520)
T ss_dssp CSSEEEEEESC
T ss_pred CCCCEEEEcCC
Confidence 99999999986
No 3
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=2e-124 Score=1001.11 Aligned_cols=403 Identities=38% Similarity=0.607 Sum_probs=381.6
Q ss_pred cCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCeeEE
Q 010610 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRS 181 (506)
Q Consensus 102 ~~~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPkIRt 181 (506)
.++..+|||||||||||+|+++|+|++|+++||||||||||||+|++|+++|+++|+++++++ +||+||+|||||||||
T Consensus 14 ~~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~ 92 (499)
T 3hqn_D 14 DPVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG-VNIAIALDTKGPEIRT 92 (499)
T ss_dssp SCCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBB
T ss_pred CCcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CcEEEEEeCCCCEEee
Confidence 367789999999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred eccCC--CeEecCCCEEEEEEec---CCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEEe-CCeEEEEEeeCcE
Q 010610 182 GDLPQ--PITLTSGQEFTFTIQR---GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKT-EDSVKCEVVDGGE 255 (506)
Q Consensus 182 G~l~~--~i~Lk~G~~v~lt~~~---~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~-~~~v~~~V~~gG~ 255 (506)
|.+++ ++ |++||+|+|+.+. ..++.+.|+++|++|+++|++||.||+|||+|.|+|++++ ++.+.|+|++||.
T Consensus 93 g~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~ 171 (499)
T 3hqn_D 93 GQFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHT 171 (499)
T ss_dssp CCBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEE
T ss_pred eccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcE
Confidence 99975 57 9999999999883 4688889999999999999999999999999999999998 6789999999999
Q ss_pred eCCCCccccCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHH
Q 010610 256 LKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHS 335 (506)
Q Consensus 256 L~s~KgVnlp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNlde 335 (506)
|+++||||+||..+++|+||+||++||+|++++|+|||++|||++++|+.+++++|++.|.++.|||||||++||+|+||
T Consensus 172 L~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nlde 251 (499)
T 3hqn_D 172 ISDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDS 251 (499)
T ss_dssp EETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHH
T ss_pred eeCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 336 IITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 336 Il~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
|++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||
T Consensus 252 Il~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLS 331 (499)
T 3hqn_D 252 IIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLS 331 (499)
T ss_dssp HHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred HHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHH
Q 010610 416 GETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLS 492 (506)
Q Consensus 416 ~ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS 492 (506)
+|||.|+||+|||++|++||+++|+.+++...|..+. .....+..+++|.+|+++|++++| +||+||.||+||+++|
T Consensus 332 gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~is 411 (499)
T 3hqn_D 332 GETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVA 411 (499)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHH
Confidence 9999999999999999999999998865532221111 112346789999999999999999 9999999999999999
Q ss_pred hhCCCCeEEEEeCC
Q 010610 493 HYRPSGTIFAFTNE 506 (506)
Q Consensus 493 ~~RP~~pIia~T~~ 506 (506)
||||+|||||+|++
T Consensus 412 r~RP~~pIia~T~~ 425 (499)
T 3hqn_D 412 KYRPNCPIVCVTTR 425 (499)
T ss_dssp HTCCSSCEEEEESC
T ss_pred hhCCCCCEEEEcCC
Confidence 99999999999986
No 4
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.7e-123 Score=1000.12 Aligned_cols=403 Identities=40% Similarity=0.628 Sum_probs=378.0
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHH-hcCCceEEEEeecCCCeeEE
Q 010610 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA-QSKDNVIAIMLDTKGPEVRS 181 (506)
Q Consensus 103 ~~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~-~~~~~~i~Il~DL~GPkIRt 181 (506)
+...+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++ +.+ +||+||+||+||||||
T Consensus 39 ~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~ 117 (526)
T 4drs_A 39 NDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH-STVGIMLDTKGPEIRT 117 (526)
T ss_dssp ---CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-CCCEEEEECCCSCCBB
T ss_pred CCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-CceEEEEECCCCeeEE
Confidence 34467999999999999999999999999999999999999999999999999999987 456 9999999999999999
Q ss_pred eccCC--CeEecCCCEEEEEEec-CCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeCC
Q 010610 182 GDLPQ--PITLTSGQEFTFTIQR-GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKS 258 (506)
Q Consensus 182 G~l~~--~i~Lk~G~~v~lt~~~-~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~v~~~V~~gG~L~s 258 (506)
|.+++ +++|++||+|+|+.+. ..++.+.|+++|++|+++|++||.||+|||+|.|+|++++++.+.|+|.+||.|++
T Consensus 118 g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~ 197 (526)
T 4drs_A 118 GMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGE 197 (526)
T ss_dssp CCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEECS
T ss_pred EecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCccccc
Confidence 99974 6999999999999874 45788899999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccCCCCCCccCHHH-hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC-------CceEEEecCChhhh
Q 010610 259 RRHLNVRGKSATLPSITEKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-------DIHVIVKIESADSI 330 (506)
Q Consensus 259 ~KgVnlp~~~~~lp~ltekD~~d-I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~-------~i~IIaKIEt~~av 330 (506)
+||||+||..+++|+||+||.+| |+||+++|+|||++|||++++||.++|++|++.|. ++.||||||+++|+
T Consensus 198 ~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av 277 (526)
T 4drs_A 198 RKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGV 277 (526)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHH
T ss_pred cccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHH
Confidence 99999999999999999999998 68999999999999999999999999999998763 68999999999999
Q ss_pred hhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcc
Q 010610 331 PNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGAD 410 (506)
Q Consensus 331 eNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D 410 (506)
+|||+|++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+|
T Consensus 278 ~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaD 357 (526)
T 4drs_A 278 INFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSD 357 (526)
T ss_dssp HTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeeccccCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHH
Q 010610 411 AVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFM 487 (506)
Q Consensus 411 ~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~t 487 (506)
|+|||+|||.|+||+|||++|++||+++|+.+++...+..+. ...+.+..+++|.+|+++|++++| +||+||.||+|
T Consensus 358 avMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~t 437 (526)
T 4drs_A 358 CVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNT 437 (526)
T ss_dssp EEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHH
T ss_pred eEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHH
Confidence 999999999999999999999999999999876543222111 112346889999999999999999 99999999999
Q ss_pred HHHHHhhCCCCeEEEEeCC
Q 010610 488 AILLSHYRPSGTIFAFTNE 506 (506)
Q Consensus 488 A~~lS~~RP~~pIia~T~~ 506 (506)
|+++|||||+|||||+|++
T Consensus 438 A~~iSr~RP~~pI~a~T~~ 456 (526)
T 4drs_A 438 ARLISKYRPSQTIIACTAK 456 (526)
T ss_dssp HHHHHHTCCSSEEEEEESC
T ss_pred HHHHHhhCCCCCEEEECCC
Confidence 9999999999999999986
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=2.2e-123 Score=994.52 Aligned_cols=400 Identities=37% Similarity=0.599 Sum_probs=378.9
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhc-CCceEEEEeecCCCeeEEecc
Q 010610 106 VRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQS-KDNVIAIMLDTKGPEVRSGDL 184 (506)
Q Consensus 106 ~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~-~~~~i~Il~DL~GPkIRtG~l 184 (506)
.+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++ + +||+||+||||||||||.+
T Consensus 34 ~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 34 TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE-ARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp TTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT-CCCEEEEECCCCCCBBCC-
T ss_pred ccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC-CceEEEEECCCCEEecccC
Confidence 5799999999999999999999999999999999999999999999999999999998 7 9999999999999999999
Q ss_pred CC--CeEecCCCEEEEEEe-cCCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeCCCCc
Q 010610 185 PQ--PITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRH 261 (506)
Q Consensus 185 ~~--~i~Lk~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~v~~~V~~gG~L~s~Kg 261 (506)
.+ +++|++||+|+|+.+ ...++.+.|+|+|++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++||
T Consensus 113 ~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~Kg 192 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKN 192 (511)
T ss_dssp ----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSCB
T ss_pred CCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCcc
Confidence 74 799999999999988 566888899999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccCCCCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhC
Q 010610 262 LNVRGKSATLPSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITAS 340 (506)
Q Consensus 262 Vnlp~~~~~lp~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~s 340 (506)
||+||..+++|+||+||++|| +|++++|+|||++|||++++||.++|++|++.|.++.|||||||++|++|+|+|++++
T Consensus 193 vNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~s 272 (511)
T 3gg8_A 193 MNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEA 272 (511)
T ss_dssp EECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHC
T ss_pred eecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccC
Q 010610 341 DGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAH 420 (506)
Q Consensus 341 DGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~ 420 (506)
|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.
T Consensus 273 DgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~ 352 (511)
T 3gg8_A 273 DGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETAN 352 (511)
T ss_dssp SCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhccccCCCCCCCCC--cCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCC
Q 010610 421 GKFPLKAVKVMHTVSLRTEATITGGAMPPNLG--QAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPS 497 (506)
Q Consensus 421 G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~ 497 (506)
|+||+|||++|++||+++|+.+++...|..+. .....+..+++|.+|+++|++++| +||++|.||+||+++|||||+
T Consensus 353 G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP~ 432 (511)
T 3gg8_A 353 GEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPM 432 (511)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCC
Confidence 99999999999999999998765432221110 112346789999999999999999 999999999999999999999
Q ss_pred CeEEEEeCC
Q 010610 498 GTIFAFTNE 506 (506)
Q Consensus 498 ~pIia~T~~ 506 (506)
|||||+|++
T Consensus 433 ~PIia~T~~ 441 (511)
T 3gg8_A 433 QPILALSAS 441 (511)
T ss_dssp SCEEEEESC
T ss_pred CCEEEEcCC
Confidence 999999986
No 6
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.1e-122 Score=976.02 Aligned_cols=390 Identities=29% Similarity=0.508 Sum_probs=376.6
Q ss_pred CCCCCceEEEecCCCCCCHH--HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCeeEEe
Q 010610 105 TVRRKTKIVCTIGPSTNTRE--MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSG 182 (506)
Q Consensus 105 ~~~r~tKIi~TiGPss~~~e--~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPkIRtG 182 (506)
..+|||||||||||+|+++| +|++|+++ |||||||||||++++|+++|+++|+++++++ +|++||+||||||||||
T Consensus 12 ~~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g 89 (461)
T 3qtg_A 12 RARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN-RPLAVIVDLKGPSIRVG 89 (461)
T ss_dssp CCSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBCC
T ss_pred hccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CceEEEEeCCCCEEEEC
Confidence 35799999999999999999 99999999 9999999999999999999999999999998 99999999999999999
Q ss_pred ccCCCeEecCCCEEEEEEecCCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeCCCCcc
Q 010610 183 DLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHL 262 (506)
Q Consensus 183 ~l~~~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~v~~~V~~gG~L~s~KgV 262 (506)
.++ +++|++||+|+|+.++..++ +.++++|++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++|||
T Consensus 90 ~~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~Kgv 167 (461)
T 3qtg_A 90 STS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAI 167 (461)
T ss_dssp BCS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCBE
T ss_pred CCC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCce
Confidence 995 69999999999999876666 7899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccCCCCCCccCHHHhH--hhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhC
Q 010610 263 NVRGKSATLPSITEKDWDDIK--FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITAS 340 (506)
Q Consensus 263 nlp~~~~~lp~ltekD~~dI~--~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~s 340 (506)
|+||..+++|+||+||++||+ |++++|+|||++|||++++|+.++|+++++.|.++.|||||||++|++|+|||++++
T Consensus 168 NlPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~s 247 (461)
T 3qtg_A 168 VVEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCS 247 (461)
T ss_dssp EETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTC
T ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhc
Confidence 999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccC
Q 010610 341 DGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAH 420 (506)
Q Consensus 341 DGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~ 420 (506)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.
T Consensus 248 DgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~ 327 (461)
T 3qtg_A 248 DYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETAS 327 (461)
T ss_dssp SEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHT
T ss_pred ccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcCcCCChHHHHHHHHHHHHhhcCceEEEEcCChHHHHHHHhhCCCCeE
Q 010610 421 GKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTI 500 (506)
Q Consensus 421 G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~Iiv~T~sG~tA~~lS~~RP~~pI 500 (506)
|+||+|||++|++||+++|+++.+. ....+..+++|.+|+++|++++|.||++|.||+||+++|||||+|||
T Consensus 328 G~yPveaV~~m~~I~~~aE~~~~~~--------~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG~tA~~vsr~RP~~pI 399 (461)
T 3qtg_A 328 GKYPLAAVSWLSRILMNVEYQIPQS--------PLLQNSRDRFAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVV 399 (461)
T ss_dssp SSCHHHHHHHHHHHHHTCCCCCCCC--------CCCCSHHHHHHHHHHHHHHHHTCEEEEECSSSHHHHHHHTTCCSSCE
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhhc--------cCCCCHHHHHHHHHHHHHHhcCCCEEEECCCcHHHHHHHhhCCCCCE
Confidence 9999999999999999999876542 12346889999999999999999999999999999999999999999
Q ss_pred EEEeCC
Q 010610 501 FAFTNE 506 (506)
Q Consensus 501 ia~T~~ 506 (506)
||+|++
T Consensus 400 ia~T~~ 405 (461)
T 3qtg_A 400 YVGTPN 405 (461)
T ss_dssp EEEESC
T ss_pred EEeCCC
Confidence 999986
No 7
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=5.1e-123 Score=1009.99 Aligned_cols=402 Identities=42% Similarity=0.698 Sum_probs=381.4
Q ss_pred CCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCeeEEec
Q 010610 104 PTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGD 183 (506)
Q Consensus 104 ~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPkIRtG~ 183 (506)
|.++|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++++ +||+||+||||||||||.
T Consensus 19 ~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~-~~vail~Dl~GPkiR~g~ 97 (606)
T 3t05_A 19 SHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD-KIVAILLDTKGPEIRTHN 97 (606)
T ss_dssp ---CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCC
T ss_pred cccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCEEEeec
Confidence 4558999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred cC-CCeEecCCCEEEEEEecCCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEE--EEEeCCeEEEEEeeCcEeCCCC
Q 010610 184 LP-QPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV--KSKTEDSVKCEVVDGGELKSRR 260 (506)
Q Consensus 184 l~-~~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V--~~~~~~~v~~~V~~gG~L~s~K 260 (506)
++ ++++|++||+|+|+.++..++.+.|+++|++|+++|++||+||+|||+|.|+| ++++++.+.|+|++||.|+++|
T Consensus 98 ~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~K 177 (606)
T 3t05_A 98 MKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKK 177 (606)
T ss_dssp BTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEETTC
T ss_pred CCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeCCc
Confidence 97 58999999999999988778889999999999999999999999999999999 7788999999999999999999
Q ss_pred ccccCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhC
Q 010610 261 HLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITAS 340 (506)
Q Consensus 261 gVnlp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~s 340 (506)
|||+||..+++|+|||||++||+|++++|+|||++|||++++||.++|+++.+.|.++.||||||+++|++|||||++++
T Consensus 178 gvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~s 257 (606)
T 3t05_A 178 GVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVS 257 (606)
T ss_dssp BEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHC
T ss_pred eEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccC
Q 010610 341 DGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAH 420 (506)
Q Consensus 341 DGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~ 420 (506)
|||||||||||+|+|+++||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.
T Consensus 258 DGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~ 337 (606)
T 3t05_A 258 DGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAA 337 (606)
T ss_dssp SCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHS
T ss_pred CEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCe
Q 010610 421 GKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGT 499 (506)
Q Consensus 421 G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~p 499 (506)
|+||+|||++|++||+++|+++++...|.........+..+++|.+|+++|++++| +||+||.||+||+++|||||+||
T Consensus 338 G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~p 417 (606)
T 3t05_A 338 GLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSD 417 (606)
T ss_dssp CSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSE
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCCC
Confidence 99999999999999999999875533222111111346789999999999999999 99999999999999999999999
Q ss_pred EEEEeCC
Q 010610 500 IFAFTNE 506 (506)
Q Consensus 500 Iia~T~~ 506 (506)
|||+|++
T Consensus 418 Iia~t~~ 424 (606)
T 3t05_A 418 IIAVTPS 424 (606)
T ss_dssp EEEEESC
T ss_pred EEEEcCC
Confidence 9999986
No 8
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=5.3e-122 Score=978.99 Aligned_cols=397 Identities=43% Similarity=0.685 Sum_probs=362.2
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCeeEEeccC-
Q 010610 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLP- 185 (506)
Q Consensus 107 ~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPkIRtG~l~- 185 (506)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++|++||||||||||.++
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 4899999999999999999999999999999999999999999999999999999999 99999999999999999997
Q ss_pred -CCeEecCCCEEEEEEe-cCCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeCCCCccc
Q 010610 186 -QPITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLN 263 (506)
Q Consensus 186 -~~i~Lk~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~v~~~V~~gG~L~s~KgVn 263 (506)
++++|++||+|+|+.+ ...++.+.++++|++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++||||
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 4799999999999988 34678889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhc-CCCceEEEecCChhhhhhHHHHHHhCCE
Q 010610 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC-GADIHVIVKIESADSIPNLHSIITASDG 342 (506)
Q Consensus 264 lp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~-~~~i~IIaKIEt~~aveNldeIl~~sDG 342 (506)
+||..+++|+||++|.+||+|++++|+|||++|||++++|++++++++.+. |.++.||+||||++|++|+|||++++||
T Consensus 160 lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 999999999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred EEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCC
Q 010610 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~ 422 (506)
|||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccccCCCCCCCCCcCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEE
Q 010610 423 FPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIF 501 (506)
Q Consensus 423 yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~pIi 501 (506)
||+|||++|++||+++|+.+++...+..... ..+..+++|.+|+++|++++| +||+||.||+||+++|||||+||||
T Consensus 320 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~ 397 (470)
T 1e0t_A 320 YPLEAVSIMATICERTDRVMNSRLEFNNDNR--KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATIL 397 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEE
T ss_pred CHHHHHHHHHHHHHHHHhhhhhhHHHhhhcc--ccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEE
Confidence 9999999999999999997665433322111 135689999999999999999 9999999999999999999999999
Q ss_pred EEeCC
Q 010610 502 AFTNE 506 (506)
Q Consensus 502 a~T~~ 506 (506)
|+|++
T Consensus 398 a~t~~ 402 (470)
T 1e0t_A 398 ALTTN 402 (470)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 99986
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=8.8e-121 Score=993.40 Aligned_cols=399 Identities=42% Similarity=0.692 Sum_probs=378.4
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCeeEEeccCC
Q 010610 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQ 186 (506)
Q Consensus 107 ~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPkIRtG~l~~ 186 (506)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++||+||||||||||.+++
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG-RTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CceEEEEeCCCCEEEEeccCC
Confidence 6899999999999999999999999999999999999999999999999999999998 999999999999999999984
Q ss_pred -CeEecCCCEEEEEEecCCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEEEEEE--eCCeEEEEEeeCcEeCCCCccc
Q 010610 187 -PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSK--TEDSVKCEVVDGGELKSRRHLN 263 (506)
Q Consensus 187 -~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~--~~~~v~~~V~~gG~L~s~KgVn 263 (506)
+++|++||+|+|+.++..++.+.++++|++|+++|++||+||+|||+|.|+|+++ +++.+.|+|++||.|++|||||
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgvn 160 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVN 160 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEE
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceee
Confidence 7999999999999986668888999999999999999999999999999999999 8999999999999999999999
Q ss_pred cCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC-CceEEEecCChhhhhhHHHHHHhCCE
Q 010610 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIESADSIPNLHSIITASDG 342 (506)
Q Consensus 264 lp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~-~i~IIaKIEt~~aveNldeIl~~sDG 342 (506)
+||..+++|+||+||.+||+|++++|+|||++|||++++|++++++++++.|. ++.||+|||+++|++|||||++++||
T Consensus 161 lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 161 VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999885 89999999999999999999999999
Q ss_pred EEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCC
Q 010610 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~ 422 (506)
|||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccccCCCCCCCCCcCcCCChHHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEE
Q 010610 423 FPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIF 501 (506)
Q Consensus 423 yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~pIi 501 (506)
||+|||++|++||+++|+.+++...+.........+..+++|.+|+++|++++| +||+||.||+||+++|||||+||||
T Consensus 321 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~ 400 (587)
T 2e28_A 321 YPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPII 400 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEE
T ss_pred CHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEE
Confidence 999999999999999999754311111000111135689999999999999999 9999999999999999999999999
Q ss_pred EEeCC
Q 010610 502 AFTNE 506 (506)
Q Consensus 502 a~T~~ 506 (506)
|+|++
T Consensus 401 a~t~~ 405 (587)
T 2e28_A 401 AVTSN 405 (587)
T ss_dssp EEESS
T ss_pred EECCC
Confidence 99986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=1.5e-117 Score=951.39 Aligned_cols=415 Identities=35% Similarity=0.561 Sum_probs=383.3
Q ss_pred ccccccccccccccccccccCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHh
Q 010610 83 EFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQ 162 (506)
Q Consensus 83 ~~~~~~~~~~~~~~s~~~~~~~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~ 162 (506)
+++|++.++.. ++ ..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++
T Consensus 3 ~~~~~~~~~~~--------~~-~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~ 73 (500)
T 1a3w_A 3 RLERLTSLNVV--------AG-SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEEL 73 (500)
T ss_dssp HHHHHHCC--------------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcCcc--------cc-ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 56777766532 11 4579999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEeecCCCeeEEeccCC--CeEecCCCEEEEEEec---CCCCceEEEeccchhhhhcCCCCEEEEeCCeEEEE
Q 010610 163 SKDNVIAIMLDTKGPEVRSGDLPQ--PITLTSGQEFTFTIQR---GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLL 237 (506)
Q Consensus 163 ~~~~~i~Il~DL~GPkIRtG~l~~--~i~Lk~G~~v~lt~~~---~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~ 237 (506)
++++||+|++||||||||||.+++ +++|++||+|+|+.+. ..++.+.|+++|++|+++|++||.||+|||+|.|+
T Consensus 74 ~~~~~v~il~Dl~GPkiR~g~~~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~ 153 (500)
T 1a3w_A 74 YPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQ 153 (500)
T ss_dssp CCSSCCCCEEECCCSCCBBCCCSSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEE
T ss_pred cCCcceEEEEeCCCCEEEEeecCCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEE
Confidence 876999999999999999999974 6999999999999875 35788899999999999999999999999999999
Q ss_pred EEEE-eCCeEEEEEeeCcEeCCCCccccCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC
Q 010610 238 VKSK-TEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA 316 (506)
Q Consensus 238 V~~~-~~~~v~~~V~~gG~L~s~KgVnlp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~ 316 (506)
|+++ +++.+.|+|++||.|++|||||+||..+++|+||++|.+||+|++++|+|+|++|||++++|++++++++.+.|.
T Consensus 154 V~~~~~~~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~ 233 (500)
T 1a3w_A 154 VLEVVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGK 233 (500)
T ss_dssp CCBCCC--CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHT
T ss_pred EEEEccCCeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChh
Q 010610 317 DIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRA 396 (506)
Q Consensus 317 ~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRA 396 (506)
++.||+||||++|++|+|||++++|||||||||||+|+|.++|+.+|++|+.+|+++|||+|+||||||||+.+|.||||
T Consensus 234 ~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptra 313 (500)
T 1a3w_A 234 DVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRA 313 (500)
T ss_dssp TSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHH
T ss_pred CcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCc--CcCCChHHHHHHHHHHHHhhc
Q 010610 397 EVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQ--AFKNHMSEMFAYHATMMSNTL 474 (506)
Q Consensus 397 Ev~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~~ia~~av~~A~~~ 474 (506)
|++|++||+.+|+|++|||+||+.|+||+|||++|++||+++|+.+++...+..+.. ....+..+++|.+|+++|+++
T Consensus 314 Evsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~ 393 (500)
T 1a3w_A 314 EVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQ 393 (500)
T ss_dssp HHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999997543221111111 112356899999999999999
Q ss_pred Cc-eEEEEcCChHHHHHHHhhCCCCeEEEEeCC
Q 010610 475 GT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNE 506 (506)
Q Consensus 475 ~a-~Iiv~T~sG~tA~~lS~~RP~~pIia~T~~ 506 (506)
+| +||+||.||+||+++|||||+|||||+|++
T Consensus 394 ~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~ 426 (500)
T 1a3w_A 394 KAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRC 426 (500)
T ss_dssp TCSCEEEECSSSHHHHHHHHTCCSSCEEEEESC
T ss_pred CCCEEEEECCCchHHHHHHhhCCCCCEEEEcCC
Confidence 99 999999999999999999999999999986
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.77 E-value=2.2e-19 Score=184.77 Aligned_cols=149 Identities=12% Similarity=0.108 Sum_probs=130.1
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhc--------------------------------CCCceEEEecCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC--------------------------------GADIHVIVKIES 326 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~--------------------------------~~~i~IIaKIEt 326 (506)
..+|+++++.|+++|++|||++++|+++++++++.. +.++.|+++|||
T Consensus 107 ~~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 107 EVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 368999999999999999999999999999988531 124789999999
Q ss_pred hhhhhhHHHHHHh--CCEEEEcCCCcccC--------CCC---CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCC
Q 010610 327 ADSIPNLHSIITA--SDGAMVARGDLGAE--------LPI---EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTP 393 (506)
Q Consensus 327 ~~aveNldeIl~~--sDGImIaRGDLgve--------lg~---e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~P 393 (506)
++|++|+++|+++ +|++|||++||+.+ +|. +.|..++++|+.+|+++|||++..+ ..|
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~ 257 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV 257 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH
Confidence 9999999999975 89999999999999 887 6799999999999999999997654 222
Q ss_pred ChhhcccHHHHHHhCcceeEeeccccC--CCCHHHHHHHHHHHHHHHhccc
Q 010610 394 TRAEVSDIAIAVREGADAVMLSGETAH--GKFPLKAVKVMHTVSLRTEATI 442 (506)
Q Consensus 394 tRAEv~Dvanav~dG~D~vmLs~ETA~--G~yPveaV~~m~~I~~~aE~~~ 442 (506)
.++.+++..|+|+++++.++.. +.| .+.|+++++|+.++|...
T Consensus 258 -----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~ 302 (339)
T 1izc_A 258 -----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQG 302 (339)
T ss_dssp -----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC--
T ss_pred -----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 5788999999999999998877 667 799999999999888753
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.72 E-value=4.3e-19 Score=176.70 Aligned_cols=126 Identities=25% Similarity=0.308 Sum_probs=106.1
Q ss_pred CHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHh---------------------------cCCCceEEEecCChhhh
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS---------------------------CGADIHVIVKIESADSI 330 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~---------------------------~~~~i~IIaKIEt~~av 330 (506)
|..+|+++++.|+|+|++|||++++|++++.+.++. .+.++.|+++|||++|+
T Consensus 79 ~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 79 SKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 468899999999999999999999999999887631 12348899999999999
Q ss_pred hhHHHHHHh--CCEEEEcCCCcccCCCC------CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH
Q 010610 331 PNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA 402 (506)
Q Consensus 331 eNldeIl~~--sDGImIaRGDLgvelg~------e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva 402 (506)
+|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ . .| ....
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~-------~--d~-----~~a~ 224 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA-------V--AP-----DMAQ 224 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC-------S--SH-----HHHH
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec-------C--CH-----HHHH
Confidence 999999988 89999999999999997 3688999999999999999998742 1 22 2345
Q ss_pred HHHHhCcceeEeecc
Q 010610 403 IAVREGADAVMLSGE 417 (506)
Q Consensus 403 nav~dG~D~vmLs~E 417 (506)
.++..|++.+..+.+
T Consensus 225 ~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 225 QCLAWGANFVAVGVD 239 (267)
T ss_dssp HHHHTTCCEEEEEEH
T ss_pred HHHHCCCCEEEEchH
Confidence 678888888877644
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.70 E-value=7.2e-19 Score=177.12 Aligned_cols=128 Identities=24% Similarity=0.254 Sum_probs=106.8
Q ss_pred ccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHH---------------------------hcCCCceEEEecCChh
Q 010610 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK---------------------------SCGADIHVIVKIESAD 328 (506)
Q Consensus 276 ekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~---------------------------~~~~~i~IIaKIEt~~ 328 (506)
+.|..||+++++.|+|+|++|||++++|++++.+.++ ..+.++.|++||||++
T Consensus 98 ~~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~ 177 (287)
T 2v5j_A 98 WNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHH
Confidence 3456699999999999999999999999999987653 1223588999999999
Q ss_pred hhhhHHHHHHh--CCEEEEcCCCcccCCCC------CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc
Q 010610 329 SIPNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD 400 (506)
Q Consensus 329 aveNldeIl~~--sDGImIaRGDLgvelg~------e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D 400 (506)
|++|+|+|+++ +|+++||++||+.++|. +.|..++++++.+|+++|||+++.+ ..|. .
T Consensus 178 av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~---------~d~~-----~ 243 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI---------ANEQ-----L 243 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC---------CCHH-----H
T ss_pred HHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec---------CCHH-----H
Confidence 99999999985 89999999999999996 4689999999999999999998742 2332 3
Q ss_pred HHHHHHhCcceeEeecc
Q 010610 401 IAIAVREGADAVMLSGE 417 (506)
Q Consensus 401 vanav~dG~D~vmLs~E 417 (506)
...++..|++.+..+.+
T Consensus 244 a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 244 AKRYLELGALFVAVGVD 260 (287)
T ss_dssp HHHHHHTTCSEEEEEEH
T ss_pred HHHHHHhCCCEEEECcH
Confidence 45677888888877754
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.68 E-value=1.1e-16 Score=159.04 Aligned_cols=127 Identities=20% Similarity=0.280 Sum_probs=109.5
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHH---------------------------hcCCCceEEEecCChhhhh
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK---------------------------SCGADIHVIVKIESADSIP 331 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~---------------------------~~~~~i~IIaKIEt~~ave 331 (506)
..||+++++.|+|+|++|||++++|++++.+.++ ..+.++.++++|||++|++
T Consensus 78 ~~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~ 157 (261)
T 3qz6_A 78 RAHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVE 157 (261)
T ss_dssp HHHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHH
Confidence 3689999999999999999999999999988763 2245789999999999999
Q ss_pred hHHHHHHh--CCEEEEcCCCcccCCCCC------cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH
Q 010610 332 NLHSIITA--SDGAMVARGDLGAELPIE------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI 403 (506)
Q Consensus 332 NldeIl~~--sDGImIaRGDLgvelg~e------~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan 403 (506)
|+++|+++ .|+++||++||+.++|.. .+..++++++.+|+++|||+++.+ ..|..++ ..
T Consensus 158 ~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~~ 224 (261)
T 3qz6_A 158 DIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----GW 224 (261)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----HH
T ss_pred HHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----HH
Confidence 99999965 899999999999999874 699999999999999999999874 2444431 46
Q ss_pred HHHhCcceeEeeccc
Q 010610 404 AVREGADAVMLSGET 418 (506)
Q Consensus 404 av~dG~D~vmLs~ET 418 (506)
.+..|++.+.++.++
T Consensus 225 ~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 225 AVERGAQMLLWSGDV 239 (261)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHCCCCEEEEhhHH
Confidence 789999999998774
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.66 E-value=1.7e-16 Score=156.85 Aligned_cols=128 Identities=22% Similarity=0.266 Sum_probs=108.9
Q ss_pred cCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHH--------------------------hcCCCceEEEecCChhhh
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK--------------------------SCGADIHVIVKIESADSI 330 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~--------------------------~~~~~i~IIaKIEt~~av 330 (506)
.|..+|+++++.|+|+|++|||++++|++++.+.++ ..+.++.++++|||++|+
T Consensus 79 ~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av 158 (256)
T 1dxe_A 79 NEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGV 158 (256)
T ss_dssp SCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHH
T ss_pred CCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHH
Confidence 456679999999999999999999999999988774 124578999999999999
Q ss_pred hhHHHHHHh--CCEEEEcCCCcccCCCC------CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH
Q 010610 331 PNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA 402 (506)
Q Consensus 331 eNldeIl~~--sDGImIaRGDLgvelg~------e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva 402 (506)
+|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| .+..
T Consensus 159 ~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d~-----~~~~ 224 (256)
T 1dxe_A 159 DNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PVE-----ADAR 224 (256)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CSH-----HHHH
T ss_pred HhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CCH-----HHHH
Confidence 999999984 89999999999999997 3699999999999999999998743 122 2456
Q ss_pred HHHHhCcceeEeeccc
Q 010610 403 IAVREGADAVMLSGET 418 (506)
Q Consensus 403 nav~dG~D~vmLs~ET 418 (506)
.++..|++.+..+.++
T Consensus 225 ~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 225 RYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHTTCCEEEEEEHH
T ss_pred HHHHcCCCEEEechHH
Confidence 7889999998887553
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.59 E-value=1.5e-15 Score=151.99 Aligned_cols=136 Identities=13% Similarity=0.109 Sum_probs=111.3
Q ss_pred CCCCCC-ccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH--hCCEEEEc
Q 010610 270 TLPSIT-EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT--ASDGAMVA 346 (506)
Q Consensus 270 ~lp~lt-ekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~--~sDGImIa 346 (506)
.++.++ +++.+||++.++ |+|+|++|||++++|++.+++++...|.++.++++|||++|+.|+++|++ .+|+++||
T Consensus 74 Rv~~~~~~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG 152 (284)
T 1sgj_A 74 RVNALHSPYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFG 152 (284)
T ss_dssp ECCCTTSTTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEEC
T ss_pred EeCCCCCHhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEEC
Confidence 334444 678889999999 99999999999999999999999877778999999999999999999996 37999999
Q ss_pred CCCcccCCCC------CcHHHHHHHHHHHHHHcCCcEEEE--ehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 347 RGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVA--TNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 347 RGDLgvelg~------e~V~~~Qk~II~~c~~~GkPvivA--TqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
++||+.++|. +.+..++++++.+|+++|||++.. +.+ .-...-..+...+...|+|+-+.
T Consensus 153 ~~DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~v~~~~--------~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 153 AEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIVVTAL--------NDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHHHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEECCCCCC--------SCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeCCcCCC--------CCHHHHHHHHHHHHhCCCCcccc
Confidence 9999999997 579999999999999999998532 110 00000014466788999986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.32 E-value=1.7e-12 Score=132.77 Aligned_cols=134 Identities=16% Similarity=0.157 Sum_probs=109.4
Q ss_pred CCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHh-------c----CCCceEEEecCChhhhhhHHHHHHh
Q 010610 271 LPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------C----GADIHVIVKIESADSIPNLHSIITA 339 (506)
Q Consensus 271 lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~-------~----~~~i~IIaKIEt~~aveNldeIl~~ 339 (506)
-|.+-+.|.+.|..+++.|.+.|++|+|+++++++++++++.. . +.++.++++|||+.|+.|+|+|+++
T Consensus 117 ~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~ 196 (324)
T 2xz9_A 117 RPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE 196 (324)
T ss_dssp CHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT
T ss_pred chhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 3555566778888999999999999999999998888887742 1 2368999999999999999999999
Q ss_pred CCEEEEcCCCccc-CCC---------------CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH
Q 010610 340 SDGAMVARGDLGA-ELP---------------IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI 403 (506)
Q Consensus 340 sDGImIaRGDLgv-elg---------------~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan 403 (506)
+|+++||..||+. .++ .+.|..+.++++.+|+++|||+++++++- ..| ..+..
T Consensus 197 vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~------~dp-----~~~~~ 265 (324)
T 2xz9_A 197 VDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA------GDP-----LAAVI 265 (324)
T ss_dssp CSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCH-----HHHHH
T ss_pred CcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC------CCH-----HHHHH
Confidence 9999999999995 344 23588899999999999999999987642 122 23567
Q ss_pred HHHhCcceeEee
Q 010610 404 AVREGADAVMLS 415 (506)
Q Consensus 404 av~dG~D~vmLs 415 (506)
++..|+|.+..+
T Consensus 266 l~~lG~~~~si~ 277 (324)
T 2xz9_A 266 LLGLGLDEFSMS 277 (324)
T ss_dssp HHHHTCCEEEEC
T ss_pred HHHCCCCEEEEC
Confidence 889999996554
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.18 E-value=2.5e-11 Score=123.80 Aligned_cols=130 Identities=22% Similarity=0.273 Sum_probs=105.3
Q ss_pred CccCHHHhHhhHhcCC--cEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh---CCEEEEcCCC
Q 010610 275 TEKDWDDIKFGVDNKV--DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---SDGAMVARGD 349 (506)
Q Consensus 275 tekD~~dI~~al~~gv--D~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---sDGImIaRGD 349 (506)
|++..+||+..++.|. |+|.+|+|++++|++.+.+++...+.++.++++|||++|+.|+++|++. .|++++|..|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 4556788998898885 9999999999999999999997777789999999999999999999983 6899999999
Q ss_pred cccCCCCC----cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhh----cccHHHHHHhCcceeEe
Q 010610 350 LGAELPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAE----VSDIAIAVREGADAVML 414 (506)
Q Consensus 350 Lgvelg~e----~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAE----v~Dvanav~dG~D~vmL 414 (506)
|..++|.. .+..+..+++.+|+++|++++-. +.+.... ..+...+...|+++-+.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~----------v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPAIDA----------PFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC----------CCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec----------cccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99999875 47788899999999999998532 1111111 34567788899987554
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.12 E-value=7.9e-11 Score=117.53 Aligned_cols=124 Identities=19% Similarity=0.105 Sum_probs=98.6
Q ss_pred ccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEcCCCcccC
Q 010610 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAE 353 (506)
Q Consensus 276 ekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIaRGDLgve 353 (506)
++-.+||+..++.|+|+|.+|+|+++++++.+. .+.++++|||++|+.|+++|+.. .||+++|+.||+.+
T Consensus 71 ~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~ 142 (273)
T 1u5h_A 71 ADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp HHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHH
Confidence 345588999999999999999999999998773 68899999999999999999964 58999999999999
Q ss_pred CCCC-----------cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChh-hcccHHHHHHhCcceeEe
Q 010610 354 LPIE-----------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRA-EVSDIAIAVREGADAVML 414 (506)
Q Consensus 354 lg~e-----------~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRA-Ev~Dvanav~dG~D~vmL 414 (506)
+|.. .+..+..+++.+|+++|++++... .......+ =..+...+...|+|+-+.
T Consensus 143 lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v-------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAV-------HLDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECC-------CSCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCC-------cCCCCCHHHHHHHHHHHHhCCCCceee
Confidence 9863 267788899999999999985321 00001110 124577788999998776
No 20
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.11 E-value=7.6e-11 Score=133.28 Aligned_cols=132 Identities=19% Similarity=0.204 Sum_probs=111.1
Q ss_pred CCccCHHHhHhhHh-cC--CcEEEEccCCCHHHHHHHHHHHHhcCC----C-ceEEEecCChhhhhhHHHHHHhCCEEEE
Q 010610 274 ITEKDWDDIKFGVD-NK--VDFYAVSFVKDAQVVHELKNYLKSCGA----D-IHVIVKIESADSIPNLHSIITASDGAMV 345 (506)
Q Consensus 274 ltekD~~dI~~al~-~g--vD~IalSfV~saedV~~lr~~l~~~~~----~-i~IIaKIEt~~aveNldeIl~~sDGImI 345 (506)
+.+.+.+.|..+.+ .| .+.|++|||+++++++.+++.+++.|. + +.++++||++.|+.|+|+|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 33446667778888 68 799999999999999999999987653 3 8899999999999999999999999999
Q ss_pred cCCCcccC-CCCC---------------cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCc
Q 010610 346 ARGDLGAE-LPIE---------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGA 409 (506)
Q Consensus 346 aRGDLgve-lg~e---------------~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~ 409 (506)
|..||+.. +|.. .|..+.++++.+|+++|||++++.++--. .|. .+..++..|+
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp~-----~~~~~~~~G~ 771 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSD-----HPD-----FAKWLVEEGI 771 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CHH-----HHHHHHHHTC
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCC-----CHH-----HHHHHHHCCC
Confidence 99999987 7753 48889999999999999999999876420 121 2567889999
Q ss_pred ceeEee
Q 010610 410 DAVMLS 415 (506)
Q Consensus 410 D~vmLs 415 (506)
|.+.++
T Consensus 772 ~~~s~~ 777 (794)
T 2ols_A 772 ESVSLN 777 (794)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 999886
No 21
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.06 E-value=1e-10 Score=119.95 Aligned_cols=130 Identities=15% Similarity=0.103 Sum_probs=101.0
Q ss_pred CccCHHHhHhhHhc---CCcEEEEccCCCHHHHHHHHHHHHhc----C--CCceEEEecCChhhhhhHHHHHHh--CCEE
Q 010610 275 TEKDWDDIKFGVDN---KVDFYAVSFVKDAQVVHELKNYLKSC----G--ADIHVIVKIESADSIPNLHSIITA--SDGA 343 (506)
Q Consensus 275 tekD~~dI~~al~~---gvD~IalSfV~saedV~~lr~~l~~~----~--~~i~IIaKIEt~~aveNldeIl~~--sDGI 343 (506)
|++-.+||...++. |+|+|.+|+|++++|++.+.+++... | ..+.++++|||+.|+.|+++|++. .|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 44556788877775 99999999999999999999888643 2 368899999999999999999954 6899
Q ss_pred EEcCCCcccCCCCC---------------cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChh--h--cccHHHH
Q 010610 344 MVARGDLGAELPIE---------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRA--E--VSDIAIA 404 (506)
Q Consensus 344 mIaRGDLgvelg~e---------------~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRA--E--v~Dvana 404 (506)
++|..||..++|.. .+..+..+++.+|+++|+++|-. +.+... | -.+...+
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~----------v~~d~~D~~gl~~~~~~~ 243 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN----------VCLNLKDAEVIASDACRA 243 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC----------CCSCSSCHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC----------CcccccCHHHHHHHHHHH
Confidence 99999999998752 26678889999999999998542 111111 1 1345567
Q ss_pred H-HhCcceeEe
Q 010610 405 V-REGADAVML 414 (506)
Q Consensus 405 v-~dG~D~vmL 414 (506)
. ..|+|+-+.
T Consensus 244 ~~~lGf~Gk~~ 254 (332)
T 3qqw_A 244 RNEFGFLRMWS 254 (332)
T ss_dssp HHHHCCCEEEE
T ss_pred HHhCCCCcccc
Confidence 6 789997654
No 22
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.01 E-value=4.8e-10 Score=122.54 Aligned_cols=133 Identities=14% Similarity=0.119 Sum_probs=107.7
Q ss_pred CCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHh-------cC----CCceEEEecCChhhhhhHHHHHHhC
Q 010610 272 PSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------CG----ADIHVIVKIESADSIPNLHSIITAS 340 (506)
Q Consensus 272 p~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~-------~~----~~i~IIaKIEt~~aveNldeIl~~s 340 (506)
|.+-+-+.+.|..+.+.|...|++|||.++++++.+++++.+ .| .++.+.++||++.|+.++|+|++.+
T Consensus 367 p~if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 446 (575)
T 2hwg_A 367 REILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEV 446 (575)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 333344456788888899999999999999998888887742 23 3688999999999999999999999
Q ss_pred CEEEEcCCCccc----------CCCC------CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHH
Q 010610 341 DGAMVARGDLGA----------ELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (506)
Q Consensus 341 DGImIaRGDLgv----------elg~------e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvana 404 (506)
|++.||..||.. .++. +.|..+.++++.+|+++|||++++.++- ..|. .+..+
T Consensus 447 Df~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~a------gdp~-----~~~~l 515 (575)
T 2hwg_A 447 DFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELA------GDER-----ATLLL 515 (575)
T ss_dssp SEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTT------TCTT-----THHHH
T ss_pred CEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCC------CCHH-----HHHHH
Confidence 999999999988 5442 3688899999999999999999987522 2342 35678
Q ss_pred HHhCcceeEee
Q 010610 405 VREGADAVMLS 415 (506)
Q Consensus 405 v~dG~D~vmLs 415 (506)
+..|.|.+..+
T Consensus 516 ~~lG~~~~S~~ 526 (575)
T 2hwg_A 516 LGMGLDEFSMS 526 (575)
T ss_dssp HHTTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 99999996665
No 23
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.01 E-value=4.3e-10 Score=122.86 Aligned_cols=127 Identities=17% Similarity=0.109 Sum_probs=104.3
Q ss_pred CHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHh-------cC----CCceEEEecCChhhhhhHHHHHHhCCEEEEc
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------CG----ADIHVIVKIESADSIPNLHSIITASDGAMVA 346 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~-------~~----~~i~IIaKIEt~~aveNldeIl~~sDGImIa 346 (506)
+.+.|..+.+.|...|++|||.++++++.+++++.+ .| .++.+.++||++.|+.++|+|++++|++.||
T Consensus 375 QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siG 454 (572)
T 2wqd_A 375 QLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIG 454 (572)
T ss_dssp HHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEEC
Confidence 346678888899999999999999999988877631 12 3688999999999999999999999999999
Q ss_pred CCCcccC-CC---------------CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcc
Q 010610 347 RGDLGAE-LP---------------IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGAD 410 (506)
Q Consensus 347 RGDLgve-lg---------------~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D 410 (506)
..||..- ++ .+.|..+.++++.+|+++|||++++.++- ..|.- +..++..|+|
T Consensus 455 tNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~-----~~~l~~lG~~ 523 (572)
T 2wqd_A 455 TNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETA-----IPLLLGLGLD 523 (572)
T ss_dssp HHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTT-----HHHHHHHTCC
T ss_pred HHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHH-----HHHHHHCCCC
Confidence 9999832 22 13588889999999999999999987633 23433 5578999999
Q ss_pred eeEee
Q 010610 411 AVMLS 415 (506)
Q Consensus 411 ~vmLs 415 (506)
.+..+
T Consensus 524 ~~S~~ 528 (572)
T 2wqd_A 524 EFSMS 528 (572)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98876
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.98 E-value=6.1e-10 Score=114.53 Aligned_cols=104 Identities=13% Similarity=0.199 Sum_probs=86.2
Q ss_pred ccCHHHhHhhHhc---CCcEEEEccCCCHHHHHHHHHHHHhc----C--CCceEEEecCChhhhhhHHHHHHh--CCEEE
Q 010610 276 EKDWDDIKFGVDN---KVDFYAVSFVKDAQVVHELKNYLKSC----G--ADIHVIVKIESADSIPNLHSIITA--SDGAM 344 (506)
Q Consensus 276 ekD~~dI~~al~~---gvD~IalSfV~saedV~~lr~~l~~~----~--~~i~IIaKIEt~~aveNldeIl~~--sDGIm 344 (506)
++-.+||...++. |+|+|++|+|++++|+..+.+++.+. | ..+.++++|||+.|+.|+++|++. .|+++
T Consensus 94 ~~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~ 173 (339)
T 3r4i_A 94 AHWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALS 173 (339)
T ss_dssp TTHHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEE
T ss_pred cHHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEE
Confidence 3456777777664 89999999999999999999888642 2 368899999999999999999954 68999
Q ss_pred EcCCCcccCCCCC---------------cHHHHHHHHHHHHHHcCCcEEE
Q 010610 345 VARGDLGAELPIE---------------EVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 345 IaRGDLgvelg~e---------------~V~~~Qk~II~~c~~~GkPviv 379 (506)
+|..||..+++.. .+..+..+++.+|+++|++++.
T Consensus 174 ~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id 223 (339)
T 3r4i_A 174 FGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSH 223 (339)
T ss_dssp ECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999998752 1567888999999999999853
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.79 E-value=9.1e-09 Score=108.49 Aligned_cols=133 Identities=11% Similarity=0.105 Sum_probs=103.7
Q ss_pred Ccc-CHHHhHhhHh------cCCcEEEEccCCCHHHHHHHHHHHHhc----C---CCceEEEecCChhh---hhhHHHHH
Q 010610 275 TEK-DWDDIKFGVD------NKVDFYAVSFVKDAQVVHELKNYLKSC----G---ADIHVIVKIESADS---IPNLHSII 337 (506)
Q Consensus 275 tek-D~~dI~~al~------~gvD~IalSfV~saedV~~lr~~l~~~----~---~~i~IIaKIEt~~a---veNldeIl 337 (506)
|++ ..+||...+. .++|+|.+|+|++++++..+.+++... | ..+.+++.|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 455 5778887776 789999999999999999998887532 2 26889999999999 99999999
Q ss_pred HhC-------CEEEEcCCCcccCCCCC-------cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCCh-hhcccHH
Q 010610 338 TAS-------DGAMVARGDLGAELPIE-------EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR-AEVSDIA 402 (506)
Q Consensus 338 ~~s-------DGImIaRGDLgvelg~e-------~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtR-AEv~Dva 402 (506)
.++ +|+++|+.||+.++|.. .+..+..+++.+|+++|+++|-.- ....-.. .=..+..
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDgV-------~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGP-------YDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEECC-------CCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccccc-------ccCCCCHHHHHHHHH
Confidence 864 69999999999999863 477888999999999999976421 0001010 0123567
Q ss_pred HHHHhCcceeEe
Q 010610 403 IAVREGADAVML 414 (506)
Q Consensus 403 nav~dG~D~vmL 414 (506)
.+...|+|+-+.
T Consensus 247 ~ar~lGF~GK~~ 258 (433)
T 3oyz_A 247 DNQAKGMLGIWS 258 (433)
T ss_dssp HHHTTTCCEEEE
T ss_pred HHHhCCCCceEe
Confidence 788999998765
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.39 E-value=1e-06 Score=100.48 Aligned_cols=116 Identities=18% Similarity=0.114 Sum_probs=95.4
Q ss_pred CCc---EEEEccCCCHHHHHHHHHHHHh--------cC--CCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcc-cCC
Q 010610 289 KVD---FYAVSFVKDAQVVHELKNYLKS--------CG--ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-AEL 354 (506)
Q Consensus 289 gvD---~IalSfV~saedV~~lr~~l~~--------~~--~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLg-vel 354 (506)
|.+ .|++|||+++++++.+++++.+ .| .++.|.++||++.|+.|+|+|++.+|++.||..||. ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999987642 23 358899999999999999999999999999999988 434
Q ss_pred CC----------------------------CcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHH
Q 010610 355 PI----------------------------EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (506)
Q Consensus 355 g~----------------------------e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvana 404 (506)
+. +.|....++++++|+++ |+||+++.++- ..|.- +...
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~-----~~~l 849 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG------GEPSS-----VAFF 849 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG------GSHHH-----HHHH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcC------CCHHH-----HHHH
Confidence 33 35777889999999998 99999998754 13433 5568
Q ss_pred HHhCcceeEee
Q 010610 405 VREGADAVMLS 415 (506)
Q Consensus 405 v~dG~D~vmLs 415 (506)
+..|.|.+-.|
T Consensus 850 ~~~Gl~~vS~s 860 (876)
T 1vbg_A 850 AKAGLDYVSCS 860 (876)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 89999999877
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.25 E-value=3.2e-06 Score=96.48 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=95.4
Q ss_pred CCc---EEEEccCCCHHHHHHHHHHHHh--------cC--CCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcc-cCC
Q 010610 289 KVD---FYAVSFVKDAQVVHELKNYLKS--------CG--ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-AEL 354 (506)
Q Consensus 289 gvD---~IalSfV~saedV~~lr~~l~~--------~~--~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLg-vel 354 (506)
|.+ .|++|||+++++++.+++++.+ .| .++.|.++||++.|+.++|+|++.+|++.||..||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 7999999999999999987743 23 258899999999999999999999999999999998 444
Q ss_pred CC----------------------------CcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHH
Q 010610 355 PI----------------------------EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404 (506)
Q Consensus 355 g~----------------------------e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvana 404 (506)
+. +.|....++++++|+++ |+||+++.++- ..|.- +...
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~-----~~~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHG------GDPSS-----VEFC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGG------GSHHH-----HHHH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCC------CCHHH-----HHHH
Confidence 43 34777889999999997 99999998744 13433 5567
Q ss_pred HHhCcceeEee
Q 010610 405 VREGADAVMLS 415 (506)
Q Consensus 405 v~dG~D~vmLs 415 (506)
+..|.|.+-.|
T Consensus 844 ~~~Gl~~vS~s 854 (873)
T 1kbl_A 844 HKVGLNYVSCS 854 (873)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 89999998776
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.73 E-value=0.00013 Score=78.97 Aligned_cols=132 Identities=13% Similarity=0.161 Sum_probs=91.8
Q ss_pred HHHhHhhHhcC-CcEEEEccCCCHHHHHHHHHHHHh----cC---CCceEEEecCChhhhhhHHHHHHh-CC---EEEEc
Q 010610 279 WDDIKFGVDNK-VDFYAVSFVKDAQVVHELKNYLKS----CG---ADIHVIVKIESADSIPNLHSIITA-SD---GAMVA 346 (506)
Q Consensus 279 ~~dI~~al~~g-vD~IalSfV~saedV~~lr~~l~~----~~---~~i~IIaKIEt~~aveNldeIl~~-sD---GImIa 346 (506)
..|++..+..| .++|.+|++++++++..+.+.+.. .| ..+++++.|||+.|+.|++||+.+ .+ |+..|
T Consensus 195 ~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G 274 (532)
T 3cuz_A 195 FHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCG 274 (532)
T ss_dssp HHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECC
T ss_pred HHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcC
Confidence 45555545533 499999999999999999888742 22 357899999999999999999976 44 99999
Q ss_pred CCCcccCCCC-------------------CcHHHHHHHHH-HHHHHcCCcEEE--EehhhhhhhcCCCCCh--h----hc
Q 010610 347 RGDLGAELPI-------------------EEVPLLQEEII-RTCRSMGKAVIV--ATNMLESMIVHPTPTR--A----EV 398 (506)
Q Consensus 347 RGDLgvelg~-------------------e~V~~~Qk~II-~~c~~~GkPviv--ATqmLeSMi~~~~PtR--A----Ev 398 (506)
+.|+..++.. ..+..+..+++ .+|+++|++.|- +.+ +. ...|.. + =.
T Consensus 275 ~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~-~p----~kD~e~~~~~~~~l~ 349 (532)
T 3cuz_A 275 RWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAF-IP----SKDEEHNNQVLNKVK 349 (532)
T ss_dssp SHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECB-CC----CSSGGGCHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCcccc-CC----CCChhHHHHHHHHHH
Confidence 9998877610 11344444554 999999998875 321 11 001111 0 12
Q ss_pred ccHHHHHHhCcceeEee
Q 010610 399 SDIAIAVREGADAVMLS 415 (506)
Q Consensus 399 ~Dvanav~dG~D~vmLs 415 (506)
.|.......|+|+-+.-
T Consensus 350 ~dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 350 ADKSLEANNGHDGTWIA 366 (532)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHCCCCccccC
Confidence 34566888999998873
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.54 E-value=0.00012 Score=79.07 Aligned_cols=125 Identities=15% Similarity=0.190 Sum_probs=87.9
Q ss_pred hcCCcEEEEccCCCHHHHHHHHHHHHhc----C---CCceEEEecCChhhhhhHHHHHHh-C---CEEEEcCCCcccCCC
Q 010610 287 DNKVDFYAVSFVKDAQVVHELKNYLKSC----G---ADIHVIVKIESADSIPNLHSIITA-S---DGAMVARGDLGAELP 355 (506)
Q Consensus 287 ~~gvD~IalSfV~saedV~~lr~~l~~~----~---~~i~IIaKIEt~~aveNldeIl~~-s---DGImIaRGDLgvelg 355 (506)
..|+ +|.+|++++++|+..+.+++... | ..+++.+.|||..|+-|++||+.. . .|+..||.|+..+++
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 3576 99999999999999998877432 2 368999999999999999999966 3 499999999887764
Q ss_pred C------C--------------cHHHHHHHHHHHHHHcCCcEEEEehhhhhhh---cCCCCCh----hhcccHHHHHHhC
Q 010610 356 I------E--------------EVPLLQEEIIRTCRSMGKAVIVATNMLESMI---VHPTPTR----AEVSDIAIAVREG 408 (506)
Q Consensus 356 ~------e--------------~V~~~Qk~II~~c~~~GkPvivATqmLeSMi---~~~~PtR----AEv~Dvanav~dG 408 (506)
. + -+....+.++.+|+++|++.|-. |- .++ +.+.-.. .=..|-.....+|
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~-a~ip~~~D~~~n~~~~~~~~~dk~~~~~~G 357 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MA-AQIPIKNNPEANEAAFEKVRADKEREALDG 357 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC----------------------CHHHHHHHHHHHHT
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--cc-ccCcCcCChHHHHHHHHHHHHHHHHHHhCC
Confidence 1 0 24556677889999999987742 21 122 1111011 1123456688899
Q ss_pred cceeEee
Q 010610 409 ADAVMLS 415 (506)
Q Consensus 409 ~D~vmLs 415 (506)
+|+-+.-
T Consensus 358 fdGkwvi 364 (528)
T 3cux_A 358 HDGTWVA 364 (528)
T ss_dssp CSBEEES
T ss_pred CCccccc
Confidence 9998874
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.40 E-value=0.00011 Score=81.40 Aligned_cols=132 Identities=17% Similarity=0.096 Sum_probs=92.0
Q ss_pred HHHhHhhHhc--CCcEEEEccCCCHHHHHHHHHHHHh----cC---CCceEEEecCChhhhhhHHHHHHh-C---CEEEE
Q 010610 279 WDDIKFGVDN--KVDFYAVSFVKDAQVVHELKNYLKS----CG---ADIHVIVKIESADSIPNLHSIITA-S---DGAMV 345 (506)
Q Consensus 279 ~~dI~~al~~--gvD~IalSfV~saedV~~lr~~l~~----~~---~~i~IIaKIEt~~aveNldeIl~~-s---DGImI 345 (506)
..|++..+.. |.++|.+|.+++++++..+.+++.. .| ..+++.+.|||+.|+-|++||+.. . .|+..
T Consensus 372 ~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~ 451 (731)
T 1p7t_A 372 LYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINT 451 (731)
T ss_dssp HHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEE
T ss_pred HhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEc
Confidence 4555544433 4799999999999999999888743 22 258899999999999999999853 3 49999
Q ss_pred cCCCcccCC-CCC----------------cHHHHHHHHHH---HHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHH
Q 010610 346 ARGDLGAEL-PIE----------------EVPLLQEEIIR---TCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV 405 (506)
Q Consensus 346 aRGDLgvel-g~e----------------~V~~~Qk~II~---~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav 405 (506)
|+.|+..++ +.. -+...++..+. +|+++|++.|--+ |-..+.-...=..|-....
T Consensus 452 G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgkG-----m~a~p~dmeg~~~dk~~~~ 526 (731)
T 1p7t_A 452 GFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKG-----MWAMPDLMADMYSQKGDQL 526 (731)
T ss_dssp CHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEEC-----CCCCTTCHHHHHHHTHHHH
T ss_pred CHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCcccc-----cccChhhHHHHHHHHHHHH
Confidence 999988774 211 12234455555 8999999987511 2112211111144556678
Q ss_pred HhCcceeEee
Q 010610 406 REGADAVMLS 415 (506)
Q Consensus 406 ~dG~D~vmLs 415 (506)
..|+|+-++-
T Consensus 527 ~~GfdGkwVi 536 (731)
T 1p7t_A 527 RAGANTAWVP 536 (731)
T ss_dssp HTTCSEEEES
T ss_pred hCCCCCcccC
Confidence 8999998874
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.23 E-value=0.0011 Score=76.05 Aligned_cols=135 Identities=19% Similarity=0.132 Sum_probs=103.6
Q ss_pred CCCCCCccCHHHhHhhH----hcCCc---EEEEccCCCHHHHHHHHHHHH--------hcCC--CceEEEecCChhhhhh
Q 010610 270 TLPSITEKDWDDIKFGV----DNKVD---FYAVSFVKDAQVVHELKNYLK--------SCGA--DIHVIVKIESADSIPN 332 (506)
Q Consensus 270 ~lp~ltekD~~dI~~al----~~gvD---~IalSfV~saedV~~lr~~l~--------~~~~--~i~IIaKIEt~~aveN 332 (506)
..|.+-+-..+.|..|. +.|.+ .|++|||++.++++.+++++. +.|. ++.|..+||+|.|.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 45555555566665542 23755 799999999999999998763 2332 5789999999999999
Q ss_pred HHHHHHhCCEEEEcCCCcc-----cCC-------------------CC-----CcHHHHHHHHHHHHHH--cCCcEEEEe
Q 010610 333 LHSIITASDGAMVARGDLG-----AEL-------------------PI-----EEVPLLQEEIIRTCRS--MGKAVIVAT 381 (506)
Q Consensus 333 ldeIl~~sDGImIaRGDLg-----vel-------------------g~-----e~V~~~Qk~II~~c~~--~GkPvivAT 381 (506)
+|+|++.+|++=||-.||. ++= |+ +-|....++.+++|++ .|+||+++.
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 9999999999999988864 221 11 4577888999999997 699999998
Q ss_pred hhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 382 NMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 382 qmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
|+- ..|.- +.-.+..|.|.+-.|
T Consensus 858 E~~------gdP~~-----~~~l~~~Gid~vS~s 880 (913)
T 1h6z_A 858 EHG------GDPAT-----IGFCHKVGLDYVSCS 880 (913)
T ss_dssp GGG------GCHHH-----HHHHHHHTCSEEEEC
T ss_pred CCC------CCHHH-----HHHHHHcCCCEEEEC
Confidence 864 13443 557888999999887
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.05 E-value=0.031 Score=64.26 Aligned_cols=113 Identities=19% Similarity=0.147 Sum_probs=85.8
Q ss_pred EEEEccCCCHHHHHHHHHHHH--------hcCC--CceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcc-----cCC--
Q 010610 292 FYAVSFVKDAQVVHELKNYLK--------SCGA--DIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-----AEL-- 354 (506)
Q Consensus 292 ~IalSfV~saedV~~lr~~l~--------~~~~--~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLg-----vel-- 354 (506)
.|++|||++.++++.+++.+. +.|. +..|-.+||.|.++-.+|+|++.+|++=||--||. ++=
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998886653 2233 57899999999999999999999999999988862 221
Q ss_pred -----------------CC-----CcHHHHHHHHHHHHHHcC--CcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcc
Q 010610 355 -----------------PI-----EEVPLLQEEIIRTCRSMG--KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGAD 410 (506)
Q Consensus 355 -----------------g~-----e~V~~~Qk~II~~c~~~G--kPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D 410 (506)
|+ +-|..+.+..+++|++++ +||+++.||= ..|.- +.-.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~------gdP~~-----~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG------GDPAT-----IGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGG------GCHHH-----HHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcc------cCHHH-----HHHHHHcCCC
Confidence 11 135556666667777665 6899999864 13443 5578899999
Q ss_pred eeEee
Q 010610 411 AVMLS 415 (506)
Q Consensus 411 ~vmLs 415 (506)
.+-+|
T Consensus 876 ~~S~s 880 (913)
T 2x0s_A 876 YVSCS 880 (913)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99887
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.77 E-value=0.089 Score=57.11 Aligned_cols=125 Identities=19% Similarity=0.213 Sum_probs=85.4
Q ss_pred CccCHHHhHhhHhcCCcEEEE--ccCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHhCCEEEEcCCCcc
Q 010610 275 TEKDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITASDGAMVARGDLG 351 (506)
Q Consensus 275 tekD~~dI~~al~~gvD~Ial--SfV~saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~sDGImIaRGDLg 351 (506)
++.+.+-+...++.|+|+|++ ++-.+ +.+.+..+++++...++.||+ .+-|.++.++|-+ +-+|+|-||-|-=+
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpGS 355 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSGS 355 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred CccHHHHHHHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCCc
Confidence 344566677778999999876 33333 344455556666667788888 8999999877643 34899999866422
Q ss_pred cC-------CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 352 AE-------LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 352 ve-------lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
+- +|.+ -..+...+.+.|+.+|+|||--.. .- --.|++.|+..|+|+|||.
T Consensus 356 iCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIADGG---------I~---~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 356 ICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIADGG---------IG---NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp TBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEEESC---------CC---SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEecCC---------cC---cchHHHHHhhcCCCEEEEc
Confidence 21 1222 234556677889999999884322 11 2468999999999999984
No 34
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.51 E-value=0.16 Score=47.29 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=87.5
Q ss_pred HhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceE-EEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCc
Q 010610 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~I-IaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~ 358 (506)
.++.+.+.|+|+|.++.....+++.++.+.+++.|..+.+ +...+| .++.+..+.+. +|.|.+.+|-=|...+...
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDD--LPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSS--HHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 3778889999999998766557888888888877654332 112233 24557777777 8998887652222222222
Q ss_pred HHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 359 VPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 359 V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
+ ..-+++ .+.. +.|+++... . + ..++..+...|+|++....--..++.|.++++.+.+.++
T Consensus 147 ~-~~i~~l---~~~~~~~~i~~~gG---------I-~---~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 147 I-DDLITM---LKVRRKARIAVAGG---------I-S---SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp H-HHHHHH---HHHCSSCEEEEESS---------C-C---TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred H-HHHHHH---HHHcCCCcEEEECC---------C-C---HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 2 111222 2222 678776532 2 2 236778888999999987555567789999988877654
No 35
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.92 E-value=0.13 Score=53.98 Aligned_cols=118 Identities=23% Similarity=0.332 Sum_probs=72.6
Q ss_pred HHHhHhhHhcCCcEEEE--ccCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEcC--CCccc
Q 010610 279 WDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVAR--GDLGA 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~Ial--SfV~saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIaR--GDLgv 352 (506)
.+.++.+++.|+|+|.+ +|-.+....+.++. +++.- .++|++ .+=|.+.. ..+.+. +|+|.++- |..+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~-~i~Vi~g~V~t~e~A---~~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM-NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC-CCEEEEEEECSHHHH---HHHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC-CCeEEEeecCCHHHH---HHHHHcCCCEEEEeCCCCcCcc
Confidence 57788889999999987 66555433333433 33322 577876 56555444 344444 89999963 22111
Q ss_pred -----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 353 -----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 353 -----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
..+.. -..+..++.+.+++.++|||-+.-+- + ..|++.++..|+|++|+
T Consensus 221 tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~---------~---~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 221 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR---------Y---SGDIGKALAVGASSVMI 274 (400)
T ss_dssp --CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC---------S---HHHHHHHHTTTCSEEEE
T ss_pred cccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCC---------C---HHHHHHHHHcCCCEEEE
Confidence 01111 23344566666777799999765332 2 35799999999999996
No 36
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=94.30 E-value=0.37 Score=47.21 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=90.4
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCC--cccCCCCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGD--LGAELPIE 357 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGD--Lgvelg~e 357 (506)
..++.+.+.|+|+|.+.. +..+++.++.+.+++.|....+...=.|+ ++.+++++...|.|++-.-+ +|-.-=.+
T Consensus 100 ~~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp--~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~ 176 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPATG--IDCLKYVESNIDRVLIMSVNPGFGGQKFIP 176 (246)
T ss_dssp HHHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTCC--SGGGTTTGGGCSEEEEECSCTTC--CCCCT
T ss_pred HHHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHhcCCEEEEeeecCCCCCcccch
Confidence 356777899999999975 44457777778888888877776555554 57788999889988874222 22221123
Q ss_pred cHHHHHHHHHHHHHHcC--CcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHH
Q 010610 358 EVPLLQEEIIRTCRSMG--KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVS 435 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~G--kPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~ 435 (506)
....-.+++-+.+.+.| .++-+... -.|. .+..++..|+|.++.-.---..+-|.++++.|++.+
T Consensus 177 ~~l~KI~~lr~~~~~~~~~~~I~VDGG--------I~~~-----ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEIDGG--------VNPY-----NIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEESS--------CCTT-----THHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEECC--------cCHH-----HHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 33334445555555555 44444321 1233 367889999999988643333567999999888765
Q ss_pred H
Q 010610 436 L 436 (506)
Q Consensus 436 ~ 436 (506)
.
T Consensus 244 ~ 244 (246)
T 3inp_A 244 N 244 (246)
T ss_dssp H
T ss_pred h
Confidence 3
No 37
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.18 E-value=0.31 Score=52.36 Aligned_cols=123 Identities=20% Similarity=0.199 Sum_probs=76.9
Q ss_pred cCHHHhHhhHhcCCcEEEEccCC-CHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEcCCCccc-
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGA- 352 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~-saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIaRGDLgv- 352 (506)
.+.+.++..++.|+|.|.+.... ..+.+.++.+.+.+.-.++.|++ .+-|.+....+ .+. +|+|.+|-|-=+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~---~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKAL---IEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHH---HHHTCSEEEECSSCSTTC
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHH---HHhCCCEEEECCCCcccc
Confidence 34677788899999999985443 23333333334444334556665 56666554333 333 8999986432111
Q ss_pred ------CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 353 ------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 353 ------elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.++.+ -..+...+.+.|++.++|+|.+..+- -..|++.|+..|+|++|+.
T Consensus 333 ~~~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 333 TTRVVAGVGVP-QLTAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCC-cHHHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheec
Confidence 11222 23445567778888999999765332 2357999999999999984
No 38
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=94.01 E-value=0.89 Score=43.14 Aligned_cols=138 Identities=12% Similarity=0.155 Sum_probs=83.2
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH---hCCEEEEcCCCc---ccC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT---ASDGAMVARGDL---GAE 353 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~---~sDGImIaRGDL---gve 353 (506)
+.++.+.+.|+|+|.+..-.+.+.+.++.+.+++.|.. ++.-+....-++.+.+++. .+|.+.+..-.- |-.
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~--igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMR--PGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCE--EEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred HHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCC--EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 34777788999999998776655424444445555544 4445533334567888888 799998853222 222
Q ss_pred CCCCcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 354 LPIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 354 lg~e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
+++..+. .+-+..+.. +.|+.++..+ .|. .+..++..|+|++....---..+-|.++++.|+
T Consensus 156 ~~~~~l~----~i~~~~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~ 218 (228)
T 1h1y_A 156 FMPEMME----KVRALRKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALR 218 (228)
T ss_dssp CCGGGHH----HHHHHHHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred CCHHHHH----HHHHHHHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 2222222 222222222 7888876421 222 355666679999998644444456999999998
Q ss_pred HHHH
Q 010610 433 TVSL 436 (506)
Q Consensus 433 ~I~~ 436 (506)
+.++
T Consensus 219 ~~~~ 222 (228)
T 1h1y_A 219 KSVE 222 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 39
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.97 E-value=0.94 Score=46.76 Aligned_cols=123 Identities=17% Similarity=0.254 Sum_probs=77.0
Q ss_pred cCHHHhHhhHhcCCcEEEE--ccCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHhCCEEEEc--CCCcc
Q 010610 277 KDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITASDGAMVA--RGDLG 351 (506)
Q Consensus 277 kD~~dI~~al~~gvD~Ial--SfV~saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~sDGImIa--RGDLg 351 (506)
.+.+.++.+++.|+|+|.+ ++-.+...+..++.+ ++...++.||+ .+-|++....+.+ .=+|+|.+| +|--.
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~i-k~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs~~ 184 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRET-RAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSIC 184 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHH-HHHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTB
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHH-HHhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCCCC
Confidence 4677888899999999987 555555444444443 33334567766 4777766544432 238999995 22211
Q ss_pred c-----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 352 A-----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 352 v-----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
. ..+.+. .....++.+.|+..++|||-+.-+- + -.|++.++..|+|++|+.
T Consensus 185 ~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~GGI~---------~---~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 185 TTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADGGIR---------F---SGDISKAIAAGASCVMVG 240 (366)
T ss_dssp CHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEESCCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred CcccccCcccch-HHHHHHHHHHHhhcCCeEEEeCCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 0 112222 2334456666777899998764322 2 247899999999999974
No 40
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=93.96 E-value=0.33 Score=46.74 Aligned_cols=139 Identities=12% Similarity=0.146 Sum_probs=88.6
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCC--
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIE-- 357 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e-- 357 (506)
..++.+.+.|+|+|.+.. +..+++.+..+.+++.|....+...-.|+ ++.+++++...|.|++- +++-|+.
T Consensus 78 ~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t~--~e~l~~~l~~~D~Vl~m----sv~pGf~Gq 150 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGTS--VEYLAPWANQIDMALVM----TVEPGFGGQ 150 (228)
T ss_dssp GGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTSC--GGGTGGGGGGCSEEEEE----SSCTTTCSC
T ss_pred HHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCCC--HHHHHHHhccCCeEEEe----eecCCCCCc
Confidence 346677889999999965 55556777777788878776666555554 67888999889988873 2222221
Q ss_pred -cHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHH
Q 010610 358 -EVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (506)
Q Consensus 358 -~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I 434 (506)
-.+..-++ ++..++. +.|+.+... -.| ..+..++..|+|.+....---..+-|.++++.+++.
T Consensus 151 ~f~~~~l~k-i~~lr~~~~~~~I~VdGG--------I~~-----~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~ 216 (228)
T 3ovp_A 151 KFMEDMMPK-VHWLRTQFPSLDIEVDGG--------VGP-----DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNV 216 (228)
T ss_dssp CCCGGGHHH-HHHHHHHCTTCEEEEESS--------CST-----TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHH
T ss_pred ccCHHHHHH-HHHHHHhcCCCCEEEeCC--------cCH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 12222222 2222222 355555432 123 336788999999998864333456799999988887
Q ss_pred HHHHh
Q 010610 435 SLRTE 439 (506)
Q Consensus 435 ~~~aE 439 (506)
+.++-
T Consensus 217 ~~~~~ 221 (228)
T 3ovp_A 217 CSEAA 221 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 41
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=93.89 E-value=0.13 Score=59.34 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=92.2
Q ss_pred HhhHhcCC---cEEEEccCCCHHHHHHHHHHHHhcCC--CceEEEecCChhhhhhHHHHHHh--C-----------CEEE
Q 010610 283 KFGVDNKV---DFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKIESADSIPNLHSIITA--S-----------DGAM 344 (506)
Q Consensus 283 ~~al~~gv---D~IalSfV~saedV~~lr~~l~~~~~--~i~IIaKIEt~~aveNldeIl~~--s-----------DGIm 344 (506)
+.+.+.|. ..+++|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++. . --||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 34445564 45789999999999999999998884 58899999999999999999986 2 1699
Q ss_pred EcCCCcccCCCCC----cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCCh
Q 010610 345 VARGDLGAELPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR 395 (506)
Q Consensus 345 IaRGDLgvelg~e----~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtR 395 (506)
+|..|=+.+-|+- .+..+|.++.+.|+++|+++...=..=.|.=...-|+.
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 9999999998863 79999999999999999998876544445444555554
No 42
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=93.84 E-value=0.076 Score=57.50 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=77.7
Q ss_pred cCCcEEEEccCCCHHHHHHHHHHHHh--------cC-----CCceEEEecCChhhhhhHHHHHHh--C-----------C
Q 010610 288 NKVDFYAVSFVKDAQVVHELKNYLKS--------CG-----ADIHVIVKIESADSIPNLHSIITA--S-----------D 341 (506)
Q Consensus 288 ~gvD~IalSfV~saedV~~lr~~l~~--------~~-----~~i~IIaKIEt~~aveNldeIl~~--s-----------D 341 (506)
..+-.+++||.++++|+.++..++++ .| ..+.||.-+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 34567999999999999999877743 12 256899999999999999999985 2 2
Q ss_pred EEEEcCCCcccCCCCC----cHHHHHHHHHHHHHHcCCcEEEE
Q 010610 342 GAMVARGDLGAELPIE----EVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 342 GImIaRGDLgvelg~e----~V~~~Qk~II~~c~~~GkPvivA 380 (506)
-||+|+.|=+.+-|+- .+..+|.++.+.|+++|+++-..
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lF 260 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPI 260 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 6999999988888863 78999999999999999997654
No 43
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.65 E-value=0.43 Score=51.04 Aligned_cols=123 Identities=17% Similarity=0.226 Sum_probs=77.6
Q ss_pred ccCHHHhHhhHhcCCcEEEEccCC--CHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEcCCCcc
Q 010610 276 EKDWDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLG 351 (506)
Q Consensus 276 ekD~~dI~~al~~gvD~IalSfV~--saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIaRGDLg 351 (506)
+.+.+.++..++.|+|+|.+-... +...+..++. +++.-.++.|++ .+-+.+.... +.+. +|+|.++-|.=+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARA---LIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCCEEEEEECSHHHHHH---HHHHTCSEEEECSSCCT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHH-HHHHCCCceEEEcccCcHHHHHH---HHHhCCCEEEECCCCCc
Confidence 456788888899999999885432 3322333333 333333566666 4777766544 3344 899998643222
Q ss_pred cC-------CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 352 AE-------LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 352 ve-------lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.. .+. .-..+..++.+.|++.++|+|.+..+- + ..|++.++..|+|++|+.
T Consensus 306 ~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~GGI~---------~---~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 306 ICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIR---------F---SGDISKAIAAGASCVMVG 363 (496)
T ss_dssp TBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred CcccccccCCCc-cHHHHHHHHHHHhccCCCeEEEeCCCC---------C---HHHHHHHHHcCCCeEEec
Confidence 11 111 133445677788888899999765322 2 357899999999999984
No 44
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=93.35 E-value=1.1 Score=43.16 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=89.6
Q ss_pred HhHhhHhcCCcEEEEccCC-CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEE---cCCCcccCCCC
Q 010610 281 DIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV---ARGDLGAELPI 356 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~-saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImI---aRGDLgvelg~ 356 (506)
.++.+.+.|+|+|.+..-. + .++.++.+.+++.|..+.+...-.|+ ++.+++++...|.|++ -+|==|-.+.
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~- 147 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFI- 147 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCC-
T ss_pred HHHHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCcccc-
Confidence 4677789999999988644 3 46788888888888887777766666 7778888888998875 2221122222
Q ss_pred CcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee-ccccCCCC-HHHHHHHHH
Q 010610 357 EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS-GETAHGKF-PLKAVKVMH 432 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs-~ETA~G~y-PveaV~~m~ 432 (506)
+....-.+++-+..... +.++.+... -.|. .+..++..|+|.+... .---..+- |.++++.|+
T Consensus 148 ~~~l~kI~~lr~~~~~~~~~~~I~VdGG--------I~~~-----~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~ 214 (231)
T 3ctl_A 148 PEMLDKLAELKAWREREGLEYEIEVDGS--------CNQA-----TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMT 214 (231)
T ss_dssp TTHHHHHHHHHHHHHHHTCCCEEEEESC--------CSTT-----THHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEECC--------cCHH-----HHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHH
Confidence 23333334444444443 456555431 1222 3667788999999885 43333334 899999998
Q ss_pred HHHH
Q 010610 433 TVSL 436 (506)
Q Consensus 433 ~I~~ 436 (506)
+.+.
T Consensus 215 ~~~~ 218 (231)
T 3ctl_A 215 AQIL 218 (231)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7554
No 45
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=93.29 E-value=1.1 Score=46.07 Aligned_cols=119 Identities=21% Similarity=0.331 Sum_probs=72.6
Q ss_pred HHHhHhhHhcCCcEEEE--ccCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEc--CCCccc
Q 010610 279 WDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVA--RGDLGA 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~Ial--SfV~saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIa--RGDLgv 352 (506)
.+.++.+++.|+|+|.+ ++-.+...+..++.+.+.. +++||+ .+-|++..+. +.+. +|+|.++ +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~---l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHH---HHHcCcCEEEEecCCCcCCC
Confidence 56778889999999987 4433333333343333322 567776 6777665433 3444 8999996 332110
Q ss_pred -----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 353 -----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 353 -----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..+.+. .....++.+.++..++|+|.+.-+ -+ ..|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI---------~~---~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGI---------RY---SGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCC---------CS---HHHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCC---------CC---HHHHHHHHHcCCCEEEEC
Confidence 011222 234455666677789999876432 12 247899999999999974
No 46
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.76 E-value=0.61 Score=49.76 Aligned_cols=123 Identities=20% Similarity=0.210 Sum_probs=75.8
Q ss_pred ccCHHHhHhhHhcCCcEEEEc--cCCCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcCCCcc
Q 010610 276 EKDWDDIKFGVDNKVDFYAVS--FVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLG 351 (506)
Q Consensus 276 ekD~~dI~~al~~gvD~IalS--fV~saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaRGDLg 351 (506)
+.+.+.++..++.|+|+|.+- +-.+......++. +++.-.++.|++. +-|.+... .+.+. +|+|.+|-|.=+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~p~~~Vi~g~v~t~e~a~---~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTFPDVQVIGGNIATAEAAK---ALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHCTTSEEEEEEECSHHHHH---HHHHTTCSEEEECSSCST
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHH-HHHHCCCceEEEeeeCcHHHHH---HHHHcCCCEEEECCCCCc
Confidence 345677788889999999863 3333322333333 3333335677775 66665543 33344 899999643211
Q ss_pred c-------CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 352 A-------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 352 v-------elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
. ..+.+ -..+..++.+.|+..++|+|.+..+- + ..|++.++..|+|++|+.
T Consensus 304 ~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~---------~---~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADGGIR---------F---SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC---------S---HHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeCCCC---------C---HHHHHHHHHcCCCeeeec
Confidence 1 12222 23444667777777899999765332 2 357899999999999984
No 47
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=92.47 E-value=0.52 Score=45.20 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=83.2
Q ss_pred HhHhhHhcCCcEEEEccC--CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccC--CCC
Q 010610 281 DIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAE--LPI 356 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV--~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgve--lg~ 356 (506)
.++.+.+.|+|+|.+..- .. ++..++.+.+.+.|..+.+...-.|+ .+.+.+++..+|.|.+..-.-|.. --.
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~ 153 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI 153 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc
Confidence 467778899999999865 33 45556666666667666665555665 555777888899887764333211 111
Q ss_pred CcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHH
Q 010610 357 EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I 434 (506)
+......+++-+.+.+. +.|+.+... -.+ ..+......|+|++..-.---..+.|.++++.|++.
T Consensus 154 ~~~~~~i~~lr~~~~~~~~~~~I~v~GG--------I~~-----~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 154 PEVLPKIRALRQMCDERGLDPWIEVDGG--------LKP-----NNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp GGGHHHHHHHHHHHHHHTCCCEEEEESS--------CCT-----TTTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECC--------cCH-----HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 22333334444444333 677766532 122 235566667999999864444445688999888653
No 48
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.43 E-value=0.68 Score=44.78 Aligned_cols=42 Identities=7% Similarity=0.086 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCcEE--EEeCCCCChHHHHHHHHHHHHHHHhcC
Q 010610 123 REMIWKLAEAGMNVA--RLNMSHGDHASHQKVIDLVKEYNAQSK 164 (506)
Q Consensus 123 ~e~i~~li~aGm~v~--RiN~SHg~~e~~~~~i~~ir~~~~~~~ 164 (506)
.+.+++.+++|++.+ .+|....+.++..+.++.+.++.++++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g 145 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG 145 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence 567899999999999 888888777766677777777766665
No 49
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.39 E-value=2.3 Score=39.38 Aligned_cols=137 Identities=12% Similarity=0.102 Sum_probs=79.8
Q ss_pred HhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEE-cC--CCcccCCCCC
Q 010610 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV-AR--GDLGAELPIE 357 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImI-aR--GDLgvelg~e 357 (506)
.++.+.+.|+|+|.+.--.. ++..++.+.+++.|. .++.-+-+....+.+.++...+|.|++ +. |==|...+..
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g~--~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~ 152 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAGM--KAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPE 152 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTTS--EEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGG
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcCC--cEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHH
Confidence 46778889999998865554 455566666665553 344445333334445555566898865 32 2112222322
Q ss_pred cHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHH
Q 010610 358 EVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I 434 (506)
...--+++-+.+... +.|++++.. -.| .++..+...|+|++....--..+..|.++++.+.+.
T Consensus 153 -~~~~i~~~~~~~~~~~~~~~i~v~GG--------I~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 153 -CLEKVATVAKWRDEKGLSFDIEVDGG--------VDN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp -GHHHHHHHHHHHHHTTCCCEEEEESS--------CCT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhcCCCceEEEECc--------CCH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 222223333334333 577766532 122 356667777999999876555667799999888654
No 50
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.34 E-value=0.15 Score=58.34 Aligned_cols=99 Identities=20% Similarity=0.288 Sum_probs=83.7
Q ss_pred CCcEEEEccCCCHHHHHHHHHHHHhcCC--CceEEEecCChhhhhhHHHHHHh---C----------CEEEEcCCCcccC
Q 010610 289 KVDFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKIESADSIPNLHSIITA---S----------DGAMVARGDLGAE 353 (506)
Q Consensus 289 gvD~IalSfV~saedV~~lr~~l~~~~~--~i~IIaKIEt~~aveNldeIl~~---s----------DGImIaRGDLgve 353 (506)
.+.-+++|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++. . --||+|..|=+-+
T Consensus 468 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KD 547 (883)
T 1jqn_A 468 SIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKD 547 (883)
T ss_dssp SEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHH
T ss_pred hcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccccc
Confidence 4567899999999999999999988875 58899999999999999999986 1 1699999988888
Q ss_pred CCCC----cHHHHHHHHHHHHHHcCCcEEEEehhhhhh
Q 010610 354 LPIE----EVPLLQEEIIRTCRSMGKAVIVATNMLESM 387 (506)
Q Consensus 354 lg~e----~V~~~Qk~II~~c~~~GkPvivATqmLeSM 387 (506)
-|+- .+..+|.++.+.|+++|+++...=..=.|+
T Consensus 548 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsv 585 (883)
T 1jqn_A 548 AGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSI 585 (883)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 8863 799999999999999999988764433333
No 51
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=92.18 E-value=0.76 Score=47.45 Aligned_cols=118 Identities=18% Similarity=0.264 Sum_probs=69.7
Q ss_pred cCHHHhHhhHhcCCcEEEE--ccCCCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcCCC--c
Q 010610 277 KDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGD--L 350 (506)
Q Consensus 277 kD~~dI~~al~~gvD~Ial--SfV~saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaRGD--L 350 (506)
.+.+.++.+++.|+|+|.+ ++-. .+.+.+..+.+++...+++||++ +-|++.... ..+. +|+|.|+-|- -
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~-~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~---a~~aGaD~I~Vg~g~G~~ 175 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAH-AKYVGKTLKSLRQLLGSRCIMAGNVATYAGADY---LASCGADIIKAGIGGGSV 175 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCS-SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHH---HHHTTCSEEEECCSSSSC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC-cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHH---HHHcCCCEEEEcCCCCcC
Confidence 4567788889999999988 3322 23322222333332246889995 877765433 3333 8999995221 1
Q ss_pred cc-----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 351 GA-----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 351 gv-----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.. ..+ +| |-..+..|.++.+|||....+- .-.|++.++..|+|+||+.
T Consensus 176 ~~tr~~~g~g---~p--~l~aI~~~~~~~~PVIAdGGI~------------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 176 CSTRIKTGFG---VP--MLTCIQDCSRADRSIVADGGIK------------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp HHHHHHHCCC---CC--HHHHHHHHTTSSSEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCcc---HH--HHHHHHHHHHhCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 00 011 12 3344555555545888664321 2357999999999999974
No 52
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=92.17 E-value=1.6 Score=40.66 Aligned_cols=137 Identities=11% Similarity=0.090 Sum_probs=76.6
Q ss_pred CHHHhHhhHhcCCcEEEEccCC--CH-HHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVK--DA-QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAE 353 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~--sa-edV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgve 353 (506)
+.+.++.+++.|+|+|.+.... ++ +.+.++.+.+++.-....++..+-|.+-.. ...+. +|.|+++.....-.
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~---~~~~~G~d~i~~~~~g~t~~ 153 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAK---NAARLGFDYIGTTLHGYTSY 153 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHH---HHHHTTCSEEECTTTTSSTT
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHH---HHHHcCCCEEEeCCCcCcCC
Confidence 3567888899999999876543 22 233444444444323456666666543322 22222 79998865433211
Q ss_pred -CCCC-cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHH
Q 010610 354 -LPIE-EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (506)
Q Consensus 354 -lg~e-~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m 431 (506)
.+.. ..+ -...+-+.++..+.|++.... .-+ ..|+..++..|+|++++. +++-+ |.++.+.+
T Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~~ipvia~GG---------I~~---~~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 154 TQGQLLYQN-DFQFLKDVLQSVDAKVIAEGN---------VIT---PDMYKRVMDLGVHCSVVG--GAITR-PKEITKRF 217 (223)
T ss_dssp STTCCTTHH-HHHHHHHHHHHCCSEEEEESS---------CCS---HHHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CCCCCCCcc-cHHHHHHHHhhCCCCEEEecC---------CCC---HHHHHHHHHcCCCEEEEC--hHHcC-cHHHHHHH
Confidence 1111 122 122333334456899987642 222 245777888899999985 44444 77777766
Q ss_pred HH
Q 010610 432 HT 433 (506)
Q Consensus 432 ~~ 433 (506)
.+
T Consensus 218 ~~ 219 (223)
T 1y0e_A 218 VQ 219 (223)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 53
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=91.86 E-value=2.2 Score=40.94 Aligned_cols=136 Identities=16% Similarity=0.084 Sum_probs=82.5
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccC-
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAE- 353 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgve- 353 (506)
+.+++..+++.|+|+|.+.- ..+++.+.++.+.+++. ...+++.+-|.+-. ....+. +|.|-+.-..+.-.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea---~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDDG---LACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHHH---HHHHHTTCSEEECTTTTSSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHHH---HHHHhCCCCEEEEcCccCCCCC
Confidence 45677888999999997643 34667777777777664 46677766554332 222333 78885432212111
Q ss_pred -CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 354 -LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 354 -lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
.....+.. ++..++.++|+|... ..-|. .|+..+...|+|++++. |++.+ |.+..+.+.
T Consensus 165 ~~~~~~~~~-----i~~l~~~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~ 224 (232)
T 3igs_A 165 TPEEPDLPL-----VKALHDAGCRVIAEG---------RYNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYN 224 (232)
T ss_dssp CCSSCCHHH-----HHHHHHTTCCEEEES---------CCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCHHH-----HHHHHhcCCcEEEEC---------CCCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHH
Confidence 11123322 222233389998664 23333 46778888899999995 56665 888888887
Q ss_pred HHHHHH
Q 010610 433 TVSLRT 438 (506)
Q Consensus 433 ~I~~~a 438 (506)
+.++++
T Consensus 225 ~~i~~~ 230 (232)
T 3igs_A 225 DALKKA 230 (232)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766543
No 54
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.84 E-value=1.1 Score=45.13 Aligned_cols=111 Identities=15% Similarity=0.193 Sum_probs=68.5
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEE-cCCCcccCCCCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV-ARGDLGAELPIE 357 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImI-aRGDLgvelg~e 357 (506)
+.++.+.+.|+|+|.+++=...+.++.+++ . .++++.++.+.+-.. .+.+. +|+|.+ ++ +-|-..|..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a~---~~~~~GaD~i~v~g~-~~GG~~g~~ 148 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALAK---RMEKIGADAVIAEGM-EAGGHIGKL 148 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHHH---HHHHTTCSCEEEECT-TSSEECCSS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHHH---HHHHcCCCEEEEECC-CCCCCCCCc
Confidence 456788899999999988655555555543 2 478999998766443 33334 899999 43 222222211
Q ss_pred cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.-...-+++ ....++||+.+..+- + -.|+..++..|+|++++.
T Consensus 149 ~~~~ll~~i---~~~~~iPViaaGGI~---------~---~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 149 TTMTLVRQV---ATAISIPVIAAGGIA---------D---GEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CHHHHHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHH---HHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEec
Confidence 111222222 234579999885322 1 236778888999999874
No 55
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=91.80 E-value=1.3 Score=42.92 Aligned_cols=135 Identities=14% Similarity=0.092 Sum_probs=85.3
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhc---------CCCceEEEecCChhhhhhHHHHHHhCCEEEE---c
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC---------GADIHVIVKIESADSIPNLHSIITASDGAMV---A 346 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~---------~~~i~IIaKIEt~~aveNldeIl~~sDGImI---a 346 (506)
...++.+.+.|+|+|.+..-.+ +++.++.+.+++. |..+.+-..-+|+ ++.+++++..+|.|.+ .
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~ 158 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLD 158 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEE
T ss_pred HHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeec
Confidence 4557778899999998886555 5677777777776 6666666655665 6677888888998877 5
Q ss_pred CCCcccCCCCCcHHHHHHHHHHHHHHc-----CCcEEEEehhhhhhhcCCCCChhhcccHHHHHH--hCcceeEeecccc
Q 010610 347 RGDLGAELPIEEVPLLQEEIIRTCRSM-----GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR--EGADAVMLSGETA 419 (506)
Q Consensus 347 RGDLgvelg~e~V~~~Qk~II~~c~~~-----GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~--dG~D~vmLs~ETA 419 (506)
+| +|-. ...+...++|-+..+.. +.|+.+...+ +. ..+..++. .|+|++....---
T Consensus 159 pg-fggq---~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~~---~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 159 PR-NGTK---YPSELILDRVIQVEKRLGNRRVEKLINIDGSM----------TL---ELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp TT-TTEE---CCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------CH---HHHHHHHHSSSCCCCEEECGGGG
T ss_pred cC-cCCe---ecChhHHHHHHHHHHHHHhcCCCceEEEECCc----------CH---HHHHHHHHhCCCCcEEEEeeHHh
Confidence 44 2211 12333344333333222 5676655321 11 13556778 8999999864433
Q ss_pred CCCCHHHHHHHHHHH
Q 010610 420 HGKFPLKAVKVMHTV 434 (506)
Q Consensus 420 ~G~yPveaV~~m~~I 434 (506)
.. -|.++++.+++.
T Consensus 222 ~~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 222 SG-ELKTNLKVWKSS 235 (237)
T ss_dssp SS-CHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHh
Confidence 33 688999888653
No 56
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=91.61 E-value=2.6 Score=44.87 Aligned_cols=120 Identities=21% Similarity=0.237 Sum_probs=74.2
Q ss_pred CHHHhHhhHhcCCcEEEE--ccCCCH---HHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHhCCEEEEcC--CC
Q 010610 278 DWDDIKFGVDNKVDFYAV--SFVKDA---QVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITASDGAMVAR--GD 349 (506)
Q Consensus 278 D~~dI~~al~~gvD~Ial--SfV~sa---edV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~sDGImIaR--GD 349 (506)
..+.++.+++.|+|+|.+ ++-... +.++++++.+ .+.+|+++ +.+.+....+.+. -+|+|.++- |-
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~~a--Gad~I~vg~~~G~ 329 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLIDA--GVDGLRVGMGCGS 329 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHHHH--TCSEEEECSSCSC
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHHHc--CCCEEEECCCCCc
Confidence 466778889999999998 433232 3344444332 35788875 7776654443321 289999954 31
Q ss_pred cccC-----CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 350 LGAE-----LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 350 Lgve-----lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
-... .|.+ .+.....+-+.++..+.|+|.+..+- ...|+..++..|+|++|+..
T Consensus 330 ~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 330 ICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred ccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeECH
Confidence 1000 1211 23444566666777799999764322 23579999999999999854
No 57
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=91.51 E-value=1.7 Score=40.09 Aligned_cols=132 Identities=13% Similarity=0.087 Sum_probs=76.6
Q ss_pred hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec--CChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCc
Q 010610 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI--ESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI--Et~~aveNldeIl~~-sDGImIaRGDLgvelg~e~ 358 (506)
++.+.+.|+|+|.++.-...+.+.++++++++.|..+.+ +-. .|+.. .+.++.+. .|.+-+.++-.+...|..-
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv-~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVV-DLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE-ECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEE-EEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 467788999999987666667888888888876655322 222 23222 12233222 7887333343222223221
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHH
Q 010610 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 433 (506)
Q Consensus 359 V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~ 433 (506)
.. +++-+.+.. ..|+++...+ .|. .+..++..|+|++....--..-+.|.++++.+.+
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 333333333 6787664321 222 5777899999999976444444568888887754
No 58
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.14 E-value=2.6 Score=41.19 Aligned_cols=69 Identities=12% Similarity=0.170 Sum_probs=49.9
Q ss_pred hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC-CceEEEecC--C-hhhhhhHHHHHHh-CCEEEEcCCCcccC
Q 010610 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIE--S-ADSIPNLHSIITA-SDGAMVARGDLGAE 353 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~-~i~IIaKIE--t-~~aveNldeIl~~-sDGImIaRGDLgve 353 (506)
.+.+.+.|+|||-+||-.+.++++++++.. +. .+..+--|- + .++++|+.+.++. +||+.++|.=+..+
T Consensus 165 ~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~ 238 (263)
T 1w8s_A 165 ARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR 238 (263)
T ss_dssp HHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTST
T ss_pred HHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCc
Confidence 356788999999999966788888887654 22 344444453 3 5677788888887 89999998755443
No 59
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.14 E-value=2.1 Score=40.56 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=83.1
Q ss_pred CCCCccCH----HHhHhhHhcCCcEEEEc-----cCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH
Q 010610 272 PSITEKDW----DDIKFGVDNKVDFYAVS-----FVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (506)
Q Consensus 272 p~ltekD~----~dI~~al~~gvD~IalS-----fV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~ 338 (506)
|++..-|. ++++.+.+.|+|++-+= |+.+ .+.++++++.+ +....+-.++.+++. .++..++
T Consensus 11 psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~~--~i~~~~~ 85 (228)
T 1h1y_A 11 PSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPSD--YVEPLAK 85 (228)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGGG--GHHHHHH
T ss_pred EEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHHH--HHHHHHH
Confidence 44444454 44567778899998666 7776 66666666543 223445567877643 4777777
Q ss_pred h-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh---CcceeEe
Q 010610 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE---GADAVML 414 (506)
Q Consensus 339 ~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d---G~D~vmL 414 (506)
+ +||+.+--+. .+ ......++.++..|+.++++. +|. |..| ....+.+ ++|.+++
T Consensus 86 agad~v~vH~~~-------~~--~~~~~~~~~i~~~g~~igv~~--------~p~-t~~e---~~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 86 AGASGFTFHIEV-------SR--DNWQELIQSIKAKGMRPGVSL--------RPG-TPVE---EVFPLVEAENPVELVLV 144 (228)
T ss_dssp HTCSEEEEEGGG-------CT--TTHHHHHHHHHHTTCEEEEEE--------CTT-SCGG---GGHHHHHSSSCCSEEEE
T ss_pred cCCCEEEECCCC-------cc--cHHHHHHHHHHHcCCCEEEEE--------eCC-CCHH---HHHHHHhcCCCCCEEEE
Confidence 6 8999774111 11 111466778888999999875 111 1112 2345556 9999987
Q ss_pred ec-c--ccCCCCHHHHHHHHHHHHHHH
Q 010610 415 SG-E--TAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 415 s~-E--TA~G~yPveaV~~m~~I~~~a 438 (506)
-+ + +.--+|+-..++.++++.+..
T Consensus 145 ~sv~pg~~g~~~~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 145 MTVEPGFGGQKFMPEMMEKVRALRKKY 171 (228)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHC
T ss_pred EeecCCCCcccCCHHHHHHHHHHHHhc
Confidence 32 1 111246656666665555443
No 60
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=90.83 E-value=2 Score=43.86 Aligned_cols=122 Identities=15% Similarity=0.163 Sum_probs=70.1
Q ss_pred CHHHhHhhHhc--CCcEEEEccC-CCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcCCCccc
Q 010610 278 DWDDIKFGVDN--KVDFYAVSFV-KDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLGA 352 (506)
Q Consensus 278 D~~dI~~al~~--gvD~IalSfV-~saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaRGDLgv 352 (506)
+.+.+...++. |+|++.+.+- .+..++.+.-+.+++...+++|+++ +-|++. .....+. +|+|.|+-|-=+.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~---A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEM---VEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHH---HHHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHH---HHHHHHhCCCEEEECCCCCcC
Confidence 34555566666 8998876432 2233333333333333335677764 555433 3333344 8999986431000
Q ss_pred C-------CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 353 E-------LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 353 e-------lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
+ .+.+ -.....++.+.++..++|||.+..+. .-.|++.|+..|+|++++.
T Consensus 196 ~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 196 CTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp BCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceecc
Confidence 1 1111 23344566777878899999875433 2357999999999999875
No 61
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=90.78 E-value=1.6 Score=42.12 Aligned_cols=131 Identities=9% Similarity=0.070 Sum_probs=80.7
Q ss_pred CcEEEEccCCCHHHHHHHHH---HHHhcCCCceEEEecCChhhhhhHHHHHH--hCCEEEEcCCCcccCCCCCcHHHHHH
Q 010610 290 VDFYAVSFVKDAQVVHELKN---YLKSCGADIHVIVKIESADSIPNLHSIIT--ASDGAMVARGDLGAELPIEEVPLLQE 364 (506)
Q Consensus 290 vD~IalSfV~saedV~~lr~---~l~~~~~~i~IIaKIEt~~aveNldeIl~--~sDGImIaRGDLgvelg~e~V~~~Qk 364 (506)
+|+|.+-.-.+.+++.++.+ .+++.|..+.+-.+-.|+ ++.+++++. ..|.|++-.-+-|.. |..-.+..-+
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~l~ 162 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDMMG 162 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGGHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHHHH
Confidence 99998776554436777777 888888887776666666 778899999 799998764333322 2111222222
Q ss_pred HHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 365 EIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 365 ~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
+|-+..+.. +.++.+...+ .+. .+..++..|+|.+....--...+-|.++++.+++.+.
T Consensus 163 ki~~lr~~~~~~~I~VdGGI--------~~~-----ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 163 KVSFLRKKYKNLNIQVDGGL--------NIE-----TTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHCTTCEEEEESSC--------CHH-----HHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEECCC--------CHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 222222222 5666655321 121 3667788899999875333334469999999987554
No 62
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.24 E-value=2.3 Score=42.76 Aligned_cols=112 Identities=22% Similarity=0.263 Sum_probs=68.8
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCC-C
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELP-I 356 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg-~ 356 (506)
.+.++.+++.|+|+|.+.+=...+.++.+++ . .++++.++-+.+-... ..+. +|+|.+--.+.|-..| .
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~----~--g~~v~~~v~s~~~a~~---a~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKE----N--GTKVIPVVASDSLARM---VERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHH----T--TCEEEEEESSHHHHHH---HHHTTCSCEEEECTTSSEECCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHH----c--CCcEEEEcCCHHHHHH---HHHcCCCEEEEECCCCCccCCCc
Confidence 4566778899999999988765554444443 2 5788888876654433 3334 8999993222322222 1
Q ss_pred CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 357 EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..+. .-+++ .+..++|++.+.-+- + ..|++.++..|+|++++.
T Consensus 163 ~~~~-ll~~i---~~~~~iPviaaGGI~---------~---~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 163 TTFV-LVNKV---SRSVNIPVIAAGGIA---------D---GRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp CHHH-HHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHHTCSEEEES
T ss_pred cHHH-HHHHH---HHHcCCCEEEECCCC---------C---HHHHHHHHHhCCCEEEec
Confidence 1221 11222 334589999875321 1 246888888999999974
No 63
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.66 E-value=2.4 Score=41.77 Aligned_cols=152 Identities=15% Similarity=0.113 Sum_probs=91.0
Q ss_pred CCccCHHHh-HhhHhcCCcEEEEccCCCHH------HHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEE
Q 010610 274 ITEKDWDDI-KFGVDNKVDFYAVSFVKDAQ------VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (506)
Q Consensus 274 ltekD~~dI-~~al~~gvD~IalSfV~sae------dV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImI 345 (506)
++..++..| +...+.|++.|-+.|-.+.+ |..++-+.+.+. .++++.+-+-+ .+.++..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 455555554 45567899998885433333 333433333332 35666555533 3444444444 688887
Q ss_pred cCCCcccC---------CCCCcHHHHHHHHHHHHHHcCCcEE--EEehhhhhhhcCC---CCChhhcccHHH-HHHhCcc
Q 010610 346 ARGDLGAE---------LPIEEVPLLQEEIIRTCRSMGKAVI--VATNMLESMIVHP---TPTRAEVSDIAI-AVREGAD 410 (506)
Q Consensus 346 aRGDLgve---------lg~e~V~~~Qk~II~~c~~~GkPvi--vATqmLeSMi~~~---~PtRAEv~Dvan-av~dG~D 410 (506)
. ++.+ .+.++....-+++++.|+++|+.|- +.+- ...+ +-+..++.+++. +...|+|
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~-----~~~e~~~~~~~~~~~~~~~~~~~~G~d 170 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCV-----VECPYDGPVTPQAVASVTEQLFSLGCH 170 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECS-----SEETTTEECCHHHHHHHHHHHHHHTCS
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEE-----ecCCcCCCCCHHHHHHHHHHHHhcCCC
Confidence 3 3333 5666777888899999999999986 3221 0011 112334444444 4468999
Q ss_pred eeEeeccccCCCCHHHHHHHHHHHHHHH
Q 010610 411 AVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 411 ~vmLs~ETA~G~yPveaV~~m~~I~~~a 438 (506)
.+.|. +|.=.-.|.+.-+.+..|....
T Consensus 171 ~i~l~-Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 171 EVSLG-DTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp EEEEE-ETTSCCCHHHHHHHHHHHHTTS
T ss_pred EEEec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 99998 4554467988888888776543
No 64
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=89.11 E-value=3.1 Score=39.87 Aligned_cols=132 Identities=12% Similarity=0.033 Sum_probs=78.2
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCccc--
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA-- 352 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgv-- 352 (506)
+.+++..+++.|+|+|.+-- ..+++.+.++.+.+++. ...+++.+-|.+-. ....+. +|.|-+.-.++.-
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea---~~a~~~Gad~Ig~~~~g~t~~~ 164 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNEG---ISCHQKGIEFIGTTLSGYTGPI 164 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSSSC
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHHH---HHHHhCCCCEEEecCccCCCCC
Confidence 45678888999999997643 34667777777777664 46677766554322 222233 7888543222211
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
......+ ..++..++.+.|+|... ..-|. .|+..+...|+|++++. |++.+ |-...+.+.
T Consensus 165 ~~~~~~~-----~li~~l~~~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~ 224 (229)
T 3q58_A 165 TPVEPDL-----AMVTQLSHAGCRVIAEG---------RYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFS 224 (229)
T ss_dssp CCSSCCH-----HHHHHHHTTTCCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred cCCCCCH-----HHHHHHHHcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHH
Confidence 1111233 22222233389988653 33333 36778888899999995 56665 766666665
Q ss_pred HH
Q 010610 433 TV 434 (506)
Q Consensus 433 ~I 434 (506)
+.
T Consensus 225 ~~ 226 (229)
T 3q58_A 225 HA 226 (229)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 65
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=89.00 E-value=2.6 Score=43.52 Aligned_cols=119 Identities=18% Similarity=0.306 Sum_probs=69.3
Q ss_pred CHHHhHhhHhcCCcEEEE--ccCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEcCCCccc-
Q 010610 278 DWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGA- 352 (506)
Q Consensus 278 D~~dI~~al~~gvD~Ial--SfV~saedV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIaRGDLgv- 352 (506)
+.+.++.+++.|+|+|.+ ++ .+++.+.++.+.+++.-.+++|++ .+-+.+- +....+. +|+|.++-+ -|.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~---a~~a~~~Gad~I~vg~~-~G~~ 228 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAH-GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEA---ALDLISVGADCLKVGIG-PGSI 228 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHCTTCEEEEEEECSHHH---HHHHHTTTCSEEEECSS-CSTT
T ss_pred HHHHHHHHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHHCCCCeEEEcCCCcHHH---HHHHHhcCCCEEEECCC-CCcC
Confidence 456677788999999987 44 233434444344443322567775 4555433 3333333 899999521 111
Q ss_pred -------CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 353 -------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 353 -------elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
..+... ......+.+.+...++|||.+..+- + ..|+..++..|+|++++
T Consensus 229 ~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~---------~---~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 229 CTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR---------F---SGDVVKAIAAGADSVMI 284 (404)
T ss_dssp SHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC---------S---HHHHHHHHHHTCSEEEE
T ss_pred cCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC---------C---HHHHHHHHHcCCCHHhh
Confidence 012222 2334455555556789998764322 2 34789999999999998
No 66
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=88.49 E-value=6.8 Score=39.73 Aligned_cols=112 Identities=18% Similarity=0.259 Sum_probs=66.5
Q ss_pred HHHhHhhHhcCCcEEEEccCCC-HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEE-cCC---Cccc
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKD-AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV-ARG---DLGA 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~s-aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImI-aRG---DLgv 352 (506)
.+.++.+++.|+|+|.+.|=.. .+.++.+++ . .+.++.++-|.+-. ....+. +|+|.+ ++. -.|.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~a---~~a~~~GaD~i~v~g~~~GGh~g~ 182 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEEA---RAVEAAGADAVIAQGVEAGGHQGT 182 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSEEEEECTTCSEECCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHHH---HHHHHcCCCEEEEeCCCcCCcCCC
Confidence 4566788899999999987543 455555543 2 46788888765432 222223 899999 542 1121
Q ss_pred CCC--------CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 353 ELP--------IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 353 elg--------~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..+ ...+ ..-+++ ....++||+.+..+- + -.++..++..|+|+|++.
T Consensus 183 ~~~~~~~~~~~~~~~-~~l~~i---~~~~~iPViaaGGI~---------~---~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 183 HRDSSEDDGAGIGLL-SLLAQV---REAVDIPVVAAGGIM---------R---GGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SSCCGGGTTCCCCHH-HHHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred cccccccccccccHH-HHHHHH---HHhcCceEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 111 1111 122222 234589999885321 2 235778888999999974
No 67
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=88.41 E-value=7.9 Score=39.11 Aligned_cols=158 Identities=10% Similarity=0.010 Sum_probs=98.0
Q ss_pred CCccCHHHh-H-hhHhcCCcEEEE-ccCCCHHHHHHHHHHHHh-----cCCCceEEEecCChhhhhhHHHHHHh-CCEE-
Q 010610 274 ITEKDWDDI-K-FGVDNKVDFYAV-SFVKDAQVVHELKNYLKS-----CGADIHVIVKIESADSIPNLHSIITA-SDGA- 343 (506)
Q Consensus 274 ltekD~~dI-~-~al~~gvD~Ial-SfV~saedV~~lr~~l~~-----~~~~i~IIaKIEt~~aveNldeIl~~-sDGI- 343 (506)
++..|+..| + ...+.|+|.|=+ +|+.++++.+.++++.+. .-.+..+.+-+=+.. .++..++. .|.|
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v~ 114 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVLN 114 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEEE
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEEE
Confidence 555565555 4 445689999977 677788777776665542 223456666555544 45555544 5644
Q ss_pred -EEcCCCcc----cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeecc
Q 010610 344 -MVARGDLG----AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGE 417 (506)
Q Consensus 344 -mIaRGDLg----velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~E 417 (506)
+++--|+= .-...++.....+.+++.|+++|+.|.+....+ -..++-+...+.+++. +...|+|.+.|. +
T Consensus 115 i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 190 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDW---SNGFRNSPDYVKSLVEHLSKEHIERIFLP-D 190 (337)
T ss_dssp EEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETH---HHHHHHCHHHHHHHHHHHHTSCCSEEEEE-C
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC---CCCCcCCHHHHHHHHHHHHHcCCCEEEEe-c
Confidence 43333321 112334566777889999999999988764220 0011112333455555 455699999995 8
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 010610 418 TAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 418 TA~G~yPveaV~~m~~I~~~a 438 (506)
|.=.-.|.++-+.+..+.++.
T Consensus 191 T~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 191 TLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp TTCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHHHHhc
Confidence 888889999988888887665
No 68
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=88.39 E-value=3.4 Score=43.57 Aligned_cols=121 Identities=18% Similarity=0.244 Sum_probs=69.9
Q ss_pred CHHHhHhhHhcCCcEEEEccCC--CHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcCCCccc-
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDLGA- 352 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~--saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaRGDLgv- 352 (506)
..+.+.++++.|+|.|.+.+.. .....+.++.+-+..+ +.+|+++ +-+.+.. ....+. +|+|.++-|-=+.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p-~~pvi~g~~~t~e~a---~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYP-DLPVVAGNVATPEGT---EALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT-TSCEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCC-CceEEeCCcCCHHHH---HHHHHcCCCEEEEcCCCCccc
Confidence 3567788899999999986543 2223333332222222 3555553 4444433 333333 8999995431010
Q ss_pred ------CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 353 ------ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 353 ------elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..+.+ -......+.+.++..+.|||.+..+- ...|++.++..|+|++++.
T Consensus 314 ~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 314 TTRVVAGVGVP-QLTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCcc-HHHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 01122 23344556666666799999875332 2357999999999999964
No 69
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.39 E-value=3 Score=48.27 Aligned_cols=119 Identities=14% Similarity=0.298 Sum_probs=70.3
Q ss_pred HhhHhcCCcEEEEccC---------------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-----CCE
Q 010610 283 KFGVDNKVDFYAVSFV---------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDG 342 (506)
Q Consensus 283 ~~al~~gvD~IalSfV---------------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-----sDG 342 (506)
+.+.+.|+|+|.+.+- ++++.+.++.+.+++. .+++|++|+ ++ .++++.+++.. +|+
T Consensus 655 ~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d~ 731 (1025)
T 1gte_A 655 RKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARAAKEGGADG 731 (1025)
T ss_dssp HHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHHHHHHTCSE
T ss_pred HHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHHHHHcCCCE
Confidence 3445789999998542 4555555555555443 257899998 33 34455555554 799
Q ss_pred EEEc-----------------------CCCcccCCCCCcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhc
Q 010610 343 AMVA-----------------------RGDLGAELPIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEV 398 (506)
Q Consensus 343 ImIa-----------------------RGDLgvelg~e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv 398 (506)
|.+. |...+---|....+.....+-+..++. +.|+|....+ -| .
T Consensus 732 i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI---------~s---~ 799 (1025)
T 1gte_A 732 VTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGI---------DS---A 799 (1025)
T ss_dssp EEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSC---------CS---H
T ss_pred EEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCc---------CC---H
Confidence 9982 111111112223343333333444455 7898876532 22 3
Q ss_pred ccHHHHHHhCcceeEeec
Q 010610 399 SDIAIAVREGADAVMLSG 416 (506)
Q Consensus 399 ~Dvanav~dG~D~vmLs~ 416 (506)
.|+..++..|+|+||+..
T Consensus 800 ~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 800 ESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHcCCCEEEEee
Confidence 578889999999999963
No 70
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=88.16 E-value=4.9 Score=38.46 Aligned_cols=103 Identities=14% Similarity=0.199 Sum_probs=68.9
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCc
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~ 358 (506)
+.++.+++.|+++|-+.+ ++....+.++++.++.. +..+-+-. .---+.++.-+++ +|+++.+-.|
T Consensus 33 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~~-~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d--------- 99 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITF-RSEAAADAIRLLRANRP-DFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN--------- 99 (224)
T ss_dssp HHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHCT-TCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC---------
T ss_pred HHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhCc-CcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC---------
Confidence 445678899999999996 56666666666555543 44444432 2222555555555 8999755333
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 359 V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
..+++.|++.|+|++.-+. .|+ ++..+...|+|.+.+
T Consensus 100 -----~~v~~~ar~~g~~~i~Gv~---------t~~-----e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----PKIVKLCQDLNFPITPGVN---------NPM-----AIEIALEMGISAVKF 136 (224)
T ss_dssp -----HHHHHHHHHTTCCEECEEC---------SHH-----HHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEeccC---------CHH-----HHHHHHHCCCCEEEE
Confidence 4578899999999876421 233 367889999999999
No 71
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.11 E-value=4 Score=38.32 Aligned_cols=137 Identities=16% Similarity=0.172 Sum_probs=77.2
Q ss_pred HHhHhhHhcCCcEEEEccC--CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEc---CCCcccCC
Q 010610 280 DDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVA---RGDLGAEL 354 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV--~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIa---RGDLgvel 354 (506)
+.++.+.+.|+|+|.+..- .+ ++..++.+.+.+.|..+.+...-.| -.+.+.++...+|.|++. +|--|...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g~~ig~~~~p~t--~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLGAKAGVVLNPGT--PLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTTSEEEEEECTTC--CGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 4677778899999988765 44 3445555566555543333322133 234455555668877432 34333333
Q ss_pred CCCcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 355 PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 355 g~e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
... ...-.+++-+.+... +.|+++... -.| ..+..++..|+|++....--...+.|.++++.+.
T Consensus 159 ~~~-~~~~i~~l~~~~~~~~~~~pi~v~GG--------I~~-----~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 IES-QVKKISDLRKICAERGLNPWIEVDGG--------VGP-----KNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp CTT-HHHHHHHHHHHHHHHTCCCEEEEESS--------CCT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred cHH-HHHHHHHHHHHHHhcCCCceEEEECC--------CCH-----HHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 322 222223333333222 677766532 123 2466677779999998765555567988888775
Q ss_pred H
Q 010610 433 T 433 (506)
Q Consensus 433 ~ 433 (506)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 72
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.83 E-value=7.1 Score=37.31 Aligned_cols=117 Identities=11% Similarity=0.115 Sum_probs=74.7
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e 357 (506)
.+.++.+++.|+++|-+.+ ++....+.++.+.++. .+..+-+-. .---+.++.-+++ +|+++.+--|
T Consensus 41 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d-------- 108 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT-------- 108 (225)
T ss_dssp HHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC--------
T ss_pred HHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC--------
Confidence 3445677899999999996 5555555555554443 345554432 2122455555555 8999854222
Q ss_pred cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHH---HHHHHH
Q 010610 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAV---KVMHTV 434 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV---~~m~~I 434 (506)
..+++.|+.+|.|.+.-+. .| +++..+...|+|.+.+ ||.+.+ ++++.+
T Consensus 109 ------~~v~~~~~~~g~~~i~G~~---------t~-----~e~~~A~~~Gad~vk~--------FPa~~~~G~~~lk~i 160 (225)
T 1mxs_A 109 ------EDILEAGVDSEIPLLPGIS---------TP-----SEIMMGYALGYRRFKL--------FPAEISGGVAAIKAF 160 (225)
T ss_dssp ------HHHHHHHHHCSSCEECEEC---------SH-----HHHHHHHTTTCCEEEE--------TTHHHHTHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCEEEeeC---------CH-----HHHHHHHHCCCCEEEE--------ccCccccCHHHHHHH
Confidence 3688999999999875321 23 2367899999999999 885543 555554
Q ss_pred H
Q 010610 435 S 435 (506)
Q Consensus 435 ~ 435 (506)
.
T Consensus 161 ~ 161 (225)
T 1mxs_A 161 G 161 (225)
T ss_dssp H
T ss_pred H
Confidence 4
No 73
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=87.80 E-value=1.5 Score=41.18 Aligned_cols=138 Identities=12% Similarity=0.090 Sum_probs=78.5
Q ss_pred HhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceE-EEecCChhhhhhHHHHHH-hCCEEEEcCCCcccCCCCCc
Q 010610 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIIT-ASDGAMVARGDLGAELPIEE 358 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~I-IaKIEt~~aveNldeIl~-~sDGImIaRGDLgvelg~e~ 358 (506)
.++.+.+.|+|+|.+......+.++++.+.+++.|....+ +...-|. +.+.++.+ -.|.+.+..|-.+-.-|..-
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~---~~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 151 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTM---QDAKAWVDLGITQAIYHRSRDAELAGIGW 151 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCH---HHHHHHHHTTCCEEEEECCHHHHHHTCCS
T ss_pred HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCH---HHHHHHHHcCccceeeeeccccccCCCcC
Confidence 3466778999999998776666788888888877765554 4445565 34444444 36866554332111001111
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 359 V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
.+..-++| ++.+..+.|+.+...+ .|. .+..++..|+|++...+--...+.|.+++ .+.+..+
T Consensus 152 ~~~~l~~i-~~~~~~~~pi~v~GGI--------~~~-----~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 152 TTDDLDKM-RQLSALGIELSITGGI--------VPE-----DIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp CHHHHHHH-HHHHHTTCEEEEESSC--------CGG-----GGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred CHHHHHHH-HHHhCCCCCEEEECCC--------CHH-----HHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 12222222 2222356777664321 222 23457888999999864433345588887 6666554
No 74
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=87.57 E-value=6.6 Score=37.18 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=68.8
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e 357 (506)
.+.++.+++.|+++|-+.+ ++....+.++.+.++.. +..+-+-. .---+.++.-+++ +|+++.+--|
T Consensus 31 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~~-~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d-------- 98 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEVP-EAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT-------- 98 (214)
T ss_dssp HHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHCT-TSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC--------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHCc-CCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC--------
Confidence 3445678899999999996 55666656655554443 44444432 1112555555555 8999865322
Q ss_pred cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
..+++.|+.+|.|.+.-+. .|+ ++..+...|+|.+.+
T Consensus 99 ------~~v~~~~~~~g~~~i~G~~---------t~~-----e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 ------EPLLKAATEGTIPLIPGIS---------TVS-----ELMLGMDYGLKEFKF 135 (214)
T ss_dssp ------HHHHHHHHHSSSCEEEEES---------SHH-----HHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEEecC---------CHH-----HHHHHHHCCCCEEEE
Confidence 3688999999999886431 233 367889999999998
No 75
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=87.48 E-value=2.5 Score=44.29 Aligned_cols=152 Identities=20% Similarity=0.271 Sum_probs=97.8
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHH---HHHhcCCCceEEEecC--ChhhhhhHHHHHHhCCEEEEcCCCcccCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKN---YLKSCGADIHVIVKIE--SADSIPNLHSIITASDGAMVARGDLGAEL 354 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~---~l~~~~~~i~IIaKIE--t~~aveNldeIl~~sDGImIaRGDLgvel 354 (506)
+.|....+.|+|.|-++ |.+.++.+.+++ .|...+.+++++|-|= -.-|+..+++..+..|.+=|-||.+|-.
T Consensus 42 ~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~- 119 (406)
T 4g9p_A 42 AQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG- 119 (406)
T ss_dssp HHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST-
T ss_pred HHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc-
Confidence 33455567999998887 777777766654 4555678899999764 3557777788888899999999987631
Q ss_pred CCCcHHHHHHHHHHHHHHcCCcEEEEe-------hhhhhhh----cCCCCChh-----h--ccc----HHHHHHhCc--c
Q 010610 355 PIEEVPLLQEEIIRTCRSMGKAVIVAT-------NMLESMI----VHPTPTRA-----E--VSD----IAIAVREGA--D 410 (506)
Q Consensus 355 g~e~V~~~Qk~II~~c~~~GkPvivAT-------qmLeSMi----~~~~PtRA-----E--v~D----vanav~dG~--D 410 (506)
.+...--+.++++|+++|+|+=+-+ .+|+.+. ..|.|.-+ | +.- +.-+...|. |
T Consensus 120 --~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~ 197 (406)
T 4g9p_A 120 --RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGED 197 (406)
T ss_dssp --HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred --ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChh
Confidence 2233445689999999999975554 2343332 23445321 2 111 111223455 6
Q ss_pred eeEeeccccCCCCHHHHHHHHHHHHHHH
Q 010610 411 AVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 411 ~vmLs~ETA~G~yPveaV~~m~~I~~~a 438 (506)
=+++|--.+ -+...|+.-+.++++.
T Consensus 198 ~iviS~KaS---dv~~~i~aYr~la~~~ 222 (406)
T 4g9p_A 198 KLVLSAKVS---KARDLVWVYRELARRT 222 (406)
T ss_dssp GEEEEEECS---SHHHHHHHHHHHHHHC
T ss_pred heEEEeecC---CHHHHHHHHHHHHHhC
Confidence 688874433 4677777766666554
No 76
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.48 E-value=4.6 Score=40.22 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=65.8
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH-hCCEEEE-cCCCcccCCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-ASDGAMV-ARGDLGAELPI 356 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~-~sDGImI-aRGDLgvelg~ 356 (506)
.+.++.+++.|+|+|.+.+=...+.++.+ ++. .++++.++-+.+... ...+ -+|+|.+ ++ .-|-..|.
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l----~~~--gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~-~~GG~~G~ 155 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEF----RRH--GVKVIHKCTAVRHAL---KAERLGVDAVSIDGF-ECAGHPGE 155 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHH----HHT--TCEEEEEESSHHHHH---HHHHTTCSEEEEECT-TCSBCCCS
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHH----HHc--CCCEEeeCCCHHHHH---HHHHcCCCEEEEECC-CCCcCCCC
Confidence 35677888999999999876554444443 333 477888887654332 2222 3899998 43 11211121
Q ss_pred CcHHHHHHHHHHHH-HHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 357 EEVPLLQEEIIRTC-RSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 357 e~V~~~Qk~II~~c-~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
...+.. ..+... ...++|++.+..+- + -.|+..++..|+|++++.
T Consensus 156 ~~~~~~--~~l~~v~~~~~iPviaaGGI~---------~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 156 DDIPGL--VLLPAAANRLRVPIIASGGFA---------D---GRGLVAALALGADAINMG 201 (328)
T ss_dssp SCCCHH--HHHHHHHTTCCSCEEEESSCC---------S---HHHHHHHHHHTCSEEEES
T ss_pred ccccHH--HHHHHHHHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 111111 222222 24489999885321 2 235778888899999974
No 77
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=87.12 E-value=5.8 Score=36.91 Aligned_cols=133 Identities=9% Similarity=-0.004 Sum_probs=74.1
Q ss_pred hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHH-HhCCEEEEcCCCcccCCCCCcHH
Q 010610 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII-TASDGAMVARGDLGAELPIEEVP 360 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl-~~sDGImIaRGDLgvelg~e~V~ 360 (506)
++.+.+.|+|+|-+..-. ..+..+++.. . ...+.+-+.|.+-+ .+.. .-+|.|+++..--+...+- ..+
T Consensus 81 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~---~-~~~ig~sv~t~~~~---~~a~~~gaD~i~~~~~f~~~~~~g-~~~ 150 (221)
T 1yad_A 81 VDIALFSTIHRVQLPSGS--FSPKQIRARF---P-HLHIGRSVHSLEEA---VQAEKEDADYVLFGHVFETDCKKG-LEG 150 (221)
T ss_dssp HHHHHTTTCCEEEECTTS--CCHHHHHHHC---T-TCEEEEEECSHHHH---HHHHHTTCSEEEEECCC-----------
T ss_pred HHHHHHcCCCEEEeCCCc--cCHHHHHHHC---C-CCEEEEEcCCHHHH---HHHHhCCCCEEEECCccccCCCCC-CCC
Confidence 356778999999887542 2345555543 1 34455555554332 2222 2389999986311111100 001
Q ss_pred HHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHH
Q 010610 361 LLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 361 ~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~ 437 (506)
.-.+.+-+.++..++|++.+.. . +. .++..++..|+|++.+.+---..+.|.++++.+.+.+++
T Consensus 151 ~~~~~l~~~~~~~~~pvia~GG---------I-~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAIGG---------M-TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEESS---------C-CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEECC---------C-CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 1122333334455899888753 2 22 357788889999999875444445688888888766543
No 78
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=86.91 E-value=5.5 Score=37.41 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=65.8
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e 357 (506)
.+.++.+++.|+++|-+.+ +++...+.++. +.+ .+..+-+-. .---+.++.-+++ +|++..+-.|
T Consensus 28 ~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~-~~~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d-------- 93 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-RTEKGLEALKA-LRK--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL-------- 93 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-SSTHHHHHHHH-HTT--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC--------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChHHHHHHHH-HhC--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC--------
Confidence 3445677889999999996 55555544444 333 444444433 2122555555555 8999765322
Q ss_pred cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
..+++.|+..|.|++.-+. |. +++..+...|+|.+.+
T Consensus 94 ------~~v~~~~~~~g~~~i~G~~-----------t~---~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 ------EEVAALAQARGVPYLPGVL-----------TP---TEVERALALGLSALKF 130 (207)
T ss_dssp ------HHHHHHHHHHTCCEEEEEC-----------SH---HHHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEecCC-----------CH---HHHHHHHHCCCCEEEE
Confidence 2678899999999886431 22 2367888999999988
No 79
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=86.27 E-value=1.4 Score=41.86 Aligned_cols=46 Identities=20% Similarity=0.100 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEeC
Q 010610 460 SEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTN 505 (506)
Q Consensus 460 ~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~pIia~T~ 505 (506)
++.....|++-|.+++. .|||.|.||.||+.+...-....+++||+
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh 74 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTY 74 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeC
Confidence 45666678899999999 99999999999999999877789999985
No 80
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=86.14 E-value=7.1 Score=38.93 Aligned_cols=116 Identities=18% Similarity=0.229 Sum_probs=62.5
Q ss_pred cCCcEEEEccC----------CCH----HHHHHHHHHHHh----cCCCceEEEecCChhhhhhHHHHHHh-----CCEEE
Q 010610 288 NKVDFYAVSFV----------KDA----QVVHELKNYLKS----CGADIHVIVKIESADSIPNLHSIITA-----SDGAM 344 (506)
Q Consensus 288 ~gvD~IalSfV----------~sa----edV~~lr~~l~~----~~~~i~IIaKIEt~~aveNldeIl~~-----sDGIm 344 (506)
.|+|+|-+.|- ++. +.++.+|+...+ .|.+.+|+.||=.--..+++.++++. +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 48999988762 112 344445544422 14578999997422112233333332 79999
Q ss_pred EcCCCccc----------CCC-CC--cHHHHHHHHHHHHH-Hc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhC
Q 010610 345 VARGDLGA----------ELP-IE--EVPLLQEEIIRTCR-SM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (506)
Q Consensus 345 IaRGDLgv----------elg-~e--~V~~~Qk~II~~c~-~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG 408 (506)
+.-+-.+. +.+ +. .+....-..++..+ .. +.|||....+- + ..|+..++..|
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~---------~---~~da~~~l~~G 311 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGID---------S---VIAAREKIAAG 311 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCC---------S---HHHHHHHHHHT
T ss_pred EeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCC---------C---HHHHHHHHHCC
Confidence 85321111 111 11 11122323444443 34 78998775322 2 34788899999
Q ss_pred cceeEee
Q 010610 409 ADAVMLS 415 (506)
Q Consensus 409 ~D~vmLs 415 (506)
+|+|++.
T Consensus 312 Ad~V~ig 318 (336)
T 1f76_A 312 ASLVQIY 318 (336)
T ss_dssp CSEEEES
T ss_pred CCEEEee
Confidence 9999996
No 81
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=85.80 E-value=9.9 Score=37.41 Aligned_cols=131 Identities=17% Similarity=0.159 Sum_probs=81.4
Q ss_pred HHHhHhhHhcCCcEEEEc-cCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCccc-CCC
Q 010610 279 WDDIKFGVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA-ELP 355 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalS-fV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgv-elg 355 (506)
...+..+...|+|+|.+. -.-+.+++.++.++..+.|-. +++-+-|.+-++. .++. +|.|-+...||.. +.+
T Consensus 125 ~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~--~lvev~t~ee~~~---A~~~Gad~IGv~~r~l~~~~~d 199 (272)
T 3qja_A 125 PYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMT--ALVEVHTEQEADR---ALKAGAKVIGVNARDLMTLDVD 199 (272)
T ss_dssp HHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCE--EEEEESSHHHHHH---HHHHTCSEEEEESBCTTTCCBC
T ss_pred HHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCc--EEEEcCCHHHHHH---HHHCCCCEEEECCCcccccccC
Confidence 345778889999999882 233467788888877776544 4555555443332 2233 7999998767643 223
Q ss_pred CCcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHH
Q 010610 356 IEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 433 (506)
Q Consensus 356 ~e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~ 433 (506)
++.+ +++ +... ++|++... .+-|. .|+..+...|+|+++...---....|-++++.+..
T Consensus 200 l~~~----~~l---~~~v~~~~pvVaeg---------GI~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 200 RDCF----ARI---APGLPSSVIRIAES---------GVRGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp TTHH----HHH---GGGSCTTSEEEEES---------CCCSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred HHHH----HHH---HHhCcccCEEEEEC---------CCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 3322 122 2233 67877643 33333 36778888899999985443445679888887753
No 82
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=85.08 E-value=5.8 Score=39.93 Aligned_cols=121 Identities=16% Similarity=0.247 Sum_probs=65.7
Q ss_pred ccCHHHhHhhHhcC--CcEEEEccCC-CHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcC--C
Q 010610 276 EKDWDDIKFGVDNK--VDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVAR--G 348 (506)
Q Consensus 276 ekD~~dI~~al~~g--vD~IalSfV~-saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaR--G 348 (506)
+.+.+.++...+.| +|+|.+..-. +.....+.-+.+.+.-..+.|+.. |-+. +......+. +|+|.++- |
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~---e~A~~a~~aGad~Ivvs~hgG 181 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTP---EAVRELENAGADATKVGIGPG 181 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCH---HHHHHHHHcCCCEEEEecCCC
Confidence 34556667778888 9998764321 222222222222222223566654 5443 344444444 89999941 1
Q ss_pred C-------cccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 349 D-------LGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 349 D-------Lgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
= .+...| .+ ....+.+.+++.++|||.+.-+- .-.|+..++..|+|++|+.
T Consensus 182 ~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 182 KVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp TTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEES
T ss_pred ceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeC
Confidence 0 111111 00 12234444455589999875322 2458999999999999974
No 83
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=84.74 E-value=6.3 Score=36.90 Aligned_cols=112 Identities=22% Similarity=0.241 Sum_probs=67.1
Q ss_pred HHHhHhhHhcCCcEEEEc-----cCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 279 WDDIKFGVDNKVDFYAVS-----FVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalS-----fV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRG 348 (506)
.++++.+.+.|+|+|-+- |+.+ .+.++++++.+ +....+..++..++ +.++...++ +|+|.+.-.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEec
Confidence 345677788999998874 5554 45555555432 34556777888743 456666665 899988521
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.. +.+.. ...++.++++|+.++++.. |. |..| ...++..++|.+++-
T Consensus 101 -~~---~~~~~----~~~~~~~~~~g~~ig~~~~--------p~-t~~e---~~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 101 -QS---STIHL----HRTINQIKSLGAKAGVVLN--------PG-TPLT---AIEYVLDAVDLVLIM 147 (230)
T ss_dssp -TT---TCSCH----HHHHHHHHHTTSEEEEEEC--------TT-CCGG---GGTTTTTTCSEEEEE
T ss_pred -Cc---cchhH----HHHHHHHHHcCCcEEEEeC--------CC-CCHH---HHHHHHhhCCEEEEE
Confidence 00 11232 4677888888999888741 11 1112 223445788988543
No 84
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=84.58 E-value=7.3 Score=35.59 Aligned_cols=131 Identities=8% Similarity=0.022 Sum_probs=70.8
Q ss_pred hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCC-C--cccCCCCCc
Q 010610 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARG-D--LGAELPIEE 358 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRG-D--Lgvelg~e~ 358 (506)
++.+.+.|+|+|.++.-.- ++..++++. ....+..-+.|++.+... ...-+|.+++... + -.-......
T Consensus 79 ~~~a~~~gad~v~l~~~~~--~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~ 150 (215)
T 1xi3_A 79 VDVALAVDADGVQLGPEDM--PIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIG 150 (215)
T ss_dssp HHHHHHHTCSEEEECTTSC--CHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCH
T ss_pred HHHHHHcCCCEEEECCccC--CHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcC
Confidence 4567788999998874321 233444432 234444455665443221 1123899998541 1 000000111
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHH
Q 010610 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 359 V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~ 437 (506)
+. ..+++ ++...+|++.+.. -+ ..++..+...|+|++.++.---..+-|.+.++.+.+.+++
T Consensus 151 ~~-~l~~l---~~~~~~pvia~GG----------I~---~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 151 LE-GLRKI---VESVKIPVVAIGG----------IN---KDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp HH-HHHHH---HHHCSSCEEEESS----------CC---TTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HH-HHHHH---HHhCCCCEEEECC----------cC---HHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 11 11222 3344889887742 12 2257777788999999875444445687788877766654
No 85
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=83.96 E-value=9.8 Score=35.45 Aligned_cols=136 Identities=10% Similarity=0.088 Sum_probs=78.0
Q ss_pred hhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceE-EE-ecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHH
Q 010610 284 FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IV-KIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPL 361 (506)
Q Consensus 284 ~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~I-Ia-KIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~ 361 (506)
.+.+.|+|+|.+..--..+.++.+.+.+++.|....+ +. -+ |..-.+.+.++ . .+-+...++-++++.|+...+.
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 5668999999998766666688888888877665332 11 11 12233444443 1 3445555555566666543222
Q ss_pred HHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 362 LQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 362 ~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
-.+.+-+.+ ..+.|+++...+ .|.. +..++..|+|.+....--...+-|.++++.+.+.+.
T Consensus 152 ~i~~lr~~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIA 212 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHH
Confidence 223333333 335666664321 2221 455778899999875433334469999988877654
No 86
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=83.87 E-value=9.2 Score=37.25 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=77.3
Q ss_pred CccCHHH-hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhh----------hhHHHHHHh-CCE
Q 010610 275 TEKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI----------PNLHSIITA-SDG 342 (506)
Q Consensus 275 tekD~~d-I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~av----------eNldeIl~~-sDG 342 (506)
+..|.+. ++.+++.|++.|+++ +.-+.... ..++.++.|+.+..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 4556444 467889999999988 23333322 3447788888776655 456666665 787
Q ss_pred EEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhh-hhcCCCCChhhcccH-HHHHHhCcceeEee
Q 010610 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES-MIVHPTPTRAEVSDI-AIAVREGADAVMLS 415 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeS-Mi~~~~PtRAEv~Dv-anav~dG~D~vmLs 415 (506)
|-+ |-+++ +-...++...-+++...|+++|.|+|+-+. +.- -+.+. .+..++... --+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~~-~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVNE-TAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCCT-TCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCccccC-CCHHHHHHHHHHHHHcCCCEEEEc
Confidence 754 33344 223345666778899999999999886321 100 00000 033444443 34778999998887
No 87
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=83.43 E-value=11 Score=40.00 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=73.7
Q ss_pred HHHhHhhHhcCCcEEEEccC--CCHHHHHHHHHHHHhcCCC-ceEE-EecCChhhhhhHHHHHHhCCEEEEcCCCccc--
Q 010610 279 WDDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGAD-IHVI-VKIESADSIPNLHSIITASDGAMVARGDLGA-- 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV--~saedV~~lr~~l~~~~~~-i~II-aKIEt~~aveNldeIl~~sDGImIaRGDLgv-- 352 (506)
.+.++...+.|++.+.+..- .+...+..+ +.+.+...+ +.++ ..|.+.+..+.+-+. -+|++.+|-|-=+.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~a--Gad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLADA--GADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHHH--TCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHHh--CCCeEEecccCCcCcc
Confidence 44566777889999887322 222222222 333333223 5555 468888777655432 38999987532111
Q ss_pred -----CCCCCcHHHHHHHHHHHHHHc------CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 353 -----ELPIEEVPLLQEEIIRTCRSM------GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 353 -----elg~e~V~~~Qk~II~~c~~~------GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..|.+ -..+..++.+.|+.. ++|+|.+..+. + -.|++.|+..|||++|+.
T Consensus 321 ~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~---------~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 321 TREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV---------Y---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 11222 334556777788877 89999875433 2 357999999999999985
No 88
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=83.37 E-value=10 Score=34.94 Aligned_cols=128 Identities=8% Similarity=0.023 Sum_probs=70.2
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcH
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEV 359 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V 359 (506)
++++.+++.|+|+|.++. ...+ +.+..++.|.. ++.-+.|++-+. .....-+|.|.+-+++ ..++
T Consensus 71 ~~i~~a~~~Gad~V~~~~-~~~~----~~~~~~~~g~~--~~~g~~t~~e~~--~a~~~G~d~v~v~~t~---~~g~--- 135 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN-IHSE----VIRRAVGYGMT--VCPGCATATEAF--TALEAGAQALKIFPSS---AFGP--- 135 (212)
T ss_dssp HHHHHHHHTTCCEEECSS-CCHH----HHHHHHHTTCE--EECEECSHHHHH--HHHHTTCSEEEETTHH---HHCH---
T ss_pred HHHHHHHHcCCCEEEeCC-CCHH----HHHHHHHcCCC--EEeecCCHHHHH--HHHHCCCCEEEEecCC---CCCH---
Confidence 578889999999998664 2222 22334444433 333344433221 1111227999874432 1121
Q ss_pred HHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCC----CCHHHHHHHHHH
Q 010610 360 PLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAVKVMHT 433 (506)
Q Consensus 360 ~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G----~yPveaV~~m~~ 433 (506)
..+-+.++.. +.|++....+ + ..++..+...|+|++....--..+ .-|.++++.+.+
T Consensus 136 ----~~~~~l~~~~~~~ipvia~GGI----------~---~~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 136 ----QYIKALKAVLPSDIAVFAVGGV----------T---PENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp ----HHHHHHHTTSCTTCEEEEESSC----------C---TTTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhccCCCeEEEeCCC----------C---HHHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH
Confidence 2222223333 3788776421 2 236777888999999975332222 357788887777
Q ss_pred HHHHHh
Q 010610 434 VSLRTE 439 (506)
Q Consensus 434 I~~~aE 439 (506)
++.++-
T Consensus 199 ~~~~~~ 204 (212)
T 2v82_A 199 AYREAV 204 (212)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766554
No 89
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=83.21 E-value=2.1 Score=40.77 Aligned_cols=45 Identities=24% Similarity=0.243 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEeC
Q 010610 460 SEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTN 505 (506)
Q Consensus 460 ~~~ia~~av~~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~pIia~T~ 505 (506)
++.....|++-|.+++. .|||.|.||.||+++...-.. .+++||+
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh 81 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTH 81 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeC
Confidence 45666678899999999 999999999999999986644 8999985
No 90
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=82.87 E-value=16 Score=34.93 Aligned_cols=136 Identities=11% Similarity=0.048 Sum_probs=77.8
Q ss_pred HHHhHhhHhcCCcEE--EEcc-CCCH----HHHHHHHHHHHhcCCCceEEEecCChhh--------hhhHHHHHHh----
Q 010610 279 WDDIKFGVDNKVDFY--AVSF-VKDA----QVVHELKNYLKSCGADIHVIVKIESADS--------IPNLHSIITA---- 339 (506)
Q Consensus 279 ~~dI~~al~~gvD~I--alSf-V~sa----edV~~lr~~l~~~~~~i~IIaKIEt~~a--------veNldeIl~~---- 339 (506)
.+.++.+++.|+|+| .+.. ..+. +++.++.+.+.+.|. .++..+- +.| .+++++....
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~--~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGM--PLIAMMY-PRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTC--CEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCC--CEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHc
Confidence 456778899999999 3321 1222 245566666655543 3444430 111 1344443222
Q ss_pred -CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCC-Chhhcc-cHHHHHHhCcceeEeec
Q 010610 340 -SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTP-TRAEVS-DIAIAVREGADAVMLSG 416 (506)
Q Consensus 340 -sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~P-tRAEv~-Dvanav~dG~D~vmLs~ 416 (506)
+|.|-++.+ .+ +. .+-+.+...+.|++.+..+ .+ +..+.- .+..++..|+|+++...
T Consensus 179 Gad~i~~~~~-----~~---~~----~l~~i~~~~~ipvva~GGi--------~~~~~~~~~~~~~~~~~~Ga~gv~vg~ 238 (273)
T 2qjg_A 179 GADIVKTSYT-----GD---ID----SFRDVVKGCPAPVVVAGGP--------KTNTDEEFLQMIKDAMEAGAAGVAVGR 238 (273)
T ss_dssp TCSEEEECCC-----SS---HH----HHHHHHHHCSSCEEEECCS--------CCSSHHHHHHHHHHHHHHTCSEEECCH
T ss_pred CCCEEEECCC-----CC---HH----HHHHHHHhCCCCEEEEeCC--------CCCCHHHHHHHHHHHHHcCCcEEEeeH
Confidence 798888741 12 21 2222344558998876421 11 122211 16667789999999876
Q ss_pred cccCCCCHHHHHHHHHHHHHH
Q 010610 417 ETAHGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~ 437 (506)
.--....|.++++.+.+++.+
T Consensus 239 ~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 239 NIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHHTSSSHHHHHHHHHHHHHH
T ss_pred HhhCCCCHHHHHHHHHHHHhc
Confidence 666677899999888887754
No 91
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=82.82 E-value=17 Score=34.24 Aligned_cols=120 Identities=18% Similarity=0.145 Sum_probs=70.4
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEE--EcC-CCcccCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM--VAR-GDLGAELP 355 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGIm--IaR-GDLgvelg 355 (506)
.+.++.+++.|+|+|.++.. ..++..++.+++++.|.+..+..... ...+.+..+...+|+++ +.+ |-.|..-+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~~~--t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKTVFLAAPN--TPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEEEEEECTT--CCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCeEEEECCC--CHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 35778889999999999854 44678888888887776544444332 34556777777788443 222 22222211
Q ss_pred CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 356 IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 356 ~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
. -+...+.+-+.++..+.|+++... .-+ ..++..+...|+|++.+.
T Consensus 175 ~--~~~~~~~i~~l~~~~~~pi~~~GG---------I~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 I--PKTAYDLLRRAKRICRNKVAVGFG---------VSK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--CHHHHHHHHHHHHHCSSCEEEESC---------CCS---HHHHHHHHHTTCSEEEEC
T ss_pred C--ChhHHHHHHHHHhhcCCCEEEEee---------cCC---HHHHHHHHHcCCCEEEEc
Confidence 1 122233333334445799887642 212 235777778899999874
No 92
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=82.28 E-value=13 Score=39.08 Aligned_cols=119 Identities=21% Similarity=0.226 Sum_probs=72.3
Q ss_pred HHHhHhhHhcCCcEEEEccC--CCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHhCCEEEEcCCCccc---
Q 010610 279 WDDIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITASDGAMVARGDLGA--- 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV--~saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~sDGImIaRGDLgv--- 352 (506)
.+.+.+.++.|+|.+.+.-. .+..-+..++. +...- .+++|+| |-++++...+- -+|+|.+|.|-=+.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 56677888999998876532 22333333433 33222 5777774 77777665544 68999995432111
Q ss_pred ----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 353 ----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 353 ----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
..|.. .......+-+.+.+.+.|||.+..+. + -.|++.|+..|+|++|+..
T Consensus 304 r~~~~~g~~-~~~~l~~~~~~~~~~~vpVia~GGi~---------~---~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 304 RIVAGVGVP-QITAVAMVADRAQEYGLYVIADGGIR---------Y---SGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp HHHTCCCCC-HHHHHHHHHHHHHHHTCEEEEESCCC---------S---HHHHHHHHHTTCSEEEEST
T ss_pred eEEeecCcc-hHHHHHHHHHHHHHcCCcEEecCCCC---------C---HHHHHHHHHcCCCceeeCh
Confidence 11222 22333444555666789998765332 2 3579999999999999753
No 93
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=82.08 E-value=20 Score=37.45 Aligned_cols=122 Identities=16% Similarity=0.218 Sum_probs=73.7
Q ss_pred cCHHHhHhhHhcCCcEEEEccCC-CHHH-HHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEcCCC--c
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVK-DAQV-VHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGD--L 350 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~-saed-V~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIaRGD--L 350 (506)
...+.++++++.|+|.|.+.... ..+. ...++.+.... ..+.+++ .+-+.+.... .++. +|+|.++-|- .
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~-p~~pvi~G~v~t~~~a~~---~~~~Gad~I~vg~g~g~~ 308 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF-PNRTLIAGNIATAEGARA---LYDAGVDVVKVGIGPGSI 308 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC-SSSCEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTT
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC-CCCcEeCCCccCHHHHHH---HHHcCCCEEEECccCCcc
Confidence 34677889999999999987642 1222 22233322222 2444443 5666544433 3333 8999997431 0
Q ss_pred cc-----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 351 GA-----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 351 gv-----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
+. ..+. ......+++...++..+.|+|....+- -..|++.++..|+|++++.
T Consensus 309 ~~tr~~~~~~~-p~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 309 CTTRVVAGVGV-PQVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp BCHHHHTCCCC-CHHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred eEEeeecCCCC-CcHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeC
Confidence 00 1122 234455777788888999998765322 2357999999999999983
No 94
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=81.74 E-value=12 Score=35.05 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=72.0
Q ss_pred CHHHhHhhHhcCCcEEEEccCCC--H--HHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEE---EEcC--
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKD--A--QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGA---MVAR-- 347 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~s--a--edV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGI---mIaR-- 347 (506)
+.+.++.+++.|+|+|.+..... + +.+.++.+.+++......++..+.|.+-. ....+. +|.| +.+.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea---~~a~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEG---LVAHQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSST
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHH---HHHHHcCCCEEeeeccccCC
Confidence 56778889999999998765432 2 12233333333333356788877765442 222222 7887 2232
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHH
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKA 427 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPvea 427 (506)
+..+. .+ ..+..+ +++ +.. +.|++.... .-|. .|+..++..|+|++++.. ++=+ |.++
T Consensus 167 ~~~~~-~~-~~~~~i-~~~---~~~-~ipvia~GG---------I~s~---~~~~~~~~~Gad~v~vGs--al~~-p~~~ 224 (234)
T 1yxy_A 167 YSRQE-AG-PDVALI-EAL---CKA-GIAVIAEGK---------IHSP---EEAKKINDLGVAGIVVGG--AITR-PKEI 224 (234)
T ss_dssp TSCCS-SS-CCHHHH-HHH---HHT-TCCEEEESC---------CCSH---HHHHHHHTTCCSEEEECH--HHHC-HHHH
T ss_pred CCcCC-CC-CCHHHH-HHH---HhC-CCCEEEECC---------CCCH---HHHHHHHHCCCCEEEEch--HHhC-hHHH
Confidence 22111 11 233222 222 223 899887642 2222 356677778999999853 2222 8777
Q ss_pred HHHHHHH
Q 010610 428 VKVMHTV 434 (506)
Q Consensus 428 V~~m~~I 434 (506)
++.+.+.
T Consensus 225 ~~~l~~~ 231 (234)
T 1yxy_A 225 AERFIEA 231 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 95
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=81.57 E-value=28 Score=34.96 Aligned_cols=158 Identities=11% Similarity=0.055 Sum_probs=99.4
Q ss_pred CCccCHHHh-HhhHhcCCcEEEEc-cCCCHHHHHHHHHHHHhcCCCceEEEec-CChhhhhhHHHHHHh--CC--EEEEc
Q 010610 274 ITEKDWDDI-KFGVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLHSIITA--SD--GAMVA 346 (506)
Q Consensus 274 ltekD~~dI-~~al~~gvD~IalS-fV~saedV~~lr~~l~~~~~~i~IIaKI-Et~~aveNldeIl~~--sD--GImIa 346 (506)
++..|+..| +...+.|+|.|=+. ++-++.|.+.++.+.+. ..++.+.+-. =+.++++..-+-+.- .| .++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 344555555 44556899999775 45688888888776654 3455555543 234455432222221 23 35666
Q ss_pred CCCccc----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHH-HhCcceeEeeccccCC
Q 010610 347 RGDLGA----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV-REGADAVMLSGETAHG 421 (506)
Q Consensus 347 RGDLgv----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav-~dG~D~vmLs~ETA~G 421 (506)
--|+-. ....++.....+.+++.|+++|+.|.+... -++ +-+...+.+++..+ ..|+|.|-| .+|.=.
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~-d~~-----~~~~~~~~~~~~~~~~~G~~~i~l-~DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE-DAG-----RADQAFLARMVEAVIEAGADVVNI-PDTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE-TGG-----GSCHHHHHHHHHHHHHHTCSEEEC-CBSSSC
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc-ccc-----cchHHHHHHHHHHHHhcCCCEEEe-cCccCC
Confidence 555432 234567777778999999999999876543 111 22233355666654 459999988 489888
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 010610 422 KFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 422 ~yPveaV~~m~~I~~~aE 439 (506)
-.|.+.-+.+..+.++.-
T Consensus 177 ~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp CCHHHHHHHHHHHHHHCS
T ss_pred cCHHHHHHHHHHHHHhCC
Confidence 999998888888876654
No 96
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=81.53 E-value=17 Score=33.42 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=70.5
Q ss_pred hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH-hCCEEEEcCC---Cc----ccC
Q 010610 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-ASDGAMVARG---DL----GAE 353 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~-~sDGImIaRG---DL----gve 353 (506)
++.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+- +.+..+ -+|.+++++- .- +..
T Consensus 87 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~ 157 (227)
T 2tps_A 87 VELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAV 157 (227)
T ss_dssp HHHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCC
T ss_pred HHHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCc
Confidence 446778899999886543 2355555443 33 222222344432 222222 2899998541 11 122
Q ss_pred CCCCcHHHHHHHHHHHHHHcC-CcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 354 LPIEEVPLLQEEIIRTCRSMG-KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 354 lg~e~V~~~Qk~II~~c~~~G-kPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
.+++.+.. .++... +|++.+.. -+ ..++..+...|+|++.+..---..+.|.+.++.+.
T Consensus 158 ~~~~~l~~-------~~~~~~~~pvia~GG----------I~---~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~ 217 (227)
T 2tps_A 158 QGVSLIEA-------VRRQGISIPIVGIGG----------IT---IDNAAPVIQAGADGVSMISAISQAEDPESAARKFR 217 (227)
T ss_dssp CTTHHHHH-------HHHTTCCCCEEEESS----------CC---TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHH
T ss_pred cCHHHHHH-------HHHhCCCCCEEEEcC----------CC---HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHH
Confidence 23322222 223345 89887742 12 12466677789999998764444567878887776
Q ss_pred HHHHHH
Q 010610 433 TVSLRT 438 (506)
Q Consensus 433 ~I~~~a 438 (506)
+.++..
T Consensus 218 ~~~~~~ 223 (227)
T 2tps_A 218 EEIQTY 223 (227)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 666543
No 97
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=81.30 E-value=10 Score=38.81 Aligned_cols=113 Identities=18% Similarity=0.293 Sum_probs=61.3
Q ss_pred hHhhHhcCCcEEEEc-------cCC---CHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 282 IKFGVDNKVDFYAVS-------FVK---DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 282 I~~al~~gvD~IalS-------fV~---saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaRGD 349 (506)
.+...+.|+|++.+. |+. +.+++.++++. . +++|++| |-|++. ....++. +|+|+|++|-
T Consensus 171 a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~---~--~~pvi~ggi~t~e~---a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 171 APIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGS---L--DVPVIAGGVNDYTT---ALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHH---C--SSCEEEECCCSHHH---HHHHHTTTCSEEEESCCS
T ss_pred HHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHh---c--CCCEEECCcCCHHH---HHHHHHcCCCEEEECCCc
Confidence 344457799998764 222 23445544443 2 5677774 444433 2333333 8999998753
Q ss_pred ccc----CCCCCcHHHHHHHHHHHH----HHcC---CcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 350 LGA----ELPIEEVPLLQEEIIRTC----RSMG---KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 350 Lgv----elg~e~V~~~Qk~II~~c----~~~G---kPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
-+. ..+.. ......++.+.+ .+.+ .|||.+..+- .-.|++.++..|+|++++.
T Consensus 243 ~~~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG 306 (393)
T 2qr6_A 243 NTNSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLG 306 (393)
T ss_dssp CCHHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred ccccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 111 11222 122223333332 2245 8988765322 2358999999999999985
No 98
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=80.68 E-value=15 Score=36.07 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=76.1
Q ss_pred HhHhhHhcCCc-EEEEccC-----------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-----CCEE
Q 010610 281 DIKFGVDNKVD-FYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDGA 343 (506)
Q Consensus 281 dI~~al~~gvD-~IalSfV-----------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-----sDGI 343 (506)
..+.+.+.|+| +|-+.|- .+.+.+.++-+.+++. .+.+|++||=---..+++.++++. +|+|
T Consensus 111 ~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i 189 (311)
T 1jub_A 111 MLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYV 189 (311)
T ss_dssp HHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEE
T ss_pred HHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEE
Confidence 34556678999 9988652 2556655555555432 257899997422122344444433 6888
Q ss_pred EEcCCC---cccC-------C----------CCCcHHHHHHHHHHHHH-Hc--CCcEEEEehhhhhhhcCCCCChhhccc
Q 010610 344 MVARGD---LGAE-------L----------PIEEVPLLQEEIIRTCR-SM--GKAVIVATNMLESMIVHPTPTRAEVSD 400 (506)
Q Consensus 344 mIaRGD---Lgve-------l----------g~e~V~~~Qk~II~~c~-~~--GkPvivATqmLeSMi~~~~PtRAEv~D 400 (506)
.+.-.- +.++ + |....+... ..++..+ .. ..|+|....+- + ..|
T Consensus 190 ~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~GGI~---------~---~~d 256 (311)
T 1jub_A 190 NSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGTGGIE---------T---GQD 256 (311)
T ss_dssp EECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEESSCC---------S---HHH
T ss_pred EecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEECCCC---------C---HHH
Confidence 774210 0011 0 111123333 3444444 44 68988765322 2 346
Q ss_pred HHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhcc
Q 010610 401 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT 441 (506)
Q Consensus 401 vanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~ 441 (506)
+..++..|+|+||+..---. +-| .++.+|....+..
T Consensus 257 a~~~l~~GAd~V~vg~~~l~-~~p----~~~~~i~~~l~~~ 292 (311)
T 1jub_A 257 AFEHLLCGATMLQIGTALHK-EGP----AIFDRIIKELEEI 292 (311)
T ss_dssp HHHHHHHTCSEEEECHHHHH-HCT----HHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEchHHHh-cCc----HHHHHHHHHHHHH
Confidence 88888899999998632221 123 3455555555544
No 99
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=80.45 E-value=11 Score=35.51 Aligned_cols=133 Identities=15% Similarity=0.196 Sum_probs=74.2
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCC-CceEEE---------ecCCh--------hhhhhHHHHH
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGA-DIHVIV---------KIESA--------DSIPNLHSII 337 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~-~i~IIa---------KIEt~--------~aveNldeIl 337 (506)
+.++++.+++.|+|+|.+.- ..+++.+.++.+.+ +. .+.+-. ++++. ..++.+.++.
T Consensus 86 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 162 (252)
T 1ka9_F 86 SLEDARKLLLSGADKVSVNSAAVRRPELIRELADHF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGV 162 (252)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHH
Confidence 45788888899999998864 55666666665544 32 221111 12211 2244555565
Q ss_pred Hh-CCEEEEc-CC-CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 338 TA-SDGAMVA-RG-DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 338 ~~-sDGImIa-RG-DLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
+. +++|++- ++ | +...|+ .+ ..+-+.++..+.|++... ..-+. .|+......|+|++|.
T Consensus 163 ~~G~~~i~~~~~~~~-g~~~g~-~~----~~i~~l~~~~~ipvia~G---------GI~~~---~d~~~~~~~Gadgv~v 224 (252)
T 1ka9_F 163 ELGAGEILLTSMDRD-GTKEGY-DL----RLTRMVAEAVGVPVIASG---------GAGRM---EHFLEAFQAGAEAALA 224 (252)
T ss_dssp HHTCCEEEEEETTTT-TTCSCC-CH----HHHHHHHHHCSSCEEEES---------CCCSH---HHHHHHHHTTCSEEEE
T ss_pred HcCCCEEEEecccCC-CCcCCC-CH----HHHHHHHHHcCCCEEEeC---------CCCCH---HHHHHHHHCCCHHHHH
Confidence 55 7888875 21 2 222232 22 222223445689998764 23333 3566666679999998
Q ss_pred eccccCCC-CHHHHHHHH
Q 010610 415 SGETAHGK-FPLKAVKVM 431 (506)
Q Consensus 415 s~ETA~G~-yPveaV~~m 431 (506)
..--..++ -|.++.+.+
T Consensus 225 gsal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 225 ASVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp SHHHHTTSSCHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHH
Confidence 65444555 455555544
No 100
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=80.41 E-value=12 Score=37.07 Aligned_cols=157 Identities=11% Similarity=0.044 Sum_probs=90.8
Q ss_pred CCccCHHHh-HhhHhcCCcEEEEcc-CCC-----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEE
Q 010610 274 ITEKDWDDI-KFGVDNKVDFYAVSF-VKD-----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (506)
Q Consensus 274 ltekD~~dI-~~al~~gvD~IalSf-V~s-----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImI 345 (506)
++..++..| +...+.|++.|-+.| +.. ..|..++...+.+ ..++.+.+-+.+.+ .++.-++. .|.|+|
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~~---~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNLK---GFEAALESGVKEVAV 102 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSHH---HHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCHH---HHHHHHhCCcCEEEE
Confidence 445555555 455668999987754 322 1344444333332 24556655554433 33333433 688876
Q ss_pred c-C-CCc----ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCCh---hhcccHHH-HHHhCcceeEee
Q 010610 346 A-R-GDL----GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTR---AEVSDIAI-AVREGADAVMLS 415 (506)
Q Consensus 346 a-R-GDL----gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtR---AEv~Dvan-av~dG~D~vmLs 415 (506)
- . -|+ -..+++++.....+++++.|+++|+.|-..--+ ....+.-+| .++.+++. +...|+|.+.|.
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~---~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISC---VLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC---TTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEE---EeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 2 2 232 122566778888899999999999998421100 001111123 33444443 447899999998
Q ss_pred ccccCCCCHHHHHHHHHHHHHHH
Q 010610 416 GETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 416 ~ETA~G~yPveaV~~m~~I~~~a 438 (506)
+|.=...|.+.-+.+..|.+..
T Consensus 180 -DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 180 -DTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp -ESSSCCCHHHHHHHHHHHTTTS
T ss_pred -CCCCCcCHHHHHHHHHHHHHhC
Confidence 6666678988888888776543
No 101
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=80.18 E-value=4.6 Score=35.91 Aligned_cols=62 Identities=21% Similarity=0.199 Sum_probs=38.1
Q ss_pred eEecCCCEEEEEEecCCCCceEEEeccc-------hhhhhcCCCCEEEEeCC----eEEEEEEEE---eCCeEEEEEeeC
Q 010610 188 ITLTSGQEFTFTIQRGVGSAECVSVNYD-------DFVNDVEVGDMLLVDGG----MMSLLVKSK---TEDSVKCEVVDG 253 (506)
Q Consensus 188 i~Lk~G~~v~lt~~~~~~~~~~i~v~~~-------~l~~~v~~Gd~IliDDG----~i~l~V~~~---~~~~v~~~V~~g 253 (506)
|+.+.|..+++|.+ ..|++... -+..+|++||.|++.|| ...-+|.++ ....+.|=....
T Consensus 58 I~t~~g~~L~lTp~------H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~ 131 (145)
T 1at0_A 58 LHTDGGAVLTVTPA------HLVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTRE 131 (145)
T ss_dssp EEETTSCEEEECTT------CEEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEECCCCEEEEeCC------CEEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCc
Confidence 45566777777755 34444332 37889999999999887 334445544 334466644444
Q ss_pred cE
Q 010610 254 GE 255 (506)
Q Consensus 254 G~ 255 (506)
|.
T Consensus 132 Gt 133 (145)
T 1at0_A 132 GT 133 (145)
T ss_dssp SE
T ss_pred EE
Confidence 43
No 102
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=80.01 E-value=9.8 Score=39.47 Aligned_cols=111 Identities=14% Similarity=0.127 Sum_probs=79.5
Q ss_pred HhHhhHhcCCcEEEEccCC-----------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVSFVK-----------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~-----------saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGD 349 (506)
-++.+.+.|+|+|...--. ..+....++++.++. .+.+++-+-++..++-+. +.+|.+-||-++
T Consensus 161 ~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~---~~vd~lkIgs~~ 235 (385)
T 3nvt_A 161 VAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVAL---DYVDVIQIGARN 235 (385)
T ss_dssp HHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHT---TTCSEEEECGGG
T ss_pred HHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHH---hhCCEEEECccc
Confidence 3456677899988554211 257788888887664 478888888887776655 458999999776
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-CcceeEee
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLS 415 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-G~D~vmLs 415 (506)
+.- ..+++++.+.||||++.|.|. .|-.|+...+..+.. |.+-++|.
T Consensus 236 ~~n-----------~~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 236 MQN-----------FELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp TTC-----------HHHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred ccC-----------HHHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 632 256777889999999987652 577888888888764 66556664
No 103
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=79.60 E-value=10 Score=37.44 Aligned_cols=96 Identities=15% Similarity=0.125 Sum_probs=58.5
Q ss_pred HhHhhHhcCCcEEEEc------c-CCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS------F-VKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS------f-V~saedV~~lr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. + ....|..+-++..++..+.+++||+-+ -|.++++.....-+. +||+|+-+-.
T Consensus 28 lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 28 HVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 3467889999999763 2 223333444444455557789999987 366666666655555 8999997544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+...-+.| |.+.+.|+++-
T Consensus 108 y~~-~~~~~l~~~f~~i---a~a~~lPiilY 134 (292)
T 3daq_A 108 YNK-TNQRGLVKHFEAI---ADAVKLPVVLY 134 (292)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHHCSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 321 1222343333444 44448898876
No 104
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=78.85 E-value=7.6 Score=37.55 Aligned_cols=37 Identities=16% Similarity=0.418 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 364 k~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
..+++.|+++|.|++--. . | .+++..|...|+|.+-+
T Consensus 117 ~~vi~~~~~~gi~~ipGv---------~--T---ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPGV---------N--N---PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHHTCEEECEE---------C--S---HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEcCC---------C--C---HHHHHHHHHcCCCEEEE
Confidence 578899999999985321 0 2 23488999999999988
No 105
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=78.70 E-value=24 Score=36.18 Aligned_cols=120 Identities=18% Similarity=0.315 Sum_probs=82.7
Q ss_pred HHHhHhhHhcCCcEEEEc--------------cC----------------CCHHHHHHHHHHHHhcCCCceEEEecCChh
Q 010610 279 WDDIKFGVDNKVDFYAVS--------------FV----------------KDAQVVHELKNYLKSCGADIHVIVKIESAD 328 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalS--------------fV----------------~saedV~~lr~~l~~~~~~i~IIaKIEt~~ 328 (506)
++-++.+.+.|+|.|=.- |- -+.++.++++++.++.| +.+++-+=+.+
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~G--i~~~st~~d~~ 115 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKG--MIFISTLFSRA 115 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTT--CEEEEEECSHH
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhC--CeEEEeeCCHH
Confidence 344566778899988542 32 14467777888887654 67888776777
Q ss_pred hhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH-h
Q 010610 329 SIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-E 407 (506)
Q Consensus 329 aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~-d 407 (506)
+++-+++. -+|.+=||-+|+- .++ +++++.+.|||||+.|.|- |-.|+...+.++. .
T Consensus 116 svd~l~~~--~v~~~KI~S~~~~------n~~-----LL~~va~~gkPviLstGma---------t~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 116 AALRLQRM--DIPAYKIGSGECN------NYP-----LIKLVASFGKPIILSTGMN---------SIESIKKSVEIIREA 173 (349)
T ss_dssp HHHHHHHH--TCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTTC---------CHHHHHHHHHHHHHH
T ss_pred HHHHHHhc--CCCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCCC---------CHHHHHHHHHHHHHc
Confidence 77655542 1699999977763 333 4666777899999999763 7789988888887 4
Q ss_pred CcceeEeeccccCCCCHH
Q 010610 408 GADAVMLSGETAHGKFPL 425 (506)
Q Consensus 408 G~D~vmLs~ETA~G~yPv 425 (506)
|.+.++|- -+-.||.
T Consensus 174 G~~iiLlh---c~s~Yp~ 188 (349)
T 2wqp_A 174 GVPYALLH---CTNIYPT 188 (349)
T ss_dssp TCCEEEEE---CCCCSSC
T ss_pred CCCEEEEe---ccCCCCC
Confidence 66777763 2345765
No 106
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=78.70 E-value=3.6 Score=38.85 Aligned_cols=128 Identities=12% Similarity=0.124 Sum_probs=65.5
Q ss_pred CHHH-hHhhHhcCCcEEEE-----ccCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 278 DWDD-IKFGVDNKVDFYAV-----SFVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 278 D~~d-I~~al~~gvD~Ial-----SfV~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIaRG 348 (506)
|... .+...+.|+|+|-+ .|+..... ..++++.+.. ++++++ .|.+++ .+++.++. +|+|.+++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECch
Confidence 4433 35667899999987 35555555 4455444332 456666 477655 36666666 899999866
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhh-h-hcCC---CCChhhcccHHHHHHhCcceeEeeccccCCCC
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES-M-IVHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKF 423 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeS-M-i~~~---~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~y 423 (506)
.|.- |. .+.+..+..|..++++-....- . ++.- .++..| .+..+...|+|.+++++-+.-|.+
T Consensus 107 ~l~~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 107 ALET-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp HHHC-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC------
T ss_pred HhhC-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCccccc
Confidence 5421 12 2333344445444443221100 0 0000 002122 234566789999998866555543
No 107
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=78.65 E-value=26 Score=34.15 Aligned_cols=124 Identities=11% Similarity=0.122 Sum_probs=81.6
Q ss_pred HHhHhhHhcCCcEEEEccCC--C---------HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVK--D---------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~--s---------aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRG 348 (506)
+-++.+.+.|+|+|....-. + .+..+.+++++++. .+.+++-+-.+..++-+.+. +|.+-||.+
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIga~ 115 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKY---SDILQIGAR 115 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHH---CSEEEECGG
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhh---CCEEEECcc
Confidence 34456677899988765432 1 78888999998764 47899988888887666664 799999977
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-CcceeEe--eccccCCCCHH
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVML--SGETAHGKFPL 425 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-G~D~vmL--s~ETA~G~yPv 425 (506)
++. . ..+++++-+.||||++.|.| .+|-.|+.+.+..+.. |.+-++| .|=+..-+||.
T Consensus 116 ~~~------n-----~~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~ 176 (262)
T 1zco_A 116 NSQ------N-----FELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATR 176 (262)
T ss_dssp GTT------C-----HHHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSS
T ss_pred ccc------C-----HHHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcCh
Confidence 552 2 23445555699999997643 2467777777776654 5533443 22233336776
Q ss_pred HH
Q 010610 426 KA 427 (506)
Q Consensus 426 ea 427 (506)
+.
T Consensus 177 ~~ 178 (262)
T 1zco_A 177 FT 178 (262)
T ss_dssp SB
T ss_pred hh
Confidence 53
No 108
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=78.49 E-value=6.6 Score=38.69 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=55.2
Q ss_pred HHHhHhhHhcCCcEE--EEcc---------CCCHH-----------HHHHHHHHHHhcCCCceEEEecC-Ch---hhhhh
Q 010610 279 WDDIKFGVDNKVDFY--AVSF---------VKDAQ-----------VVHELKNYLKSCGADIHVIVKIE-SA---DSIPN 332 (506)
Q Consensus 279 ~~dI~~al~~gvD~I--alSf---------V~sae-----------dV~~lr~~l~~~~~~i~IIaKIE-t~---~aveN 332 (506)
.+.++...+.|+|+| .+|| ++++. ++-++.+.+++.+.+++++.+.- ++ -|+++
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~ 114 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDE 114 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHH
Confidence 455566667899985 5666 44333 22223333344345677777754 43 35565
Q ss_pred HHH-HHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEE
Q 010610 333 LHS-IITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 333 lde-Il~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPviv 379 (506)
+-+ ..++ +||+++. ++|+++ ..+.+..|+++|...+.
T Consensus 115 f~~~~~~aGvdgvii~------Dlp~ee----~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIA------DVPVEE----SAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp HHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEeC------CCCHhh----HHHHHHHHHHcCCeEEE
Confidence 533 3334 8999994 455554 46788999999987663
No 109
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=78.44 E-value=28 Score=34.27 Aligned_cols=128 Identities=11% Similarity=0.105 Sum_probs=77.1
Q ss_pred HHhHhhHhcCCcEEEEcc-CCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEEEcCCCccc-C
Q 010610 280 DDIKFGVDNKVDFYAVSF-VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARGDLGA-E 353 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSf-V~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGImIaRGDLgv-e 353 (506)
..+..+...|+|.|.+-- ..+.+++.++.++..+.|- .+++-+- |.+|+..+ +|.|-+..-||.. +
T Consensus 133 ~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl--~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t~~ 204 (272)
T 3tsm_A 133 YQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGM--DALIEVH------DEAEMERALKLSSRLLGVNNRNLRSFE 204 (272)
T ss_dssp HHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTC--EEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCC--eEEEEeC------CHHHHHHHHhcCCCEEEECCCCCccCC
Confidence 357788899999977653 3456778888888777654 4444443 44454433 6777777556532 2
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 354 LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 354 lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
..++... +++... ..++|++.- +.+-|.. |+..+...|+|+++...---..+.|.++++.|.
T Consensus 205 ~dl~~~~----~L~~~i-p~~~~vIae---------sGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 205 VNLAVSE----RLAKMA-PSDRLLVGE---------SGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp BCTHHHH----HHHHHS-CTTSEEEEE---------SSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred CChHHHH----HHHHhC-CCCCcEEEE---------CCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 2222211 222221 126676643 3444553 577888899999987544445677888887664
No 110
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=78.42 E-value=11 Score=37.13 Aligned_cols=121 Identities=18% Similarity=0.185 Sum_probs=71.5
Q ss_pred HHhHhhHhcCCcEE-EEc-------------cCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEE
Q 010610 280 DDIKFGVDNKVDFY-AVS-------------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAM 344 (506)
Q Consensus 280 ~dI~~al~~gvD~I-alS-------------fV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGIm 344 (506)
+.++.+.+.|+|+| .+- ..++++.+.++++. .+++++.|+=.-. ++.++...+. +|+|.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIGH-IVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTTC-HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEecccccc-hHHHHHHHHCCCCEEE
Confidence 45667788999999 442 23366667666543 2567777764311 2333333444 89996
Q ss_pred EcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCH
Q 010610 345 VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 424 (506)
Q Consensus 345 IaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yP 424 (506)
+-.+|. .+++ .+++. |+..|.++++.+. + ..+...++..|+|.|.++||+-.| -.
T Consensus 106 -~~~~l~----~~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~ 160 (305)
T 2nv1_A 106 -ESEVLT----PADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NI 160 (305)
T ss_dssp -ECTTSC----CSCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CT
T ss_pred -EeccCC----HHHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-ch
Confidence 444442 2221 12223 5567899887652 2 224566778999999999987666 33
Q ss_pred HHHHHHH
Q 010610 425 LKAVKVM 431 (506)
Q Consensus 425 veaV~~m 431 (506)
.+++...
T Consensus 161 ~~~~~h~ 167 (305)
T 2nv1_A 161 VEAVRHM 167 (305)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 4554443
No 111
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=78.37 E-value=7.8 Score=38.68 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=58.6
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++..++..+.+++||+-+= |.++++....--+. +||+|+-+-.
T Consensus 34 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 34 AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467889999998873 33344444444555555567889998763 56666666555554 8999997654
Q ss_pred cc--cCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LG--AELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lg--velg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.. .-...+.+.. ..-.-|.+.+.|+++-
T Consensus 114 y~~~~~~s~~~l~~---~f~~va~a~~lPiilY 143 (309)
T 3fkr_A 114 HGATFRVPEAQIFE---FYARVSDAIAIPIMVQ 143 (309)
T ss_dssp BTTTBCCCHHHHHH---HHHHHHHHCSSCEEEE
T ss_pred CccCCCCCHHHHHH---HHHHHHHhcCCCEEEE
Confidence 32 1222223333 3333445557887765
No 112
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=78.16 E-value=32 Score=31.20 Aligned_cols=126 Identities=9% Similarity=0.068 Sum_probs=71.4
Q ss_pred CHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~ 356 (506)
+.+.++.+.+.|+|+| ++-.-..+-+ +++++. .+.+++.+-|++-+ ..-++. +|.+-+-++++. +
T Consensus 72 ~~~~~~~a~~~Gad~i-v~~~~~~~~~----~~~~~~--g~~vi~g~~t~~e~---~~a~~~Gad~vk~~~~~~~---g- 137 (205)
T 1wa3_A 72 SVEQCRKAVESGAEFI-VSPHLDEEIS----QFCKEK--GVFYMPGVMTPTEL---VKAMKLGHTILKLFPGEVV---G- 137 (205)
T ss_dssp SHHHHHHHHHHTCSEE-ECSSCCHHHH----HHHHHH--TCEEECEECSHHHH---HHHHHTTCCEEEETTHHHH---H-
T ss_pred CHHHHHHHHHcCCCEE-EcCCCCHHHH----HHHHHc--CCcEECCcCCHHHH---HHHHHcCCCEEEEcCcccc---C-
Confidence 4456788889999999 5544444333 334333 46777765554321 122222 788776432210 1
Q ss_pred CcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCC---HHHHHHHHH
Q 010610 357 EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF---PLKAVKVMH 432 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~y---PveaV~~m~ 432 (506)
...+-+.+... +.|++....+ +. .++..+...|+|++....-... +. |.+.++.+.
T Consensus 138 ------~~~~~~l~~~~~~~pvia~GGI----------~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~ 197 (205)
T 1wa3_A 138 ------PQFVKAMKGPFPNVKFVPTGGV----------NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFV 197 (205)
T ss_dssp ------HHHHHHHHTTCTTCEEEEBSSC----------CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCCcEEEcCCC----------CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHH
Confidence 12222222334 6887765421 21 3688899999999988644333 45 777777776
Q ss_pred HHHHH
Q 010610 433 TVSLR 437 (506)
Q Consensus 433 ~I~~~ 437 (506)
+++++
T Consensus 198 ~~~~~ 202 (205)
T 1wa3_A 198 EKIRG 202 (205)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 113
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=77.81 E-value=10 Score=35.73 Aligned_cols=133 Identities=11% Similarity=0.090 Sum_probs=71.3
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCC-ceEE--Ee-------cCCh--------hhhhhHHHHH
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGAD-IHVI--VK-------IESA--------DSIPNLHSII 337 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~-i~II--aK-------IEt~--------~aveNldeIl 337 (506)
+.++++.+++.|+|+|.+.. ..+++.+.++.+.+ +.+ +.+- ++ +++. ..++.+..+.
T Consensus 85 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 161 (253)
T 1thf_D 85 DFETASELILRGADKVSINTAAVENPSLITQIAQTF---GSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 161 (253)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHc---CCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHH
Confidence 45778888899999998864 34444455554443 422 2111 11 2211 2344455555
Q ss_pred Hh-CCEEEEc-CC-CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 338 TA-SDGAMVA-RG-DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 338 ~~-sDGImIa-RG-DLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
+. +|.|++- +. | +...|+ .+. ..+++ ++..+.|++... ..-+. .|+..+...|+|++|.
T Consensus 162 ~~G~~~i~~~~~~~~-g~~~g~-~~~-~~~~l---~~~~~ipvia~G---------GI~~~---~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 162 KRGAGEILLTSIDRD-GTKSGY-DTE-MIRFV---RPLTTLPIIASG---------GAGKM---EHFLEAFLAGADAALA 223 (253)
T ss_dssp HTTCSEEEEEETTTT-TSCSCC-CHH-HHHHH---GGGCCSCEEEES---------CCCSH---HHHHHHHHTTCSEEEE
T ss_pred HCCCCEEEEEeccCC-CCCCCC-CHH-HHHHH---HHhcCCCEEEEC---------CCCCH---HHHHHHHHcCChHHHH
Confidence 55 6888874 11 2 111222 222 22222 234589998764 23333 3566666789999997
Q ss_pred eccccCCC-CHHHHHHHH
Q 010610 415 SGETAHGK-FPLKAVKVM 431 (506)
Q Consensus 415 s~ETA~G~-yPveaV~~m 431 (506)
..=--.++ -|.++++.+
T Consensus 224 Gsal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 224 ASVFHFREIDVRELKEYL 241 (253)
T ss_dssp SHHHHTTCSCHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHH
Confidence 53333344 466666655
No 114
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=77.62 E-value=8.5 Score=39.54 Aligned_cols=94 Identities=15% Similarity=0.223 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEE
Q 010610 301 AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 301 aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPviv 379 (506)
.++..+|+++.++.| +.+++-.=+.++++ .+.+. +|.+=||-+|+ ..++ +++.+.+.|||||+
T Consensus 77 ~e~~~~L~~~~~~~G--i~~~st~fD~~svd---~l~~~~v~~~KI~S~~~------~N~p-----LL~~va~~gKPviL 140 (350)
T 3g8r_A 77 PEQMQKLVAEMKANG--FKAICTPFDEESVD---LIEAHGIEIIKIASCSF------TDWP-----LLERIARSDKPVVA 140 (350)
T ss_dssp HHHHHHHHHHHHHTT--CEEEEEECSHHHHH---HHHHTTCCEEEECSSST------TCHH-----HHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHHHcC--CcEEeccCCHHHHH---HHHHcCCCEEEECcccc------cCHH-----HHHHHHhhCCcEEE
Confidence 345666666665533 44555444444443 33344 79999998776 2333 45566678999999
Q ss_pred EehhhhhhhcCCCCChhhcccHHHHHHh-CcceeEeecccc
Q 010610 380 ATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLSGETA 419 (506)
Q Consensus 380 ATqmLeSMi~~~~PtRAEv~Dvanav~d-G~D~vmLs~ETA 419 (506)
.|.|- |-.|+...++++.. |.+.++|-.++.
T Consensus 141 stGms---------tl~Ei~~Ave~i~~~g~~viLlhC~s~ 172 (350)
T 3g8r_A 141 STAGA---------RREDIDKVVSFMLHRGKDLTIMHCVAE 172 (350)
T ss_dssp ECTTC---------CHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred ECCCC---------CHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 99762 77898888888775 667666655543
No 115
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=77.58 E-value=28 Score=31.89 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCCccCHHHh----HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceE-EEecCChhhhhhHHHHHHh-CCEEEE
Q 010610 272 PSITEKDWDDI----KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIITA-SDGAMV 345 (506)
Q Consensus 272 p~ltekD~~dI----~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~I-IaKIEt~~aveNldeIl~~-sDGImI 345 (506)
|.+...|.+++ +.+.+.|+|+|-+- ..+++.++.++++.+..+.++.| ...+.+. +.++..++. +|+|.+
T Consensus 11 ~~i~~~d~~~~~~~~~~~~~~G~~~i~l~-~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 11 AILRGITPDEALAHVGAVIDAGFDAVEIP-LNSPQWEQSIPAIVDAYGDKALIGAGTVLKP---EQVDALARMGCQLIVT 86 (212)
T ss_dssp EECTTCCHHHHHHHHHHHHHHTCCEEEEE-TTSTTHHHHHHHHHHHHTTTSEEEEECCCSH---HHHHHHHHTTCCEEEC
T ss_pred EEEeCCCHHHHHHHHHHHHHCCCCEEEEe-CCChhHHHHHHHHHHhCCCCeEEEeccccCH---HHHHHHHHcCCCEEEe
Confidence 45555555543 45668899999884 34566677777666544433333 1233443 356666665 899974
Q ss_pred cCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 346 ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 346 aRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
+- .. ..+++.+++.|.++++.+ .|..| +..+...|+|.+.+
T Consensus 87 ~~---------~~-----~~~~~~~~~~g~~~~~g~-----------~t~~e---~~~a~~~G~d~v~v 127 (212)
T 2v82_A 87 PN---------IH-----SEVIRRAVGYGMTVCPGC-----------ATATE---AFTALEAGAQALKI 127 (212)
T ss_dssp SS---------CC-----HHHHHHHHHTTCEEECEE-----------CSHHH---HHHHHHTTCSEEEE
T ss_pred CC---------CC-----HHHHHHHHHcCCCEEeec-----------CCHHH---HHHHHHCCCCEEEE
Confidence 32 11 346788999999876542 13333 45678899999987
No 116
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=77.54 E-value=17 Score=35.70 Aligned_cols=149 Identities=14% Similarity=0.152 Sum_probs=91.0
Q ss_pred CCCCccCHHHh-HhhHhc--CCcEEEEccCCCHHHHHHHHHHHHhcCC-CceEEEecCChhhhhhHHHHHH--------h
Q 010610 272 PSITEKDWDDI-KFGVDN--KVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIESADSIPNLHSIIT--------A 339 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~--gvD~IalSfV~saedV~~lr~~l~~~~~-~i~IIaKIEt~~aveNldeIl~--------~ 339 (506)
|..|+.|.+.+ +.+.+. +++.|+++ +..+...++.|...+. .++|.+-|==|.|-.+.+..+. =
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 55566665544 456667 78888764 5567778888864344 6777776644444333332222 2
Q ss_pred CCEEEE--cCCCcccCCCCCcHHHHHHHHHHHHHHcCCcE--EEEehhhhhhhcCCCCChhh-cccHHH-HHHhCcceeE
Q 010610 340 SDGAMV--ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAV--IVATNMLESMIVHPTPTRAE-VSDIAI-AVREGADAVM 413 (506)
Q Consensus 340 sDGImI--aRGDLgvelg~e~V~~~Qk~II~~c~~~GkPv--ivATqmLeSMi~~~~PtRAE-v~Dvan-av~dG~D~vm 413 (506)
+|.|=+ -.|-| .+=.++.+..-.+.+.++|...|+|+ |+.|-.| +..| +..... ++..|+|.|=
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEE
Confidence 565522 11211 01113457777778888898878884 8777666 4455 333333 7788999986
Q ss_pred eeccccCCCC----HHHHHHHHHHHHHHH
Q 010610 414 LSGETAHGKF----PLKAVKVMHTVSLRT 438 (506)
Q Consensus 414 Ls~ETA~G~y----PveaV~~m~~I~~~a 438 (506)
-| .|.. -++.|+.|++.+++.
T Consensus 169 TS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 169 TS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred eC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 55 4544 469999999988765
No 117
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=77.02 E-value=10 Score=37.23 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=71.8
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEc--C-CCcccCCCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVA--R-GDLGAELPI 356 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIa--R-GDLgvelg~ 356 (506)
+-++.+.+.|+|++.++-.-- ++..++++++++.|-+...++-=.| ..+.+..|++.++|++-. + |=-|..-
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~~gl~~i~liaP~t--~~eri~~i~~~~~gfvY~vS~~GvTG~~~-- 188 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVPV-EESAPFSKAAKAHGIAPIFIAPPNA--DADTLKMVSEQGEGYTYLLSRAGVTGTES-- 188 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEECEECTTC--CHHHHHHHHHHCCSCEEESCCCCCC------
T ss_pred HHHHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHhCCCcEEEEecCCCCCCcc--
Confidence 456677889999999986553 6688888888887765332332222 357899999998755432 1 2122221
Q ss_pred CcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 357 EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.++.-....++..+++ ..|+++-.. .=|. .++..++..|+|+++.-
T Consensus 189 -~~~~~~~~~v~~vr~~~~~pv~vGfG---------I~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 189 -KAGEPIENILTQLAEFNAPPPLLGFG---------IAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -----CHHHHHHHHHTTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred -CCcHHHHHHHHHHHHhcCCCEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 1333344555665554 679887542 2222 23556889999999974
No 118
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=76.99 E-value=13 Score=36.70 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=72.4
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEE--cC-CCcccCCCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV--AR-GDLGAELPI 356 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImI--aR-GDLgvelg~ 356 (506)
+-++.+.+.|+|++.++=.-- ++..++++++++.|-+...++--.| ..+.+.+|.+.++|++- .+ |==|..-
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~I~lvap~t--~~eri~~i~~~~~gfiY~vs~~GvTG~~~-- 190 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQPIFIAPPTA--SDETLRAVAQLGKGYTYLLSRAGVTGAET-- 190 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEEEEECTTC--CHHHHHHHHHHCCSCEEECCCC---------
T ss_pred HHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHHCCCeEEEEeccCCCCccc--
Confidence 456677899999999986654 5578888888887765322222222 35788999988766542 22 1111111
Q ss_pred CcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 357 EEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.++.-....++..+++ ..|+++.. ..=|. .++..++..|+|+++.-
T Consensus 191 -~~~~~~~~~v~~vr~~~~~Pv~vGf---------GIst~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 191 -KANMPVHALLERLQQFDAPPALLGF---------GISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp --CCHHHHHHHHHHHHTTCCCEEECS---------SCCSH---HHHHHHHHTTCSEEEES
T ss_pred -CCchhHHHHHHHHHHhcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 2233345666666665 57998854 22233 24666889999999974
No 119
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=76.35 E-value=15 Score=36.21 Aligned_cols=98 Identities=7% Similarity=0.087 Sum_probs=60.0
Q ss_pred HHhHhhHhcCCcEEEE------ccCCCHHHHHHH-HHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHEL-KNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~Ial------SfV~saedV~~l-r~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+ ++.-|.++=.++ +...+..+.+++||+-+= |.++++.....-+. +||+|+.+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3456788999999986 244444444444 444555566788998874 46777766666555 899999765
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHc---CCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSM---GKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~---GkPvivA 380 (506)
.+.-..+.+.+...-+ .-|.+. +.|+++.
T Consensus 108 ~y~~~~s~~~l~~~f~---~va~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVSDDGLFAWFS---AVFSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCCHHHHHHHHH---HHHHHHCTTCCCEEEE
T ss_pred cCCCCCCHHHHHHHHH---HHHHhcCCCCCcEEEE
Confidence 4422112223333333 445556 7898875
No 120
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=76.32 E-value=7.8 Score=41.29 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=43.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 108 r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
.+-.+-+.+|...+..+.++.|+++|+++.=||++||..+.+.++++.+|+
T Consensus 218 grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~ 268 (496)
T 4fxs_A 218 GRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 268 (496)
T ss_dssp SCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH
Confidence 355677888988889999999999999999999999988777777776664
No 121
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=75.83 E-value=10 Score=37.42 Aligned_cols=157 Identities=13% Similarity=0.102 Sum_probs=90.7
Q ss_pred CCccCHHHh-HhhHhcCCcEEEEcc-CCC-----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEE
Q 010610 274 ITEKDWDDI-KFGVDNKVDFYAVSF-VKD-----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (506)
Q Consensus 274 ltekD~~dI-~~al~~gvD~IalSf-V~s-----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImI 345 (506)
++..++..| +...+.|+|.|=+.| +.. ..|..++...+.+. .++.+.+-+.+.+ .++..++. .|.|.|
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~---~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLK---GFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHH---HHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHH---hHHHHHHCCCCEEEE
Confidence 455555554 455678999987754 322 13555555555432 2333333333433 34444444 575544
Q ss_pred --cCCCcc----cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCC---CCChhhcccHHH-HHHhCcceeEee
Q 010610 346 --ARGDLG----AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHP---TPTRAEVSDIAI-AVREGADAVMLS 415 (506)
Q Consensus 346 --aRGDLg----velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~---~PtRAEv~Dvan-av~dG~D~vmLs 415 (506)
+-.|.- .....++.....+++++.|+++|++|-+..-+- ...+ +-+..++.+++. +...|+|.+.|.
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCA---LGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETT---TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE---eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 322220 122345566677889999999999986532110 1112 112334555554 466799999996
Q ss_pred ccccCCCCHHHHHHHHHHHHHHH
Q 010610 416 GETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 416 ~ETA~G~yPveaV~~m~~I~~~a 438 (506)
+|.=.-.|.+.-+.+..+.+..
T Consensus 177 -DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 177 -DTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp -ETTSCCCHHHHHHHHHHHHHHS
T ss_pred -CCCCCcCHHHHHHHHHHHHHhC
Confidence 7777788999999888887665
No 122
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=75.15 E-value=12 Score=37.52 Aligned_cols=96 Identities=8% Similarity=0.117 Sum_probs=58.8
Q ss_pred HhHhhHhcCCcEEEEc------cCCCHHH-HHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS------FVKDAQV-VHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS------fV~saed-V~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. +--|.++ .+-++..++..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 49 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 49 LVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPY 128 (314)
T ss_dssp HHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467789999999873 2233333 3344444555667889999764 56677666666555 8999987543
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+.. ..-..|.+.+.|+++-
T Consensus 129 y~~-~s~~~l~~---~f~~va~a~~lPiilY 155 (314)
T 3qze_A 129 YNK-PTQEGMYQ---HFRHIAEAVAIPQILY 155 (314)
T ss_dssp SSC-CCHHHHHH---HHHHHHHHSCSCEEEE
T ss_pred CCC-CCHHHHHH---HHHHHHHhcCCCEEEE
Confidence 321 11223333 3334455568998876
No 123
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=74.81 E-value=14 Score=36.75 Aligned_cols=97 Identities=7% Similarity=0.024 Sum_probs=58.1
Q ss_pred HhHhhHhcCCcEEEEc------c-CCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhhHHHHHHh-CCEEEEcC-C
Q 010610 281 DIKFGVDNKVDFYAVS------F-VKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVAR-G 348 (506)
Q Consensus 281 dI~~al~~gvD~IalS------f-V~saedV~~lr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDGImIaR-G 348 (506)
.++|.++.|+|+|.+. + ....|..+-++...+..+.+++||+-+ -|.++++.....-+. +|++|+-+ .
T Consensus 40 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 119 (307)
T 3s5o_A 40 NLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPC 119 (307)
T ss_dssp HHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467889999999763 2 333444444444555567788999976 455666665555555 89999853 3
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
........+.+...-+.| |.+.+.|+++.
T Consensus 120 y~~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 120 YYRGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp TTGGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred cCCCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 322112223333333333 55568888875
No 124
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=74.00 E-value=22 Score=35.27 Aligned_cols=96 Identities=18% Similarity=0.122 Sum_probs=59.2
Q ss_pred HhHhhHhcCCcEEEEc------cCCCHHH-HHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS------FVKDAQV-VHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS------fV~saed-V~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. +.-|.++ .+-++...+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 37 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 37 LVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPF 116 (303)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCC
Confidence 3467889999999862 3344444 4444444555567899999875 46777766666555 8999986544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcC-CcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMG-KAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~G-kPvivA 380 (506)
+.- .+.+.+...-+.| |.+.+ .|+++.
T Consensus 117 y~~-~s~~~l~~~f~~v---a~a~~~lPiilY 144 (303)
T 2wkj_A 117 YYP-FSFEEHCDHYRAI---IDSADGLPMVVY 144 (303)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHHTTCCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCCEEEE
Confidence 311 1223344444444 44456 898875
No 125
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=73.95 E-value=10 Score=37.76 Aligned_cols=96 Identities=20% Similarity=0.202 Sum_probs=58.4
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++..++..+.+++||+-+ -|.++++.....-+. +|++|+-+-.
T Consensus 41 lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 41 LANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 3467889999998763 2233344444444455567789999987 345666665555555 8999987543
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- + .-..+.+..-..|.+.+.|+++.
T Consensus 121 y~~--~--s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 121 YSK--P--PQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp SSC--C--CHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCC--C--CHHHHHHHHHHHHHhcCCCEEEE
Confidence 321 1 22233334444455668998876
No 126
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=73.94 E-value=26 Score=34.49 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=59.3
Q ss_pred HHhHhhHh-cCCcEEEEc------cCCCHH-HHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcC
Q 010610 280 DDIKFGVD-NKVDFYAVS------FVKDAQ-VVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 280 ~dI~~al~-~gvD~IalS------fV~sae-dV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaR 347 (506)
+.++|.++ .|+|+|.+. +--|.+ ..+-++...+..+.+++||+-+=+ .++++.....-+. +|++|+-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 34567889 999999862 334444 444444455556678999998744 6777666665555 89999875
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
-.+-- ...+.+...-+ .-|.+.+.|+++.
T Consensus 108 P~y~~-~~~~~l~~~f~---~va~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK-FSFPEIKHYYD---TIIAETGSNMIVY 136 (293)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHHCCCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 43311 11223333333 3455567899875
No 127
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=73.91 E-value=31 Score=33.26 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=85.2
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHH-------HHHH-hCCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLH-------SIIT-ASDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNld-------eIl~-~sDG 342 (506)
|.-|..|.+.+ +.+.++|++.|+++ +..+ ..++++.... .+++.+-|==|.|-.+.+ +-++ =+|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 55566665544 57788999999875 4556 6666665431 355665553333322222 2122 2676
Q ss_pred EEE--cCCCcccCCCCCcHHHHHHHHHHHHHHcCCcE--EEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeecc
Q 010610 343 AMV--ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAV--IVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGE 417 (506)
Q Consensus 343 ImI--aRGDLgvelg~e~V~~~Qk~II~~c~~~GkPv--ivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~E 417 (506)
|=+ -.|.|- . .+..-.+.+.++|...|+|+ |+-|-.| +..|+...+. +...|+|.|=-|
T Consensus 105 ID~vinig~~~---~--~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP---E--AVYREVSGIVKLAKSYGAVVKVILEAPLW---------DDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH---H--HHHHHHHHHHHHHHHTTCEEEEECCGGGS---------CHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH---H--HHHHHHHHHHHHHhhcCCeEEEEEeccCC---------CHHHHHHHHHHHHHhCCCEEEeC--
Confidence 533 223221 1 56666678888999989997 6655433 5556555555 667899987654
Q ss_pred ccCCCCH-----HHHHHH--HHHHHH
Q 010610 418 TAHGKFP-----LKAVKV--MHTVSL 436 (506)
Q Consensus 418 TA~G~yP-----veaV~~--m~~I~~ 436 (506)
.|..| ++.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 66665 788999 887764
No 128
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=73.85 E-value=23 Score=32.73 Aligned_cols=134 Identities=17% Similarity=0.163 Sum_probs=68.6
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCC-ce-----------EEEecCC------hhhhhhHHHHH
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGAD-IH-----------VIVKIES------ADSIPNLHSII 337 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~-i~-----------IIaKIEt------~~aveNldeIl 337 (506)
+.++++.+++.|+|+|.+.. ..+++.+.+ +.+..+.+ +. +.+++.. ...++.+..+.
T Consensus 88 ~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~---~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~ 164 (253)
T 1h5y_A 88 SLEDATTLFRAGADKVSVNTAAVRNPQLVAL---LAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVE 164 (253)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHCTHHHHH---HHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHhhCcHHHHH---HHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHH
Confidence 45667778889999999763 334443433 33333432 21 1223221 12344455555
Q ss_pred Hh-CCEEEEcCCCcc-cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 338 TA-SDGAMVARGDLG-AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 338 ~~-sDGImIaRGDLg-velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
+. +|.|.+..-+.. ...++ .+ ...+++. +..+.|++.... .-+ ..|+..+...|+|++|+.
T Consensus 165 ~~G~d~i~~~~~~~~g~~~~~-~~-~~i~~l~---~~~~~pvia~GG---------i~~---~~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 165 ELGAGEILLTSIDRDGTGLGY-DV-ELIRRVA---DSVRIPVIASGG---------AGR---VEHFYEAAAAGADAVLAA 227 (253)
T ss_dssp HHTCSEEEEEETTTTTTCSCC-CH-HHHHHHH---HHCSSCEEEESC---------CCS---HHHHHHHHHTTCSEEEES
T ss_pred hCCCCEEEEecccCCCCcCcC-CH-HHHHHHH---HhcCCCEEEeCC---------CCC---HHHHHHHHHcCCcHHHHH
Confidence 55 899887532221 11121 11 1122222 335789887642 222 245677777899999986
Q ss_pred ccccCCCC-HHHHHHHH
Q 010610 416 GETAHGKF-PLKAVKVM 431 (506)
Q Consensus 416 ~ETA~G~y-PveaV~~m 431 (506)
.---.+.. +.+..++|
T Consensus 228 sal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 228 SLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp HHHHTTSSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 43333333 34444444
No 129
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=73.64 E-value=14 Score=36.60 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=58.3
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCC-CceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGA-DIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~-~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRG 348 (506)
.++|.++.|+|+|.+. .....|..+-++...+..+. +++||+-+= |.++++.....-+. +|++|+-+-
T Consensus 33 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 33 LIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp HHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3467889999999873 33333444444445555667 799999764 56666665555555 899998754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- ... ..+.+..-..|.+.+.|+++.
T Consensus 113 ~y~~-~s~---~~l~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 113 YYNK-PTQ---QGLYEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhCCCCEEEE
Confidence 4321 111 233333444455568888865
No 130
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=73.37 E-value=22 Score=34.91 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=72.2
Q ss_pred CHHHhHhh-HhcCCcEEEEc-----cCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhh---HHHHHHh-CCEEEEcC
Q 010610 278 DWDDIKFG-VDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPN---LHSIITA-SDGAMVAR 347 (506)
Q Consensus 278 D~~dI~~a-l~~gvD~IalS-----fV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveN---ldeIl~~-sDGImIaR 347 (506)
|...+..+ .+.|+++|.+- |=.+.+++.++++.. +++|+.| +-+-+ +++-.+. +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 55556544 45799999773 233567888887653 5677766 23322 3444433 89999976
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeecc
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGE 417 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~E 417 (506)
.||. +.-.++++..|+..|..+++.++ |..| +..+...|+|.+-.++-
T Consensus 144 a~l~--------~~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~r 191 (272)
T 3qja_A 144 AALE--------QSVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNAR 191 (272)
T ss_dssp GGSC--------HHHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEESB
T ss_pred ccCC--------HHHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECCC
Confidence 6664 23456788999999999987652 2333 45666789999998853
No 131
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=72.26 E-value=39 Score=33.54 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=90.5
Q ss_pred CCCCCccCHHHhHhhHhcCCcEEEEccC-------------CCHHHHHHHHHHHHhcCCCceEEEecCC------hhhhh
Q 010610 271 LPSITEKDWDDIKFGVDNKVDFYAVSFV-------------KDAQVVHELKNYLKSCGADIHVIVKIES------ADSIP 331 (506)
Q Consensus 271 lp~ltekD~~dI~~al~~gvD~IalSfV-------------~saedV~~lr~~l~~~~~~i~IIaKIEt------~~ave 331 (506)
+.-+|-+|.---+.+-+.|+|.|.+..- -+.+++..--+.+.+.-++.+|++=+|+ .++++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 4455788988888888899999987621 1223333322333344456899999998 36678
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEeh----hhhhh---hcCCC-CChhh--ccc
Q 010610 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATN----MLESM---IVHPT-PTRAE--VSD 400 (506)
Q Consensus 332 NldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATq----mLeSM---i~~~~-PtRAE--v~D 400 (506)
|.-.++++ ++||-+-=|. .+-..|++..++|+||+-... -...+ .-..+ ..+++ +.|
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~r 178 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRD 178 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHH
Confidence 88888876 8899886441 234556666789999985421 11111 11122 12222 555
Q ss_pred HHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 401 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 401 vanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
.--....|+|+++|=+ - |.+ .+..|+++..
T Consensus 179 A~a~~eAGA~~ivlE~-----v-p~~---~a~~It~~l~ 208 (275)
T 3vav_A 179 ARAVEEAGAQLIVLEA-----V-PTL---VAAEVTRELS 208 (275)
T ss_dssp HHHHHHHTCSEEEEES-----C-CHH---HHHHHHHHCS
T ss_pred HHHHHHcCCCEEEecC-----C-CHH---HHHHHHHhCC
Confidence 6667788999999942 1 333 4566666554
No 132
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=72.04 E-value=21 Score=35.63 Aligned_cols=158 Identities=9% Similarity=0.067 Sum_probs=92.3
Q ss_pred CCCccCHHHhH-hhHhcCCcEEEEcc-CCC-----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEE
Q 010610 273 SITEKDWDDIK-FGVDNKVDFYAVSF-VKD-----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAM 344 (506)
Q Consensus 273 ~ltekD~~dI~-~al~~gvD~IalSf-V~s-----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGIm 344 (506)
.++..|+..|. ...+.|+|.|=+.| +.. ..|..++...+.+. .++.+.+-+.+..+ ++..++. .|.|.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRG---LENALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHH---HHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHh---HHHHHhCCcCEEE
Confidence 34556666654 44568999997754 322 13444444444332 45555555544443 4444443 67544
Q ss_pred --EcCCCc----ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCC---CChhhcccHHH-HHHhCcceeEe
Q 010610 345 --VARGDL----GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPT---PTRAEVSDIAI-AVREGADAVML 414 (506)
Q Consensus 345 --IaRGDL----gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~---PtRAEv~Dvan-av~dG~D~vmL 414 (506)
++-.|+ -.....++.....+++++.++++|+.|-..--+ ....+. -+..++.+++. +...|+|.+.|
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 176 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLST---VFGCPYEKDVPIEQVIRLSEALFEFGISELSL 176 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC---TTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---EecCCcCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 333332 122334566777789999999999998532100 011121 23344555554 46789999999
Q ss_pred eccccCCCCHHHHHHHHHHHHHHH
Q 010610 415 SGETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 415 s~ETA~G~yPveaV~~m~~I~~~a 438 (506)
. +|.=.-.|.+.-+.+..+.+..
T Consensus 177 ~-DT~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 177 G-DTIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp E-CSSCCCCHHHHHHHHHHHHTTS
T ss_pred c-CCCCCcCHHHHHHHHHHHHHhC
Confidence 6 8888889999888888776543
No 133
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=72.02 E-value=15 Score=33.69 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=45.0
Q ss_pred EecCCCEEEEEEecC--C---CCceEEEeccchhhh--hcCCCCEEEEe--CCeEEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQRG--V---GSAECVSVNYDDFVN--DVEVGDMLLVD--GGMMSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~~--~---~~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~i~l~V~~~~~~~v~~ 248 (506)
-++.|++++|+.... + +.+....++...|.. .+++|+.+.+. +|.+..+|++++++.|+.
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~v 119 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVV 119 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEE
Confidence 478999999988732 2 334466677777765 68999999997 677777899998887653
No 134
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=71.98 E-value=31 Score=31.85 Aligned_cols=127 Identities=18% Similarity=0.156 Sum_probs=71.0
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhh----hhhHHHHHHh-----CCEEEEcCCCc
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS----IPNLHSIITA-----SDGAMVARGDL 350 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~a----veNldeIl~~-----sDGImIaRGDL 350 (506)
..++...+.|+|+|.+..--..+-++.++ +.+ .+.+.+..-+... .+.++.++.. .||+-+.+.
T Consensus 69 ~~v~~~~~~Gad~vtvh~~~g~~~i~~~~----~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-- 141 (208)
T 2czd_A 69 LIARKVFGAGADYVIVHTFVGRDSVMAVK----ELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-- 141 (208)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHHHHHHH----TTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS--
T ss_pred HHHHHHHhcCCCEEEEeccCCHHHHHHHH----HhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC--
Confidence 45666778999999887766655444443 233 4555555433222 3445555543 567654421
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHcC-CcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHH
Q 010610 351 GAELPIEEVPLLQEEIIRTCRSMG-KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 429 (506)
Q Consensus 351 gvelg~e~V~~~Qk~II~~c~~~G-kPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~ 429 (506)
.++++ +++-+.+ + .++++.. -.. .+-.++..++..|+|.+....--...+-|.++++
T Consensus 142 ----~~~~i----~~lr~~~---~~~~~iv~g----------GI~-~~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~ 199 (208)
T 2czd_A 142 ----RPERI----GYIRDRL---KEGIKILAP----------GIG-AQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAK 199 (208)
T ss_dssp ----STHHH----HHHHHHS---CTTCEEEEC----------CCC-SSTTHHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ----ChHHH----HHHHHhC---CCCeEEEEC----------CCC-CCCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHH
Confidence 12233 2232222 4 3555432 221 2223577888899999997544434456989888
Q ss_pred HHHHHH
Q 010610 430 VMHTVS 435 (506)
Q Consensus 430 ~m~~I~ 435 (506)
.+++.+
T Consensus 200 ~l~~~i 205 (208)
T 2czd_A 200 AIYDEI 205 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 135
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=71.95 E-value=42 Score=31.82 Aligned_cols=144 Identities=11% Similarity=0.022 Sum_probs=83.7
Q ss_pred HHhHhhHhcCCcEEEEccCC----------CHHHHHHHHHHHHhcCCCceEEEe-------cCC------hhhhhhHHHH
Q 010610 280 DDIKFGVDNKVDFYAVSFVK----------DAQVVHELKNYLKSCGADIHVIVK-------IES------ADSIPNLHSI 336 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~----------saedV~~lr~~l~~~~~~i~IIaK-------IEt------~~aveNldeI 336 (506)
+.++++.+.|+|+|-+.+-. +.+++.++++.+++.|-.+..+.- +-+ .++++.+...
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 113 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA 113 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 45678889999999987654 467899999999988776543321 111 1245556665
Q ss_pred HHh-----CCEEEEcCCCcccCCC----CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh
Q 010610 337 ITA-----SDGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE 407 (506)
Q Consensus 337 l~~-----sDGImIaRGDLgvelg----~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d 407 (506)
++. ++.|.+..++-..+.. ++.+...-+++...|.+.|..+.+=+ +-.+...|..++.++...+
T Consensus 114 i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn-----~~~~~~~~~~~~~~l~~~v-- 186 (295)
T 3cqj_A 114 IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEI-----MDYPLMNSISKALGYAHYL-- 186 (295)
T ss_dssp HHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEEC-----CSSGGGCSHHHHHHHHHHH--
T ss_pred HHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEee-----CCCcccCCHHHHHHHHHhc--
Confidence 554 5677775443211111 12355556778888889998766533 2222233445544454444
Q ss_pred CcceeEeeccc----cCCCCHHHHHHH
Q 010610 408 GADAVMLSGET----AHGKFPLKAVKV 430 (506)
Q Consensus 408 G~D~vmLs~ET----A~G~yPveaV~~ 430 (506)
|.+.+-+.-+| ..|.-|.+.++.
T Consensus 187 ~~~~vg~~~D~~h~~~~g~d~~~~l~~ 213 (295)
T 3cqj_A 187 NNPWFQLYPDIGNLSAWDNDVQMELQA 213 (295)
T ss_dssp CCTTEEEECBHHHHHSSSCCHHHHHHH
T ss_pred CCCCeEEEeccchHhhcCCCHHHHHHH
Confidence 33444454454 235567665553
No 136
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=71.85 E-value=20 Score=34.71 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=67.9
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEc--C-CCcccCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVA--R-GDLGAELP 355 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIa--R-GDLgvelg 355 (506)
.+.++.+.+.|+|++.++-+. .+++.++.+.++++|-+ ++.-+.-....+.+.+|.+.++|+... . |=-|..-+
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~ 188 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREK 188 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC-------
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCC
Confidence 355677788999999998654 47788888888887754 222233224456888998887654321 1 11122211
Q ss_pred CCcHH-HHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 356 IEEVP-LLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 356 ~e~V~-~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.+ .-....++..+++ +.|+.+... .=|. .++.. +..|+|+++..
T Consensus 189 ---~~~~~~~~~v~~vr~~~~~pv~vG~G---------I~t~---e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 189 ---LPYERIKKKVEEYRELCDKPVVVGFG---------VSKK---EHARE-IGSFADGVVVG 234 (262)
T ss_dssp -----CHHHHHHHHHHHHHCCSCEEEESS---------CCSH---HHHHH-HHTTSSEEEEC
T ss_pred ---cCcccHHHHHHHHHhhcCCCEEEeCC---------CCCH---HHHHH-HHcCCCEEEEC
Confidence 11 1223444444443 789887642 2222 23444 78899999874
No 137
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=71.62 E-value=20 Score=35.20 Aligned_cols=96 Identities=11% Similarity=0.095 Sum_probs=58.3
Q ss_pred HhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. +.-|. |..+-++...+..+.+++||+-+=+ .++++....--+. +||+|+-+-.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 105 (289)
T 2yxg_A 26 NINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPY 105 (289)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 3467789999998762 33344 4444444445555668999998754 6677666665555 8999987544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- .+.+.+.. ..-.-|.+.+.|+++.
T Consensus 106 y~~-~s~~~l~~---~f~~ia~a~~lPiilY 132 (289)
T 2yxg_A 106 YNK-PTQEGLRK---HFGKVAESINLPIVLY 132 (289)
T ss_dssp SSC-CCHHHHHH---HHHHHHHHCSSCEEEE
T ss_pred CCC-CCHHHHHH---HHHHHHHhcCCCEEEE
Confidence 321 12223333 3334455668898875
No 138
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=71.26 E-value=41 Score=32.07 Aligned_cols=92 Identities=11% Similarity=0.097 Sum_probs=51.5
Q ss_pred CHHHhHhhHhcCCcEEEE--ccCC--------------------CHHHHHHHHHHHHhcCCCceEEEec-CChhhhhhHH
Q 010610 278 DWDDIKFGVDNKVDFYAV--SFVK--------------------DAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLH 334 (506)
Q Consensus 278 D~~dI~~al~~gvD~Ial--SfV~--------------------saedV~~lr~~l~~~~~~i~IIaKI-Et~~aveNld 334 (506)
-.+.++...+.|+|+|-+ ||-. +.++..++.+.+++. .+++++.+. .++.-...++
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~~ 112 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSLA 112 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCTH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHH
Confidence 345566777899999876 4421 233333333333332 356676653 2221111233
Q ss_pred HHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 335 SIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 335 eIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
...++ +||+++. |+.. ++ -.+++..|+++|.+.++.
T Consensus 113 ~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~~ 149 (262)
T 1rd5_A 113 KMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVLL 149 (262)
T ss_dssp HHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECEE
T ss_pred HHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEEE
Confidence 34444 8999983 5544 33 456778899999987654
No 139
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=71.17 E-value=12 Score=37.85 Aligned_cols=96 Identities=14% Similarity=0.030 Sum_probs=58.4
Q ss_pred HhHhhHhcCCcEEEEc------cCCCHH-HHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS------FVKDAQ-VVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS------fV~sae-dV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. +.-|.+ ..+-++...+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 57 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 136 (343)
T 2v9d_A 57 LIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPY 136 (343)
T ss_dssp HHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 3467889999999862 333444 44444444555567889999875 46777766666555 8999987544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+...-+ ..|.+.+.|+++.
T Consensus 137 Y~~-~s~~~l~~~f~---~VA~a~~lPiilY 163 (343)
T 2v9d_A 137 YWK-VSEANLIRYFE---QVADSVTLPVMLY 163 (343)
T ss_dssp SSC-CCHHHHHHHHH---HHHHTCSSCEEEE
T ss_pred CCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 311 12122333333 3455667888875
No 140
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=71.00 E-value=2.5 Score=40.83 Aligned_cols=141 Identities=14% Similarity=0.058 Sum_probs=86.2
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhh-------HHHHHHh-CCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPN-------LHSIITA-SDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveN-------ldeIl~~-sDG 342 (506)
|..|+.|.+.+ +.+.++|++.|+++ +..+...+++|+ + ++|.+-|==|.|-.+ .++ ++. +|.
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdE 82 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSR-LAEVADE 82 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCE
Confidence 55677775554 57888999999875 445556666553 2 666666644333322 233 332 554
Q ss_pred EEEcCCCcccCCC------CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEee
Q 010610 343 AMVARGDLGAELP------IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (506)
Q Consensus 343 ImIaRGDLgvelg------~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs 415 (506)
|-+ -+.+| ++.+..-.+.+.++|...+.+||+.|-.| |..|+...+. ++..|+|.|=-|
T Consensus 83 ID~-----Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTS 148 (226)
T 1vcv_A 83 IDV-----VAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSS 148 (226)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEE-----ecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeC
Confidence 422 12222 23455555666677766677889877655 5566655555 667899998655
Q ss_pred ccccCCCC--------------HHHHHHHHHHHHHHHh
Q 010610 416 GETAHGKF--------------PLKAVKVMHTVSLRTE 439 (506)
Q Consensus 416 ~ETA~G~y--------------PveaV~~m~~I~~~aE 439 (506)
.|.. -++.|+.|++.++.+.
T Consensus 149 ----TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 149 ----TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp ----CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred ----CCCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 3433 3678999998877654
No 141
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=70.90 E-value=50 Score=32.35 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=58.6
Q ss_pred HHhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. +.-|. |..+-++...+..+.+++||+-+=+ .++++....--+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34567889999999862 33344 4444444455555678899998744 6677666665554 899998754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- .. -..+.+..-.-|.+.+.|+++.
T Consensus 105 ~y~~-~s---~~~l~~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK-PT---QRGLYEHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp CSSC-CC---HHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC-CC---HHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 11 1223333334455668888875
No 142
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=70.82 E-value=17 Score=36.25 Aligned_cols=97 Identities=14% Similarity=0.095 Sum_probs=54.2
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC--ChhhhhhHHHHHHh-CCEEEEcCCCc
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE--SADSIPNLHSIITA-SDGAMVARGDL 350 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE--t~~aveNldeIl~~-sDGImIaRGDL 350 (506)
.++|.++.|+|+|.+. .....|..+-++..++..+.+++||+-+= |.++++.....-+. +|++|+-+-..
T Consensus 38 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 38 TVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 3467889999998753 22233333444444555567889999873 33334333333333 79999864332
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 351 gvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
. ....+.+...-+.| |.+.+.|+++.-
T Consensus 118 ~-~~s~~~l~~~f~~v---a~a~~lPiilYn 144 (316)
T 3e96_A 118 P-YVTAGGVYAYFRDI---IEALDFPSLVYF 144 (316)
T ss_dssp S-CCCHHHHHHHHHHH---HHHHTSCEEEEE
T ss_pred C-CCCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 1 11222343333444 444578988764
No 143
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=70.72 E-value=44 Score=33.57 Aligned_cols=97 Identities=10% Similarity=0.046 Sum_probs=59.1
Q ss_pred HHhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. .....|..+-++...+..+.+++||+-+= |.++++....--+. +||+|+.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33467889999999763 33334444444445555667899999864 46777766665555 899999754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- ...+.+...-+ ..|.+.+.|+++.
T Consensus 139 ~Y~~-~s~~~l~~~f~---~VA~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP-LTQEEAYHHFA---AVAGATALPLAIY 166 (332)
T ss_dssp CSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4321 12223333333 3455567888875
No 144
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=70.23 E-value=26 Score=34.65 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=59.3
Q ss_pred HHhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|++. +.-|. |..+-++...+..+.+++||+-+=+ .++++....--+. +||+|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33467889999999863 33344 4444444455555678999998754 6677766665555 899998754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- ...+.+. +..-.-|.+.+.|+++-
T Consensus 121 ~y~~-~~~~~l~---~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK-PSQEGLL---AHFGAIAAATEVPICLY 148 (304)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 3311 1112233 33334455668999875
No 145
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=70.02 E-value=11 Score=36.03 Aligned_cols=132 Identities=12% Similarity=0.055 Sum_probs=73.6
Q ss_pred HhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHH----HHHHh-----CCEEEEcCCCcc
Q 010610 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLH----SIITA-----SDGAMVARGDLG 351 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNld----eIl~~-----sDGImIaRGDLg 351 (506)
.++...+.|+|+|.+.-.-..+.++.+.+.+++.|..+.+++..-++.+.+.++ .++.. .||+.++
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~----- 157 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGP----- 157 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECC-----
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEEC-----
Confidence 445556789999998655556668888888887777666777777776543333 22222 4676543
Q ss_pred cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHH
Q 010610 352 AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (506)
Q Consensus 352 velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m 431 (506)
..+ +..-+.|-+. .|....+-|.=. +++-.+. .++..|+|.++...-....+.|.++++.+
T Consensus 158 ----at~-~~e~~~ir~~---~~~~~~iv~PGI----------~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~ 218 (228)
T 3m47_A 158 ----STR-PERLSRLREI---IGQDSFLISPGV----------GAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGA 218 (228)
T ss_dssp ----SSC-HHHHHHHHHH---HCSSSEEEECC--------------------CGGGTCSEEEECHHHHTSSCHHHHHHHH
T ss_pred ----CCC-hHHHHHHHHh---cCCCCEEEecCc----------CcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHH
Confidence 211 1111222222 233122222110 2333355 77889999988866555667899888877
Q ss_pred HHHHH
Q 010610 432 HTVSL 436 (506)
Q Consensus 432 ~~I~~ 436 (506)
.+.++
T Consensus 219 ~~~~~ 223 (228)
T 3m47_A 219 IESIK 223 (228)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 66543
No 146
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=70.02 E-value=35 Score=33.08 Aligned_cols=139 Identities=22% Similarity=0.284 Sum_probs=81.7
Q ss_pred CCCCccCH----HHhHhhHhcCCcEEEE-----ccCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH
Q 010610 272 PSITEKDW----DDIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (506)
Q Consensus 272 p~ltekD~----~dI~~al~~gvD~Ial-----SfV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~ 338 (506)
|++=.-|. ++++...+.|+|++-+ .||.+ +.-++++|+... +..+-+=.+|++++.. ++...+
T Consensus 32 pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~--i~~~~~ 107 (246)
T 3inp_A 32 PSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI--TAGMDVHLMVKPVDAL--IESFAK 107 (246)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC--CSCEEEEEECSSCHHH--HHHHHH
T ss_pred hhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHHH--HHHHHH
Confidence 44444454 3455666789998877 77654 466767766531 1233344679998764 666666
Q ss_pred h-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe-ec
Q 010610 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SG 416 (506)
Q Consensus 339 ~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL-s~ 416 (506)
+ +|.|-+. .|-. +. -.+.++.++++|+-++++.. -.+|- | ....+.++.|.|++ |-
T Consensus 108 aGAd~itvH-----~Ea~-~~----~~~~i~~ir~~G~k~Gvaln-------p~Tp~--e---~l~~~l~~vD~VlvMsV 165 (246)
T 3inp_A 108 AGATSIVFH-----PEAS-EH----IDRSLQLIKSFGIQAGLALN-------PATGI--D---CLKYVESNIDRVLIMSV 165 (246)
T ss_dssp HTCSEEEEC-----GGGC-SC----HHHHHHHHHTTTSEEEEEEC-------TTCCS--G---GGTTTGGGCSEEEEECS
T ss_pred cCCCEEEEc-----cccc-hh----HHHHHHHHHHcCCeEEEEec-------CCCCH--H---HHHHHHhcCCEEEEeee
Confidence 6 8999885 1211 12 26778888999999999852 11222 2 22355567998875 44
Q ss_pred cccCC-----CCHHHHHHHHHHHHH
Q 010610 417 ETAHG-----KFPLKAVKVMHTVSL 436 (506)
Q Consensus 417 ETA~G-----~yPveaV~~m~~I~~ 436 (506)
+.-.| .+.++=++.+++++.
T Consensus 166 ~PGfgGQ~fi~~~l~KI~~lr~~~~ 190 (246)
T 3inp_A 166 NPGFGGQKFIPAMLDKAKEISKWIS 190 (246)
T ss_dssp CTTC--CCCCTTHHHHHHHHHHHHH
T ss_pred cCCCCCcccchHHHHHHHHHHHHHH
Confidence 43333 234444555555443
No 147
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=69.81 E-value=43 Score=34.27 Aligned_cols=149 Identities=20% Similarity=0.178 Sum_probs=81.9
Q ss_pred ccCHHHhHhh---HhcCCcEEEEc----------cCCCHHHHHHHHHHHHhc------CCCceEEEecCChhhhhhHHHH
Q 010610 276 EKDWDDIKFG---VDNKVDFYAVS----------FVKDAQVVHELKNYLKSC------GADIHVIVKIESADSIPNLHSI 336 (506)
Q Consensus 276 ekD~~dI~~a---l~~gvD~IalS----------fV~saedV~~lr~~l~~~------~~~i~IIaKIEt~~aveNldeI 336 (506)
+.+.+|...+ +..++|+|-+. +.++++.+.++.+.+.+. ..+.+|++||=---..+++.+|
T Consensus 160 ~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~i 239 (367)
T 3zwt_A 160 VDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDI 239 (367)
T ss_dssp SCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHH
Confidence 3455555432 33468998774 345566666665555432 2468999999432222355666
Q ss_pred HHh-----CCEEEEc-----CCCc-----ccCCC-C---CcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCCh
Q 010610 337 ITA-----SDGAMVA-----RGDL-----GAELP-I---EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTR 395 (506)
Q Consensus 337 l~~-----sDGImIa-----RGDL-----gvelg-~---e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtR 395 (506)
++. +|||.+- |-++ +.+.| + ...+...+.+-+..++. .+|+|....+- |
T Consensus 240 a~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~---------s- 309 (367)
T 3zwt_A 240 ASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS---------S- 309 (367)
T ss_dssp HHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC---------S-
T ss_pred HHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC---------C-
Confidence 554 7999874 2111 11111 1 12233344444444455 68998765322 2
Q ss_pred hhcccHHHHHHhCcceeEeecccc-CCCCHHHHHHHHHHHHHHHhccc
Q 010610 396 AEVSDIAIAVREGADAVMLSGETA-HGKFPLKAVKVMHTVSLRTEATI 442 (506)
Q Consensus 396 AEv~Dvanav~dG~D~vmLs~ETA-~G~yPveaV~~m~~I~~~aE~~~ 442 (506)
..|+..++..|+|+||+..--- .| | .++.+|.+..+..+
T Consensus 310 --~~da~~~l~~GAd~V~vgra~l~~g--P----~~~~~i~~~l~~~m 349 (367)
T 3zwt_A 310 --GQDALEKIRAGASLVQLYTALTFWG--P----PVVGKVKRELEALL 349 (367)
T ss_dssp --HHHHHHHHHHTCSEEEESHHHHHHC--T----HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHcCCCEEEECHHHHhcC--c----HHHHHHHHHHHHHH
Confidence 3578888999999999963221 13 3 24555665555443
No 148
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.59 E-value=35 Score=32.21 Aligned_cols=148 Identities=16% Similarity=0.107 Sum_probs=87.3
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec-------CC----hhhhhhHHHHHHh-----CCEE
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-------ES----ADSIPNLHSIITA-----SDGA 343 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI-------Et----~~aveNldeIl~~-----sDGI 343 (506)
+.++++.+.|+|+|-+.+..-.+++.++++.+++.|-.+..+.-- .. .++++.+...++. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 456788899999999998877889999999998777654433211 01 2345566666654 5677
Q ss_pred EEcCCCccc--CCC-----CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 344 MVARGDLGA--ELP-----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 344 mIaRGDLgv--elg-----~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
.+..|.-.. ..| ++.+....+++...|+++|..+.+=+. ..+..+...|-.++.++...+ |.+.+-+.-
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~--~~~~~~~~~~~~~~~~ll~~v--~~~~vg~~~ 197 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL--NRKECFYLRQVADAASLCRDI--NNPGVRCMG 197 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC--CTTTCSSCCCHHHHHHHHHHH--CCTTEEEEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec--CcccCcccCCHHHHHHHHHHc--CCCCeeEEe
Confidence 776553221 122 124556667888899999988775421 111122233444444444444 233344443
Q ss_pred ccc----CCCCHHHHHHHH
Q 010610 417 ETA----HGKFPLKAVKVM 431 (506)
Q Consensus 417 ETA----~G~yPveaV~~m 431 (506)
+|. .|..|.+.++.+
T Consensus 198 D~~h~~~~g~d~~~~l~~~ 216 (287)
T 3kws_A 198 DFWHMTWEETSDMGAFISG 216 (287)
T ss_dssp EHHHHHHHCSCHHHHHHHH
T ss_pred ehHHHHhcCCCHHHHHHHh
Confidence 443 266677776644
No 149
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=69.06 E-value=15 Score=36.82 Aligned_cols=96 Identities=5% Similarity=0.099 Sum_probs=58.1
Q ss_pred HhHhhHhcCCcEEEE-------ccCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAV-------SFVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~Ial-------SfV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+ +.....|..+-++..++..+.+++||+-+= |.++++.....-+. +||+|+-+-.
T Consensus 48 li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 127 (315)
T 3si9_A 48 FVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPY 127 (315)
T ss_dssp HHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 346788999999974 333344444444555555667889998764 56666666555555 8999987543
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+ .+..-..|.+.+.|+++.
T Consensus 128 y~~-~~~~~l---~~~f~~va~a~~lPiilY 154 (315)
T 3si9_A 128 YNR-PNQRGL---YTHFSSIAKAISIPIIIY 154 (315)
T ss_dssp SSC-CCHHHH---HHHHHHHHHHCSSCEEEE
T ss_pred CCC-CCHHHH---HHHHHHHHHcCCCCEEEE
Confidence 321 111233 333334455568888876
No 150
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=68.86 E-value=19 Score=35.52 Aligned_cols=97 Identities=9% Similarity=0.063 Sum_probs=58.5
Q ss_pred HHhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. +.-|. |..+-++...+..+.+++||+-+=+ .++++.....-+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 34467889999999762 33344 4444444445555667889998754 6777766666555 899999754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- .+.+.+. +..-..|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~---~~f~~va~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR-PSQEGLY---QHFKMVHDAIDIPIIVY 132 (297)
T ss_dssp TTTC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 4321 1212233 23333455667888875
No 151
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=68.81 E-value=45 Score=32.24 Aligned_cols=136 Identities=17% Similarity=0.207 Sum_probs=71.1
Q ss_pred hhHh-cCCcEEEEccC------------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHH----Hh-CCEEEE
Q 010610 284 FGVD-NKVDFYAVSFV------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII----TA-SDGAMV 345 (506)
Q Consensus 284 ~al~-~gvD~IalSfV------------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl----~~-sDGImI 345 (506)
.+.+ .|+|+|-+.|- .+++.+.++.+.+.+.- ..+|++|+= + .+.++.+++ +. +|+|.+
T Consensus 119 ~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~-~-~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 119 KIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLS-P-NVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEEC-S-CSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEEC-C-ChHHHHHHHHHHHHcCCCEEEE
Confidence 3344 89999977542 34455555555554431 467888874 1 223333332 22 799998
Q ss_pred cCCCcccC-----------------CCCCcHHHHHHHHHHHH-HHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh
Q 010610 346 ARGDLGAE-----------------LPIEEVPLLQEEIIRTC-RSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE 407 (506)
Q Consensus 346 aRGDLgve-----------------lg~e~V~~~Qk~II~~c-~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d 407 (506)
.-+..+.. -|....+.. -..++.. +....|+|....+ -+ ..|+..++..
T Consensus 196 ~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~GGI---------~~---~~d~~~~l~~ 262 (311)
T 1ep3_A 196 INTLMGVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGMGGV---------AN---AQDVLEMYMA 262 (311)
T ss_dssp CCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEECSSC---------CS---HHHHHHHHHH
T ss_pred eCCCcccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEECCc---------CC---HHHHHHHHHc
Confidence 32111110 011122222 2334333 3458998876432 12 2468888889
Q ss_pred CcceeEeeccccCCCCHHHHHHHHHHHHHHHhcc
Q 010610 408 GADAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT 441 (506)
Q Consensus 408 G~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~ 441 (506)
|+|++++..---.+.. ++.++.+..+..
T Consensus 263 GAd~V~vg~~~l~~p~------~~~~i~~~l~~~ 290 (311)
T 1ep3_A 263 GASAVAVGTANFADPF------VCPKIIDKLPEL 290 (311)
T ss_dssp TCSEEEECTHHHHCTT------HHHHHHHHHHHH
T ss_pred CCCEEEECHHHHcCcH------HHHHHHHHHHHH
Confidence 9999998643333332 344555555443
No 152
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=68.77 E-value=93 Score=30.60 Aligned_cols=154 Identities=15% Similarity=0.066 Sum_probs=97.8
Q ss_pred CCccCHHHh-HhhHhcCCcEEEEc-cCCCHHHHHHHHHHHHhcCCCceEEEecCC-hhhhhhHHHHHHh-----CC--EE
Q 010610 274 ITEKDWDDI-KFGVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKIES-ADSIPNLHSIITA-----SD--GA 343 (506)
Q Consensus 274 ltekD~~dI-~~al~~gvD~IalS-fV~saedV~~lr~~l~~~~~~i~IIaKIEt-~~aveNldeIl~~-----sD--GI 343 (506)
++..|+..| +...+.|+|.|=+. +..++.|.+.++.+.+. ..+..+.+-.-+ ..++ +..++. .| .+
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di---~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDI---DRAEEALKDAVSPQIHI 99 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHH---HHHHHHHTTCSSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHH---HHHHHHHhhcCCCEEEE
Confidence 344565555 45556899999664 45577788887776544 345555555433 2333 333332 23 45
Q ss_pred EEcCCCccc----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccc
Q 010610 344 MVARGDLGA----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGET 418 (506)
Q Consensus 344 mIaRGDLgv----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ET 418 (506)
+++-.|+-. ....++.....+++++.|+++|..|.+.... .++-+...+.+++. +...|+|.|-|. +|
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d------~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT 172 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPED------ATRSDRAFLIEAVQTAIDAGATVINIP-DT 172 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEET------GGGSCHHHHHHHHHHHHHTTCCEEEEE-CS
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEecc------CCCCCHHHHHHHHHHHHHcCCCEEEec-CC
Confidence 555555432 3344567777889999999999998875421 11222333555555 556899999995 88
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q 010610 419 AHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 419 A~G~yPveaV~~m~~I~~~a 438 (506)
.=.-.|.+.-+.+..+....
T Consensus 173 ~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 173 VGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp SSCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhc
Confidence 88889999888888876654
No 153
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=68.63 E-value=19 Score=35.61 Aligned_cols=96 Identities=14% Similarity=0.095 Sum_probs=58.8
Q ss_pred HhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. +.-|. |..+-++...+..+.+++||+-+= |.++++....--+. +|++|+-+-.
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 117 (301)
T 1xky_A 38 LVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPY 117 (301)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 3467789999999862 33344 444444444555567889999875 46777766666555 8999986543
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+ .+..-..|.+.+.|+++.
T Consensus 118 y~~-~s~~~l---~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 118 YNK-PSQEGM---YQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp SSC-CCHHHH---HHHHHHHHHTCSSCEEEE
T ss_pred CCC-CCHHHH---HHHHHHHHHhcCCCEEEE
Confidence 321 111223 333334455668898875
No 154
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=68.58 E-value=57 Score=31.06 Aligned_cols=129 Identities=16% Similarity=0.208 Sum_probs=76.6
Q ss_pred HhHhhHhcCCcEEEE-----ccCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCc
Q 010610 281 DIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDL 350 (506)
Q Consensus 281 dI~~al~~gvD~Ial-----SfV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDL 350 (506)
.++.+ +.|+||+-+ .||.+ +..++.+|++. +..+-+-.||++++.. ++...++ +|+|.|-
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh---- 87 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDY--IAQLARAGADFITLH---- 87 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGT--HHHHHHHTCSEEEEC----
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHHH--HHHHHHcCCCEEEEC----
Confidence 34455 788887532 34433 55666666542 3456677899998653 5777766 8999874
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe-eccccCC--CCH---
Q 010610 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SGETAHG--KFP--- 424 (506)
Q Consensus 351 gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL-s~ETA~G--~yP--- 424 (506)
.|-+ -. --.+.++.++++|+-++++. ||. |..| ....+.+++|.+++ |-+.-.| +|.
T Consensus 88 -~Ea~---~~-~~~~~i~~i~~~G~k~gv~l--------np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~ 150 (231)
T 3ctl_A 88 -PETI---NG-QAFRLIDEIRRHDMKVGLIL--------NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIPEM 150 (231)
T ss_dssp -GGGC---TT-THHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCTTH
T ss_pred -cccC---Cc-cHHHHHHHHHHcCCeEEEEE--------ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccHHH
Confidence 1220 11 23588999999999999985 232 2222 23445678998863 4444333 344
Q ss_pred HHHHHHHHHHHH
Q 010610 425 LKAVKVMHTVSL 436 (506)
Q Consensus 425 veaV~~m~~I~~ 436 (506)
.+=++.+++++.
T Consensus 151 l~kI~~lr~~~~ 162 (231)
T 3ctl_A 151 LDKLAELKAWRE 162 (231)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 444455554443
No 155
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=68.27 E-value=62 Score=32.18 Aligned_cols=131 Identities=14% Similarity=0.164 Sum_probs=76.2
Q ss_pred HhHhhHhcCCcEEEEc-cCCCHH------HHHHHHHHHHhcCCCceEEEecCChhh---------hhhHHHHHHh--CCE
Q 010610 281 DIKFGVDNKVDFYAVS-FVKDAQ------VVHELKNYLKSCGADIHVIVKIESADS---------IPNLHSIITA--SDG 342 (506)
Q Consensus 281 dI~~al~~gvD~IalS-fV~sae------dV~~lr~~l~~~~~~i~IIaKIEt~~a---------veNldeIl~~--sDG 342 (506)
.++.+++.|+|.|.+- |+.+.. ++.++++.+.+.| +++|+ |++.+ +...-.+... +|.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G--lpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~ 205 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG--MPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQI 205 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT--CCEEE--EECC----CCSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC--CEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCE
Confidence 3567889999988654 444432 2334444444433 55554 44332 2222333333 687
Q ss_pred EEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCC-CChhhcccHHHHHHhCcceeEeeccccCC
Q 010610 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPT-PTRAEVSDIAIAVREGADAVMLSGETAHG 421 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~-PtRAEv~Dvanav~dG~D~vmLs~ETA~G 421 (506)
|=.. ++.+. .+++.+.| ..||+++.- +. +++.=...+..++..|++++...-..-.-
T Consensus 206 VKt~-------~t~e~----~~~vv~~~---~vPVv~~GG--------~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 206 IKTY-------YVEKG----FERIVAGC---PVPIVIAGG--------KKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp EEEE-------CCTTT----HHHHHHTC---SSCEEEECC--------SCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred EEeC-------CCHHH----HHHHHHhC---CCcEEEEEC--------CCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 6654 22122 24444444 689987642 11 22222455778899999999876666666
Q ss_pred CCHHHHHHHHHHHHHH
Q 010610 422 KFPLKAVKVMHTVSLR 437 (506)
Q Consensus 422 ~yPveaV~~m~~I~~~ 437 (506)
+.|.+.++.+..++.+
T Consensus 264 ~dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 264 DHPVAMMKAVQAVVHH 279 (295)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhC
Confidence 7899999999988754
No 156
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=67.92 E-value=32 Score=33.10 Aligned_cols=126 Identities=10% Similarity=0.039 Sum_probs=71.8
Q ss_pred hhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEEEcCC---CcccCCCC
Q 010610 284 FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARG---DLGAELPI 356 (506)
Q Consensus 284 ~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGImIaRG---DLgvelg~ 356 (506)
.+.+.|+|+|-+.--. -.+.++|+++ +....|-+-+ .+.+|+..+ +|.|.+++- +.--..+.
T Consensus 107 lA~~~gAdGVHLg~~d--l~~~~~r~~~---~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~ 175 (243)
T 3o63_A 107 IARAAGADVLHLGQRD--LPVNVARQIL---APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAA 175 (243)
T ss_dssp HHHHHTCSEEEECTTS--SCHHHHHHHS---CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----C
T ss_pred HHHHhCCCEEEecCCc--CCHHHHHHhh---CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcch
Confidence 3677899999887422 2345566654 3333444433 444454433 799999862 11111111
Q ss_pred CcHHHHHHHHHHHHHH--cCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHH
Q 010610 357 EEVPLLQEEIIRTCRS--MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~--~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I 434 (506)
..+. .+-+.+.. ..+|++.... + +. .++......|+|++.+.+.--.-..|.++++.+.+.
T Consensus 176 ~gl~----~l~~~~~~~~~~iPvvAiGG---------I-~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~ 238 (243)
T 3o63_A 176 PGLG----LVRVAAELGGDDKPWFAIGG---------I-NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSA 238 (243)
T ss_dssp CCHH----HHHHHHTC---CCCEEEESS---------C-CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHH
T ss_pred hhHH----HHHHHHHhccCCCCEEEecC---------C-CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 1111 11122222 3789876542 2 22 357788889999999865555557799999998877
Q ss_pred HHH
Q 010610 435 SLR 437 (506)
Q Consensus 435 ~~~ 437 (506)
+.+
T Consensus 239 ~~~ 241 (243)
T 3o63_A 239 LTA 241 (243)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
No 157
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.87 E-value=32 Score=34.19 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=57.1
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++..++.. .+++||+-+ -|.++++......+. +|++|+-+-.
T Consensus 34 lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 34 LTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 3468889999999873 333344444445555556 678999976 455666666555555 8999997554
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcC--CcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMG--KAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~G--kPvivA 380 (506)
. -...+.+ .+..-..|.+.+ .|+++.
T Consensus 113 ~--~~s~~~l---~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 113 S--LRTDEQI---TTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp T--CCSHHHH---HHHHHHHHHHHCTTSCEEEE
T ss_pred C--CCCHHHH---HHHHHHHHHhCCCCCcEEEE
Confidence 2 1122223 333334445556 888874
No 158
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=67.71 E-value=94 Score=31.75 Aligned_cols=159 Identities=11% Similarity=0.096 Sum_probs=100.3
Q ss_pred CCCccCHHHhHhh-HhcCCcEEEE-ccCCCHHHHHHHHHHHHhcCCCceEEEec-CChhhhhhHHHHHH-h-CC--EEEE
Q 010610 273 SITEKDWDDIKFG-VDNKVDFYAV-SFVKDAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLHSIIT-A-SD--GAMV 345 (506)
Q Consensus 273 ~ltekD~~dI~~a-l~~gvD~Ial-SfV~saedV~~lr~~l~~~~~~i~IIaKI-Et~~aveNldeIl~-~-sD--GImI 345 (506)
.++..|+..|... .+.|+|.|=+ +|+.++.|.+.++.+.+. ..+..+.+-. =+...++..-+-+. . .| .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 4566676666544 4689999866 567788899999887643 3444443332 14444443222221 1 23 4566
Q ss_pred cCCCccc----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccccC
Q 010610 346 ARGDLGA----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 420 (506)
Q Consensus 346 aRGDLgv----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ETA~ 420 (506)
+--|+-. .+..+++.....++++.|+.+|..|.+.... ..+-+...+.+++. +...|+|.|.|. +|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed------~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCED------ALRSEIDFLAEICGAVIEAGATTINIP-DTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEET------GGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCC------CCccCHHHHHHHHHHHHHcCCCEEEec-CccC
Confidence 6566532 2334567777778999999999988765431 11112222445554 567899999995 9998
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 010610 421 GKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 421 G~yPveaV~~m~~I~~~aE 439 (506)
.-.|.+.-+.+..+.+..-
T Consensus 182 ~~~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKTP 200 (370)
T ss_dssp CCCHHHHHHHHHHHHHHST
T ss_pred CcCHHHHHHHHHHHHHhCC
Confidence 9999999888888876653
No 159
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=67.68 E-value=23 Score=34.24 Aligned_cols=119 Identities=15% Similarity=0.038 Sum_probs=69.5
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEE-E-cCC-CcccCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM-V-ARG-DLGAELP 355 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGIm-I-aRG-DLgvelg 355 (506)
.+.++.+.+.|+|+|.++-... +++.++.+.++++|.+. +.-+.-....+.+.+|++.++|++ + ..- =-|..-+
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~~--i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~ 188 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIAP--IFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENR 188 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCEE--ECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSC
T ss_pred HHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCcE--EEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccC
Confidence 4566777889999999987664 66888888888877542 222222234567888998887543 2 211 1111111
Q ss_pred C-CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 356 I-EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 356 ~-e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
. +.+....+++-+ ..+.|+++... .=|. .++..++..|+|+++..
T Consensus 189 ~~~~~~~~i~~lr~---~~~~pi~vggG---------I~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 189 GALPLHHLIEKLKE---YHAAPALQGFG---------ISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp C--CCHHHHHHHHH---TTCCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred CCchHHHHHHHHHh---ccCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 1 122222222222 23789887642 2222 24667788999999974
No 160
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=67.59 E-value=12 Score=35.04 Aligned_cols=124 Identities=15% Similarity=0.193 Sum_probs=66.1
Q ss_pred HhHhhHhcCCcEEEEc-----cCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEcCCCccc
Q 010610 281 DIKFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVARGDLGA 352 (506)
Q Consensus 281 dI~~al~~gvD~IalS-----fV~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIaRGDLgv 352 (506)
..+...+.|+|+|-+. |...... ..++++.+.. ++++++ .|.+++ .+++.++. +|+|++++..|.-
T Consensus 36 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l~~ 109 (244)
T 2y88_A 36 AALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTAALEN 109 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHhhC
Confidence 3355678899999884 5555544 4444443332 456666 476655 36666666 8999998766521
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhc--C-CCCChh------h-cccHHHHHHhCcceeEeeccccCCC
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIV--H-PTPTRA------E-VSDIAIAVREGADAVMLSGETAHGK 422 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~--~-~~PtRA------E-v~Dvanav~dG~D~vmLs~ETA~G~ 422 (506)
|. .+.+..+..|.-++++-... ++ + ..-+|- + +..+-.+...|+|.+++++=+..|.
T Consensus 110 -------p~---~~~~~~~~~g~~~~~~ld~~---~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~ 176 (244)
T 2y88_A 110 -------PQ---WCARVIGEHGDQVAVGLDVQ---IIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGT 176 (244)
T ss_dssp -------HH---HHHHHHHHHGGGEEEEEEEE---EETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTT
T ss_pred -------hH---HHHHHHHHcCCCEEEEEecc---ccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCccc
Confidence 12 23333344443344332211 00 0 000010 1 2223445677999999887665554
Q ss_pred C
Q 010610 423 F 423 (506)
Q Consensus 423 y 423 (506)
|
T Consensus 177 ~ 177 (244)
T 2y88_A 177 L 177 (244)
T ss_dssp T
T ss_pred c
Confidence 4
No 161
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=67.49 E-value=24 Score=33.07 Aligned_cols=133 Identities=13% Similarity=0.180 Sum_probs=68.7
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCCceEEEe-----cCCh-------hhhhhHHHHHHh-CCE
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVK-----IESA-------DSIPNLHSIITA-SDG 342 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~i~IIaK-----IEt~-------~aveNldeIl~~-sDG 342 (506)
+.++++.+++.|+|.|.+.. ..+++.+.++.+ ..|..+.+-.. +++. ..++.+.+..+. +|.
T Consensus 86 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~---~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~ 162 (244)
T 1vzw_A 86 DDDTLAAALATGCTRVNLGTAALETPEWVAKVIA---EHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCAR 162 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHH---HHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHH---HcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCE
Confidence 45678888999999998763 244444444444 33433322222 3322 334445555555 787
Q ss_pred EEEcCC--CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh---CcceeEeecc
Q 010610 343 AMVARG--DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE---GADAVMLSGE 417 (506)
Q Consensus 343 ImIaRG--DLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d---G~D~vmLs~E 417 (506)
|++--. |... -++ .+.. -+++ +...+.|++.... .-+ ..|+..+... |+|++|+..-
T Consensus 163 i~~~~~~~~~~~-~g~-~~~~-~~~i---~~~~~ipvia~GG---------I~~---~~d~~~~~~~~~~Gadgv~vG~a 224 (244)
T 1vzw_A 163 YVVTDIAKDGTL-QGP-NLEL-LKNV---CAATDRPVVASGG---------VSS---LDDLRAIAGLVPAGVEGAIVGKA 224 (244)
T ss_dssp EEEEEC--------CC-CHHH-HHHH---HHTCSSCEEEESC---------CCS---HHHHHHHHTTGGGTEEEEEECHH
T ss_pred EEEeccCccccc-CCC-CHHH-HHHH---HHhcCCCEEEECC---------CCC---HHHHHHHHhhccCCCceeeeeHH
Confidence 776421 1111 122 2222 2222 2445899997642 222 2356666666 9999998643
Q ss_pred ccCCCCH-HHHHHHH
Q 010610 418 TAHGKFP-LKAVKVM 431 (506)
Q Consensus 418 TA~G~yP-veaV~~m 431 (506)
-..++++ .++++.+
T Consensus 225 l~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 225 LYAKAFTLEEALEAT 239 (244)
T ss_dssp HHTTSSCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHh
Confidence 3345443 3444443
No 162
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=67.47 E-value=34 Score=32.49 Aligned_cols=109 Identities=9% Similarity=0.044 Sum_probs=69.2
Q ss_pred ccCHHHhHhh-HhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec--CCh-------hhhhhHHHHHHh-CCEEE
Q 010610 276 EKDWDDIKFG-VDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI--ESA-------DSIPNLHSIITA-SDGAM 344 (506)
Q Consensus 276 ekD~~dI~~a-l~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI--Et~-------~aveNldeIl~~-sDGIm 344 (506)
+.+...+..+ .+.|+.+|-+ .+.++++++|+.. +++|+..+ .-. .-++.+++.++. +|.|.
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~ 106 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIA 106 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred cchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEE
Confidence 3455555544 4579999886 5889998888754 46666432 100 123456666666 89988
Q ss_pred EcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeE
Q 010610 345 VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVM 413 (506)
Q Consensus 345 IaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vm 413 (506)
+.-..+ ...+ ..+++++.+++.|.+++.-.. |..| .-.+...|+|.+-
T Consensus 107 l~~~~~---~~p~----~l~~~i~~~~~~g~~v~~~v~-----------t~ee---a~~a~~~Gad~Ig 154 (229)
T 3q58_A 107 FDASFR---SRPV----DIDSLLTRIRLHGLLAMADCS-----------TVNE---GISCHQKGIEFIG 154 (229)
T ss_dssp EECCSS---CCSS----CHHHHHHHHHHTTCEEEEECS-----------SHHH---HHHHHHTTCSEEE
T ss_pred ECcccc---CChH----HHHHHHHHHHHCCCEEEEecC-----------CHHH---HHHHHhCCCCEEE
Confidence 753321 1112 456788888889999887532 3333 4577889999995
No 163
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=67.37 E-value=10 Score=39.83 Aligned_cols=104 Identities=12% Similarity=0.077 Sum_probs=59.8
Q ss_pred CccCCCCCCccCHHHhH-hhHhcCCcEEEEccCCC---------------------HHHHHHHHHHHHhcCCCceEEE--
Q 010610 267 KSATLPSITEKDWDDIK-FGVDNKVDFYAVSFVKD---------------------AQVVHELKNYLKSCGADIHVIV-- 322 (506)
Q Consensus 267 ~~~~lp~ltekD~~dI~-~al~~gvD~IalSfV~s---------------------aedV~~lr~~l~~~~~~i~IIa-- 322 (506)
+++. |.+++.|..++. .+.+.|+|+|.++.-.. +..++.++++-+..+.+++||+
T Consensus 274 VKi~-pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~G 352 (415)
T 3i65_A 274 VKLA-PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASG 352 (415)
T ss_dssp EEEC-SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECS
T ss_pred EEec-CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 4443 566665666654 56789999999986321 1122334444344455788887
Q ss_pred ecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCC
Q 010610 323 KIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (506)
Q Consensus 323 KIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~Gk 375 (506)
-|.|.+-+ ++-|..-+|+|+|+|+=+.- |..-+..+.+.+-+...+.|.
T Consensus 353 GI~s~eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 353 GIFSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp SCCSHHHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCC
Confidence 36665443 23333338999999985521 333445555555555555554
No 164
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=67.22 E-value=24 Score=34.76 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=57.9
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++...+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 33 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 112 (297)
T 3flu_A 33 LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPY 112 (297)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 3467889999999873 22233333334444555567889998764 56666666555555 8999987543
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ... ..+.+..-..|.+.+.|+++.
T Consensus 113 y~~-~~~---~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 113 YNK-PSQ---EGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp SSC-CCH---HHHHHHHHHHHHHCCSCEEEE
T ss_pred CCC-CCH---HHHHHHHHHHHHhCCCCEEEE
Confidence 321 111 223334444455668999876
No 165
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=67.17 E-value=22 Score=34.94 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=58.0
Q ss_pred HHhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. .....|..+-++...+..+.+++||+-+=+ .++++....--+. +||+|+.+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34467889999999752 333344444444555555667889988744 6666666655554 899998754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- ...+.+. +..-.-|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~---~~f~~ia~a~~lPiilY 132 (292)
T 2vc6_A 105 YYNK-PTQEGIY---QHFKAIDAASTIPIIVY 132 (292)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhCCCCEEEE
Confidence 3311 1112222 33333455668898873
No 166
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=67.09 E-value=47 Score=31.14 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=88.5
Q ss_pred HHhHhhHhcCCcEEEEccC-------CCHHHHHHHHHHHHhcCCCceEEEe-cC------ChhhhhhHHHHHHh-----C
Q 010610 280 DDIKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVK-IE------SADSIPNLHSIITA-----S 340 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV-------~saedV~~lr~~l~~~~~~i~IIaK-IE------t~~aveNldeIl~~-----s 340 (506)
+.++.+.+.|.|+|-+... .+.+++.++++.+++.|-.+..+.- .. ..+.++.+...++. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 4567888999999988432 2357888999999888776555431 10 12445666666655 5
Q ss_pred CEEEEcCCCcccCCC----CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 341 DGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 341 DGImIaRGDLgvelg----~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
+.|.+-.|...-... ++.+...-+++...|+++|..+.+=+ +-.+...|-.++.++...+. .+.+-+.-
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~-----~~~~~~~~~~~~~~l~~~~~--~~~vg~~~ 171 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLET-----HPNTLTDTLPSTLELLGEVD--HPNLKINL 171 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC-----CTTSTTSSHHHHHHHHHHHC--CTTEEEEE
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEec-----CCCcCcCCHHHHHHHHHhcC--CCCeEEEe
Confidence 788777775432221 12455666788888999998777643 22333345555555555542 33344433
Q ss_pred ccc----CCCCHHHHHHHHH
Q 010610 417 ETA----HGKFPLKAVKVMH 432 (506)
Q Consensus 417 ETA----~G~yPveaV~~m~ 432 (506)
+|. .|..|.+.++.+.
T Consensus 172 D~~h~~~~g~d~~~~l~~~~ 191 (286)
T 3dx5_A 172 DFLHIWESGADPVDSFQQLR 191 (286)
T ss_dssp EHHHHHHTTCCHHHHHHHHG
T ss_pred ccccHhhcCCCHHHHHHHHH
Confidence 443 3666777776553
No 167
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=67.07 E-value=10 Score=38.69 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=46.7
Q ss_pred CHHHhHhhHhcCCcEEEEcc------------CCCHHHHHHHHHH----HHhcCC-CceEEE--ecCChhhhhhHHHHHH
Q 010610 278 DWDDIKFGVDNKVDFYAVSF------------VKDAQVVHELKNY----LKSCGA-DIHVIV--KIESADSIPNLHSIIT 338 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf------------V~saedV~~lr~~----l~~~~~-~i~IIa--KIEt~~aveNldeIl~ 338 (506)
+.++.+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. +++||+ .|-+..-+ +..+..
T Consensus 221 t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv--~kalal 298 (393)
T 2qr6_A 221 DYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDV--VKAIAC 298 (393)
T ss_dssp SHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHH--HHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHH--HHHHHc
Confidence 45678888899999999975 3444455555554 232343 388888 45554332 222222
Q ss_pred hCCEEEEcCCCcccCC
Q 010610 339 ASDGAMVARGDLGAEL 354 (506)
Q Consensus 339 ~sDGImIaRGDLgvel 354 (506)
=+|++++||.=|+..-
T Consensus 299 GA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 299 GADAVVLGSPLARAEE 314 (393)
T ss_dssp TCSEEEECGGGGGSTT
T ss_pred CCCEEEECHHHHcCCC
Confidence 3899999998665543
No 168
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=66.95 E-value=41 Score=33.34 Aligned_cols=147 Identities=11% Similarity=0.076 Sum_probs=87.9
Q ss_pred CCCCccCHHHhHhhHhcCCcEEEEccC-------------CCHHHHHHHHHHHHhcCCCceEEEecCC-------hhhhh
Q 010610 272 PSITEKDWDDIKFGVDNKVDFYAVSFV-------------KDAQVVHELKNYLKSCGADIHVIVKIES-------ADSIP 331 (506)
Q Consensus 272 p~ltekD~~dI~~al~~gvD~IalSfV-------------~saedV~~lr~~l~~~~~~i~IIaKIEt-------~~ave 331 (506)
.-+|-+|.---+.+-+.|+|.|.+..- -+.+++...-+.+.+.-....|++=++- .++++
T Consensus 20 ~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 20 AMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 345778888778888899999977531 1244444333334443455678787663 45788
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhh-------hhhhcCCCCChhh--cccH
Q 010610 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNML-------ESMIVHPTPTRAE--VSDI 401 (506)
Q Consensus 332 NldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmL-------eSMi~~~~PtRAE--v~Dv 401 (506)
|...+++. +++|-+-=|+ .+...|+++.++|+||+-.-.+. ....-..+..+++ +.|.
T Consensus 100 na~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA 167 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDA 167 (275)
T ss_dssp HHHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHH
Confidence 88888886 7999886551 34556777788999987322111 1111111112223 5566
Q ss_pred HHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 402 AIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 402 anav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
--+...|+|+++|=+ - |. +...+|+++..
T Consensus 168 ~a~~eAGA~~ivlE~-----v-p~---~~a~~it~~l~ 196 (275)
T 1o66_A 168 KAHDDAGAAVVLMEC-----V-LA---ELAKKVTETVS 196 (275)
T ss_dssp HHHHHTTCSEEEEES-----C-CH---HHHHHHHHHCS
T ss_pred HHHHHcCCcEEEEec-----C-CH---HHHHHHHHhCC
Confidence 668888999999942 1 32 23556666654
No 169
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=66.75 E-value=8 Score=41.37 Aligned_cols=51 Identities=16% Similarity=0.248 Sum_probs=42.6
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 108 r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
.+..+-+.+|...+..+.++.|+++|+++.=+|.+||..+.+.++++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 456677888888788999999999999999999999988777766666664
No 170
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=66.68 E-value=38 Score=33.76 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=58.3
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++...+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 50 lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 50 SIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 3467889999998753 22333444444444555567889999875 56666666666555 8999997544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+ .+..-..|.+.+.|+++.
T Consensus 130 y~~-~s~~~l---~~~f~~va~a~~lPiilY 156 (315)
T 3na8_A 130 YWK-LNEAEV---FQHYRAVGEAIGVPVMLY 156 (315)
T ss_dssp SSC-CCHHHH---HHHHHHHHHHCSSCEEEE
T ss_pred CCC-CCHHHH---HHHHHHHHHhCCCcEEEE
Confidence 321 122233 333344455667898876
No 171
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=66.14 E-value=63 Score=29.15 Aligned_cols=102 Identities=11% Similarity=0.163 Sum_probs=56.7
Q ss_pred HHHhHhhHhcCCcEEEEccC-CCHH----HHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCccc
Q 010610 279 WDDIKFGVDNKVDFYAVSFV-KDAQ----VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGA 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV-~sae----dV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgv 352 (506)
.++++.+.+.|+|+|-+-+- .+.+ .+++++++... ..+.++.. +.++...+. +|+|.++-+|+.
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~--~~v~v~v~-------~~~~~a~~~gad~v~l~~~~~~- 98 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTRE--YDALFFVD-------DRVDVALAVDADGVQLGPEDMP- 98 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHH--TTCEEEEE-------SCHHHHHHHTCSEEEECTTSCC-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH--cCCeEEEc-------ChHHHHHHcCCCEEEECCccCC-
Confidence 35677888999999987532 1332 23334444433 23445542 344555554 899998766652
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
+..++ ... .++.+++... |..| +..+...|+|.+++++
T Consensus 99 ------~~~~~-----~~~-~~~~~~v~~~-----------t~~e---~~~~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 99 ------IEVAK-----EIA-PNLIIGASVY-----------SLEE---ALEAEKKGADYLGAGS 136 (215)
T ss_dssp ------HHHHH-----HHC-TTSEEEEEES-----------SHHH---HHHHHHHTCSEEEEEC
T ss_pred ------HHHHH-----HhC-CCCEEEEecC-----------CHHH---HHHHHhcCCCEEEEcC
Confidence 21221 111 3555554431 3333 3456778999999864
No 172
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=66.14 E-value=39 Score=30.65 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=60.7
Q ss_pred HhhHhcCCcEEEEccCC-CH-HHHHHHHHHHHhcCCCceEEE-ecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCc
Q 010610 283 KFGVDNKVDFYAVSFVK-DA-QVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEE 358 (506)
Q Consensus 283 ~~al~~gvD~IalSfV~-sa-edV~~lr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~ 358 (506)
+...+.|+|+|-+.+-. .+ +.++++|+.+. .+..|-+ .+.+++- +++-.+. +|.| ++++- +
T Consensus 29 ~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~-----~--- 93 (205)
T 1wa3_A 29 LAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHL-----D--- 93 (205)
T ss_dssp HHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSC-----C---
T ss_pred HHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCC-----C---
Confidence 34457799999775432 22 23566666553 2333433 3455442 3333333 8999 77651 1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 359 V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..+++.|++.|+|++.-. .|.. ++..++..|+|.+-+.
T Consensus 94 -----~~~~~~~~~~g~~vi~g~-----------~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 94 -----EEISQFCKEKGVFYMPGV-----------MTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -----HHHHHHHHHHTCEEECEE-----------CSHH---HHHHHHHTTCCEEEET
T ss_pred -----HHHHHHHHHcCCcEECCc-----------CCHH---HHHHHHHcCCCEEEEc
Confidence 468899999999998532 1322 4778899999998764
No 173
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=66.10 E-value=25 Score=34.55 Aligned_cols=96 Identities=8% Similarity=0.097 Sum_probs=57.4
Q ss_pred HhHhhHhcCCcEEEEccC-------CCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV-------~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|++.+.=- ...|..+-++...+..+.+++||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 27 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (291)
T 3tak_A 27 LVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPY 106 (291)
T ss_dssp HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 456788999999875321 223333334444455567789998764 56666666555555 8999987544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+. +..-.-|.+.+.|+++.
T Consensus 107 y~~-~~~~~l~---~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 107 YNK-PTQEGLY---QHYKAIAEAVELPLILY 133 (291)
T ss_dssp SSC-CCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 321 1222333 33334455568999876
No 174
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=65.84 E-value=23 Score=35.08 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=57.3
Q ss_pred HhHhhHhcCCcEEEE------ccCCCH-HHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAV------SFVKDA-QVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~Ial------SfV~sa-edV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+ ++.-|. |..+-++...+..+.+++||+-+=+ .++++....--+. +|++|+-+-.
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 117 (306)
T 1o5k_A 38 LVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPY 117 (306)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 346778999999986 233344 4444444445555678899998744 6677666665554 8999986543
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.- ...+.+. +..-.-|.+.+.|+++.
T Consensus 118 y~~-~s~~~l~---~~f~~va~a~~lPiilY 144 (306)
T 1o5k_A 118 YNK-PTQEGLY---QHYKYISERTDLGIVVY 144 (306)
T ss_dssp SSC-CCHHHHH---HHHHHHHTTCSSCEEEE
T ss_pred CCC-CCHHHHH---HHHHHHHHhCCCCEEEE
Confidence 311 1112222 22333345567888765
No 175
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=65.72 E-value=25 Score=35.16 Aligned_cols=97 Identities=7% Similarity=0.098 Sum_probs=58.1
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++..++..+.+++||+-+= |.++++.....-+. +||+|+-+-.
T Consensus 37 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 116 (318)
T 3qfe_A 37 YYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPA 116 (318)
T ss_dssp HHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 3467889999998763 23344444444455555677889999763 55666666555555 8999997542
Q ss_pred -cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 -LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 -Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.--...+.+ .+..-..|.+.+.|+++.
T Consensus 117 y~~kp~~~~~l---~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 117 YFGKATTPPVI---KSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp C---CCCHHHH---HHHHHHHHHHCSSCEEEE
T ss_pred ccCCCCCHHHH---HHHHHHHHhhCCCCEEEE
Confidence 2111111233 333444455668999876
No 176
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=65.69 E-value=65 Score=33.90 Aligned_cols=87 Identities=14% Similarity=0.161 Sum_probs=49.8
Q ss_pred Cce-EEEecCChhhhhhHHHHHHh-----CCEEEEcCCCc--------ccCCC-CCc--HHHHHHHHHHHHHH-c--CCc
Q 010610 317 DIH-VIVKIESADSIPNLHSIITA-----SDGAMVARGDL--------GAELP-IEE--VPLLQEEIIRTCRS-M--GKA 376 (506)
Q Consensus 317 ~i~-IIaKIEt~~aveNldeIl~~-----sDGImIaRGDL--------gvelg-~e~--V~~~Qk~II~~c~~-~--GkP 376 (506)
+.+ |++||=---..+++.+|++. +|||.+.-+-. +.+.+ +.- +....-++++..++ . .+|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 566 89998432222355555554 79998764421 01111 111 12223344555444 4 789
Q ss_pred EEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 377 vivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
+|....+. | ..|+..++..|+|+|++.
T Consensus 376 VIg~GGI~---------s---~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 376 IIASGGIF---------S---GLDALEKIEAGASVCQLY 402 (443)
T ss_dssp EEEESSCC---------S---HHHHHHHHHTTEEEEEES
T ss_pred EEEECCCC---------C---HHHHHHHHHcCCCEEEEc
Confidence 88765322 2 357889999999999986
No 177
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=65.57 E-value=34 Score=33.35 Aligned_cols=116 Identities=12% Similarity=0.188 Sum_probs=73.7
Q ss_pred HhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEE--EEcCCCcccCCCCC-
Q 010610 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGA--MVARGDLGAELPIE- 357 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGI--mIaRGDLgvelg~e- 357 (506)
-++.+.+.|+|++.+|-.- .++..++++.+++.|-+...++-=.| ..+.+.+|.+.++|+ ++.+ .|+ .|..
T Consensus 108 F~~~~~~aGvdG~IipDLP-~eE~~~~~~~~~~~Gl~~I~lvaP~t--~~eRi~~ia~~a~gFiY~Vs~--~Gv-TG~~~ 181 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELS-FEESDDLIKECERYNIALITLVSVTT--PKERVKKLVKHAKGFIYLLAS--IGI-TGTKS 181 (252)
T ss_dssp HHHHHHHTTEEEEECTTCC-GGGCHHHHHHHHHTTCEECEEEETTS--CHHHHHHHHTTCCSCEEEECC--SCS-SSCSH
T ss_pred HHHHHHHcCCCEEEeCCCC-HHHHHHHHHHHHHcCCeEEEEeCCCC--cHHHHHHHHHhCCCeEEEEec--CCC-CCccc
Confidence 4567789999999999874 56688888888887765332222222 258899999988776 3332 111 1222
Q ss_pred cHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 358 EVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.+..-.+..++..+++ +.|+++.. ..-+... +. .+..++|+++.-
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv~vGf---------GIst~e~---a~-~~~~~ADGVIVG 227 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPIFVGF---------GIQNNQD---VK-RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEES---------SCCSHHH---HH-HHTTTSSEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEc---------CcCCHHH---HH-HHHhcCCEEEEC
Confidence 3444456777777765 67999874 3333332 32 445679999874
No 178
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=65.23 E-value=47 Score=31.54 Aligned_cols=109 Identities=8% Similarity=0.040 Sum_probs=69.2
Q ss_pred ccCHHHhHhh-HhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEE--ecCCh-------hhhhhHHHHHHh-CCEEE
Q 010610 276 EKDWDDIKFG-VDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV--KIESA-------DSIPNLHSIITA-SDGAM 344 (506)
Q Consensus 276 ekD~~dI~~a-l~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIa--KIEt~-------~aveNldeIl~~-sDGIm 344 (506)
+.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++.++. +|.|.
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~ 106 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIA 106 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred cchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEE
Confidence 4455555544 4679998876 5788998888643 456665 32211 123456666666 89988
Q ss_pred EcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeE
Q 010610 345 VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVM 413 (506)
Q Consensus 345 IaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vm 413 (506)
+.-..+ ... ...+++++.++++|.++++-.. |..| .-.+...|+|.+-
T Consensus 107 l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v~-----------t~ee---a~~a~~~Gad~Ig 154 (232)
T 3igs_A 107 VDGTAR---QRP----VAVEALLARIHHHHLLTMADCS-----------SVDD---GLACQRLGADIIG 154 (232)
T ss_dssp EECCSS---CCS----SCHHHHHHHHHHTTCEEEEECC-----------SHHH---HHHHHHTTCSEEE
T ss_pred ECcccc---CCH----HHHHHHHHHHHHCCCEEEEeCC-----------CHHH---HHHHHhCCCCEEE
Confidence 753321 111 2456788888999999887532 3333 4577889999995
No 179
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=64.96 E-value=38 Score=32.00 Aligned_cols=130 Identities=14% Similarity=0.070 Sum_probs=61.3
Q ss_pred CHHHhHhhHhcCCcEEEEccCCC--HHHHHHHHHHHHhcC--C-Cce--EEE-------ecCChh--------hhhhHHH
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKD--AQVVHELKNYLKSCG--A-DIH--VIV-------KIESAD--------SIPNLHS 335 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~s--aedV~~lr~~l~~~~--~-~i~--IIa-------KIEt~~--------aveNlde 335 (506)
+.+++..+++.|+|+|.+.-.-- ..+...++++++..+ . .+. +=+ ++++.. ..+-+..
T Consensus 85 ~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 85 KMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp STHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred CHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 56778888889999998864311 114455555554444 2 221 111 122221 2233344
Q ss_pred HHHh-CCEEEEcC-CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeE
Q 010610 336 IITA-SDGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVM 413 (506)
Q Consensus 336 Il~~-sDGImIaR-GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vm 413 (506)
+.+. ++.|++-. .-=|...|+ .+ ..+-+.+...+.|++...- .-+. .|+..+...|+|+++
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~GG---------I~~~---ed~~~~~~~Gadgv~ 227 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSGY-DT----EMIRFVRPLTTLPIIASGG---------AGKM---EHFLEAFLAGADAAL 227 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSCC-CH----HHHHHHGGGCCSCEEEESC---------CCSH---HHHHHHHHHTCSEEE
T ss_pred HHHcCCCEEEEEeecCCCCcCCC-CH----HHHHHHHHHcCCCEEEeCC---------CCCH---HHHHHHHHcCCHHHH
Confidence 4444 67777632 111122232 22 1222233445899987642 3333 356666677999999
Q ss_pred eeccccCCCCH
Q 010610 414 LSGETAHGKFP 424 (506)
Q Consensus 414 Ls~ETA~G~yP 424 (506)
+..---.++++
T Consensus 228 vgsal~~~~~~ 238 (266)
T 2w6r_A 228 AASVFHFREID 238 (266)
T ss_dssp ESTTTC-----
T ss_pred ccHHHHcCCCC
Confidence 86443444433
No 180
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=64.57 E-value=12 Score=38.57 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=37.1
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 112 IVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 112 Ii~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
+-+.+|......+.++.++++|++++=||.+||..+.+.+.++.+|+
T Consensus 99 vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 99 VGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred EEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 44555655567999999999999999999999988766666666654
No 181
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=64.51 E-value=76 Score=30.06 Aligned_cols=118 Identities=19% Similarity=0.245 Sum_probs=72.6
Q ss_pred HHhHhhHhcCCcEEEE-----ccCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 280 DDIKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 280 ~dI~~al~~gvD~Ial-----SfV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGD 349 (506)
++++...+.|+|++-+ .||.+ ++.++++|+..+ ....+-+-.++++++. -++...++ +|+|-+-
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~-~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH--- 94 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG-QDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH--- 94 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHC-SSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEE---
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhC-CCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc---
Confidence 4455666789999999 88754 466777776540 0122334457899874 46777776 8999984
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe-eccccCCC
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SGETAHGK 422 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL-s~ETA~G~ 422 (506)
.|-+ +. -.+.++.++++|+.++++. +|. |..| ....+.+..|.+++ |-+.-.|-
T Consensus 95 --~Ea~-~~----~~~~i~~i~~~G~k~gval--------~p~-t~~e---~l~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 95 --LEAT-EN----PGALIKDIRENGMKVGLAI--------KPG-TSVE---YLAPWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp --GGGC-SC----HHHHHHHHHHTTCEEEEEE--------CTT-SCGG---GTGGGGGGCSEEEEESSCTTTCS
T ss_pred --cCCc-hh----HHHHHHHHHHcCCCEEEEE--------cCC-CCHH---HHHHHhccCCeEEEeeecCCCCC
Confidence 1221 12 3567888899999999985 221 1112 12244456888875 44554444
No 182
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=64.08 E-value=43 Score=33.29 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=57.2
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC--ChhhhhhHHHHHHh-CCEEEEcCCCc
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE--SADSIPNLHSIITA-SDGAMVARGDL 350 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE--t~~aveNldeIl~~-sDGImIaRGDL 350 (506)
.++|.++.|+|+|.+. .....|..+-++...+..+.+++||+-+= |.++++.....-+. +|++|+-+-.+
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 38 NVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVH 117 (314)
T ss_dssp HHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3467889999999753 33334444444555555667889998875 44555555544444 89999965433
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 351 GAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 351 gvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.- ...+.+. +..-..|.+.+.|+++.
T Consensus 118 ~~-~s~~~l~---~~f~~va~a~~lPiilY 143 (314)
T 3d0c_A 118 PY-ITDAGAV---EYYRNIIEALDAPSIIY 143 (314)
T ss_dssp SC-CCHHHHH---HHHHHHHHHSSSCEEEE
T ss_pred CC-CCHHHHH---HHHHHHHHhCCCCEEEE
Confidence 11 1112233 33334466678999885
No 183
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=64.06 E-value=9.8 Score=39.10 Aligned_cols=51 Identities=18% Similarity=0.288 Sum_probs=40.6
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHH
Q 010610 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 159 (506)
+..+.+.+|+.....+.++.++++|++++=||++||+++...+.++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677787655668889999999999999999999987777777777753
No 184
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=64.03 E-value=69 Score=30.10 Aligned_cols=137 Identities=8% Similarity=-0.015 Sum_probs=79.5
Q ss_pred hHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCC--ceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHH
Q 010610 285 GVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD--IHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPL 361 (506)
Q Consensus 285 al~~gvD~IalSfV~saedV~~lr~~l~~~~~~--i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~ 361 (506)
+.+.|+|++.+-..-..+.++++++.+++.|.. ..-+..+-+. ..+.+.++++. .|-+.+.++-++-.-|.-.-+.
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 467899999997766677799999988877632 2233344422 45666777763 5666666655433222211011
Q ss_pred HHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 362 LQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 362 ~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
--+.+-+.| ..+.++.+.-. -+|. ++..++..|+|.++.-.--...+.|.++++.+.+..+
T Consensus 157 e~~~ir~~~-~~~~~i~v~gG--------I~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 157 DLNKVKKLI-EMGFRVSVTGG--------LSVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHHHH-HHTCEEEEESS--------CCGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhh-cCCceEEEECC--------CCHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 112222223 33555444321 1222 2346788999999886444445679999887776554
No 185
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=63.94 E-value=50 Score=29.98 Aligned_cols=105 Identities=22% Similarity=0.265 Sum_probs=61.9
Q ss_pred HhcCCcEEEEc--c--CCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhh-HHHHHHh-CCEEEEcCCCcccCCCCC
Q 010610 286 VDNKVDFYAVS--F--VKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPN-LHSIITA-SDGAMVARGDLGAELPIE 357 (506)
Q Consensus 286 l~~gvD~IalS--f--V~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveN-ldeIl~~-sDGImIaRGDLgvelg~e 357 (506)
+..|+|+|-+. | -...+.++++|+. ..+.++.+ |+. .+.+. +++..+. +|++.+. ++.
T Consensus 22 ~~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~--~~~~~~~~~~~~~Gad~v~v~--~~~------ 87 (211)
T 3f4w_A 22 VVDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIM--DGGHFESQLLFDAGADYVTVL--GVT------ 87 (211)
T ss_dssp HGGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEEC--SCHHHHHHHHHHTTCSEEEEE--TTS------
T ss_pred hhcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEec--cchHHHHHHHHhcCCCEEEEe--CCC------
Confidence 34689998765 3 2234455555543 22345544 444 34444 5666665 8999983 332
Q ss_pred cHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 358 EVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.....+.+++.|+++|+++++.. + ++ .|. ...+..+...|+|.+.+.
T Consensus 88 -~~~~~~~~~~~~~~~g~~~~v~~--~-----~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 -DVLTIQSCIRAAKEAGKQVVVDM--I-----CV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp -CHHHHHHHHHHHHHHTCEEEEEC--T-----TC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred -ChhHHHHHHHHHHHcCCeEEEEe--c-----CC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 12344788999999999988641 1 11 121 123556788899998764
No 186
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=63.47 E-value=18 Score=34.46 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=41.0
Q ss_pred HHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 363 QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 363 Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
-...++.++++|++|.+.|- .+ .+ -+..+...++..|+|+|+- +||..+.+.+.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv------~~-~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP------WI-FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC------TT-CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeC------CC-CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36789999999999999982 00 00 1223456678889999875 699999999888774
No 187
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=63.03 E-value=63 Score=32.78 Aligned_cols=124 Identities=13% Similarity=0.092 Sum_probs=65.9
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEE-------------ccCCCHHH------------HHHHHHHHH-hcCCCc
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAV-------------SFVKDAQV------------VHELKNYLK-SCGADI 318 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~Ial-------------SfV~saed------------V~~lr~~l~-~~~~~i 318 (506)
.||..|++.+ +.+.+.|+|+|=+ |..+...| +.++.+.++ ..+.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD- 228 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-
Confidence 5777777665 3457899999987 33332222 222222222 23545
Q ss_pred eEEEecCCh---h-------hhhhHHHHHHh-----CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehh
Q 010610 319 HVIVKIESA---D-------SIPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNM 383 (506)
Q Consensus 319 ~IIaKIEt~---~-------aveNldeIl~~-----sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqm 383 (506)
.|..||--- . .++..-++++. +|.|-+..+...-. +...+ ..+-...+..++||+....
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~----~~~~~v~~~~~iPvi~~Gg- 302 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYSE----AFRQKVRERFHGVIIGAGA- 302 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCH----HHHHHHHHHCCSEEEEESS-
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-CcccH----HHHHHHHHHCCCCEEEECC-
Confidence 677777432 1 22232223332 68888875533111 11111 1122233456889887643
Q ss_pred hhhhhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 384 LESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 384 LeSMi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
. |. .+...++..| +|+||+.
T Consensus 303 --------i-t~---~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 303 --------Y-TA---EKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp --------C-CH---HHHHHHHHTTSCSEEEES
T ss_pred --------c-CH---HHHHHHHHCCCccEEEEC
Confidence 2 32 3456788888 9999985
No 188
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=63.02 E-value=32 Score=31.01 Aligned_cols=60 Identities=18% Similarity=0.255 Sum_probs=43.7
Q ss_pred EecCCCEEEEEEec--CC---CCceEEEeccchhhh--hcCCCCEEEEe--CCe-EEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQR--GV---GSAECVSVNYDDFVN--DVEVGDMLLVD--GGM-MSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~---~~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~-i~l~V~~~~~~~v~~ 248 (506)
-++.|++++|+... .. +.+....++...|.. .+++|+.+.++ +|. +..+|++++++.+..
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 115 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTV 115 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 47899999998863 22 334456677777764 68999999997 565 467899999887653
No 189
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=62.98 E-value=80 Score=28.72 Aligned_cols=87 Identities=10% Similarity=0.170 Sum_probs=54.6
Q ss_pred HHhHhhHhcCCcEEE-----EccCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 280 DDIKFGVDNKVDFYA-----VSFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 280 ~dI~~al~~gvD~Ia-----lSfV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGD 349 (506)
++++.+.+.|+|++- -+|++. .+.++++++.+ +..+.+-.++.+++- .++...+. +|++.+.-+.
T Consensus 20 ~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~--~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 20 SELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS---KLVFDCHLMVVDPER--YVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp HHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSSGGG--GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC---CCCEEEEEeecCHHH--HHHHHHHcCCCEEEEccCc
Confidence 456677788999843 255666 56666666543 345667778887742 35555555 8999885211
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
+ +.. ...++.+++.|+.++++.
T Consensus 95 -----~-~~~----~~~~~~~~~~g~~i~~~~ 116 (220)
T 2fli_A 95 -----T-RHI----HGALQKIKAAGMKAGVVI 116 (220)
T ss_dssp -----C-SCH----HHHHHHHHHTTSEEEEEE
T ss_pred -----c-ccH----HHHHHHHHHcCCcEEEEE
Confidence 1 222 245666677899988874
No 190
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=62.93 E-value=36 Score=31.72 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=67.1
Q ss_pred CHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCCceE--EEe-------cCCh-------hhhhhHHHHHHh
Q 010610 278 DWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHV--IVK-------IESA-------DSIPNLHSIITA 339 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~i~I--IaK-------IEt~-------~aveNldeIl~~ 339 (506)
+.++++.+++.|+|+|.+.. ..+++.+.++.+.+ +..+.+ =++ +.+. ..++.++...+.
T Consensus 85 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 85 DDESLAAALATGCARVNVGTAALENPQWCARVIGEH---GDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH---GGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHc---CCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 45678888999999998764 34555555554444 322221 112 2222 234555555555
Q ss_pred -CCEEEEcCCCcccCC-CCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh---CcceeEe
Q 010610 340 -SDGAMVARGDLGAEL-PIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE---GADAVML 414 (506)
Q Consensus 340 -sDGImIaRGDLgvel-g~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d---G~D~vmL 414 (506)
+|.|++-..+..-.. |+ .+..+ +++ ++..+.|++.... .-+. .|+..+... |+|++|+
T Consensus 162 G~~~i~~~~~~~~~~~~g~-~~~~~-~~l---~~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGP-NLDLL-AGV---ADRTDAPVIASGG---------VSSL---DDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp TCCCEEEEETTTTTTTSCC-CHHHH-HHH---HTTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEEEEE
T ss_pred CCCEEEEEecCCccccCCC-CHHHH-HHH---HHhCCCCEEEECC---------CCCH---HHHHHHHhhccCCCCEEEE
Confidence 788887433332111 22 22222 222 2345889887642 2232 356666666 9999998
Q ss_pred eccccCCCC
Q 010610 415 SGETAHGKF 423 (506)
Q Consensus 415 s~ETA~G~y 423 (506)
..--..+++
T Consensus 225 G~al~~~~~ 233 (244)
T 2y88_A 225 GKALYARRF 233 (244)
T ss_dssp CHHHHTTSS
T ss_pred cHHHHCCCc
Confidence 633333443
No 191
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=62.62 E-value=42 Score=33.80 Aligned_cols=131 Identities=13% Similarity=0.200 Sum_probs=67.6
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEccCC-------------CH------------HHHHHHHHHH-HhcCCCc
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVSFVK-------------DA------------QVVHELKNYL-KSCGADI 318 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalSfV~-------------sa------------edV~~lr~~l-~~~~~~i 318 (506)
.||..|++.+ +.+.+.|+|+|=+-.-. .. .-+.++.+.+ +..|.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 6788887776 35678999998764332 11 1122222222 2346677
Q ss_pred eEEEecCCh----------hhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHH-HcCCcEEEEehhhhh
Q 010610 319 HVIVKIESA----------DSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCR-SMGKAVIVATNMLES 386 (506)
Q Consensus 319 ~IIaKIEt~----------~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~-~~GkPvivATqmLeS 386 (506)
.|..||--- +.++-+..+-+. +|.|-+.-|...-+.....-+..+-..++..+ ..++|++....+
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi--- 297 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLI--- 297 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSC---
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCC---
Confidence 788887532 122222222222 68888875543222110000011222233322 348898865321
Q ss_pred hhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 387 Mi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
-|. .+...++..| +|+|++.
T Consensus 298 ------~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 298 ------TTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEES
T ss_pred ------CCH---HHHHHHHHCCCceEEEec
Confidence 122 2355788888 9999985
No 192
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=62.56 E-value=17 Score=38.46 Aligned_cols=51 Identities=18% Similarity=0.295 Sum_probs=41.4
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHH
Q 010610 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 159 (506)
+..+.+.+|......+.++.++++|+++.=||++||+...+.++++.+|+.
T Consensus 243 rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 243 QLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 344566778776778999999999999999999999987767777777753
No 193
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=62.49 E-value=80 Score=29.26 Aligned_cols=91 Identities=4% Similarity=-0.056 Sum_probs=61.6
Q ss_pred HHHhHhhHhcCCcEEEEccC-----CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-----CCEEEEcCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFV-----KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDGAMVARG 348 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV-----~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-----sDGImIaRG 348 (506)
.+.++.+.+.|+|+|=+... .+.+++.++++.+++.|-.+..+.-- ..+.++.+...++. ++.|.+-+|
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 34567888999999987753 36889999999999888664433211 11445555555554 567776554
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
. ...+++...|+++|..+.+=+
T Consensus 112 -------~----~~l~~l~~~a~~~gv~l~lEn 133 (257)
T 3lmz_A 112 -------Y----ELLPYVDKKVKEYDFHYAIHL 133 (257)
T ss_dssp -------G----GGHHHHHHHHHHHTCEEEEEC
T ss_pred -------H----HHHHHHHHHHHHcCCEEEEec
Confidence 1 334678899999999877543
No 194
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=62.48 E-value=14 Score=39.25 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=42.0
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 108 r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
.+..+-+.+|...+..+.++.|+++|++++=||.+||......+.++.+|+
T Consensus 216 grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 216 GRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred CcceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 345566677887788999999999999999999999988777777776664
No 195
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=62.35 E-value=79 Score=31.58 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |..+.-..+...-..|++.+...+ . .-++.+...+++++....+..
T Consensus 90 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~-----~-~~~~~~~a~~l~~~~~~~~i~ 152 (346)
T 3l6b_A 90 ALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEP-----S-DESRENVAKRVTEETEGIMVH 152 (346)
T ss_dssp HHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECS-----S-HHHHHHHHHHHHHHHTCEECC
T ss_pred HHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECC-----C-HHHHHHHHHHHHHhcCCEEEC
Confidence 45567999999988762 221112235566678999766642 2 357777777776654322111
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcCc--eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT--SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a--~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
.|.+ ..........+.++.++++. .|++.+-+|.|.--+++ ..|.+.|+++-+
T Consensus 153 --~~~n------p~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~ 211 (346)
T 3l6b_A 153 --PNQE------PAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEP 211 (346)
T ss_dssp --SSSC------HHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred --CCCC------hHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence 0110 01112223334577777754 78888888887655544 489999999865
No 196
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=62.13 E-value=1.1e+02 Score=31.42 Aligned_cols=138 Identities=20% Similarity=0.235 Sum_probs=89.7
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec-CCh-hhhhhHHHHHHh-CCEEEEcCCCcccCCCC
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-ESA-DSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI-Et~-~aveNldeIl~~-sDGImIaRGDLgvelg~ 356 (506)
+.|+...+.|+|+|-++. .+.++.+.++.+-+. .+++++|-| -++ .|+. . ++. +|.+=|-||.+|-
T Consensus 50 ~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a-~e~G~dklRINPGNig~---- 118 (366)
T 3noy_A 50 NQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---S-MEKGVHGIRINPGNIGK---- 118 (366)
T ss_dssp HHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---H-HHTTCSEEEECHHHHSC----
T ss_pred HHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---H-HHhCCCeEEECCcccCc----
Confidence 334566689999998875 557777777665544 468999987 333 3332 2 233 8999999999873
Q ss_pred CcHHHHHHHHHHHHHHcCCcEEEE-------ehhhhhhhcCCCCChhh-----cccHHHHHHhCcceeEeeccccCCCCH
Q 010610 357 EEVPLLQEEIIRTCRSMGKAVIVA-------TNMLESMIVHPTPTRAE-----VSDIAIAVREGADAVMLSGETAHGKFP 424 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~GkPvivA-------TqmLeSMi~~~~PtRAE-----v~Dvanav~dG~D~vmLs~ETA~G~yP 424 (506)
..--++++.+|+++|+|+=+- ..+|+.+ ..||... +.-+.-+-..|+|-+++|- ...-+
T Consensus 119 ---~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~y---g~~~~eamVeSAl~~~~~~e~~gf~~iviS~---K~S~v 189 (366)
T 3noy_A 119 ---EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY---GYPSAEALAESALRWSEKFEKWGFTNYKVSI---KGSDV 189 (366)
T ss_dssp ---HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH---SSCCHHHHHHHHHHHHHHHHHTTCCCEEEEE---ECSSH
T ss_pred ---hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHhCCCCeEEEee---ecCCh
Confidence 223367999999999998764 3444433 2233222 1223345566999999984 44556
Q ss_pred HHHHHHHHHHHHH
Q 010610 425 LKAVKVMHTVSLR 437 (506)
Q Consensus 425 veaV~~m~~I~~~ 437 (506)
..+|+.-+.++++
T Consensus 190 ~~~i~ayr~la~~ 202 (366)
T 3noy_A 190 LQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 6777766666555
No 197
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=62.09 E-value=12 Score=38.33 Aligned_cols=45 Identities=27% Similarity=0.362 Sum_probs=35.6
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 112 IVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 112 Ii~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
+.+-+|... .+.++.++++|++++=||++||+.+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 445555433 899999999999999999999988777777666664
No 198
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=62.07 E-value=1.3e+02 Score=30.00 Aligned_cols=149 Identities=13% Similarity=0.042 Sum_probs=89.3
Q ss_pred CCccCHHHhH-hhHhcCCcEEEE-----ccCCC-------HHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh
Q 010610 274 ITEKDWDDIK-FGVDNKVDFYAV-----SFVKD-------AQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA 339 (506)
Q Consensus 274 ltekD~~dI~-~al~~gvD~Ial-----SfV~s-------aedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~ 339 (506)
++..++..|. ...+.|+|.|=+ ++..+ +.+.+.++.+.+ ...++++.+. .-+..-.+.++...+.
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHhC
Confidence 4555555554 445689999998 34332 345555555443 3345666655 2211123445555544
Q ss_pred -CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeecc
Q 010610 340 -SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGE 417 (506)
Q Consensus 340 -sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~E 417 (506)
+|++.|. ++..++ ...+..++.|+++|+.+...-. ..+.-+...+.+++. +...|+|.|-|. +
T Consensus 106 Gvd~v~I~-------~~~s~~-~~~~~~i~~ak~~G~~v~~~~~------~a~~~~~e~~~~ia~~~~~~Ga~~i~l~-D 170 (345)
T 1nvm_A 106 GARVVRVA-------THCTEA-DVSKQHIEYARNLGMDTVGFLM------MSHMIPAEKLAEQGKLMESYGATCIYMA-D 170 (345)
T ss_dssp TCCEEEEE-------EETTCG-GGGHHHHHHHHHHTCEEEEEEE------STTSSCHHHHHHHHHHHHHHTCSEEEEE-C
T ss_pred CcCEEEEE-------EeccHH-HHHHHHHHHHHHCCCEEEEEEE------eCCCCCHHHHHHHHHHHHHCCCCEEEEC-C
Confidence 7988874 233322 2346788899999999887621 112333344666666 455679999986 5
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 010610 418 TAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 418 TA~G~yPveaV~~m~~I~~~a 438 (506)
|.=...|-++-+.+..+.+..
T Consensus 171 T~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 171 SGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp TTCCCCHHHHHHHHHHHHHHS
T ss_pred CcCccCHHHHHHHHHHHHHhc
Confidence 554556988888888887665
No 199
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=62.06 E-value=48 Score=33.64 Aligned_cols=121 Identities=18% Similarity=0.213 Sum_probs=66.5
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEcc-------------CCCHH----------------HHHHHHHHHHhcC
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVSF-------------VKDAQ----------------VVHELKNYLKSCG 315 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalSf-------------V~sae----------------dV~~lr~~l~~~~ 315 (506)
.||..|++.+ +.+.+.|+|+|=+-. .+... -++.+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5777776655 345789999998833 22111 144444444 4
Q ss_pred CCceEEEecCCh---------hhhhhHHHHHHh-----CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 316 ADIHVIVKIESA---------DSIPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 316 ~~i~IIaKIEt~---------~aveNldeIl~~-----sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
.+ .|..||--- ..++...++++. +|+|-+..+.+.-. + ..+. ..+-...+..++|||...
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~--~~~~--~~~~~i~~~~~iPvi~~G 300 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA-P--DTPV--SFKRALREAYQGVLIYAG 300 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-C--CCCH--HHHHHHHHHCCSEEEEES
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC-C--CccH--HHHHHHHHHCCCcEEEeC
Confidence 45 677777431 123333333332 68888876643211 1 1111 112223345678988764
Q ss_pred hhhhhhhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 382 NMLESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 382 qmLeSMi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
. . |. .+...++..| +|+|++.
T Consensus 301 g---------i-~~---~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 301 R---------Y-NA---EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp S---------C-CH---HHHHHHHHTTSCSEEECC
T ss_pred C---------C-CH---HHHHHHHHCCCcceehhc
Confidence 3 2 32 3466788888 9999985
No 200
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=61.75 E-value=48 Score=32.56 Aligned_cols=90 Identities=16% Similarity=0.284 Sum_probs=53.1
Q ss_pred HHHhHhhHhcCCcEE--EEcc---------CCCHH-----------HHHHHHHHHHhcCCCceEEEe-cCCh---hhhhh
Q 010610 279 WDDIKFGVDNKVDFY--AVSF---------VKDAQ-----------VVHELKNYLKSCGADIHVIVK-IESA---DSIPN 332 (506)
Q Consensus 279 ~~dI~~al~~gvD~I--alSf---------V~sae-----------dV~~lr~~l~~~~~~i~IIaK-IEt~---~aveN 332 (506)
.+.++...+.|+|+| .+|| ++.+. ++-++.+-+++.+.+++++.+ -.++ -|+++
T Consensus 37 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~ 116 (271)
T 3nav_A 37 LAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDD 116 (271)
T ss_dssp HHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHH
Confidence 445555667899985 7778 44322 112222233333456677665 2222 35665
Q ss_pred HHHHHH-h-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEE
Q 010610 333 LHSIIT-A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI 378 (506)
Q Consensus 333 ldeIl~-~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvi 378 (506)
+-+-+. + +||+++. ++|+++ .......|+++|...+
T Consensus 117 f~~~~~~aGvdGvIip------Dlp~ee----~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 117 FYQRCQKAGVDSVLIA------DVPTNE----SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp HHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHCCCCEEEEC------CCCHHH----HHHHHHHHHHcCCeEE
Confidence 544443 3 8999994 556655 5678899999998755
No 201
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=61.71 E-value=21 Score=35.15 Aligned_cols=97 Identities=11% Similarity=0.033 Sum_probs=55.5
Q ss_pred HHhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecCC---hhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIES---ADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIEt---~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. +.-|. |..+-++...+..+.+++||+-+=+ .++++.....-+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34467889999999862 33344 4444444455555668899998754 5555555444433 799998754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.- .+.+.+.. ..-.-|.+.+.|+++.
T Consensus 106 ~y~~-~s~~~l~~---~f~~ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR-PSQEGLYQ---HFKAIAEHTDLPQILY 133 (292)
T ss_dssp CSSC-CCHHHHHH---HHHHHHTTCSSCEEEE
T ss_pred CCCC-CCHHHHHH---HHHHHHHhcCCCEEEE
Confidence 3311 11122222 2223344557787764
No 202
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=61.68 E-value=66 Score=31.81 Aligned_cols=118 Identities=14% Similarity=0.032 Sum_probs=71.2
Q ss_pred HHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhcccc
Q 010610 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (506)
Q Consensus 364 k~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~ 443 (506)
.-+...|+..|.++.+.. |..+....+...-..|++.+...++ +.| -++++...+++++-...++
T Consensus 86 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~l~~~~~~~~~ 150 (325)
T 3dwg_A 86 ISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GGS-NTAVATAKELAATNPSWVM 150 (325)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TTH-HHHHHHHHHHHHHCTTSBC
T ss_pred HHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCeEe
Confidence 456778899999988762 2222222355666789998777532 223 4677766666544332211
Q ss_pred CCCCCCCCCcCcCCChHH---HHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 444 GGAMPPNLGQAFKNHMSE---MFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~---~ia~~av~~A~~~~-a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
.. .|. ++.. -....+.++.++++ . .||+.+-+|.|.--+++ +.|.+.|+++.+
T Consensus 151 ~~-~~~--------np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~ 212 (325)
T 3dwg_A 151 LY-QYG--------NPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP 212 (325)
T ss_dssp CC-TTT--------CHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEE
T ss_pred CC-CCC--------CHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEee
Confidence 11 111 2211 22334567777776 4 88999989988655554 489999999875
No 203
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=61.59 E-value=30 Score=33.81 Aligned_cols=141 Identities=10% Similarity=0.057 Sum_probs=72.5
Q ss_pred hHhhHhcCCc---EEEEccC-----------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh------CC
Q 010610 282 IKFGVDNKVD---FYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA------SD 341 (506)
Q Consensus 282 I~~al~~gvD---~IalSfV-----------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~------sD 341 (506)
.+.+.+.|+| +|-+.|- .+.+.+.++-+.+++. .+.+|+.|+=.--..+++.++++. +|
T Consensus 112 a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d 190 (314)
T 2e6f_A 112 VRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVK 190 (314)
T ss_dssp HHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHhcCCce
Confidence 3455677899 8888663 2455444444444332 146899997432222344444432 67
Q ss_pred EEEEcCCC---cccC-------C----------CCCcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhccc
Q 010610 342 GAMVARGD---LGAE-------L----------PIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSD 400 (506)
Q Consensus 342 GImIaRGD---Lgve-------l----------g~e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~D 400 (506)
+|.+.-.. +.++ + |....+.....+-+..+.. +.|+|....+ -| ..|
T Consensus 191 ~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI---------~~---~~d 258 (314)
T 2e6f_A 191 FVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGV---------YS---GED 258 (314)
T ss_dssp EEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSC---------CS---HHH
T ss_pred EEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCC---------CC---HHH
Confidence 77654211 0011 0 1111233333333333444 7898876432 22 346
Q ss_pred HHHHHHhCcceeEeeccccC-CCCHHHHHHHHHHHHHHHhcc
Q 010610 401 IAIAVREGADAVMLSGETAH-GKFPLKAVKVMHTVSLRTEAT 441 (506)
Q Consensus 401 vanav~dG~D~vmLs~ETA~-G~yPveaV~~m~~I~~~aE~~ 441 (506)
+..++..|+|+|++..---. |. .+..+|....+..
T Consensus 259 a~~~l~~GAd~V~ig~~~l~~~p------~~~~~i~~~l~~~ 294 (314)
T 2e6f_A 259 AFLHILAGASMVQVGTALQEEGP------GIFTRLEDELLEI 294 (314)
T ss_dssp HHHHHHHTCSSEEECHHHHHHCT------THHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEchhhHhcCc------HHHHHHHHHHHHH
Confidence 88888999999998643332 33 2445555555443
No 204
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=61.44 E-value=36 Score=31.19 Aligned_cols=60 Identities=22% Similarity=0.442 Sum_probs=44.8
Q ss_pred EecCCCEEEEEEec--CCC---CceEEEeccchhhh--hcCCCCEEEEe--CC-eEEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN--DVEVGDMLLVD--GG-MMSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG-~i~l~V~~~~~~~v~~ 248 (506)
-++.|++.+|++.. .+| .+....++...|.. .+++|+.+.+. || .+...|++++++.|+.
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 47899999998873 233 34466777777765 47999999996 45 4788999999987654
No 205
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=61.13 E-value=74 Score=30.86 Aligned_cols=116 Identities=14% Similarity=0.091 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |.......+...-..|++.+...++. .| -++++...+++.+ +..++.
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~---~~-~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER---RM-LAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT---HH-HHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHhc-CCCEeC
Confidence 35677899999988763 21112223556667799987765321 13 4677776666655 322211
Q ss_pred CCCCCCCCcCcCCChHHHH---HHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMF---AYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~i---a~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
. .|. ++.... ...+.++.++++ . .||+.+-+|.|+--+++ +.|...|+++.+
T Consensus 140 ~-~~~--------n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~ 201 (304)
T 1ve1_A 140 D-QFK--------NPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEP 201 (304)
T ss_dssp C-TTT--------CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred C-CCC--------ChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEec
Confidence 1 111 222222 234567778775 4 89999999998766665 468899999875
No 206
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=61.00 E-value=1.2e+02 Score=29.95 Aligned_cols=124 Identities=18% Similarity=0.098 Sum_probs=68.8
Q ss_pred cccCCCccCCCCCCccCHHHhHhhHhcCC-cEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec--CChhhhhhHHHHHH
Q 010610 262 LNVRGKSATLPSITEKDWDDIKFGVDNKV-DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI--ESADSIPNLHSIIT 338 (506)
Q Consensus 262 Vnlp~~~~~lp~ltekD~~dI~~al~~gv-D~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI--Et~~aveNldeIl~ 338 (506)
+..|=..-++..++ +.+....+.+.|. .+|...++ +++.+.+..+.+++.-. .++.+.+ -++.--+.++...+
T Consensus 11 ~~~Pii~apM~g~s--~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~-~p~gvnl~~~~~~~~~~~~~a~~ 86 (332)
T 2z6i_A 11 IDYPIFQGGMAWVA--DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTD-KPFGVNIMLLSPFVEDIVDLVIE 86 (332)
T ss_dssp CSSSEEECCCTTTC--CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCC-SCEEEEECTTSTTHHHHHHHHHH
T ss_pred CCCCEEeCCCCCCC--cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHHHHH
Confidence 44443334555544 5666667777786 66666665 56665544343433222 1222322 23332223333433
Q ss_pred h-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 339 ~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
. +|+|.++-|. | ..+++.+++.|.|++.-. .+. .++..+...|+|++.+++
T Consensus 87 ~g~d~V~~~~g~-----p--------~~~i~~l~~~g~~v~~~v-----------~~~---~~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 87 EGVKVVTTGAGN-----P--------SKYMERFHEAGIIVIPVV-----------PSV---ALAKRMEKIGADAVIAEG 138 (332)
T ss_dssp TTCSEEEECSSC-----G--------GGTHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEEC
T ss_pred CCCCEEEECCCC-----h--------HHHHHHHHHcCCeEEEEe-----------CCH---HHHHHHHHcCCCEEEEEC
Confidence 3 7999987542 2 235677778899998643 122 234457778999999965
No 207
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=60.71 E-value=14 Score=37.83 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=40.4
Q ss_pred CHHHhHhhHhcCCcEEEEcc---------CCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEE
Q 010610 278 DWDDIKFGVDNKVDFYAVSF---------VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAM 344 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf---------V~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGIm 344 (506)
..++.+.+.+.|+|+|.+|- .-+.+-+.++++.+ +.++.||+- -||.+-.+++++ +|++|
T Consensus 239 ~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v---~~~ipVia~----GGI~~g~D~~kalalGAd~V~ 311 (368)
T 2nli_A 239 HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV---NKRVPIVFD----SGVRRGEHVAKALASGADVVA 311 (368)
T ss_dssp SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH---TTSSCEEEC----SSCCSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh---CCCCeEEEE----CCCCCHHHHHHHHHcCCCEEE
Confidence 35778888999999999964 12233444444443 446788872 344444444443 89999
Q ss_pred EcC
Q 010610 345 VAR 347 (506)
Q Consensus 345 IaR 347 (506)
|||
T Consensus 312 iGr 314 (368)
T 2nli_A 312 LGR 314 (368)
T ss_dssp ECH
T ss_pred ECH
Confidence 998
No 208
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=60.63 E-value=97 Score=30.76 Aligned_cols=116 Identities=13% Similarity=0.108 Sum_probs=70.2
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |.......+...-..|++.+...+ .| -++++...+++++- ..++.
T Consensus 102 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~l~~~~-~~~~~ 163 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVVM-----------PKGAPKSKVAATCDYSAEVVLHGD-----NF-NDTIAKVSEIVETE-GRIFI 163 (342)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTSCHHHHHHHHHHSCEEEECCS-----SH-HHHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhc-CCEEe
Confidence 45678889999998762 222222345566778998765432 23 46777766666542 22111
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~-a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
. .|.+ ..........+.++.++++ . .||+.+-+|.|.--+++ +.|...|+++.+
T Consensus 164 ~-~~~n------~~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 223 (342)
T 2gn0_A 164 P-PYDD------PKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQA 223 (342)
T ss_dssp C-SSSS------HHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred C-CCCC------HHHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEe
Confidence 1 1111 0112223334667788876 4 89999999998665554 579999999875
No 209
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=60.49 E-value=21 Score=35.71 Aligned_cols=54 Identities=24% Similarity=0.434 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHhCCcEEEEeCCCCCh----------HHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 121 NTREMIWKLAEAGMNVARLNMSHGDH----------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 121 ~~~e~i~~li~aGm~v~RiN~SHg~~----------e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
.+++.|+.|-+.|+|++||-++.... +...+.++.+=+...+.| +.+++|+-.-
T Consensus 43 ~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G---i~vildlH~~ 106 (345)
T 3ndz_A 43 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND---MYVIINLHHE 106 (345)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEECCCSC
T ss_pred CcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEecCCc
Confidence 36899999999999999999885421 222333333333344444 7889998664
No 210
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=60.19 E-value=8.3 Score=36.30 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=43.5
Q ss_pred EecCCCEEEEEEecC--C---CCceEEEeccchhhh--hcCCCCEEEEe--CCeEEEEEEEEeCCeEE
Q 010610 189 TLTSGQEFTFTIQRG--V---GSAECVSVNYDDFVN--DVEVGDMLLVD--GGMMSLLVKSKTEDSVK 247 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~~--~---~~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~i~l~V~~~~~~~v~ 247 (506)
-++.|++++|++... + ..+....++...|.. .+++|+.+.+. +|.+..+|++++++.|+
T Consensus 51 Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 478999999998732 2 233456677777764 58999999997 56677778888888765
No 211
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=60.07 E-value=27 Score=34.55 Aligned_cols=68 Identities=21% Similarity=0.296 Sum_probs=50.6
Q ss_pred CceEEEecCCCCC---------C----HHHHHHHHHhCCcEEEEeC-CC--C-----ChHHHHHHHHHHHHHHHhcCCce
Q 010610 109 KTKIVCTIGPSTN---------T----REMIWKLAEAGMNVARLNM-SH--G-----DHASHQKVIDLVKEYNAQSKDNV 167 (506)
Q Consensus 109 ~tKIi~TiGPss~---------~----~e~i~~li~aGm~v~RiN~-SH--g-----~~e~~~~~i~~ir~~~~~~~~~~ 167 (506)
+++|++=|.+.-+ + .+..++|+++|.++.=+|. |- | ..|++.+++..++.+.++++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--- 90 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--- 90 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC---
Confidence 5788888765432 1 3356789999999999999 53 2 15889889999988877655
Q ss_pred EEEEeecCCCee
Q 010610 168 IAIMLDTKGPEV 179 (506)
Q Consensus 168 i~Il~DL~GPkI 179 (506)
+.|.+|+.-|++
T Consensus 91 ~piSIDT~~~~v 102 (282)
T 1aj0_A 91 VWISVDTSKPEV 102 (282)
T ss_dssp CEEEEECCCHHH
T ss_pred CeEEEeCCCHHH
Confidence 668889877753
No 212
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=60.07 E-value=1.7e+02 Score=30.57 Aligned_cols=153 Identities=13% Similarity=0.127 Sum_probs=90.8
Q ss_pred CCccCHHHhH-hhHhcCCcEEEEcc-CCCHHHHHHHHHHHHhcCCCceEEEec-CChhhhhhHHHHHHh-CC--EEEEcC
Q 010610 274 ITEKDWDDIK-FGVDNKVDFYAVSF-VKDAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNLHSIITA-SD--GAMVAR 347 (506)
Q Consensus 274 ltekD~~dI~-~al~~gvD~IalSf-V~saedV~~lr~~l~~~~~~i~IIaKI-Et~~aveNldeIl~~-sD--GImIaR 347 (506)
++..++..|. ...+.|+|.|=+.| ..++.|...++.+. +.+....+.+.+ .+.++ ++..++. .| .++++-
T Consensus 58 ~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~~A~~aG~~~V~i~~s~ 133 (423)
T 3ivs_A 58 FDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDD---ARVAVETGVDGVDVVIGT 133 (423)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HHHHHHTTCSEEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhh---HHHHHHcCCCEEEEEeec
Confidence 4455655554 45568999998854 56677777676554 345555555421 23333 2333332 45 445555
Q ss_pred CCccc----CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccccCCC
Q 010610 348 GDLGA----ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGK 422 (506)
Q Consensus 348 GDLgv----elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ETA~G~ 422 (506)
.|+-. ....+++.....++++.|+++|..|.+... +. .+-+...+.+++. +...|+|.+.|. +|.=.-
T Consensus 134 Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--da----~r~d~~~~~~v~~~~~~~Ga~~i~l~-DTvG~~ 206 (423)
T 3ivs_A 134 SQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--DS----FRSDLVDLLSLYKAVDKIGVNRVGIA-DTVGCA 206 (423)
T ss_dssp -------------CHHHHHHHHHHHHHHTTTCEEEEEEE--SG----GGSCHHHHHHHHHHHHHHCCSEEEEE-ETTSCC
T ss_pred cHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--cC----cCCCHHHHHHHHHHHHHhCCCccccC-CccCcC
Confidence 55432 233456777778899999999999987632 11 1122233445555 456799999884 888888
Q ss_pred CHHHHHHHHHHHHHH
Q 010610 423 FPLKAVKVMHTVSLR 437 (506)
Q Consensus 423 yPveaV~~m~~I~~~ 437 (506)
.|.+.-+.+..+...
T Consensus 207 ~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 207 TPRQVYDLIRTLRGV 221 (423)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999888877777654
No 213
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=60.04 E-value=57 Score=34.14 Aligned_cols=140 Identities=13% Similarity=0.101 Sum_probs=75.6
Q ss_pred HhcCCcEEEEcc----------CCCHHHHHHHHHHHHhc-------------------CCCce-EEEecCChhhhhhHHH
Q 010610 286 VDNKVDFYAVSF----------VKDAQVVHELKNYLKSC-------------------GADIH-VIVKIESADSIPNLHS 335 (506)
Q Consensus 286 l~~gvD~IalSf----------V~saedV~~lr~~l~~~-------------------~~~i~-IIaKIEt~~aveNlde 335 (506)
+...+|+|-+.+ -++++.+.++-+.+.+. ..+.+ |++||=---.-+++.+
T Consensus 208 l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~ 287 (415)
T 3i65_A 208 IGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKE 287 (415)
T ss_dssp HGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHH
T ss_pred HHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHH
Confidence 444489987653 35555555554444332 12566 8999953222335666
Q ss_pred HHHh-----CCEEEEcCC-----Cc---ccCCC----CCcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChh
Q 010610 336 IITA-----SDGAMVARG-----DL---GAELP----IEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRA 396 (506)
Q Consensus 336 Il~~-----sDGImIaRG-----DL---gvelg----~e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRA 396 (506)
|++. +|||.+--. |+ ..+.| ....+...+.|-+..++. .+|+|....+- |
T Consensus 288 iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~---------s-- 356 (415)
T 3i65_A 288 IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF---------S-- 356 (415)
T ss_dssp HHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC---------S--
T ss_pred HHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC---------C--
Confidence 6654 799987621 21 11111 112344444444445555 48988764322 2
Q ss_pred hcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccc
Q 010610 397 EVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATI 442 (506)
Q Consensus 397 Ev~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~ 442 (506)
..|+..++..|+|+|++..-- +.+=| .++.+|.++.+..+
T Consensus 357 -~eDa~e~l~aGAd~VqIgra~-l~~GP----~~~~~i~~~L~~~l 396 (415)
T 3i65_A 357 -GLDALEKIEAGASVCQLYSCL-VFNGM----KSAVQIKRELNHLL 396 (415)
T ss_dssp -HHHHHHHHHHTEEEEEESHHH-HHHGG----GHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcCCCEEEEcHHH-HhcCH----HHHHHHHHHHHHHH
Confidence 357889999999999985211 10102 24556666666544
No 214
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=60.00 E-value=37 Score=31.34 Aligned_cols=86 Identities=19% Similarity=0.235 Sum_probs=52.7
Q ss_pred CHHHhHhhHhcCCcEEEEccCCC--------HHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEc
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKD--------AQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVA 346 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~s--------aedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIa 346 (506)
+.++++.+.+.|+|+|.++.+-. +.+...++++.+.. ++++++ -| |+ +|+.+.++. +||+.++
T Consensus 119 t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~---~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 119 SLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TP---DRLRDVKQAGADGIAVM 192 (221)
T ss_dssp SHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CG---GGHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CH---HHHHHHHHcCCCEEEEh
Confidence 34567778889999999976521 22455555554433 344544 56 54 677888777 8999999
Q ss_pred CCCcccCCCCCcHHHHHHHHHHHHHHc
Q 010610 347 RGDLGAELPIEEVPLLQEEIIRTCRSM 373 (506)
Q Consensus 347 RGDLgvelg~e~V~~~Qk~II~~c~~~ 373 (506)
++=+.. ++....-+.+.+..++.
T Consensus 193 s~i~~~----~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 193 SGIFSS----AEPLEAARRYSRKLKEM 215 (221)
T ss_dssp HHHHTS----SSHHHHHHHHHHHHHHH
T ss_pred HHhhCC----CCHHHHHHHHHHHHHHh
Confidence 764432 23444445555555443
No 215
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=59.95 E-value=41 Score=29.88 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=43.7
Q ss_pred EecCCCEEEEEEec--CC---CCceEEEeccchhh-hhcCCCCEEEEe--CCe-EEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQR--GV---GSAECVSVNYDDFV-NDVEVGDMLLVD--GGM-MSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~---~~~~~i~v~~~~l~-~~v~~Gd~IliD--DG~-i~l~V~~~~~~~v~~ 248 (506)
-++.|++++|+... .. +.+....++...|. ..+++|+.+.+. ||. +...|++++++.|..
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 46899999998863 22 33445667777773 368999999987 575 778899999888653
No 216
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=59.33 E-value=13 Score=37.23 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=46.7
Q ss_pred CHHHhHhhHhcCCcEEEEccCC-----C-HH--------HHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHhCC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVK-----D-AQ--------VVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASD 341 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~-----s-ae--------dV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~sD 341 (506)
+.++.+.+.+.|+|+|.++.-- + .. .+..+.+..... +++||+ -|-+..-+ +..+..=+|
T Consensus 159 s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv--~kalalGAd 234 (336)
T 1ypf_A 159 TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDV--AKSIRFGAT 234 (336)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHH--HHHHHTTCS
T ss_pred CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHH--HHHHHcCCC
Confidence 3578888999999999995321 0 00 344444444332 688888 67776544 233333389
Q ss_pred EEEEcCCCcccC
Q 010610 342 GAMVARGDLGAE 353 (506)
Q Consensus 342 GImIaRGDLgve 353 (506)
++|+||.=|+.+
T Consensus 235 aV~iGr~~l~t~ 246 (336)
T 1ypf_A 235 MVMIGSLFAGHE 246 (336)
T ss_dssp EEEESGGGTTCT
T ss_pred EEEeChhhhccc
Confidence 999999998643
No 217
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=59.23 E-value=14 Score=37.64 Aligned_cols=67 Identities=15% Similarity=0.276 Sum_probs=40.5
Q ss_pred HHHhHhhHhcCCcEEEEccCCC------HHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHhCCEEEEcC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKD------AQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDGAMVAR 347 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~s------aedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~sDGImIaR 347 (506)
.++++.+.+.|+|+|.++---. ..++..+.+..+..+.++.||+ -|-+.+-+ ...+..-+|+++|||
T Consensus 236 ~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~--~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 236 AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDV--FKALALGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHH--HHHHHHTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHH--HHHHHcCCCEEeecH
Confidence 5778889999999999964211 1244444444433444677877 45554322 122222389999998
No 218
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=58.86 E-value=80 Score=32.74 Aligned_cols=60 Identities=17% Similarity=0.259 Sum_probs=43.9
Q ss_pred eEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 319 HVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 319 ~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
.+..-||-..-.-+|++.++-+|-|+-|-|=|=-+--..++|. .+.+.|+++|+|||.-+
T Consensus 267 ~l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~---gVa~~A~~~~vPviaia 326 (383)
T 3cwc_A 267 QLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIGIA 326 (383)
T ss_dssp EEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEEEE
T ss_pred EEccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHH---HHHHHHHHhCCCEEEEe
Confidence 4666677777777999999999999999776655555556664 56678999999998654
No 219
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=58.57 E-value=17 Score=37.64 Aligned_cols=67 Identities=15% Similarity=0.197 Sum_probs=42.1
Q ss_pred CHHHhHhhHhcCCcEEEEccCC------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEEEcC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVAR 347 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~------saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGImIaR 347 (506)
+.++.+.+.+.|+|+|.+|--- ....+..+.+..+..+.++.||+- -||.+-.+++++ +|++||||
T Consensus 262 ~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 262 RGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp CHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECH
Confidence 3677888999999999996321 122344444433333456888872 344444454444 89999998
Q ss_pred C
Q 010610 348 G 348 (506)
Q Consensus 348 G 348 (506)
.
T Consensus 338 ~ 338 (392)
T 2nzl_A 338 P 338 (392)
T ss_dssp H
T ss_pred H
Confidence 3
No 220
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=58.12 E-value=39 Score=33.43 Aligned_cols=82 Identities=28% Similarity=0.345 Sum_probs=55.7
Q ss_pred CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeecccc
Q 010610 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETA 419 (506)
Q Consensus 340 sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA 419 (506)
+|.+|.-....|.-.|+.. +...+.|.+ ..+.|||+... +-|. +|++.++..|+|+|++..=-+
T Consensus 157 ~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eGG---------I~TP---sDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 157 CIAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDAG---------VGTA---SDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp CSEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCSH---HHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHHh
Confidence 5777763333444455555 344455554 46899998753 3333 479999999999999986666
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 010610 420 HGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 420 ~G~yPveaV~~m~~I~~~ 437 (506)
.++.|.+-.+.|..-++.
T Consensus 221 ~a~dP~~ma~af~~Av~a 238 (265)
T 1wv2_A 221 HAKDPVMMAEAMKHAIVA 238 (265)
T ss_dssp TSSSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 789998888777765543
No 221
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=58.12 E-value=54 Score=34.71 Aligned_cols=123 Identities=18% Similarity=0.137 Sum_probs=71.6
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |..+....+...-..|++.+....+.... .+..+++...+++++....++.
T Consensus 127 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVM-----------PEKMSNEKVSALRTLGAKIIRTPTEAAYD-SPEGLIYVAQQLQRETPNSIVL 194 (527)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTTSCTT-STTSHHHHHHHHHHHSSSEECC
T ss_pred HHHHHHHHhCCeEEEEE-----------cCCCCHHHHHHHHHCCCEEEEeCCCCCcc-cHHHHHHHHHHHHHhCCCcEec
Confidence 45568899999988762 33222334556677899987775432111 1334555556665544333221
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
. .|.+ +.++..-....+.++.++++ . .||+.+-+|.|.--+++ ..|.+.|+++.+
T Consensus 195 ~-~~~n-----~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~ 256 (527)
T 3pc3_A 195 D-QYRN-----AGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDP 256 (527)
T ss_dssp C-TTTC-----THHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred C-CCCC-----cchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence 1 1111 00122222334567777775 4 78999888888766555 489999999875
No 222
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.05 E-value=53 Score=31.25 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=63.4
Q ss_pred hHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCE-EEEcC-CC-cccCCCCCcHHH
Q 010610 285 GVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDG-AMVAR-GD-LGAELPIEEVPL 361 (506)
Q Consensus 285 al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDG-ImIaR-GD-Lgvelg~e~V~~ 361 (506)
+.+.|+|+|.++-... +++.++.+.++++|-+..+...-.+ ..+.+.++.+..+| +.+.. +. -|..-+.. +.
T Consensus 114 a~~aGadgv~v~d~~~-~~~~~~~~~~~~~g~~~i~~~a~~t--~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLPY-VAAHSLWSEAKNNNLELVLLTTPAI--PEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTCBT-TTHHHHHHHHHHTTCEECEEECTTS--CHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCCCh-hhHHHHHHHHHHcCCceEEEECCCC--CHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 7789999999875443 4577777777777655333333333 35567777777664 33332 11 12211221 22
Q ss_pred HHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 362 LQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 362 ~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..+.+-+..+..+.|+++... .=|. .++..+...|+|++...
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGG---------I~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFG---------ISKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 222222223344789887642 2222 24666777899999864
No 223
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=57.73 E-value=38 Score=31.80 Aligned_cols=132 Identities=17% Similarity=0.204 Sum_probs=67.4
Q ss_pred hHhhHhcCCcEEEEccC---CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCc-ccCCCC-
Q 010610 282 IKFGVDNKVDFYAVSFV---KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDL-GAELPI- 356 (506)
Q Consensus 282 I~~al~~gvD~IalSfV---~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDL-gvelg~- 356 (506)
+..+.+.|+|+|.+..- ...+++.++.+...+.|-. +|.-+-+.+-.+.+.++ -.+-|-+.+.++ | .|.
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~--~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~ 148 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLE--TIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIP 148 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCE--EEEEESSSHHHHHHTTT--CCSEEEECCCC---------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCC
Confidence 35667899999999885 4445666666666665544 33333222222222222 135565667666 2 120
Q ss_pred --CcHHH-HHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHH
Q 010610 357 --EEVPL-LQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (506)
Q Consensus 357 --e~V~~-~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m 431 (506)
..-+. ++ .+.+..++. +.|++... ..=+. .++..+...|+|+++.-+-.-.-.-|.+.++-|
T Consensus 149 ~~t~~~~~~~-~~~~~ir~~~~~~~ii~gg---------GI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 149 VSKANPEVVE-GTVRAVKEINKDVKVLCGA---------GISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp -------CSH-HHHHHHHHHCTTCEEEECS---------SCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred CccCCHHHHH-HHHHHHHhccCCCeEEEEe---------CcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 00011 22 333333433 56776542 22222 245556778999998754333345677776655
Q ss_pred H
Q 010610 432 H 432 (506)
Q Consensus 432 ~ 432 (506)
.
T Consensus 216 ~ 216 (219)
T 2h6r_A 216 I 216 (219)
T ss_dssp C
T ss_pred H
Confidence 3
No 224
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=57.25 E-value=33 Score=34.25 Aligned_cols=145 Identities=17% Similarity=0.120 Sum_probs=83.4
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHH-------Hh-CCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII-------TA-SDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl-------~~-sDG 342 (506)
|.-|+.|.+.+ +.+.+.|+..|+++ +..|..+++.|+ +..++|.+=|==|.|-...+.-+ +. +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66677776654 67888999999986 667888888884 44566665565444433332222 11 454
Q ss_pred EEEcCCCcccCCCC---CcHHHHHHHHHHHHHHcC---CcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEee
Q 010610 343 AMVARGDLGAELPI---EEVPLLQEEIIRTCRSMG---KAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (506)
Q Consensus 343 ImIaRGDLgvelg~---e~V~~~Qk~II~~c~~~G---kPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs 415 (506)
|=+ -+.++. .+...+.++|-.-....+ ..||+-|-. .|..|+...+. +...|+|.|=-|
T Consensus 143 IDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 143 LDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------LTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---------CCHHHHHHHHHHHHHcCCCEEEcC
Confidence 421 123332 234444444444333334 345554433 35566555444 667899998765
Q ss_pred c-cccCCCCHHHHHHHHHHHHHH
Q 010610 416 G-ETAHGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 416 ~-ETA~G~yPveaV~~m~~I~~~ 437 (506)
. =+.. .--++.|+.|+++++.
T Consensus 209 TGf~~~-GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 209 TGFNGP-GASIENVSLMSAVCDS 230 (288)
T ss_dssp CSSSSC-CCCHHHHHHHHHHHHH
T ss_pred CCCCCC-CCCHHHHHHHHHHHHH
Confidence 1 1222 3346789999999854
No 225
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=57.24 E-value=24 Score=37.34 Aligned_cols=54 Identities=22% Similarity=0.399 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHhCCcEEEEeCCCCC----------hHHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 121 NTREMIWKLAEAGMNVARLNMSHGD----------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 121 ~~~e~i~~li~aGm~v~RiN~SHg~----------~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
.+++.|+.|-+.|+|++||-+++.. .+.+.+.++.+=+...+.| +.+++||-..
T Consensus 46 ~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G---i~vildlH~~ 109 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND---MYVIINLHHE 109 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEEECCSC
T ss_pred CCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEecCCC
Confidence 3689999999999999999887532 1222233333333334444 8889998655
No 226
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=57.14 E-value=50 Score=30.70 Aligned_cols=99 Identities=16% Similarity=0.187 Sum_probs=55.5
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec-----C--ChhhhhhHHHHHHhC-CEEEEcCCCcc
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-----E--SADSIPNLHSIITAS-DGAMVARGDLG 351 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI-----E--t~~aveNldeIl~~s-DGImIaRGDLg 351 (506)
+.++.+.++|++.+.+.- .+.++...+.++..+.. ++....-+ . +.+.++.+++.+... +. .+|=|..|
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~-~~~iGEiG 99 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAK-VVAVGEIG 99 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSS-EEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCC-EEEEEEec
Confidence 445677889999876542 34677777777665543 33322222 1 123445555555431 22 22335666
Q ss_pred cCCCCC-cHHHHHH----HHHHHHHHcCCcEEEEe
Q 010610 352 AELPIE-EVPLLQE----EIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 352 velg~e-~V~~~Qk----~II~~c~~~GkPvivAT 381 (506)
.+.... .-...|+ ..++.|.+.|+||++.|
T Consensus 100 ld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 100 LDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp EECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 654332 1134454 45667999999999987
No 227
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=56.93 E-value=1.4e+02 Score=29.22 Aligned_cols=123 Identities=13% Similarity=0.114 Sum_probs=78.5
Q ss_pred HhhHhcCCcEEEEccC----------C-CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcc
Q 010610 283 KFGVDNKVDFYAVSFV----------K-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG 351 (506)
Q Consensus 283 ~~al~~gvD~IalSfV----------~-saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLg 351 (506)
+.+.+.|+|.+-.-+- . ..+..+.++++.++.| +.+++-+-+++.++-+.+. +|.+-||-+++-
T Consensus 59 ~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~ 133 (276)
T 1vs1_A 59 LAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAG--LPVVTEVLDPRHVETVSRY---ADMLQIGARNMQ 133 (276)
T ss_dssp HHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CCEEEECCCGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcC--CcEEEecCCHHHHHHHHHh---CCeEEECccccc
Confidence 4455677777643211 1 2577888888877654 6788888888888776664 699999865542
Q ss_pred cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH-hCcceeEee--ccccCCCCHHHHH
Q 010610 352 AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLS--GETAHGKFPLKAV 428 (506)
Q Consensus 352 velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~-dG~D~vmLs--~ETA~G~yPveaV 428 (506)
+..+++++-+.||||++.|.|- .|-.|+...++++. .|.+-++|. +=+..-.||.+.+
T Consensus 134 -----------n~~ll~~~a~~~kPV~lk~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~v 194 (276)
T 1vs1_A 134 -----------NFPLLREVGRSGKPVLLKRGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTL 194 (276)
T ss_dssp -----------CHHHHHHHHHHTCCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBC
T ss_pred -----------CHHHHHHHHccCCeEEEcCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchh
Confidence 2334556667899999987432 36678777777665 466444442 3333334665554
Q ss_pred H
Q 010610 429 K 429 (506)
Q Consensus 429 ~ 429 (506)
.
T Consensus 195 d 195 (276)
T 1vs1_A 195 D 195 (276)
T ss_dssp B
T ss_pred C
Confidence 4
No 228
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=56.75 E-value=62 Score=32.26 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=65.9
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEccC-------------CC------------HHHHHHHHHHHHhcCCCce
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KD------------AQVVHELKNYLKSCGADIH 319 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalSfV-------------~s------------aedV~~lr~~l~~~~~~i~ 319 (506)
.||..|++.+ +.+.+.|+|+|=+-.- +. +.-+.++.+.+.+.- +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 5777776555 4557899999965432 11 122233333333322 567
Q ss_pred EEEecCCh------hhhhhHHHHHH----h-CCEEEEcCCCcc-cCCCCCcHHHHHHHHHH-HHHHcCCcEEEEehhhhh
Q 010610 320 VIVKIESA------DSIPNLHSIIT----A-SDGAMVARGDLG-AELPIEEVPLLQEEIIR-TCRSMGKAVIVATNMLES 386 (506)
Q Consensus 320 IIaKIEt~------~aveNldeIl~----~-sDGImIaRGDLg-velg~e~V~~~Qk~II~-~c~~~GkPvivATqmLeS 386 (506)
|..||--- ...++..++++ . +|.|-+.-|... ...+... ..+...++ ..+..++||+....+
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Ggi--- 286 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP--GYQVSFAEKIREQADMATGAVGMI--- 286 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHCCEEEECSSC---
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc--cchHHHHHHHHHHCCCCEEEECCC---
Confidence 88887321 11222223332 2 798888766432 1111110 01112222 223448998876432
Q ss_pred hhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 387 Mi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
-+. .++..++..| +|+|++.
T Consensus 287 ------~s~---~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 287 ------TDG---SMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ------CSH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCH---HHHHHHHHcCCceEEeec
Confidence 222 3466788888 9999985
No 229
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=56.72 E-value=18 Score=34.77 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=35.9
Q ss_pred CCHHHHHHHH-HhCCcEEEEeCCCC---------ChHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 121 NTREMIWKLA-EAGMNVARLNMSHG---------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 121 ~~~e~i~~li-~aGm~v~RiN~SHg---------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
-+.+.++.|. +.|+|++|+-++.. +++.+.+.++.+=+...+.| +.+++|+-+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G---i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED---MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678999998 49999999987652 22444445555444555666 667888754
No 230
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=56.57 E-value=74 Score=29.97 Aligned_cols=143 Identities=17% Similarity=0.213 Sum_probs=79.1
Q ss_pred CCCCccCHHH----hHhhHhcCCcEEEE-----ccCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH
Q 010610 272 PSITEKDWDD----IKFGVDNKVDFYAV-----SFVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (506)
Q Consensus 272 p~ltekD~~d----I~~al~~gvD~Ial-----SfV~s----aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~ 338 (506)
|++..-|..+ ++.+.+.|+|++-+ +||.+ .+.++++|++. +....+--+|++++- -++..++
T Consensus 9 psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~---~~~~~vhlmv~dp~~--~i~~~~~ 83 (230)
T 1tqj_A 9 PSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT---KKTLDVHLMIVEPEK--YVEDFAK 83 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC---CSEEEEEEESSSGGG--THHHHHH
T ss_pred EEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc---CCcEEEEEEccCHHH--HHHHHHH
Confidence 5555555544 45667789998633 33322 24455554432 223344478888743 3566665
Q ss_pred h-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe-ec
Q 010610 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SG 416 (506)
Q Consensus 339 ~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL-s~ 416 (506)
+ +||+.+.-.-.. . + .-.+.++.++.+|+-+++++ ||. |..| ...++.+++|.+.+ |-
T Consensus 84 aGadgv~vh~e~~~----~-~---~~~~~~~~i~~~g~~~gv~~--------~p~-t~~e---~~~~~~~~~D~v~~msv 143 (230)
T 1tqj_A 84 AGADIISVHVEHNA----S-P---HLHRTLCQIRELGKKAGAVL--------NPS-TPLD---FLEYVLPVCDLILIMSV 143 (230)
T ss_dssp HTCSEEEEECSTTT----C-T---THHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESS
T ss_pred cCCCEEEECccccc----c-h---hHHHHHHHHHHcCCcEEEEE--------eCC-CcHH---HHHHHHhcCCEEEEEEe
Confidence 5 899998611001 1 1 13467888899999999985 221 1222 23456678997753 22
Q ss_pred ccc--CCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETA--HGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA--~G~yPveaV~~m~~I~~~aE 439 (506)
+.. --+|+-...+.++++.+..+
T Consensus 144 ~pg~ggq~~~~~~~~~i~~lr~~~~ 168 (230)
T 1tqj_A 144 NPGFGGQSFIPEVLPKIRALRQMCD 168 (230)
T ss_dssp CC----CCCCGGGHHHHHHHHHHHH
T ss_pred ccccCCccCcHHHHHHHHHHHHHHH
Confidence 222 22466566666666655553
No 231
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=56.49 E-value=38 Score=36.24 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEc-CCCcccCCCCCcHHHHHHHHHHHHHH----
Q 010610 300 DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVA-RGDLGAELPIEEVPLLQEEIIRTCRS---- 372 (506)
Q Consensus 300 saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIa-RGDLgvelg~e~V~~~Qk~II~~c~~---- 372 (506)
+.++++++++.. +.+|+.| +-+ .+......+. +|+|.|+ .|--..+.+... ..+..++.++++.
T Consensus 331 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 331 TWKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNLK 401 (511)
T ss_dssp CHHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhccC
Confidence 356777777653 5678888 333 2333333333 8999994 121111222222 2334555555542
Q ss_pred cCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 373 MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 373 ~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
..+|||....+- --.|+..++..|+|+||+..
T Consensus 402 ~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 402 DKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred CCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 268888765322 23589999999999999853
No 232
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=56.30 E-value=93 Score=31.45 Aligned_cols=116 Identities=13% Similarity=0.076 Sum_probs=68.6
Q ss_pred HHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCC
Q 010610 366 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGG 445 (506)
Q Consensus 366 II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~ 445 (506)
+...|+..|.++.+.. |..+....+...-..|++.+... |.| -++.+...+++.+.+..++..
T Consensus 108 lA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~-----~~~-~~a~~~a~~l~~~~~~~~~v~ 170 (372)
T 1p5j_A 108 AAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATCKVVG-----ELL-DEAFELAKALAKNNPGWVYIP 170 (372)
T ss_dssp HHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECC-----SCH-HHHHHHHHHHHHHSTTEEECC
T ss_pred HHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHhcCCEEEEEC-----CCH-HHHHHHHHHHHHhcCCcEEeC
Confidence 5567899999988762 22222233556667799877543 234 467777666665532222211
Q ss_pred CCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----C-CCCeEEEEeC
Q 010610 446 AMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----R-PSGTIFAFTN 505 (506)
Q Consensus 446 ~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~~----R-P~~pIia~T~ 505 (506)
+ |.+ ......-...+.++.++++ . .||+.+-+|.|+--++++ . |.+.|+++.+
T Consensus 171 ~-~~n------~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~ 231 (372)
T 1p5j_A 171 P-FDD------PLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMET 231 (372)
T ss_dssp S-SCC------HHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred C-CCC------HHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEec
Confidence 1 110 0112222334567777775 4 899999999987666543 3 8899999875
No 233
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.30 E-value=75 Score=32.43 Aligned_cols=125 Identities=10% Similarity=0.023 Sum_probs=64.1
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEccC-------------CCHHH------------HHHHHHHHH-hcCCCc
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KDAQV------------VHELKNYLK-SCGADI 318 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalSfV-------------~saed------------V~~lr~~l~-~~~~~i 318 (506)
.||..|++.+ +.+.+.|+|+|=+-.- +...| +.++.+.++ ..+.+
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~- 233 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE- 233 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-
Confidence 5777777665 3457889999987332 22111 222222222 22545
Q ss_pred eEEEecCCh---------hhhhhHHHHHHh-----CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhh
Q 010610 319 HVIVKIESA---------DSIPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNML 384 (506)
Q Consensus 319 ~IIaKIEt~---------~aveNldeIl~~-----sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmL 384 (506)
.|..||-.- ..++..-++++. +|.|-+..|...-..+...+. .+-+..+..++|||....
T Consensus 234 ~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~----~~~~ik~~~~iPvi~~Gg-- 307 (377)
T 2r14_A 234 RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEG----FREQMRQRFKGGLIYCGN-- 307 (377)
T ss_dssp GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTT----HHHHHHHHCCSEEEEESS--
T ss_pred cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHH----HHHHHHHHCCCCEEEECC--
Confidence 788887321 112333333332 688888655321111111111 111223356789887642
Q ss_pred hhhhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 385 ESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 385 eSMi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
. + ..+...++..| +|+|++.
T Consensus 308 -------i-~---~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 308 -------Y-D---AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp -------C-C---HHHHHHHHHTTSCSEEEES
T ss_pred -------C-C---HHHHHHHHHCCCceEEeec
Confidence 2 3 23466788888 9999985
No 234
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=56.23 E-value=15 Score=36.52 Aligned_cols=64 Identities=9% Similarity=0.067 Sum_probs=50.1
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhh--hhHHHHHHh-CCEEEEcC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI--PNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~av--eNldeIl~~-sDGImIaR 347 (506)
.+.++.+++.|+|+|++-.. ++++++++.+.+...+.++ +||=--|+ +|+.++.+. +|+|-+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 57788889999999999884 7899999988887644454 44444444 788999888 89999986
No 235
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=56.22 E-value=19 Score=36.81 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=42.8
Q ss_pred HHHhHhhHhcCCcEEEEccCC------CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHhCCEEEEcCCCc
Q 010610 279 WDDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDGAMVARGDL 350 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~------saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~sDGImIaRGDL 350 (506)
.++.+.+.+.|+|+|.++.-- .+..+..+.+..+..+.++.||+ .|-+..-+ +..+..=+|++||||.=|
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv--~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDV--LKALALGARCIFLGRPIL 305 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHH--HHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHH--HHHHHcCCCEEEECHHHH
Confidence 577788899999999995421 12334444444433455688887 35543322 334433389999998533
No 236
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=56.02 E-value=1e+02 Score=30.77 Aligned_cols=142 Identities=13% Similarity=0.179 Sum_probs=83.6
Q ss_pred cCHHHhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecCChhh------------hhhHHHHH
Q 010610 277 KDWDDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIESADS------------IPNLHSII 337 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIEt~~a------------veNldeIl 337 (506)
.+.+++..|.+.|+|.|=+- -.-+..-++.++++. +++|.++|.-..| .+.++...
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-----~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-----QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-----CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-----CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 36788888999999998654 122556677766542 5889999998877 24555555
Q ss_pred Hh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 338 TA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 338 ~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
+. +|||.+|- |.-+ +--++... +++++.|. +.++-+. .-++. .++..+ .+-..+..|+|-|+.||
T Consensus 122 ~~GAdGvVfG~--L~~d-g~iD~~~~-~~Li~~a~--~l~vTFH-RAFD~-----~~d~~~--Ale~Li~lGvdrILTSG 187 (287)
T 3iwp_A 122 LYGADGLVFGA--LTED-GHIDKELC-MSLMAICR--PLPVTFH-RAFDM-----VHDPMA--ALETLLTLGFERVLTSG 187 (287)
T ss_dssp HTTCSEEEECC--BCTT-SCBCHHHH-HHHHHHHT--TSCEEEC-GGGGG-----CSCHHH--HHHHHHHHTCSEEEECT
T ss_pred HcCCCEEEEee--eCCC-CCcCHHHH-HHHHHHcC--CCcEEEE-Cchhc-----cCCHHH--HHHHHHHcCCCEEECCC
Confidence 55 89999973 1111 11123333 44555553 4555443 11111 111111 12233334999999987
Q ss_pred cccCCCCHHHHHHHHHHHHHHHhc
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTEA 440 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE~ 440 (506)
--.. ..+-+..+++++..+..
T Consensus 188 ~~~~---a~~Gl~~Lk~Lv~~a~~ 208 (287)
T 3iwp_A 188 CDSS---ALEGLPLIKRLIEQAKG 208 (287)
T ss_dssp TSSS---TTTTHHHHHHHHHHHTT
T ss_pred CCCC---hHHhHHHHHHHHHHhCC
Confidence 5222 24778888888877664
No 237
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=55.91 E-value=29 Score=31.99 Aligned_cols=84 Identities=14% Similarity=0.064 Sum_probs=50.2
Q ss_pred HHHhHhhHhcCCcEEEEccCC--------CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEcC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVK--------DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~--------saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIaR 347 (506)
.+.++.+.+.|+|+|.+.-+. +.+.++++++. . +++|++ -|.+. +|+.+.++. +||+++|+
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~---~--~~pvia~GGi~~~---~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS---V--RIPVIASGGAGRV---EHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH---C--SSCEEEESCCCSH---HHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh---c--CCCEEEeCCCCCH---HHHHHHHHcCCcHHHHHH
Confidence 345677788999999875443 23344444443 2 455655 34443 566666665 89999997
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcE
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAV 377 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPv 377 (506)
+=+....+ .+++.+..+++|.++
T Consensus 229 al~~~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 229 LFHFRVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp HHHTTSSC-------HHHHHHHHHHTTCBC
T ss_pred HHHcCCCC-------HHHHHHHHHHcCCCC
Confidence 54433322 234555567777664
No 238
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=55.85 E-value=51 Score=31.79 Aligned_cols=132 Identities=12% Similarity=0.103 Sum_probs=74.0
Q ss_pred CHHHhHhhHhcCCcEEEEccC-CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFV-KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELP 355 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV-~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg 355 (506)
|...+..+.+.|+|+|.+.-. -+ ++++++.++....|-+ +++-+.+.+- ++..++. +|.|-|..-||. .++
T Consensus 117 d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~--~lvev~~~~E---~~~a~~~gad~IGvn~~~l~-~~~ 189 (254)
T 1vc4_A 117 DPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLE--ALVEVHTERE---LEIALEAGAEVLGINNRDLA-TLH 189 (254)
T ss_dssp SHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCE--EEEEECSHHH---HHHHHHHTCSEEEEESBCTT-TCC
T ss_pred CHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCe--EEEEECCHHH---HHHHHHcCCCEEEEccccCc-CCC
Confidence 344677789999999987422 12 4555555544455533 3333333332 2333332 688888776654 222
Q ss_pred CCcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHH
Q 010610 356 IEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 431 (506)
Q Consensus 356 ~e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m 431 (506)
. ++. .-+++....... ++|++.. +..-|.. |+..... |+|+++...---.+..|.++++-|
T Consensus 190 ~-dl~-~~~~L~~~i~~~~~~~~vIAe---------gGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 190 I-NLE-TAPRLGRLARKRGFGGVLVAE---------SGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp B-CTT-HHHHHHHHHHHTTCCSEEEEE---------SCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred C-CHH-HHHHHHHhCccccCCCeEEEE---------cCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 2 121 112333333333 5677643 3444443 5667777 999999865555678888888765
No 239
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=55.83 E-value=22 Score=34.99 Aligned_cols=70 Identities=20% Similarity=0.173 Sum_probs=46.1
Q ss_pred HHhHhhHhcCCcEEEEc------cCCCH-HHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS------fV~sa-edV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. +.-|. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++|+.+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 34467789999999762 33344 444444444555566889999874 46677666665555 899998754
Q ss_pred C
Q 010610 349 D 349 (506)
Q Consensus 349 D 349 (506)
.
T Consensus 106 ~ 106 (291)
T 3a5f_A 106 Y 106 (291)
T ss_dssp C
T ss_pred C
Confidence 3
No 240
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=55.78 E-value=39 Score=32.13 Aligned_cols=144 Identities=15% Similarity=0.121 Sum_probs=84.7
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH-------h-CCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-------A-SDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~-------~-sDG 342 (506)
|..|..|.+.+ +.+.++|++.|+++ +..+...++.+. +..+.+.+-|=-|.|-.+.+..+. . +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 55566665554 57788999999875 445666666653 445777777766665443332222 1 565
Q ss_pred EEEc--CCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeecccc
Q 010610 343 AMVA--RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETA 419 (506)
Q Consensus 343 ImIa--RGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ETA 419 (506)
|-+- .|.|- +=.++.+..-.+.+.++|...+.|||+-|-.| |..|+...+. +...|+|.|=-|
T Consensus 88 vd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l---------~~e~i~~a~~ia~eaGADfVKTs---- 153 (220)
T 1ub3_A 88 VDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGYF---------SPEEIARLAEAAIRGGADFLKTS---- 153 (220)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECC----
T ss_pred EEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCCC---------CHHHHHHHHHHHHHhCCCEEEeC----
Confidence 5321 11110 00122455555666666766667788766443 5566655555 667899998655
Q ss_pred CCCC----HHHHHHHHHHHH
Q 010610 420 HGKF----PLKAVKVMHTVS 435 (506)
Q Consensus 420 ~G~y----PveaV~~m~~I~ 435 (506)
.|.. -++.|+.|++++
T Consensus 154 TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 3433 458999998764
No 241
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=55.76 E-value=1.1e+02 Score=29.82 Aligned_cols=139 Identities=18% Similarity=0.247 Sum_probs=87.3
Q ss_pred HHHhHhhHhcC-CcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEe---c-CChhhhhhHHHHHHh-----CCEEEEcCC
Q 010610 279 WDDIKFGVDNK-VDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK---I-ESADSIPNLHSIITA-----SDGAMVARG 348 (506)
Q Consensus 279 ~~dI~~al~~g-vD~IalSfV~saedV~~lr~~l~~~~~~i~IIaK---I-Et~~aveNldeIl~~-----sDGImIaRG 348 (506)
.+.++.+++.| +|||=+-+-...+.+.++.+...+. .++||+- - .|+. .+.+.+++.. +|.+=|+
T Consensus 122 ~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDIvKia-- 196 (276)
T 3o1n_A 122 IDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADIPKIA-- 196 (276)
T ss_dssp HHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSEEEEE--
T ss_pred HHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCEEEEE--
Confidence 44567889999 9999998866666777776655443 4556653 2 2443 3445444443 5766665
Q ss_pred CcccCCCC--CcHHHHHHHHHHHHHH-cCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCccee--EeeccccCCCC
Q 010610 349 DLGAELPI--EEVPLLQEEIIRTCRS-MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV--MLSGETAHGKF 423 (506)
Q Consensus 349 DLgvelg~--e~V~~~Qk~II~~c~~-~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~v--mLs~ETA~G~y 423 (506)
-++- +++....+-.-+.... .++|+|.. +|=..+..+| +.+.+. |+-.. .+...+|-|..
T Consensus 197 ----~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SR-----i~~~~~-GS~vTf~~l~~~sAPGQl 261 (276)
T 3o1n_A 197 ----VMPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISR-----LAGEVF-GSAATFGAVKKASAPGAI 261 (276)
T ss_dssp ----ECCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHH-----HCHHHH-TCCEEECBSSCCSSTTCC
T ss_pred ----ecCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHH-----HHHHHh-CCceEecCCCCCCCCCCC
Confidence 2333 3555555544333333 67898865 5666667777 777765 33332 35678999999
Q ss_pred HHHHHHHHHHHHHH
Q 010610 424 PLKAVKVMHTVSLR 437 (506)
Q Consensus 424 PveaV~~m~~I~~~ 437 (506)
+++-++.+-+++..
T Consensus 262 ~~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 262 SVADLRTVLTILHQ 275 (276)
T ss_dssp BHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcc
Confidence 99888877666543
No 242
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=55.69 E-value=85 Score=29.48 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=77.5
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHH-------HHh-CCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI-------ITA-SDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeI-------l~~-sDG 342 (506)
|..|+.|.+.+ +.+.++|++.|+++ ++-+...++.+. .+++.+-++-|.|....... ++. +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 55677766555 45677999998743 444555555552 56787778877776544332 222 566
Q ss_pred EEEcCCCcccCCCC---CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccc
Q 010610 343 AMVARGDLGAELPI---EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGET 418 (506)
Q Consensus 343 ImIaRGDLgvelg~---e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ET 418 (506)
|=+ -+.++. .+...+.+. +++.+++..|+++-. ++|+ +.-+..|+.+++. +...|+|++-.|.--
T Consensus 87 Id~-----viN~g~~~~~~~~~~~~~-i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 87 LDI-----VWNLSAFKSEKYDFVVEE-LKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHH-HHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEE-----EecHHHHhcCChHHHHHH-HHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 641 111111 122333333 666555544876532 2332 2334455666665 456699999444211
Q ss_pred cCCCCHHHHHHHHHHH
Q 010610 419 AHGKFPLKAVKVMHTV 434 (506)
Q Consensus 419 A~G~yPveaV~~m~~I 434 (506)
..|.+-.+.++.|.+.
T Consensus 156 ~~gga~~~~i~~v~~~ 171 (225)
T 1mzh_A 156 APRGTTLEEVRLIKSS 171 (225)
T ss_dssp SSSCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 1244456777766543
No 243
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=55.36 E-value=31 Score=32.78 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHH
Q 010610 363 QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVS 435 (506)
Q Consensus 363 Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~ 435 (506)
-+..++.|+++|++|.+.| ++ +-.+...++..|+|+|+- +||..+.+.+.++-
T Consensus 193 ~~~~v~~~~~~G~~V~~WT------vn-------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~ 245 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWA------AH-------TPSQITKALDLGVKVFTT-------DRPTLAIALRTEHR 245 (250)
T ss_dssp CHHHHHHHHHTTCEEEEEC------CC-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEe------CC-------CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhh
Confidence 4688999999999999997 11 123466788899999885 58999888877653
No 244
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=54.33 E-value=56 Score=33.05 Aligned_cols=95 Identities=14% Similarity=-0.012 Sum_probs=57.8
Q ss_pred HhHhhHhcCCcEEEE------ccCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCCc
Q 010610 281 DIKFGVDNKVDFYAV------SFVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGDL 350 (506)
Q Consensus 281 dI~~al~~gvD~Ial------SfV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGDL 350 (506)
.++|.++.|+|+|++ ++.-|.++-.++-+. ..+.+++||+-+= |.++++.....-+. +|++|+-+-.+
T Consensus 52 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 52 KGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVL 129 (344)
T ss_dssp HHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCcc
Confidence 346788999999886 345555555555554 3445788999874 46677666665555 89999975443
Q ss_pred ccCCCCCcHHHHHHHHHHHHH-HcCCcEEEE
Q 010610 351 GAELPIEEVPLLQEEIIRTCR-SMGKAVIVA 380 (506)
Q Consensus 351 gvelg~e~V~~~Qk~II~~c~-~~GkPvivA 380 (506)
.--...+.+...-+ ..|. +.+.|+++.
T Consensus 130 ~~~~s~~~l~~~f~---~IA~aa~~lPiilY 157 (344)
T 2hmc_A 130 SRGSVIAAQKAHFK---AILSAAPEIPAVIY 157 (344)
T ss_dssp SSTTCHHHHHHHHH---HHHHHSTTSCEEEE
T ss_pred CCCCCHHHHHHHHH---HHHhhCCCCcEEEE
Confidence 21011122332223 3345 567898875
No 245
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=54.19 E-value=28 Score=34.06 Aligned_cols=117 Identities=12% Similarity=0.138 Sum_probs=66.2
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCC-ceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCC-
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD-IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIE- 357 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~-i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e- 357 (506)
+.++.+.+.|+|++.++-+-. +++.++.+.++++|-+ +.+++ -....+.+++|.+.+.|+...-.=.|+ .|..
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~~i~lia---p~s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~ 184 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLETVFLLA---PTSTDARIATVVRHATGFVYAVSVTGV-TGMRE 184 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCEEECEEC---TTCCHHHHHHHHTTCCSCEEEECC---------
T ss_pred HHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCceEEEeC---CCCCHHHHHHHHHhCCCCEEEEecCcc-cCCCC
Confidence 455667788999999987754 6677778888777643 33443 223456889999887665432111111 1111
Q ss_pred cHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 358 EVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 358 ~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.+..-....++..+++ +.|+++... .=|.. ++.. + .|+|+++..
T Consensus 185 ~~~~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e---~a~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 185 RLPEEVKDLVRRIKARTALPVAVGFG---------VSGKA---TAAQ-A-AVADGVVVG 229 (271)
T ss_dssp ----CCHHHHHHHHTTCCSCEEEESC---------CCSHH---HHHH-H-TTSSEEEEC
T ss_pred CCCccHHHHHHHHHhhcCCCEEEEcC---------CCCHH---HHHH-h-cCCCEEEEC
Confidence 1111123445555544 789988742 32332 2444 3 899999874
No 246
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=54.16 E-value=65 Score=31.69 Aligned_cols=129 Identities=12% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCccCHHHhHhhHhcCCcEEEEccCCCH-------------HHHHHHHHHHHhcCCCceEEEecCC------hhhhhhHH
Q 010610 274 ITEKDWDDIKFGVDNKVDFYAVSFVKDA-------------QVVHELKNYLKSCGADIHVIVKIES------ADSIPNLH 334 (506)
Q Consensus 274 ltekD~~dI~~al~~gvD~IalSfV~sa-------------edV~~lr~~l~~~~~~i~IIaKIEt------~~aveNld 334 (506)
+|-+|.---+.+-+.|+|.|.+..--.. +++..--+.+.+.-....|++=++- .++++|..
T Consensus 22 ~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~ 101 (264)
T 1m3u_A 22 ITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAA 101 (264)
T ss_dssp EECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHH
Q ss_pred HHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEE----EEehhhhhh----hcCCCCChhh--cccHHH
Q 010610 335 SIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVI----VATNMLESM----IVHPTPTRAE--VSDIAI 403 (506)
Q Consensus 335 eIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvi----vATqmLeSM----i~~~~PtRAE--v~Dvan 403 (506)
.+++. +++|-+-=| ..+...|+++.++|+||+ +--|-...+ +..-...+++ +.|.--
T Consensus 102 rl~kaGa~aVklEgg------------~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a 169 (264)
T 1m3u_A 102 TVMRAGANMVKIEGG------------EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALA 169 (264)
T ss_dssp HHHHTTCSEEECCCS------------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECCc------------HHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHH
Q ss_pred HHHhCcceeEe
Q 010610 404 AVREGADAVML 414 (506)
Q Consensus 404 av~dG~D~vmL 414 (506)
+...|+|+++|
T Consensus 170 ~~eAGA~~ivl 180 (264)
T 1m3u_A 170 LEAAGAQLLVL 180 (264)
T ss_dssp HHHHTCCEEEE
T ss_pred HHHCCCcEEEE
No 247
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=54.11 E-value=3.3 Score=37.67 Aligned_cols=129 Identities=24% Similarity=0.276 Sum_probs=72.7
Q ss_pred eecCCCCccccccccccccccccccccccccccCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCCh---
Q 010610 70 VPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDH--- 146 (506)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~--- 146 (506)
+|++|+..+.|+++|+||..... ++.+..+-.| -+||+.
T Consensus 4 ~~~T~~g~~~L~~El~~L~~~~r------------------------------p~i~~~i~~A--------~~~gDlsEN 45 (158)
T 1grj_A 4 IPMTLRGAEKLREELDFLKSVRR------------------------------PEIIAAIAEA--------REHGDLKEN 45 (158)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTHH------------------------------HHHHHHHHHH--------HTTCCGGGC
T ss_pred cccCHHHHHHHHHHHHHHHhccc------------------------------hhhHhhHHHH--------Hhccccccc
Confidence 46888888899999988875331 3445555554 466763
Q ss_pred -HHH------HHHHHHHHHHHHhcCCceEEEEeecC----CCeeEEeccCCCeEec---CCCEEEEEEe--cC-CCCceE
Q 010610 147 -ASH------QKVIDLVKEYNAQSKDNVIAIMLDTK----GPEVRSGDLPQPITLT---SGQEFTFTIQ--RG-VGSAEC 209 (506)
Q Consensus 147 -e~~------~~~i~~ir~~~~~~~~~~i~Il~DL~----GPkIRtG~l~~~i~Lk---~G~~v~lt~~--~~-~~~~~~ 209 (506)
++| ..+=..+++..+++. -+-.+|.. ..++..|.. +.++ .|++.++++- .. ....+.
T Consensus 46 aeY~aak~~q~~~e~ri~~Le~~L~---~a~vid~~~~~~~~~V~~Gs~---V~l~~~~~~~~~~y~iVg~~ead~~~~~ 119 (158)
T 1grj_A 46 AEYHAAREQQGFCEGRIKDIEAKLS---NAQVIDVTKMPNNGRVIFGAT---VTVLNLDSDEEQTYRIVGDDEADFKQNL 119 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HEEEECGGGSCCCSBCCTTCE---EEEEETTTTEEEEEEEECTTTCBGGGTE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHh---hCeecCccccCCCCEEEeCcE---EEEEECCCCCEEEEEEECHHHhCCcCCE
Confidence 222 122235666666654 24455543 234444432 4443 4655555543 11 123457
Q ss_pred EEeccch--hhhhcCCCCEEEEe--CCeEEEEEEEEe
Q 010610 210 VSVNYDD--FVNDVEVGDMLLVD--GGMMSLLVKSKT 242 (506)
Q Consensus 210 i~v~~~~--l~~~v~~Gd~IliD--DG~i~l~V~~~~ 242 (506)
|++..|- -+-.-++||.|.+. +|...++|.++.
T Consensus 120 IS~~SPlG~ALlGk~~GD~v~v~~p~G~~~~~I~~I~ 156 (158)
T 1grj_A 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 (158)
T ss_dssp EESSSHHHHHHTTCBTTCEECC------CCEEEEEEE
T ss_pred EcCCCHHHHHHcCCCCCCEEEEEcCCCcEEEEEEEEE
Confidence 8887762 23345899999887 788888888775
No 248
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=53.97 E-value=76 Score=30.37 Aligned_cols=67 Identities=4% Similarity=0.022 Sum_probs=47.6
Q ss_pred CHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcC-CCceEEEecCChhhhhhHHHHHHh-CCEEEE
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-ADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~-~~i~IIaKIEt~~aveNldeIl~~-sDGImI 345 (506)
+.+.++.+...|+|||.+-.=..+.+-.+++.++.... ....++..|=..+-- .+..++.. .||||+
T Consensus 29 ~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~-~i~~~l~~g~~gI~~ 97 (256)
T 1dxe_A 29 NPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPV-IIKRLLDIGFYNFLI 97 (256)
T ss_dssp SHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHH-HHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCHH-HHHHHHhcCCceeee
Confidence 56677888899999999987666777777887776542 235678887544332 26677766 789886
No 249
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=53.73 E-value=1.4e+02 Score=29.09 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |.......+...-..|++.+...++. .| -++++...+++++-...+++
T Consensus 76 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLTM-----------PETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 45677899999988762 22222234556677899977764321 13 35776666665443221011
Q ss_pred CCCCCCCCcCcCCCh-HHH-HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----C-CCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHM-SEM-FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----R-PSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~-~~~-ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~~----R-P~~pIia~T~ 505 (506)
...| .+.. ..+ ....+.++.++++ . .||+.+-+|.|+--++++ . |...|+++.+
T Consensus 141 ~~~~-------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~ 204 (316)
T 1y7l_A 141 LKQF-------ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEP 204 (316)
T ss_dssp CCTT-------TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEE
T ss_pred CCCC-------CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEec
Confidence 1111 1111 121 2234567788875 4 789999999997766653 4 9999999876
No 250
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=53.66 E-value=41 Score=33.18 Aligned_cols=96 Identities=10% Similarity=0.077 Sum_probs=59.1
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDGImIaRGD 349 (506)
.++|.++.|+|+|.+. .....|..+-++..++..+.+++||+-+ -|.++++.....-+. +|++|+-+-.
T Consensus 30 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 30 LCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3467789999998643 2233344444444455556778888765 467777777666665 8999987544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+-- .. -..+.+..-..|.+.+.|+++.
T Consensus 110 y~~-~~---~~~l~~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 110 YFP-LK---DAQIESYFRAIADAVEIPVVIY 136 (300)
T ss_dssp SSC-CC---HHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCC-CC---HHHHHHHHHHHHHHCCCCEEEE
Confidence 321 12 2233344444556668999976
No 251
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=53.30 E-value=36 Score=33.83 Aligned_cols=97 Identities=8% Similarity=0.057 Sum_probs=60.1
Q ss_pred HHhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-C-CEEEEcC
Q 010610 280 DDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-S-DGAMVAR 347 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-s-DGImIaR 347 (506)
+.++|.++.|+|+|.+. .....|..+-++...+..+.+++||+-+= +.++++.....-+. + ||+|+-+
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 45578889999998763 23334444444555566677889998764 56777776666665 4 9999875
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
-.+.- .. -..+.+..-..|.+.+.|+++-
T Consensus 112 P~y~~-~s---~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 112 PYYNK-PS---QEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCSSC-CC---HHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCCC-CC---HHHHHHHHHHHHHhCCCCEEEE
Confidence 43321 11 1223334444455568888875
No 252
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=53.24 E-value=68 Score=31.92 Aligned_cols=124 Identities=17% Similarity=0.197 Sum_probs=73.2
Q ss_pred HHhHhhHhcCCcEEEEc---------cCC-----CHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhhHHHHHHh-CCE
Q 010610 280 DDIKFGVDNKVDFYAVS---------FVK-----DAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDG 342 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS---------fV~-----saedV~~lr~~l~~~~~~i~IIaK--IEt~~aveNldeIl~~-sDG 342 (506)
+..+..-+.|+|.|.+= |-. +.++++++++.+ .+++++| |-. ++..+.+.+. +|+
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaGAD~ 103 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELKVDM 103 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcCCCE
Confidence 34455667899886554 332 788888877543 6889987 333 4444444444 899
Q ss_pred EEEcCCCcccCCCCCcHHHHHHHHHHHHHH--cCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccC
Q 010610 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRS--MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAH 420 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V~~~Qk~II~~c~~--~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~ 420 (506)
| |....+.+.+ ++..+++ .|.++++-. .+..| .-.++..|+|.|-.+++-..
T Consensus 104 I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~v-----------~~~~E---a~~a~~~Gad~I~v~g~~gT 157 (297)
T 4adt_A 104 L-----DESEVLTMAD-------EYNHINKHKFKTPFVCGC-----------TNLGE---ALRRISEGASMIRTKGEAGT 157 (297)
T ss_dssp E-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----------SSHHH---HHHHHHHTCSEEEECCCTTS
T ss_pred E-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEEe-----------CCHHH---HHHHHhCCCCEEEECCCcCC
Confidence 8 2221122222 2233333 577777632 12333 45677889999998876222
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 010610 421 GKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 421 G~yPveaV~~m~~I~~~a 438 (506)
| +-+++|+|+..+..+.
T Consensus 158 G-~~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 158 G-NIIEAIKHIRTVNNEI 174 (297)
T ss_dssp C-CCHHHHHHHHHHHHHH
T ss_pred C-chHHHHHHHHHhhhhh
Confidence 3 3489999998875433
No 253
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=53.17 E-value=68 Score=31.41 Aligned_cols=102 Identities=13% Similarity=0.152 Sum_probs=60.3
Q ss_pred cCHHH-hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC---CceEEEe-----cC--ChhhhhhHHHHHHhCCEEEE
Q 010610 277 KDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA---DIHVIVK-----IE--SADSIPNLHSIITASDGAMV 345 (506)
Q Consensus 277 kD~~d-I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~---~i~IIaK-----IE--t~~aveNldeIl~~sDGImI 345 (506)
.|.+. |+.+.+.|++.++++- .+.++...+.++.++... .+...+- +. +.+.++.+++.++....+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 35554 5678899999887764 467777777777765432 1222221 11 22345556665544334445
Q ss_pred cCCCcccCCCCC-cHHHHH----HHHHHHHHHcCCcEEEEe
Q 010610 346 ARGDLGAELPIE-EVPLLQ----EEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 346 aRGDLgvelg~e-~V~~~Q----k~II~~c~~~GkPvivAT 381 (506)
|..|.+.... .-...| +..++.|++.|+||++.+
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~ 134 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHE 134 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 5555555332 123445 456788999999999986
No 254
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=53.14 E-value=57 Score=32.12 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=53.6
Q ss_pred CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHhCcceeEeec
Q 010610 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGADAVMLSG 416 (506)
Q Consensus 340 sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~dG~D~vmLs~ 416 (506)
+||+++. |-- +..+..++-..+.+..++.++.+..|||.-| ...+-.|.-+ .-.+-..|+|++|+..
T Consensus 42 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 42 IDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp CCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 7999984 211 1223333433444444444433358998875 2333445333 4457778999999974
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE 439 (506)
=--...-+-+.++....|+..+.
T Consensus 112 P~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 112 PYYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 44344445778889999988875
No 255
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=53.10 E-value=92 Score=30.92 Aligned_cols=118 Identities=10% Similarity=0.053 Sum_probs=70.8
Q ss_pred HHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhcccc
Q 010610 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATIT 443 (506)
Q Consensus 364 k~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~ 443 (506)
.-+...|+..|.++.+.. |..+....+...-..|++.+...++. .| -++++...+++++-+..++
T Consensus 85 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~ 149 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIITM-----------PESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNAVL 149 (334)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCEEE
Confidence 456778999999988762 22222234556677899988775431 23 4566666665544322222
Q ss_pred CCCCCCCCCcCcCCChHH---HHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 444 GGAMPPNLGQAFKNHMSE---MFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~---~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
.. .|. ++.. -....+.++.++++ . .||+.+-+|.|.--+++ ..|.+.|+++.+
T Consensus 150 i~-~~~--------np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~ 212 (334)
T 3tbh_A 150 AD-QFA--------TKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEP 212 (334)
T ss_dssp CC-TTT--------CHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred CC-ccC--------ChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEee
Confidence 11 111 1211 12234567777774 4 78999888888655554 489999999865
No 256
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=52.94 E-value=1.8e+02 Score=28.57 Aligned_cols=127 Identities=15% Similarity=0.031 Sum_probs=71.7
Q ss_pred cccCCCccCCCCCCccCHHHhHhhHhcCCcEEE-EccCCCHHHHHHHHHHHHhc-CC--CceEEEe--cCChhhhhhHHH
Q 010610 262 LNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA-VSFVKDAQVVHELKNYLKSC-GA--DIHVIVK--IESADSIPNLHS 335 (506)
Q Consensus 262 Vnlp~~~~~lp~ltekD~~dI~~al~~gvD~Ia-lSfV~saedV~~lr~~l~~~-~~--~i~IIaK--IEt~~aveNlde 335 (506)
+..|=..-++..++ +.+....+.+.|..++. ..+..+++++.+.-+.+++. +. .+.++.. +..+.--+.++.
T Consensus 14 ~~~Pii~apM~gvs--~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~ 91 (328)
T 2gjl_A 14 VEHPIMQGGMQWVG--RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAA 91 (328)
T ss_dssp CSSSEEECCCTTTC--SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHH
T ss_pred CCCCEEECCCCCCC--cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHH
Confidence 34443333444444 55666666677764444 44556687765544444332 22 2334442 002332344555
Q ss_pred HHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 336 IITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 336 Il~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
+++. +|+|.++-|+ | ..+++.++++|+|++... .+. .+...+...|+|++.+
T Consensus 92 ~~~~g~d~V~~~~g~-----p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 92 IIEAGIRVVETAGND-----P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHTTCCEEEEEESC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSEEEE
T ss_pred HHhcCCCEEEEcCCC-----c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCCCEEEE
Confidence 5555 7999987432 2 356777888899998532 122 2345688899999999
Q ss_pred ecc
Q 010610 415 SGE 417 (506)
Q Consensus 415 s~E 417 (506)
.+=
T Consensus 145 ~g~ 147 (328)
T 2gjl_A 145 DGF 147 (328)
T ss_dssp ECT
T ss_pred ECC
Confidence 653
No 257
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=52.81 E-value=1.1e+02 Score=30.58 Aligned_cols=116 Identities=12% Similarity=0.064 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.- |....-..+...-..|++.+... |.| -++.+...+++.+-. .++.
T Consensus 122 a~A~aa~~~G~~~~iv~-----------P~~~~~~k~~~~~~~GA~V~~v~-----~~~-~~~~~~a~~~~~~~~-~~~i 183 (366)
T 3iau_A 122 GVALAGQRLNCVAKIVM-----------PTTTPQIKIDAVRALGGDVVLYG-----KTF-DEAQTHALELSEKDG-LKYI 183 (366)
T ss_dssp HHHHHHHHTTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHHHT-CEEC
T ss_pred HHHHHHHHhCCceEEEe-----------CCCCCHHHHHHHHHCCCeEEEEC-----cCH-HHHHHHHHHHHHhcC-CEec
Confidence 45567999999988762 33222234566777899866653 344 477777766665432 2111
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcCc--eEEEEcCChHHHHHHH----hhCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT--SIVVFTRTGFMAILLS----HYRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a--~Iiv~T~sG~tA~~lS----~~RP~~pIia~T~ 505 (506)
. .|.+ + .........+.++.++++. .|++.+-+|.|.--++ .+.|.+.|+++.+
T Consensus 184 ~-~~~n-----~-~~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~ 243 (366)
T 3iau_A 184 P-PFDD-----P-GVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEP 243 (366)
T ss_dssp C-SSSS-----H-HHHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred C-CCCC-----h-HHHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEee
Confidence 1 1111 0 1112233345677777765 7888988888765544 4478899999865
No 258
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=52.75 E-value=1.3e+02 Score=28.77 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=48.3
Q ss_pred HHHhHhhHhcCCcEEEE--ccCC---CH-----------------HHHHHHHHHHHhcCCCceEEEec-CCh---hhhhh
Q 010610 279 WDDIKFGVDNKVDFYAV--SFVK---DA-----------------QVVHELKNYLKSCGADIHVIVKI-ESA---DSIPN 332 (506)
Q Consensus 279 ~~dI~~al~~gvD~Ial--SfV~---sa-----------------edV~~lr~~l~~~~~~i~IIaKI-Et~---~aveN 332 (506)
.+.++...+.|+|+|-+ ||.. +. +..-++.+.+++.+.+++++... .++ -++++
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~ 113 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDA 113 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHH
Confidence 44455566789998655 5531 11 11112223333333345666643 332 12333
Q ss_pred H-HHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEE
Q 010610 333 L-HSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 333 l-deIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPviv 379 (506)
+ ++..+. +||+++. |+. .++ .+..+..|+++|...+.
T Consensus 114 ~~~~~~~aGadgii~~--d~~----~e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 114 FYARCEQVGVDSVLVA--DVP----VEE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp HHHHHHHHTCCEEEET--TCC----GGG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEEc--CCC----HHH----HHHHHHHHHHcCCcEEE
Confidence 3 333333 7999994 443 333 35677889999987654
No 259
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=52.74 E-value=94 Score=30.24 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=55.6
Q ss_pred HHhHhhHhcCCcEEEEc------cCCCHHHHHHH-HHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHEL-KNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 280 ~dI~~al~~gvD~IalS------fV~saedV~~l-r~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRG 348 (506)
+.++|.++.|+|+|.+. +--|.++=.++ +...+..+. ||+-+= |.++++.....-+. +|++|+-+-
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 34567889999999862 33444444444 444444443 888764 46777666666555 899999754
Q ss_pred CcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 349 DLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 349 DLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.+.--.+.+.+. +..-.-|.+.+.|+++.
T Consensus 100 ~y~~~~s~~~l~---~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 100 YYFPRLSERQIA---KYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp CSSTTCCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred cCCCCCCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 432101112233 33334456668999875
No 260
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=52.60 E-value=56 Score=33.06 Aligned_cols=149 Identities=15% Similarity=0.113 Sum_probs=83.2
Q ss_pred cCHHHhHhhHhcCCcE--EEEccCCCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh--C--CEEEEcCCC
Q 010610 277 KDWDDIKFGVDNKVDF--YAVSFVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA--S--DGAMVARGD 349 (506)
Q Consensus 277 kD~~dI~~al~~gvD~--IalSfV~saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~--s--DGImIaRGD 349 (506)
.|.+-++.+++.|++. +.-|.-.. ....+-..+.+.|. .++++ ..+.+-+..+-+.+.. . +-|++.||=
T Consensus 142 ~~~eV~eaAleagag~~~lINsv~~~--~~~~m~~laa~~g~--~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg~ 217 (323)
T 4djd_D 142 KDHEVLEAVAEAAAGENLLLGNAEQE--NYKSLTAACMVHKH--NIIARSPLDINICKQLNILINEMNLPLDHIVIDPSI 217 (323)
T ss_dssp HHHHHHHHHHHHTTTSCCEEEEEBTT--BCHHHHHHHHHHTC--EEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCC
T ss_pred CCHHHHHHHHHhcCCCCCeEEECCcc--cHHHHHHHHHHhCC--eEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCCC
Confidence 4677888888888662 33332221 11233333333333 34443 2222233333333333 2 458888887
Q ss_pred cccCCCCCcHHHHHHHHHHHH----HHcCCcEEEEehhhhhhhcC-------------CCCChh---hcccHHHHHHhCc
Q 010610 350 LGAELPIEEVPLLQEEIIRTC----RSMGKAVIVATNMLESMIVH-------------PTPTRA---EVSDIAIAVREGA 409 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c----~~~GkPvivATqmLeSMi~~-------------~~PtRA---Ev~Dvanav~dG~ 409 (506)
....-+.+.-....++|=+.+ +..|.|+++.+ --+||+.. +...|. |+.-.+.++.-|+
T Consensus 218 g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~Gv-Srksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~~ 296 (323)
T 4djd_D 218 GGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTV-GYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAGA 296 (323)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEH-HHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEec-chhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhcC
Confidence 655555565556666655432 46899999863 12344433 111122 3444566888999
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHH
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~a 438 (506)
|.++|. +| ++|+++++++...
T Consensus 297 ~i~v~~-------~p-~~~~~~~~~~~~l 317 (323)
T 4djd_D 297 HILLMR-------HP-EAVARVKENIDQL 317 (323)
T ss_dssp SEEEEC-------CH-HHHHHHHHHHHHH
T ss_pred CEEEEc-------CH-HHHHHHHHHHHHH
Confidence 999995 67 8999998887543
No 261
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=52.44 E-value=88 Score=31.42 Aligned_cols=121 Identities=15% Similarity=0.219 Sum_probs=62.3
Q ss_pred HHhHhhHhcCCcEEEEcc----------------CCCHHHHHHHHHHHHhcCCCceEEEecCC----hhhhhhHHHHH--
Q 010610 280 DDIKFGVDNKVDFYAVSF----------------VKDAQVVHELKNYLKSCGADIHVIVKIES----ADSIPNLHSII-- 337 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSf----------------V~saedV~~lr~~l~~~~~~i~IIaKIEt----~~aveNldeIl-- 337 (506)
+..+.+.+.|+|+|-+.+ .++++.+.++.+.+.+.- +++|..||-. ....++..+++
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHHH
Confidence 334566788999987765 345555666655554432 5778888741 11112233333
Q ss_pred --Hh-CCEEEEcCCCc--ccCCCCC--cHHHHHHHHHHHHH-Hc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhC
Q 010610 338 --TA-SDGAMVARGDL--GAELPIE--EVPLLQEEIIRTCR-SM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (506)
Q Consensus 338 --~~-sDGImIaRGDL--gvelg~e--~V~~~Qk~II~~c~-~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG 408 (506)
+. +|+|.|--+.- |.. |.. ..+...-..+...+ .. +.|||....+ -|.. |+..++. |
T Consensus 153 l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI---------~s~e---da~~~l~-G 218 (350)
T 3b0p_A 153 MAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNGGI---------RSLE---EALFHLK-R 218 (350)
T ss_dssp HHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSC---------CSHH---HHHHHHT-T
T ss_pred HHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEECCc---------CCHH---HHHHHHh-C
Confidence 23 79998864321 111 100 00001112333333 34 7899976532 2332 4455555 9
Q ss_pred cceeEee
Q 010610 409 ADAVMLS 415 (506)
Q Consensus 409 ~D~vmLs 415 (506)
+|+||+.
T Consensus 219 aD~V~iG 225 (350)
T 3b0p_A 219 VDGVMLG 225 (350)
T ss_dssp SSEEEEC
T ss_pred CCEEEEC
Confidence 9999984
No 262
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=52.11 E-value=89 Score=31.10 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=70.7
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |.......+...-..|++.+...++. .| -++.+...+++++....++.
T Consensus 92 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAM-----------PSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 46677899999998863 22222234556777899987765321 23 36776666665543322011
Q ss_pred CCCCCCCCcCcCCChH--HH-HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMS--EM-FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~--~~-ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
...|. ++. .+ ....+ ++.++++ . .||+.+-+|.++--+++ ..|...|+++.+
T Consensus 157 ~~~~~--------n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~ 218 (343)
T 2pqm_A 157 ANQFG--------NPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEP 218 (343)
T ss_dssp CCTTT--------CHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCCC--------ChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEec
Confidence 11111 121 11 33344 8888875 4 78999999998766654 479999999875
No 263
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=52.05 E-value=1.5e+02 Score=28.80 Aligned_cols=116 Identities=12% Similarity=0.141 Sum_probs=68.9
Q ss_pred HHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCC
Q 010610 366 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGG 445 (506)
Q Consensus 366 II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~ 445 (506)
+...|+..|.++.+.. |.......+...-..|++.+....+. .| -++++...+++.+....++ .
T Consensus 82 lA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~~-~ 145 (313)
T 2q3b_A 82 LAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQRYFV-P 145 (313)
T ss_dssp HHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEC-C
T ss_pred HHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCEEe-C
Confidence 5677899999988762 22111223555667899987765421 23 3566666666544322111 1
Q ss_pred CCCCCCCcCcCCChHH--H-HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 446 AMPPNLGQAFKNHMSE--M-FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 446 ~~~~~~~~~~~~~~~~--~-ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
..| . ++.. . ....+.++.++++ . .|++.+-+|.|+--+++ ..|...|+++.+
T Consensus 146 ~~~-------~-n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~ 207 (313)
T 2q3b_A 146 QQF-------E-NPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEP 207 (313)
T ss_dssp CTT-------T-CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCC-------C-ChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEee
Confidence 111 1 1211 2 2233567777774 4 89999999998766554 469999999875
No 264
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=51.85 E-value=31 Score=33.77 Aligned_cols=64 Identities=13% Similarity=0.170 Sum_probs=48.2
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEcC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIaR 347 (506)
.+.++.+++.|+|+|.+.- -++++++++++.+.....+++|.+ -| -.+|+.++++. +|+|-++.
T Consensus 192 lee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 192 FEEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 4667788899999999987 468999988888865444555544 23 34788888887 89988874
No 265
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=51.85 E-value=73 Score=29.76 Aligned_cols=150 Identities=11% Similarity=0.013 Sum_probs=84.6
Q ss_pred ccCH-HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEE-e---cC------------ChhhhhhHHHHHH
Q 010610 276 EKDW-DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV-K---IE------------SADSIPNLHSIIT 338 (506)
Q Consensus 276 ekD~-~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIa-K---IE------------t~~aveNldeIl~ 338 (506)
+.+. +.++.+.+.|.|+|=+.+- ...++.++++.+++.|-.+..+. - .. ..++++.+...++
T Consensus 22 ~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~ 100 (269)
T 3ngf_A 22 EVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALH 100 (269)
T ss_dssp TSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHH
Confidence 3344 4567888999999988763 34578999999998876654332 1 10 1235566666665
Q ss_pred h-----CCEEEEcCCCcccCCC----CCcHHHHHHHHHHHHHHcCCcEEEEehhhhh--hhcCCCCChhhcccHHHHHHh
Q 010610 339 A-----SDGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLES--MIVHPTPTRAEVSDIAIAVRE 407 (506)
Q Consensus 339 ~-----sDGImIaRGDLgvelg----~e~V~~~Qk~II~~c~~~GkPvivATqmLeS--Mi~~~~PtRAEv~Dvanav~d 407 (506)
. ++.|.+..| ..-... ++.+...-+++...|.+.|..+.+=+ +.. +-.+...|-.++.++...+
T Consensus 101 ~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~n~~~~~~~~~~~~~~~~~l~~~v-- 175 (269)
T 3ngf_A 101 YALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP--LNTRNMPGYFIVHQLEAVGLVKRV-- 175 (269)
T ss_dssp HHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC--CCTTTSTTBSCCCHHHHHHHHHHH--
T ss_pred HHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee--CCcccCccchhcCHHHHHHHHHHh--
Confidence 4 577887777 322222 22455566778888888898766432 110 0012233444444444444
Q ss_pred CcceeEeecccc----CCCCHHHHHHHH
Q 010610 408 GADAVMLSGETA----HGKFPLKAVKVM 431 (506)
Q Consensus 408 G~D~vmLs~ETA----~G~yPveaV~~m 431 (506)
|.+.+-+.-+|. .|..|.+.++.+
T Consensus 176 ~~~~vg~~~D~~h~~~~g~d~~~~l~~~ 203 (269)
T 3ngf_A 176 NRPNVAVQLDLYHAQIMDGDLTRLIEKM 203 (269)
T ss_dssp CCTTEEEEEEHHHHHHHTCCHHHHHHHT
T ss_pred CCCCCCeEEEhhhHHhhCCCHHHHHHHh
Confidence 233343433432 355676665533
No 266
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=51.80 E-value=66 Score=32.47 Aligned_cols=129 Identities=17% Similarity=0.178 Sum_probs=67.7
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEc---------cCCC----------------HHHHHHHHHHHH-hcCCCc
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVS---------FVKD----------------AQVVHELKNYLK-SCGADI 318 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalS---------fV~s----------------aedV~~lr~~l~-~~~~~i 318 (506)
.||..|++.+ +.+.+.|+|+|=+- |... ..-+.++.+.++ ..|.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 6788777776 35678999999876 3221 111233333333 346677
Q ss_pred eEEEecCChh------hhhhHHHHHHh----CCEEEEcCCCcccC-CCCCcHHHHHHHHHHHH-HHcCCcEEEEehhhhh
Q 010610 319 HVIVKIESAD------SIPNLHSIITA----SDGAMVARGDLGAE-LPIEEVPLLQEEIIRTC-RSMGKAVIVATNMLES 386 (506)
Q Consensus 319 ~IIaKIEt~~------aveNldeIl~~----sDGImIaRGDLgve-lg~e~V~~~Qk~II~~c-~~~GkPvivATqmLeS 386 (506)
.|..||---+ .+++.-++++. +|.|=+.-|...-. ++.. +..+-..++.. +..++|||....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi--- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLY--PGYQVKYAETIKKRCNIKTSAVGLI--- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCEEEEESSC---
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeeccc--CceeehHHHHHHHhcCcccceeeee---
Confidence 8888875321 12333333332 78888854433211 1110 11122222222 2347998876432
Q ss_pred hhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 387 Mi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
-+. .+...++..| +|+|++.
T Consensus 287 ------~t~---e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 ------TTQ---ELAEEILSNERADLVALG 307 (343)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEES
T ss_pred ------eHH---HHHHHHHhchhhHHHHHH
Confidence 122 2345677888 9999985
No 267
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=51.74 E-value=1.9e+02 Score=28.58 Aligned_cols=144 Identities=8% Similarity=-0.004 Sum_probs=75.8
Q ss_pred HhHhhHhcCCcEEEE-ccCCC----H---HHHHHHHHHHHhcCCCceEEE-----ecCChhhh-hhHHHHHH---h--CC
Q 010610 281 DIKFGVDNKVDFYAV-SFVKD----A---QVVHELKNYLKSCGADIHVIV-----KIESADSI-PNLHSIIT---A--SD 341 (506)
Q Consensus 281 dI~~al~~gvD~Ial-SfV~s----a---edV~~lr~~l~~~~~~i~IIa-----KIEt~~av-eNldeIl~---~--sD 341 (506)
.++.+++.|+|+|-+ -|.++ . +.+.++.+.+.+.|..+.+.. .+.+...- +.+.+-+. . +|
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred hHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 355678899999863 22332 2 344455555555444322221 23221111 22222111 1 57
Q ss_pred EEEEcCC-CcccCCCCCcHHHHHHHHHHHHHH-cCCc-EEEEehhhhhhhcCCCCChhh-cccHHHHHHhCcceeEeecc
Q 010610 342 GAMVARG-DLGAELPIEEVPLLQEEIIRTCRS-MGKA-VIVATNMLESMIVHPTPTRAE-VSDIAIAVREGADAVMLSGE 417 (506)
Q Consensus 342 GImIaRG-DLgvelg~e~V~~~Qk~II~~c~~-~GkP-vivATqmLeSMi~~~~PtRAE-v~Dvanav~dG~D~vmLs~E 417 (506)
.+=+..+ | + .... ...+++++.... .+.| |+++.- ++..+ ...+..++..|++++..-.-
T Consensus 193 ~iKv~~~~~-~----~g~~-~~~~~vv~~~~~~~~~P~Vv~aGG----------~~~~~~~~~~~~a~~aGa~Gv~vGRa 256 (304)
T 1to3_A 193 LYKVEMPLY-G----KGAR-SDLLTASQRLNGHINMPWVILSSG----------VDEKLFPRAVRVAMEAGASGFLAGRA 256 (304)
T ss_dssp EEEECCGGG-G----CSCH-HHHHHHHHHHHHTCCSCEEECCTT----------SCTTTHHHHHHHHHHTTCCEEEESHH
T ss_pred EEEeCCCcC-C----CCCH-HHHHHHHHhccccCCCCeEEEecC----------CCHHHHHHHHHHHHHcCCeEEEEehH
Confidence 6656552 2 1 1111 222333333222 5889 777642 22222 23467778889999987555
Q ss_pred ccCC----CCHHHHH--------HHHHHHHHHHhc
Q 010610 418 TAHG----KFPLKAV--------KVMHTVSLRTEA 440 (506)
Q Consensus 418 TA~G----~yPveaV--------~~m~~I~~~aE~ 440 (506)
+-.- +-|.+++ +.+++|+.+...
T Consensus 257 I~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~ 291 (304)
T 1to3_A 257 VWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMG 291 (304)
T ss_dssp HHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCC
Confidence 5545 8899999 888888877554
No 268
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=51.73 E-value=16 Score=38.47 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=55.7
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCH---------------------HHHHHHHHHHHhcCCCceEEE--ecCCh
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDA---------------------QVVHELKNYLKSCGADIHVIV--KIESA 327 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~sa---------------------edV~~lr~~l~~~~~~i~IIa--KIEt~ 327 (506)
|.+++.|..++ +.+.+.|+|+|.++--... ..+..++++-+..+.+++||+ -|.|.
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~ 385 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 385 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCH
Confidence 33555555555 4567899999998863210 012333333333345788888 57776
Q ss_pred hhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCC
Q 010610 328 DSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (506)
Q Consensus 328 ~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~Gk 375 (506)
+-. .+-|..=+|+|+++|+=|.- +..-+..+.+.+-....+.|.
T Consensus 386 ~DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 386 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp HHH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 544 23333338999999985521 223344444445444555553
No 269
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=51.68 E-value=33 Score=34.45 Aligned_cols=54 Identities=24% Similarity=0.385 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHhCCcEEEEeCCCCCh---------HHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 121 NTREMIWKLAEAGMNVARLNMSHGDH---------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 121 ~~~e~i~~li~aGm~v~RiN~SHg~~---------e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
...+.++.|-+.|+|++||-++.... +.+.+.++.+=+...+.| +.+++|+-..
T Consensus 62 ~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G---i~vild~H~~ 124 (380)
T 1edg_A 62 TTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK---MYVILNTHHD 124 (380)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT---CEEEEECCSC
T ss_pred ccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC---CEEEEeCCCc
Confidence 46889999999999999998875421 222233333333344444 7889998764
No 270
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=51.61 E-value=1.9e+02 Score=28.56 Aligned_cols=147 Identities=16% Similarity=0.052 Sum_probs=79.7
Q ss_pred CccccCCCccCCCCCCccCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC-CceEEEecCChhhhhhHHHHHH
Q 010610 260 RHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIESADSIPNLHSIIT 338 (506)
Q Consensus 260 KgVnlp~~~~~lp~ltekD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~-~i~IIaKIEt~~aveNldeIl~ 338 (506)
.++..|=..-++..++ +.+....+.+.|.-++...---+++.+.+.-+.+++.-. ...+=.-+-++.--+.++.+++
T Consensus 23 l~~~~Pii~apM~gvs--~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~ 100 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG--TPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIE 100 (326)
T ss_dssp HTCSSSEEECCCTTTS--CHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHH
T ss_pred cCCCCCEEECCCCCCC--CHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHH
Confidence 3445554444555443 556666667778755543333367776655554544322 1122122334433344444444
Q ss_pred h-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeecc
Q 010610 339 A-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGE 417 (506)
Q Consensus 339 ~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~E 417 (506)
. +|.|.++-|+ | ..+++.+++.|.+++... .+. .+...+...|+|++.+.+=
T Consensus 101 ~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 101 EKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGADAVIAEGM 153 (326)
T ss_dssp TTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEECT
T ss_pred CCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCCEEEEECC
Confidence 4 7999987552 2 245677788899998642 122 2345677889999999652
Q ss_pred cc---CCCCHHHHHHHHHHHHHH
Q 010610 418 TA---HGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 418 TA---~G~yPveaV~~m~~I~~~ 437 (506)
.+ .|..+ ....+..+...
T Consensus 154 ~~GG~~G~~~--~~~ll~~i~~~ 174 (326)
T 3bo9_A 154 ESGGHIGEVT--TFVLVNKVSRS 174 (326)
T ss_dssp TSSEECCSSC--HHHHHHHHHHH
T ss_pred CCCccCCCcc--HHHHHHHHHHH
Confidence 22 23222 44555555443
No 271
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=51.12 E-value=19 Score=34.53 Aligned_cols=53 Identities=13% Similarity=0.170 Sum_probs=35.2
Q ss_pred CCHHHHHHHH-HhCCcEEEEeCCCC-------ChHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 121 NTREMIWKLA-EAGMNVARLNMSHG-------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 121 ~~~e~i~~li-~aGm~v~RiN~SHg-------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
-+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND---MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 3678999999 79999999987642 23333444444444455556 677888743
No 272
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=50.97 E-value=1.3e+02 Score=28.85 Aligned_cols=94 Identities=22% Similarity=0.233 Sum_probs=56.4
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcc
Q 010610 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGAD 410 (506)
Q Consensus 332 NldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D 410 (506)
.+..+.+. +|.|+.-.++.|..-+... +...+++. +...+|+++... +-|. .|+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~gG---------I~t~---eda~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVDAG---------IGSP---KDAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEESC---------CCSH---HHHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEEeC---------CCCH---HHHHHHHHcCCC
Confidence 34444444 6777543455554433333 22233332 245789987632 2222 357888999999
Q ss_pred eeEeeccccCCCCHHHHHHHHHHHHHHHhcc
Q 010610 411 AVMLSGETAHGKFPLKAVKVMHTVSLRTEAT 441 (506)
Q Consensus 411 ~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~ 441 (506)
+++...--.....|.++++.+.+.++.....
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~~~ 233 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGRLS 233 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 9998654334456999999888887766544
No 273
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=50.82 E-value=62 Score=31.33 Aligned_cols=133 Identities=19% Similarity=0.215 Sum_probs=76.7
Q ss_pred hHhhHhcCCcEEE--Ecc---CCCHHHHHHHHHHHHhcCCCceEEEecCCh------------hhhhhHHHHHHh--CCE
Q 010610 282 IKFGVDNKVDFYA--VSF---VKDAQVVHELKNYLKSCGADIHVIVKIESA------------DSIPNLHSIITA--SDG 342 (506)
Q Consensus 282 I~~al~~gvD~Ia--lSf---V~saedV~~lr~~l~~~~~~i~IIaKIEt~------------~aveNldeIl~~--sDG 342 (506)
++.+.+.|+|.|= +=| ..+.+++.+....+++.-.++++|.-+-+. +-++-+...++. +|.
T Consensus 38 ~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~ 117 (257)
T 2yr1_A 38 AEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDL 117 (257)
T ss_dssp HHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSE
T ss_pred HHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCE
Confidence 3445667888763 222 334555655545554433356788766543 112233444442 454
Q ss_pred EEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccccCC
Q 010610 343 AMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAHG 421 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ETA~G 421 (506)
|=| |+-..+ ..+++++.+++.|..+|.+-+-+ +..|+..|+...++ +...|+|.+=+.. .-
T Consensus 118 iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~~~~~gaDivKia~---~a 179 (257)
T 2yr1_A 118 VDY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYF-----DGTPRKETLLADMRQAERYGADIAKVAV---MP 179 (257)
T ss_dssp EEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEEEE---CC
T ss_pred EEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCC-----CCCcCHHHHHHHHHHHHhcCCCEEEEEe---cc
Confidence 433 444333 66788899999999999886544 34787777655544 6778999876642 22
Q ss_pred CCHHHHHHHHH
Q 010610 422 KFPLKAVKVMH 432 (506)
Q Consensus 422 ~yPveaV~~m~ 432 (506)
+-+.+....++
T Consensus 180 ~s~~D~l~ll~ 190 (257)
T 2yr1_A 180 KSPEDVLVLLQ 190 (257)
T ss_dssp SSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 23445555444
No 274
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=50.75 E-value=70 Score=29.82 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=41.9
Q ss_pred CHHHh-HhhHhcCCcEEEEc-----cCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 278 DWDDI-KFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 278 D~~dI-~~al~~gvD~IalS-----fV~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIaRG 348 (506)
|..++ +...+.|+|+|.+. |.....+...++++.+. .++++++ .|.++ +.+++.++. +|+|++++.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ--IDIPFTVGGGIHDF---ETASELILRGADKVSINTA 105 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh--CCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChH
Confidence 54443 45568899998775 33333445555554432 3466666 47665 446666666 899999877
Q ss_pred Cc
Q 010610 349 DL 350 (506)
Q Consensus 349 DL 350 (506)
.|
T Consensus 106 ~l 107 (253)
T 1thf_D 106 AV 107 (253)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 275
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=50.67 E-value=26 Score=35.43 Aligned_cols=54 Identities=15% Similarity=0.281 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHhCCcEEEEeCCCCC-------h-HHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 121 NTREMIWKLAEAGMNVARLNMSHGD-------H-ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 121 ~~~e~i~~li~aGm~v~RiN~SHg~-------~-e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
.+++.++.|.+.|+|++||-++... . +...+.++.+=+...+.| +.+++||-.-
T Consensus 53 ~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G---i~vIldlH~~ 114 (353)
T 3l55_A 53 TTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG---LYAIVNVHHD 114 (353)
T ss_dssp CCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---CEEEEECCTT
T ss_pred CCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 3689999999999999999997532 1 223333333333344455 7889998653
No 276
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=50.54 E-value=1.7e+02 Score=31.27 Aligned_cols=115 Identities=12% Similarity=0.029 Sum_probs=69.5
Q ss_pred HHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCC
Q 010610 366 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGG 445 (506)
Q Consensus 366 II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~ 445 (506)
+...|+..|.++.+.. |...-...+...-..|++.++. |...-++.+...+++++-...+.
T Consensus 94 vA~aa~~lGi~~~Ivm-----------P~~~p~~Kv~~~r~~GAeVvlv------~~~~dda~~~a~ela~e~g~~~v-- 154 (514)
T 1tdj_A 94 VAFSSARLGVKALIVM-----------PTATADIKVDAVRGFGGEVLLH------GANFDEAKAKAIELSQQQGFTWV-- 154 (514)
T ss_dssp HHHHHHHTTCCEEEEC-----------CSSCCHHHHHHHHHHSCEEECC------CSSHHHHHHHHHHHHHHHCCEEC--
T ss_pred HHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEE------CCCHHHHHHHHHHHHHhcCCEee--
Confidence 5567889999998762 2222223456666789986653 22345777777776655322111
Q ss_pred CCCCCCCcCcCCChHHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 446 AMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 446 ~~~~~~~~~~~~~~~~~ia~~av~~A~~~~-a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
..|.+ ......-..-+.++.++++ . .|+|.+-+|.++--+++ .+|.+.|+++.+
T Consensus 155 ~pfdn------p~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep 214 (514)
T 1tdj_A 155 PPFDH------PMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA 214 (514)
T ss_dssp CSSCC------HHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCCC------HHHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 11111 0111222223567777776 4 89999988988666555 489999999976
No 277
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=50.32 E-value=43 Score=32.06 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=59.4
Q ss_pred hhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHH
Q 010610 284 FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLL 362 (506)
Q Consensus 284 ~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~ 362 (506)
..++.|++.|=++| +++.-.+.++.+-++. .+..|-+ -|.--.+..++.+++ +|-| +.|+ .
T Consensus 33 al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fi-vsP~-------------~ 94 (217)
T 3lab_A 33 ALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFI-VSPG-------------L 94 (217)
T ss_dssp HHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEE-EESS-------------C
T ss_pred HHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEE-EeCC-------------C
Confidence 44567777777776 4455555555443333 2333333 244444555555554 4444 3443 2
Q ss_pred HHHHHHHHHHcCC------cEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 363 QEEIIRTCRSMGK------AVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 363 Qk~II~~c~~~Gk------PvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
-.++++.|+++|. |++=-. -| .+++..|...|+|.+-+-
T Consensus 95 ~~evi~~~~~~~v~~~~~~~~~PG~-----------~T---ptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 95 TPELIEKAKQVKLDGQWQGVFLPGV-----------AT---ASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp CHHHHHHHHHHHHHCSCCCEEEEEE-----------CS---HHHHHHHHHTTCCEEEET
T ss_pred cHHHHHHHHHcCCCccCCCeEeCCC-----------CC---HHHHHHHHHcCCCEEEEC
Confidence 4578899999999 876321 12 234789999999999774
No 278
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=50.31 E-value=91 Score=30.42 Aligned_cols=96 Identities=11% Similarity=0.000 Sum_probs=56.7
Q ss_pred HHhHhhHhcCCcEEEE------ccCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 280 ~dI~~al~~gvD~Ial------SfV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
+.++|.++.|+|+|.+ ++--|.++=.++-+...+.-.. ||+-+= |.++++.....-+. +||+|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 3456788999999987 3444555555554444333223 888764 46667666665554 8999997554
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.--...+.+. +..-.-|.+.+.|+++-
T Consensus 102 y~~~~s~~~l~---~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 102 YFPRLPEKFLA---KYYEEIARISSHSLYIY 129 (288)
T ss_dssp SSCSCCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCCCCCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 42201222333 33334466678999986
No 279
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=49.85 E-value=48 Score=33.59 Aligned_cols=129 Identities=13% Similarity=0.139 Sum_probs=67.2
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEccC-------------CC------------HHHHHHHHHHHHh-cCCCc
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KD------------AQVVHELKNYLKS-CGADI 318 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalSfV-------------~s------------aedV~~lr~~l~~-~~~~i 318 (506)
.||..|++.+ +.+.+.|+|+|=+-.- +. ..-+.++.+.+++ .+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6788787776 3567899999876532 11 1112333333333 35677
Q ss_pred eEEEecCC---h----hhhhhHHHHHHh-----CCEEEEcCCCcccC--CCCCcHHHHHHHHHHH-HHHcCCcEEEEehh
Q 010610 319 HVIVKIES---A----DSIPNLHSIITA-----SDGAMVARGDLGAE--LPIEEVPLLQEEIIRT-CRSMGKAVIVATNM 383 (506)
Q Consensus 319 ~IIaKIEt---~----~aveNldeIl~~-----sDGImIaRGDLgve--lg~e~V~~~Qk~II~~-c~~~GkPvivATqm 383 (506)
.|..||-- . ..++..-++++. .|.|-+.-|...-. ++... ..+...++. .+..+.|++....+
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEECSST
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEeCCC
Confidence 78888732 1 112332333322 68888875543221 11110 011122222 22347998876432
Q ss_pred hhhhhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 384 LESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 384 LeSMi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
-+. .+...++..| +|+|++.
T Consensus 305 ---------~s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 305 ---------GTP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp ---------TSH---HHHHHHHHTTSCSEEECC
T ss_pred ---------CCH---HHHHHHHHCCCccEEEec
Confidence 122 2355778888 9999985
No 280
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=49.40 E-value=1.4e+02 Score=28.86 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=81.6
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH--------hCCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT--------ASDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~--------~sDG 342 (506)
|..|+.|.+.+ +.+.++|++.|+++ +.-+..++++|+ +..+.|.+=|==|.|-...+.-+. -+|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 55566666554 67888999999885 566778888884 445666655544444433322221 1454
Q ss_pred EEEcCCCcccCCCC------CcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEee
Q 010610 343 AMVARGDLGAELPI------EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLS 415 (506)
Q Consensus 343 ImIaRGDLgvelg~------e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs 415 (506)
|=+ -+.++. +.+..-.+.+.++|...-.+||+-|-.| |..|+...+. +...|+|.|=-|
T Consensus 112 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 112 VDM-----VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEE-----EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEECC
Confidence 321 122222 2344444555566643334566655433 5566555544 467899998766
Q ss_pred ccccCCCCHHHHHHHHHHHH
Q 010610 416 GETAHGKFPLKAVKVMHTVS 435 (506)
Q Consensus 416 ~ETA~G~yPveaV~~m~~I~ 435 (506)
.==..|.=-++.|+.|++.+
T Consensus 178 TGf~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 178 TGFGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 11112223468999999876
No 281
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=49.31 E-value=1.1e+02 Score=30.25 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=85.1
Q ss_pred CCCCCccCHHHhHhhHhcCCcEEEEccC-------------CCHHHHHHHHHHHHhcCCCceEEEecCC-------hhhh
Q 010610 271 LPSITEKDWDDIKFGVDNKVDFYAVSFV-------------KDAQVVHELKNYLKSCGADIHVIVKIES-------ADSI 330 (506)
Q Consensus 271 lp~ltekD~~dI~~al~~gvD~IalSfV-------------~saedV~~lr~~l~~~~~~i~IIaKIEt-------~~av 330 (506)
+.-+|-+|.---+.+-+.|+|.|.+..- -+.+++...-+.+.+.-....|++=++- .+++
T Consensus 36 i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 36 WAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp EEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHH
Confidence 4455778887777778899999977520 1233333222333333445677776652 3567
Q ss_pred hhHHHHHHh--CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe----hh---hhhhhcCCCCChhh--cc
Q 010610 331 PNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT----NM---LESMIVHPTPTRAE--VS 399 (506)
Q Consensus 331 eNldeIl~~--sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT----qm---LeSMi~~~~PtRAE--v~ 399 (506)
+|.-.+++. +++|-+-=|+ .+...|+++.++|+||+-.- |- +....-..+..+++ +.
T Consensus 116 ~na~rl~~eaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~ 183 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIA 183 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG------------GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEECCcH------------HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHH
Confidence 888888874 7899886441 33455677788999987211 11 11111111111333 55
Q ss_pred cHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 400 DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 400 Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|.--+...|+|+++|=+ - |. +...+|.++..
T Consensus 184 rA~a~~eAGA~~ivlE~-----v-p~---~~a~~it~~l~ 214 (281)
T 1oy0_A 184 DAIAVAEAGAFAVVMEM-----V-PA---ELATQITGKLT 214 (281)
T ss_dssp HHHHHHHHTCSEEEEES-----C-CH---HHHHHHHHHCS
T ss_pred HHHHHHHcCCcEEEEec-----C-CH---HHHHHHHHhCC
Confidence 66667888999999942 1 32 23456666554
No 282
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=49.25 E-value=16 Score=39.62 Aligned_cols=51 Identities=25% Similarity=0.408 Sum_probs=42.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 108 r~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
.+-.+-+.+|-.-++.|-+..|+++|+|++=|..+||..+...++++.+|+
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 345567778876677899999999999999999999998877777777775
No 283
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=49.23 E-value=90 Score=31.42 Aligned_cols=117 Identities=13% Similarity=0.082 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |..+....+...-..|++.+... |.| -++.+...+++++....++.
T Consensus 107 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~-----~~~-~~a~~~a~~l~~~~~~~~~~ 169 (364)
T 4h27_A 107 AAAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATVKVVG-----ELL-DEAFELAKALAKNNPGWVYI 169 (364)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHTTTCEEEEEC-----SST-THHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHhCCceEEEE-----------CCCCCHHHHHHHHHcCCEEEEEC-----CCH-HHHHHHHHHHHHhCCCeEEe
Confidence 46677999999998762 22222223555566799876663 234 36777777766543122221
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hC-CCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YR-PSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~R-P~~pIia~T~ 505 (506)
.+ |.+ ....+.-...+.++.++++ . .||+.+-+|.|.--+++ +. |.++|+++-+
T Consensus 170 ~~-~~n------p~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~ 231 (364)
T 4h27_A 170 PP-FDD------PLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMET 231 (364)
T ss_dssp CS-SCS------HHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred CC-CCC------HHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 11 111 0111222234567777775 4 78999989888655543 33 8899999865
No 284
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=49.15 E-value=87 Score=31.11 Aligned_cols=154 Identities=15% Similarity=0.139 Sum_probs=84.8
Q ss_pred hhhhhHHHHHH----hCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH
Q 010610 328 DSIPNLHSIIT----ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI 403 (506)
Q Consensus 328 ~aveNldeIl~----~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan 403 (506)
.+++++++.+. -+|+|++-+|=+. ...+. ..++|.|+....-+|+... .+...-...+-.
T Consensus 70 ~gl~~~~~~i~~l~~g~dav~~~~G~~~-------------~~~~~--~~~~~lil~l~~~t~~~~~-~~~~~l~~~ve~ 133 (295)
T 3glc_A 70 TGLERIDINIAPLFEHADVLMCTRGILR-------------SVVPP--ATNRPVVLRASGANSILAE-LSNEAVALSMDD 133 (295)
T ss_dssp TTCTTHHHHTGGGGGGCSEEEECHHHHH-------------HHSCG--GGCCCEEEECEECCCTTSC-TTCCEECSCHHH
T ss_pred CchhhhHHHHHHhhcCCCEEEECHhHHh-------------hhccc--cCCccEEEEEcCCCcCCCC-CccchhHHHHHH
Confidence 46677665554 2799998644322 11111 2478888865444444221 222333567899
Q ss_pred HHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhcc-ccCCCCCC-CCCcCcCCChHHHHHHHHHHHHhhcCceEEEE
Q 010610 404 AVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT-ITGGAMPP-NLGQAFKNHMSEMFAYHATMMSNTLGTSIVVF 481 (506)
Q Consensus 404 av~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~-~~~~~~~~-~~~~~~~~~~~~~ia~~av~~A~~~~a~Iiv~ 481 (506)
++..|+|+|-+..=.- ..+.-+.++.+.+++.+++.+ +.. +.. ....... ...+.++ .++++|.++||-+|-.
T Consensus 134 Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~Glpv--Iie~~~G~~~~-~d~e~i~-~aariA~elGAD~VKt 208 (295)
T 3glc_A 134 AVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMPT--MAVTGVGKDMV-RDQRYFS-LATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCCE--EEEECC----C-CSHHHHH-HHHHHHHHTTCSEEEE
T ss_pred HHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCEE--EEECCCCCccC-CCHHHHH-HHHHHHHHhCCCEEEe
Confidence 9999999998753222 334567888888888888754 110 000 0011111 1234444 4678999999944443
Q ss_pred cCChHHHHHHHhhCCCCeEEEE
Q 010610 482 TRTGFMAILLSHYRPSGTIFAF 503 (506)
Q Consensus 482 T~sG~tA~~lS~~RP~~pIia~ 503 (506)
+.+|.+-+.+...- ++||++.
T Consensus 209 ~~t~e~~~~vv~~~-~vPVv~~ 229 (295)
T 3glc_A 209 YYVEKGFERIVAGC-PVPIVIA 229 (295)
T ss_dssp ECCTTTHHHHHHTC-SSCEEEE
T ss_pred CCCHHHHHHHHHhC-CCcEEEE
Confidence 34444444444333 4788763
No 285
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=49.10 E-value=1.3e+02 Score=29.39 Aligned_cols=120 Identities=12% Similarity=0.061 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |.......+...-..|++.+...++ +.| -++.+...+++.+....++.
T Consensus 81 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~~~~~~~~~~~i 145 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIITM-----------PASMSTERRIILLAFGVELVLTDPA---KGM-KGAIAKAEEILAKTPNGYML 145 (322)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGG---GHH-HHHHHHHHHHHHHCTTEEEC
T ss_pred HHHHHHHHcCCCEEEEe-----------CCCCCHHHHHHHHHcCCEEEEeCCC---CCH-HHHHHHHHHHHHhCCCeEeC
Confidence 35667899999998762 2222223355667789997765432 112 35777666665544222221
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
. .|.+ +..+..-....+.++.++++ . .|++.+-+|.|.--+++ ..|.+.|+++.+
T Consensus 146 ~-~~~n-----~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 207 (322)
T 1z7w_A 146 Q-QFEN-----PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP 207 (322)
T ss_dssp C-TTTC-----THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred C-CCCC-----hhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEec
Confidence 1 1111 00111112223567777874 4 89999999998766554 479999999865
No 286
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=48.94 E-value=2.2e+02 Score=28.44 Aligned_cols=130 Identities=17% Similarity=0.182 Sum_probs=76.0
Q ss_pred HhHhhHhcCCcEEEEccCCCH---------------HHHHHHHHHHHhcCCCceEEEecCC-----hhhhhhHHHHHHh-
Q 010610 281 DIKFGVDNKVDFYAVSFVKDA---------------QVVHELKNYLKSCGADIHVIVKIES-----ADSIPNLHSIITA- 339 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~sa---------------edV~~lr~~l~~~~~~i~IIaKIEt-----~~aveNldeIl~~- 339 (506)
+++.+++.|+|.|.+.+--|. +.+.++.++.++.|.. +..-+|. ..-.+.+-++++.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLEDWSNGFRNSPDYVKSLVEHL 178 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEETHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCcCCHHHHHHHHHHH
Confidence 788999999999988764443 3344444555666655 4445555 2223333333332
Q ss_pred ----CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHH-c-CCcEEEEehhhhhhhcCCCCChhhcccHHH---HHHhCcc
Q 010610 340 ----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRS-M-GKAVIVATNMLESMIVHPTPTRAEVSDIAI---AVREGAD 410 (506)
Q Consensus 340 ----sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~-~-GkPvivATqmLeSMi~~~~PtRAEv~Dvan---av~dG~D 410 (506)
+|.|.++ |= .|. -.|..-.++++..++ . +.|+.+.++ | ..--| ++| |+..|+|
T Consensus 179 ~~~Ga~~i~l~--DT---~G~-~~P~~v~~lv~~l~~~~p~~~i~~H~H-------n-d~GlA----~AN~laAv~aGa~ 240 (337)
T 3ble_A 179 SKEHIERIFLP--DT---LGV-LSPEETFQGVDSLIQKYPDIHFEFHGH-------N-DYDLS----VANSLQAIRAGVK 240 (337)
T ss_dssp HTSCCSEEEEE--CT---TCC-CCHHHHHHHHHHHHHHCTTSCEEEECB-------C-TTSCH----HHHHHHHHHTTCS
T ss_pred HHcCCCEEEEe--cC---CCC-cCHHHHHHHHHHHHHhcCCCeEEEEec-------C-CcchH----HHHHHHHHHhCCC
Confidence 5777664 31 233 234444455555443 3 688888863 2 22222 444 7888998
Q ss_pred eeEee----ccccCCCCHHHHHHHH
Q 010610 411 AVMLS----GETAHGKFPLKAVKVM 431 (506)
Q Consensus 411 ~vmLs----~ETA~G~yPveaV~~m 431 (506)
.+=-| || ..|+=|.|.|-++
T Consensus 241 ~vd~tv~GlG~-~aGN~~~E~lv~~ 264 (337)
T 3ble_A 241 GLHASINGLGE-RAGNTPLEALVTT 264 (337)
T ss_dssp EEEEBGGGCSS-TTCBCBHHHHHHH
T ss_pred EEEEecccccc-cccchhHHHHHHH
Confidence 87533 56 6788888877644
No 287
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=48.61 E-value=71 Score=32.53 Aligned_cols=116 Identities=16% Similarity=0.120 Sum_probs=65.3
Q ss_pred hcCCcEEEEccC-----------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH------hCCEEEEc---
Q 010610 287 DNKVDFYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT------ASDGAMVA--- 346 (506)
Q Consensus 287 ~~gvD~IalSfV-----------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~------~sDGImIa--- 346 (506)
+.|+|+|-+.+= .+++.+.++.+.+++. .+++|++||=---..+++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 358899877543 4566666666666543 35789999864333444555554 15777641
Q ss_pred -CC---Cc---------ccCCC-C--CcH-HHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhC
Q 010610 347 -RG---DL---------GAELP-I--EEV-PLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (506)
Q Consensus 347 -RG---DL---------gvelg-~--e~V-~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG 408 (506)
+| |+ ....+ + ..+ +...+.+-+..++. ..|+|....+. | ..|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~---------s---~~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY---------T---GEDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC---------S---HHHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC---------C---HHHHHHHHHcC
Confidence 11 10 00000 1 122 33444444444443 47888654322 2 34788899999
Q ss_pred cceeEee
Q 010610 409 ADAVMLS 415 (506)
Q Consensus 409 ~D~vmLs 415 (506)
+|+||+.
T Consensus 300 Ad~V~vg 306 (354)
T 4ef8_A 300 ASMVQVG 306 (354)
T ss_dssp EEEEEEC
T ss_pred CCEEEEh
Confidence 9999985
No 288
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=48.33 E-value=1.2e+02 Score=28.48 Aligned_cols=141 Identities=14% Similarity=0.180 Sum_probs=85.4
Q ss_pred HHhHhhHhcCCcEEEEccCC----CHHHHHHHHHHHHhcCCCceEEEe------cC----------------ChhhhhhH
Q 010610 280 DDIKFGVDNKVDFYAVSFVK----DAQVVHELKNYLKSCGADIHVIVK------IE----------------SADSIPNL 333 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~----saedV~~lr~~l~~~~~~i~IIaK------IE----------------t~~aveNl 333 (506)
+.++.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.+..+.- .- ..++++.+
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 104 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEM 104 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 45678889999999888643 477899999999998876655531 00 12456666
Q ss_pred HHHHHh-----CCEEEEcCCCcccC--CCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH
Q 010610 334 HSIITA-----SDGAMVARGDLGAE--LPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR 406 (506)
Q Consensus 334 deIl~~-----sDGImIaRGDLgve--lg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~ 406 (506)
...++. ++.|.+..|...-. -.++.+....+++...|+++|..+.+=+ +. -+..++.++...+.
T Consensus 105 ~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~-----~~----~~~~~~~~l~~~~~ 175 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLET-----GQ----ESADHLLEFIEDVN 175 (290)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEEC-----CS----SCHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEec-----CC----CCHHHHHHHHHhcC
Confidence 666665 57888765533211 1122456666788888999998877643 21 23444444444442
Q ss_pred hCcceeEeeccccC----C-CCHHHHHHHH
Q 010610 407 EGADAVMLSGETAH----G-KFPLKAVKVM 431 (506)
Q Consensus 407 dG~D~vmLs~ETA~----G-~yPveaV~~m 431 (506)
.+.+-+.-+|.. | .-|.+.++.+
T Consensus 176 --~~~~g~~~D~~h~~~~g~~d~~~~l~~~ 203 (290)
T 3tva_A 176 --RPNLGINFDPANMILYGTGNPIEALRKV 203 (290)
T ss_dssp --CTTEEEEECHHHHHHTTCSCHHHHHHHH
T ss_pred --CCCEEEEeccHHHHHhCCCCHHHHHHHH
Confidence 333333334322 3 5676666554
No 289
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=48.20 E-value=2.4e+02 Score=28.70 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=0.0
Q ss_pred CHHHhHhhHhcCCcEEEEccCCCH--------------HHHHHHHHHHHhcCCCceEEEecCCh------hhhhhHHHHH
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKDA--------------QVVHELKNYLKSCGADIHVIVKIESA------DSIPNLHSII 337 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~sa--------------edV~~lr~~l~~~~~~i~IIaKIEt~------~aveNldeIl 337 (506)
..+||+.+++.|+|.|.+.+--|. +.+.+..+++++.|....+..-.|+. ..++-++++.
T Consensus 76 ~~~di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~ 155 (382)
T 2ztj_A 76 RLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVA 155 (382)
T ss_dssp CHHHHHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHG
T ss_pred ChhhHHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHH
Q ss_pred HhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHc---CCcEEEEehhhhhhhcCCCCChhhcccHHH---HHHhCcce
Q 010610 338 TASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSM---GKAVIVATNMLESMIVHPTPTRAEVSDIAI---AVREGADA 411 (506)
Q Consensus 338 ~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~---GkPvivATqmLeSMi~~~~PtRAEv~Dvan---av~dG~D~ 411 (506)
+.+|.|-++ +.-=--.|..-.++++..++. +.|+.+.++ |..-.- +|| |+..|+|.
T Consensus 156 ~~a~~i~l~------DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~H-------nd~GlA-----vAN~laAv~aGa~~ 217 (382)
T 2ztj_A 156 PYVDRVGLA------DTVGVATPRQVYALVREVRRVVGPRVDIEFHGH-------NDTGCA-----IANAYEAIEAGATH 217 (382)
T ss_dssp GGCSEEEEE------ETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEB-------CTTSCH-----HHHHHHHHHTTCCE
T ss_pred HhcCEEEec------CCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeC-------CCccHH-----HHHHHHHHHhCCCE
Q ss_pred e
Q 010610 412 V 412 (506)
Q Consensus 412 v 412 (506)
+
T Consensus 218 v 218 (382)
T 2ztj_A 218 V 218 (382)
T ss_dssp E
T ss_pred E
No 290
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=48.00 E-value=26 Score=36.80 Aligned_cols=49 Identities=24% Similarity=0.422 Sum_probs=39.0
Q ss_pred eEEEecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHH
Q 010610 111 KIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (506)
Q Consensus 111 KIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 159 (506)
.+.+-+|+.....+.+..|+++|++++=++++||......+.++.+|+.
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 3445567666668899999999999999999999887777777777753
No 291
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=47.94 E-value=1e+02 Score=30.08 Aligned_cols=96 Identities=9% Similarity=-0.039 Sum_probs=55.4
Q ss_pred HHhHhhHhcCCcEEEE------ccCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCCC
Q 010610 280 DDIKFGVDNKVDFYAV------SFVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (506)
Q Consensus 280 ~dI~~al~~gvD~Ial------SfV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRGD 349 (506)
+.++|.++.|+|+|.+ ++--|.++=.++-+...+.... ||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPY 101 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 3456788999999887 3444555555555544433223 888764 35666655555444 7999987544
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 350 LGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 350 Lgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+.--...+.+. +..-.-|.+.+.|+++.
T Consensus 102 y~~~~s~~~l~---~~f~~va~a~~lPiilY 129 (293)
T 1w3i_A 102 YYPRMSEKHLV---KYFKTLCEVSPHPVYLY 129 (293)
T ss_dssp SCSSCCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCCCCHHHHH---HHHHHHHhhCCCCEEEE
Confidence 32101222333 33334455668999875
No 292
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=47.94 E-value=45 Score=33.44 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHhCCcEEEEeCCCCCh----------HHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 121 NTREMIWKLAEAGMNVARLNMSHGDH----------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 121 ~~~e~i~~li~aGm~v~RiN~SHg~~----------e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
.+.+.++.|.+.|+|++||-++.... +...+.++.+=+...+.| +.+++|+-.
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G---i~vildlH~ 125 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG---AFVILNLHH 125 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEEECCS
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEECCC
Confidence 46889999999999999998875310 122233333333334444 788999865
No 293
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=47.92 E-value=1.4e+02 Score=29.95 Aligned_cols=100 Identities=8% Similarity=0.027 Sum_probs=57.7
Q ss_pred cHHHHHHhCcceeEeeccccCC-CCHHHHHHHHHHHHHHHhcc-ccCC-C--CCCCCCcC-cCCChHHHHHHHHHHHHhh
Q 010610 400 DIAIAVREGADAVMLSGETAHG-KFPLKAVKVMHTVSLRTEAT-ITGG-A--MPPNLGQA-FKNHMSEMFAYHATMMSNT 473 (506)
Q Consensus 400 Dvanav~dG~D~vmLs~ETA~G-~yPveaV~~m~~I~~~aE~~-~~~~-~--~~~~~~~~-~~~~~~~~ia~~av~~A~~ 473 (506)
++-.++..|+|++-+.-=...| .|-.+.++.+.+++.+++.+ ++.- . .|...... ......+.+++ ++.+|.+
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~-aaRiAaE 211 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQ-SVAIAAG 211 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHH-HHHHHHT
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHH-HHHHHHH
Confidence 7999999999996521111233 45677888888888888765 1100 0 11100111 11234677776 4678999
Q ss_pred cCce----EEEEcCChHHHHHHHhhCCCCeEEE
Q 010610 474 LGTS----IVVFTRTGFMAILLSHYRPSGTIFA 502 (506)
Q Consensus 474 ~~a~----Iiv~T~sG~tA~~lS~~RP~~pIia 502 (506)
+||- ||=.-.+...++.++.. | +||+.
T Consensus 212 LGADs~~tivK~~y~e~f~~Vv~a~-~-vPVVi 242 (307)
T 3fok_A 212 LGNDSSYTWMKLPVVEEMERVMEST-T-MPTLL 242 (307)
T ss_dssp CSSCCSSEEEEEECCTTHHHHGGGC-S-SCEEE
T ss_pred hCCCcCCCEEEeCCcHHHHHHHHhC-C-CCEEE
Confidence 9986 66533334455555554 3 77764
No 294
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=47.90 E-value=47 Score=32.21 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=59.7
Q ss_pred CHHH-hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec---CC--------hhhhhhHHHHHHhCCEEEE
Q 010610 278 DWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI---ES--------ADSIPNLHSIITASDGAMV 345 (506)
Q Consensus 278 D~~d-I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI---Et--------~~aveNldeIl~~sDGImI 345 (506)
|.+. |+.+.+.|++.++++-+ +.++...+.++.++.+ ++...+-| +- .+.++.|++.+...+.-.+
T Consensus 28 d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (301)
T 2xio_A 28 DLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVV 105 (301)
T ss_dssp CHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeE
Confidence 5444 45677899998888744 6788888877765433 33322223 11 1234555555543221233
Q ss_pred cCCCcccCCCC-C-cHHHHHH----HHHHHHHHcCCcEEEEe
Q 010610 346 ARGDLGAELPI-E-EVPLLQE----EIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 346 aRGDLgvelg~-e-~V~~~Qk----~II~~c~~~GkPvivAT 381 (506)
|=|..|.+... . .-...|+ ..++.|++.|+||++.|
T Consensus 106 aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 106 AIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred EEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 44666666533 1 2234554 55688999999999998
No 295
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=47.86 E-value=1.8e+02 Score=28.27 Aligned_cols=115 Identities=12% Similarity=0.054 Sum_probs=66.7
Q ss_pred HHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCC
Q 010610 366 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGG 445 (506)
Q Consensus 366 II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~ 445 (506)
+...|+..|.++++.. |....-..+...-..|++.+... |.| -++.+...+++.+ +..++..
T Consensus 69 lA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~-----~~~-~~~~~~a~~~~~~-~~~~~~~ 130 (318)
T 2rkb_A 69 AAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTG-----KVW-DEANLRAQELAKR-DGWENVP 130 (318)
T ss_dssp HHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHS-TTEEECC
T ss_pred HHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEEC-----CCH-HHHHHHHHHHHHh-cCCEEeC
Confidence 5677999999998763 21111123455667799877643 234 4666666555443 1111111
Q ss_pred CCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----C-CCCeEEEEeC
Q 010610 446 AMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----R-PSGTIFAFTN 505 (506)
Q Consensus 446 ~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~~----R-P~~pIia~T~ 505 (506)
.|.+ ......-...+.++.++++ . .|++.+-+|.|+--++++ . |...|+++.+
T Consensus 131 -~~~n------~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~ 191 (318)
T 2rkb_A 131 -PFDH------PLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMET 191 (318)
T ss_dssp -SSCS------HHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEE
T ss_pred -CCCC------hhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEec
Confidence 1110 0112222334567777775 4 799999999997666653 2 7789999875
No 296
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=47.76 E-value=2.1e+02 Score=29.17 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=72.8
Q ss_pred HhhHhcCCcEEEEccCC-----------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcc
Q 010610 283 KFGVDNKVDFYAVSFVK-----------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG 351 (506)
Q Consensus 283 ~~al~~gvD~IalSfV~-----------saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLg 351 (506)
+.+.+.|+|++-.-+-. ..+..+.++++.++.| +.+++-+-++..++-+.+. +|.+-||-+++-
T Consensus 127 ~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~G--l~~~te~~d~~~~~~l~~~---vd~lkIgAr~~~ 201 (350)
T 1vr6_A 127 HFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYG--MYVVTEALGEDDLPKVAEY---ADIIQIGARNAQ 201 (350)
T ss_dssp HHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcC--CcEEEEeCCHHHHHHHHHh---CCEEEECccccc
Confidence 45556788876432211 2478888888877654 7888888888887776664 799999855542
Q ss_pred cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH-hCcceeEe
Q 010610 352 AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVML 414 (506)
Q Consensus 352 velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~-dG~D~vmL 414 (506)
. ..+++++-+.||||++.|.|- .|-.|+...++++. .|.+-++|
T Consensus 202 ------n-----~~LL~~va~~~kPVilk~G~~--------~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 202 ------N-----FRLLSKAGSYNKPVLLKRGFM--------NTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp ------C-----HHHHHHHHTTCSCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ------C-----HHHHHHHHccCCcEEEcCCCC--------CCHHHHHHHHHHHHHCCCCeEEE
Confidence 2 234555668899999987432 36678887888665 46645555
No 297
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=47.66 E-value=77 Score=26.40 Aligned_cols=55 Identities=16% Similarity=0.171 Sum_probs=39.4
Q ss_pred CCCeeEEeccC--CCeEec-CCCEEEEEEecCCCCceEEEeccchh-hhhcCCCCEEEE
Q 010610 175 KGPEVRSGDLP--QPITLT-SGQEFTFTIQRGVGSAECVSVNYDDF-VNDVEVGDMLLV 229 (506)
Q Consensus 175 ~GPkIRtG~l~--~~i~Lk-~G~~v~lt~~~~~~~~~~i~v~~~~l-~~~v~~Gd~Ili 229 (506)
.|..+|+|.+- +.+.-. .|..++|...+.......++|.|..+ ++..+.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 67799998752 455544 47889998876544457899999865 466688887765
No 298
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=47.50 E-value=86 Score=31.18 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=22.6
Q ss_pred CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 374 GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
+.|+|.... .-+ -.|+..++..|+|+|++..
T Consensus 251 ~ipvia~GG---------I~~---~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGG---------LQD---ALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESS---------CCS---HHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECC---------CCC---HHHHHHHHHcCCCEEEEcH
Confidence 688886543 222 3478899999999999863
No 299
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=47.49 E-value=37 Score=34.74 Aligned_cols=100 Identities=14% Similarity=0.088 Sum_probs=55.1
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCC-----------------------HHHHHHHHHHHHhcCCCceEEE--ecC
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKD-----------------------AQVVHELKNYLKSCGADIHVIV--KIE 325 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~s-----------------------aedV~~lr~~l~~~~~~i~IIa--KIE 325 (506)
|.+++.|..++ +.+.+.|+|+|.++.-.. +-.++.++++-+..+.+++||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 34555555554 456789999999874321 0122333333333345678887 477
Q ss_pred ChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCC
Q 010610 326 SADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (506)
Q Consensus 326 t~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~Gk 375 (506)
|.+-+ .+-|..-+|+|||||+=|-- +..-+..+.+.+-..+.+.|.
T Consensus 309 s~~da--~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 309 SGQDA--LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp SHHHH--HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHH--HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 66443 22222338999999986421 233344555555555555553
No 300
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=47.11 E-value=2.1e+02 Score=28.61 Aligned_cols=128 Identities=15% Similarity=0.181 Sum_probs=67.4
Q ss_pred CCCccCHHHh--------HhhHhcCCcEEEEccC-------------CCH------------HHHHHHHHHHHhcCCCce
Q 010610 273 SITEKDWDDI--------KFGVDNKVDFYAVSFV-------------KDA------------QVVHELKNYLKSCGADIH 319 (506)
Q Consensus 273 ~ltekD~~dI--------~~al~~gvD~IalSfV-------------~sa------------edV~~lr~~l~~~~~~i~ 319 (506)
.||..|++.+ +.+.+.|+|+|=+-.- +.. .-+.++.+.+++.= +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 6788887776 3557889999976543 111 11223333333322 567
Q ss_pred EEEecCChh------hhhhHHHHHH----h-CCEEEEcCCCcccC-CCCCcHHHHHHHHHHH-HHHcCCcEEEEehhhhh
Q 010610 320 VIVKIESAD------SIPNLHSIIT----A-SDGAMVARGDLGAE-LPIEEVPLLQEEIIRT-CRSMGKAVIVATNMLES 386 (506)
Q Consensus 320 IIaKIEt~~------aveNldeIl~----~-sDGImIaRGDLgve-lg~e~V~~~Qk~II~~-c~~~GkPvivATqmLeS 386 (506)
|..||---+ -++..-++++ . +|.|-|.-|.+.-. ++.. +..+...++. .+..++||+....+
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~GgI--- 286 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGLI--- 286 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESSC---
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCCC---
Confidence 777875321 1333333333 2 79888864433211 1111 1112222332 23458999876432
Q ss_pred hhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 387 MIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 387 Mi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
-+. .++..++..| +|+|++.
T Consensus 287 ------~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 287 ------TSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCH---HHHHHHHHCCCeeEEEec
Confidence 122 2455788888 9999985
No 301
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=47.01 E-value=65 Score=32.59 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=45.3
Q ss_pred CHHHhHhhHhcCCcEEEEccC---------------CCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHhC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFV---------------KDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITAS 340 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV---------------~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~s 340 (506)
+.++.+.+.+.|+|+|.++.= .+..-+.++.+.... .++.||+ -|-+...+ ...+..=+
T Consensus 171 t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~g~di--~kAlalGA 246 (351)
T 2c6q_A 171 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG--LKGHIISDGGCSCPGDV--AKAFGAGA 246 (351)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH--TTCEEEEESCCCSHHHH--HHHHHTTC
T ss_pred CHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh--cCCcEEEeCCCCCHHHH--HHHHHcCC
Confidence 467888899999999988741 112233444444433 2588888 66665443 23333338
Q ss_pred CEEEEcCCCccc
Q 010610 341 DGAMVARGDLGA 352 (506)
Q Consensus 341 DGImIaRGDLgv 352 (506)
|++++|+.=|+.
T Consensus 247 ~~V~vG~~fl~~ 258 (351)
T 2c6q_A 247 DFVMLGGMLAGH 258 (351)
T ss_dssp SEEEESTTTTTB
T ss_pred CceeccHHHhcC
Confidence 999999977753
No 302
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=46.76 E-value=68 Score=33.04 Aligned_cols=65 Identities=20% Similarity=0.149 Sum_probs=47.0
Q ss_pred CccCHHHhHhhHhc-CCcEEEEcc-------CCCHHHHHHHHHHHHhcCCCceEEEec-----------CChhhhhhHHH
Q 010610 275 TEKDWDDIKFGVDN-KVDFYAVSF-------VKDAQVVHELKNYLKSCGADIHVIVKI-----------ESADSIPNLHS 335 (506)
Q Consensus 275 tekD~~dI~~al~~-gvD~IalSf-------V~saedV~~lr~~l~~~~~~i~IIaKI-----------Et~~aveNlde 335 (506)
.+.|...|+.+.+. |+++|-++- +-+.+++.++++.+++.|-.+..+.-+ +..+.++|+.+
T Consensus 29 g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~ 108 (386)
T 3bdk_A 29 GKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKT 108 (386)
T ss_dssp CTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHH
Confidence 34566778888999 999998762 557799999999999888766554211 12456677777
Q ss_pred HHHh
Q 010610 336 IITA 339 (506)
Q Consensus 336 Il~~ 339 (506)
.++.
T Consensus 109 ~i~~ 112 (386)
T 3bdk_A 109 SIRN 112 (386)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 303
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=46.66 E-value=1.5e+02 Score=29.47 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=71.6
Q ss_pred hcCCcEEEEccCCC--------------HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCccc
Q 010610 287 DNKVDFYAVSFVKD--------------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 352 (506)
Q Consensus 287 ~~gvD~IalSfV~s--------------aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgv 352 (506)
+.+..+|+-++.+. .+-++.++++.++.| +.++.-+-+++.++-+. +.+|.+-||-+++
T Consensus 49 ~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~G--lp~~Tev~d~~~v~~l~---~~vd~lqIgA~~~-- 121 (285)
T 3sz8_A 49 KLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFG--VPVITDVHEAEQAAPVA---EIADVLQVPAFLA-- 121 (285)
T ss_dssp HHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHC--CCEEEECCSGGGHHHHH---TTCSEEEECGGGT--
T ss_pred hheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC--CeEEEEeCCHHHHHHHH---HhCCEEEECcccc--
Confidence 34677777764442 466778888886644 67888777777765554 4589999985544
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH-hCcceeEeec
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLSG 416 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~-dG~D~vmLs~ 416 (506)
...+ +++++.+.||||++.|.|. -|-.|+...+..+. .|.+-++|..
T Consensus 122 ----~n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 122 ----RQTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCE 169 (285)
T ss_dssp ----TCHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEE
T ss_pred ----CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEe
Confidence 2333 6666678999999987553 25567766777665 4777777753
No 304
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=46.64 E-value=41 Score=33.35 Aligned_cols=63 Identities=8% Similarity=0.145 Sum_probs=47.2
Q ss_pred cCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhh--hhhHHHHHHh-CCEEEEcC
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~a--veNldeIl~~-sDGImIaR 347 (506)
.+.++++.+++.|+|+|++..+ ++++++++.+.++ .++++.| --| .+|+.++++. +|+|-++.
T Consensus 204 ~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A----sGGIt~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 204 RSLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA----SGNMTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE----ESSCCHHHHHHHHHHTCSEEECTH
T ss_pred CCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE----EcCCCHHHHHHHHHcCCCEEEEcH
Confidence 3578888899999999999986 6778887777663 2455544 222 5788999888 99999863
No 305
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=46.00 E-value=1.4e+02 Score=28.86 Aligned_cols=116 Identities=12% Similarity=0.016 Sum_probs=66.9
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |....-..+...-..|++.+...+ .| -++.+...+++.+-. .++
T Consensus 79 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~~~~~~~-~~~- 139 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVVM-----------PEDASPYKKACARAYGAEVVDRGV-----TA-KNREEVARALQEETG-YAL- 139 (311)
T ss_dssp HHHHHHHHHTCCEEEEC-----------CCC--CCHHHHHHHTTCEEECTTC-----CT-TTHHHHHHHHHHHHC-CEE-
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhcC-cEe-
Confidence 45677899999998762 222222346667778998765432 24 356666666655422 111
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhc-----Cc-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTL-----GT-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-----~a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
-..|.+ ..........+.++.+++ .. .|++.+-+|.|+--+++ +.|...|+++.+
T Consensus 140 ~~~~~n------~~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~ 204 (311)
T 1ve5_A 140 IHPFDD------PLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEP 204 (311)
T ss_dssp CCSSSS------HHHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred cCCCCC------cchhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 111111 011222233345566665 24 89999999998666554 479999999875
No 306
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=45.66 E-value=36 Score=32.97 Aligned_cols=88 Identities=11% Similarity=0.085 Sum_probs=47.9
Q ss_pred HHhHhhHhcCCcEEEEcc--------CCCH--------------H----HHHHHHHHHHhcCCCceEEE--ecCChhhhh
Q 010610 280 DDIKFGVDNKVDFYAVSF--------VKDA--------------Q----VVHELKNYLKSCGADIHVIV--KIESADSIP 331 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSf--------V~sa--------------e----dV~~lr~~l~~~~~~i~IIa--KIEt~~ave 331 (506)
+.++.+.+.|+|+|.++- .++. . .+..++++.+. .+++||+ -|-+.+-
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~--~~ipvia~GGI~~~~d-- 255 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD--VDIPIIGMGGVANAQD-- 255 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT--CSSCEEECSSCCSHHH--
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh--cCCCEEEECCcCCHHH--
Confidence 335677789999999952 2211 1 12223332221 2577776 3555443
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCC
Q 010610 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (506)
Q Consensus 332 NldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~Gk 375 (506)
+.+.++. +|+|++||+=|. +.+-+..+.+.+-......|.
T Consensus 256 -~~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 256 -VLEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp -HHHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCC
Confidence 3333433 999999998665 344444555554444444454
No 307
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=45.53 E-value=34 Score=34.15 Aligned_cols=18 Identities=0% Similarity=-0.239 Sum_probs=15.8
Q ss_pred HHHhHhhHhcCCcEEEEc
Q 010610 279 WDDIKFGVDNKVDFYAVS 296 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalS 296 (506)
.++++.+.+.|+|+|.++
T Consensus 192 ~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 577888899999999997
No 308
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=45.19 E-value=1.7e+02 Score=26.78 Aligned_cols=123 Identities=8% Similarity=0.032 Sum_probs=73.9
Q ss_pred HHHhHhhHhcCCcEEEEccC------CCHHHHHHHHHHHHhcCCCceEEEe---cC--ChhhhhhHHHHHHh-----CCE
Q 010610 279 WDDIKFGVDNKVDFYAVSFV------KDAQVVHELKNYLKSCGADIHVIVK---IE--SADSIPNLHSIITA-----SDG 342 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV------~saedV~~lr~~l~~~~~~i~IIaK---IE--t~~aveNldeIl~~-----sDG 342 (506)
.+.++.+.+.|.|+|-+..- .+..++.++++.+++.|-.+..+.- +. ..+.++.+...++. ++.
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCE
Confidence 34567888999999988742 1456789999999988766533321 22 12334455555544 577
Q ss_pred EEEcCCCcccCCCCCcH-HHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHH
Q 010610 343 AMVARGDLGAELPIEEV-PLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV 405 (506)
Q Consensus 343 ImIaRGDLgvelg~e~V-~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav 405 (506)
|.+.+|.-+- -.++.+ ...-+++...|.++|..+.+=+.- .-.+...|..++.++...+
T Consensus 102 v~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~---~~~~~~~~~~~~~~l~~~v 161 (272)
T 2q02_A 102 LVLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGLVEPLG---FRVSSLRSAVWAQQLIREA 161 (272)
T ss_dssp EEECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEEECCCC---STTCSCCCHHHHHHHHHHH
T ss_pred EEEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEEEEecC---CCcccccCHHHHHHHHHHh
Confidence 7776664332 223455 677788889999999876653210 0112334555555555554
No 309
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=45.13 E-value=1.3e+02 Score=29.46 Aligned_cols=116 Identities=14% Similarity=0.121 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |....-..+...-..|++.+...+. | -++.+...+++.+-. .++
T Consensus 88 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~~~- 148 (323)
T 1v71_A 88 AIALSAKILGIPAKIIM-----------PLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-LTI- 148 (323)
T ss_dssp HHHHHHHHTTCCEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-CBC-
T ss_pred HHHHHHHHcCCCEEEEC-----------CCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-CEe-
Confidence 45677999999988762 1111122356677789998765432 2 245666666654422 111
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC-c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~-a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
-..|.+ ..........+.++.++++ . .|++.+-+|.|+--+++ +.|...|+++.+
T Consensus 149 i~~~~n------~~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~ 209 (323)
T 1v71_A 149 IPPYDH------PHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEP 209 (323)
T ss_dssp CCSSSS------HHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cCCCCC------cchhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 111111 0112222334567777775 4 89999989998766554 579999999875
No 310
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=45.13 E-value=1.3e+02 Score=30.15 Aligned_cols=105 Identities=10% Similarity=0.155 Sum_probs=70.2
Q ss_pred hcCCcEEEEccCCC--------------HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCccc
Q 010610 287 DNKVDFYAVSFVKD--------------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 352 (506)
Q Consensus 287 ~~gvD~IalSfV~s--------------aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgv 352 (506)
+.+..+|+-+..+. .+-++.++++.++. .+.+++-+-+++.++-+ .+.+|.+-||-+++
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~l---~~~vd~lkIgA~~~-- 142 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCAAV---APVVDVLQIPAFLC-- 142 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHHHH---TTTCSEEEECGGGT--
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HhhCCEEEECcccc--
Confidence 34677787765543 35677778877654 46788877777766554 44589999985443
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-CcceeEee
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLS 415 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-G~D~vmLs 415 (506)
...+ +++++.+.||||++.|.|. -|-.|+...+..+.. |.+-++|.
T Consensus 143 ----~n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 143 ----RQTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLAT 189 (298)
T ss_dssp ----TCHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEE
T ss_pred ----CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 3343 4555668899999987652 255677667776654 77777775
No 311
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=44.92 E-value=1.1e+02 Score=32.00 Aligned_cols=120 Identities=13% Similarity=0.062 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |..+....+...-..|++.+....+. .| -++++...+++++.+..++.
T Consensus 189 AlA~aAa~~Gl~~~Ivm-----------P~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~~~i 253 (430)
T 4aec_A 189 GLAFIAASRGYRLILTM-----------PASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDAYML 253 (430)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHhCCEEEEEE-----------cCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCcEEe
Confidence 45567999999988762 33333334566677899988765321 22 35666666665543322221
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
. .|.+ +..+..-....+.++.++++ . .||+..-+|.|.--+++ +.|.+.|+++.+
T Consensus 254 ~-~~~n-----p~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep 315 (430)
T 4aec_A 254 Q-QFDN-----PANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEP 315 (430)
T ss_dssp C-TTTC-----THHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred c-CCCC-----ccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 1 1111 00111222334567777774 4 78888888887665554 489999999865
No 312
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=44.70 E-value=93 Score=30.42 Aligned_cols=50 Identities=20% Similarity=0.403 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 363 QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 363 Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
-+..++.|+++|++|.+-| . + +-.+...++..|+|+|+- +||-.+.+.+.
T Consensus 257 ~~~~v~~~~~~Gl~V~~WT--V----n-------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~ 306 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWT--V----N-------EPEDIRRMATTGVDGIVT-------DYPGRTQRILI 306 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBC--C----C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEc--C----C-------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 4688999999999999997 1 1 123567788899999985 68988877765
No 313
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=44.64 E-value=1.5e+02 Score=28.75 Aligned_cols=117 Identities=14% Similarity=0.025 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |.......+...-..|++.+....+ |.| -++.+...+++++.+.. +
T Consensus 75 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~---~~~-~~~~~~a~~~~~~~~~~--~ 137 (303)
T 2v03_A 75 ALAMIAALKGYRMKLLM-----------PDNMSQERRAAMRAYGAELILVTKE---QGM-EGARDLALEMANRGEGK--L 137 (303)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTT---THH-HHHHHHHHHHHHTTSCE--E
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCc--c
Confidence 45677899999988762 2222222355667789998776532 223 35665555554432221 1
Q ss_pred CCCCCCCCcCcCCCh-HH-HHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHM-SE-MFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~-~~-~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
...|. +.. .. -....+.++.++++ . .|++.+-+|.|+--+++ ..|...|+++.+
T Consensus 138 ~~~~~-------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 200 (303)
T 2v03_A 138 LDQFN-------NPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP 200 (303)
T ss_dssp CCTTT-------CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred cCCcC-------ChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcC
Confidence 11111 111 11 12233567777775 4 89999999998766664 468899999876
No 314
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=44.55 E-value=73 Score=29.66 Aligned_cols=138 Identities=9% Similarity=0.005 Sum_probs=79.3
Q ss_pred HHhHhhHhcCCcEEEEcc---CCCHHHHHHHHHHHHhcCCCceEEE--ec-CChhhh-hhHHHHHHh-----CCEEEEcC
Q 010610 280 DDIKFGVDNKVDFYAVSF---VKDAQVVHELKNYLKSCGADIHVIV--KI-ESADSI-PNLHSIITA-----SDGAMVAR 347 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSf---V~saedV~~lr~~l~~~~~~i~IIa--KI-Et~~av-eNldeIl~~-----sDGImIaR 347 (506)
+.++.+.+.|+|+|=+.. -.+. ++.++++.+++.|-.+..+. .+ .....+ +.+...++. +..|.+..
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEec
Confidence 456788899999998752 2223 78899999998876543322 11 112245 556655554 57777776
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-CcceeEeeccc----cCCC
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GADAVMLSGET----AHGK 422 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-G~D~vmLs~ET----A~G~ 422 (506)
|+.... + .-+++...+.++|..+.+=+ +-.....+-.++.++...+.. |.+ +-+.-+| ..|.
T Consensus 106 g~~~~~---~----~l~~l~~~a~~~Gv~l~lEn-----~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g~~~~~~~ 172 (264)
T 1yx1_A 106 GLLPEQ---P----DLAALGRRLARHGLQLLVEN-----DQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIGNWRWQEQ 172 (264)
T ss_dssp ECCCSS---C----CHHHHHHHHTTSSCEEEEEC-----CSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETTGGGGGTC
T ss_pred CCCCcH---H----HHHHHHHHHHhcCCEEEEec-----CCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehhhhhhcCC
Confidence 654321 1 45677788888887766532 110001133445555555522 344 5555566 3466
Q ss_pred CHHHHHHHH
Q 010610 423 FPLKAVKVM 431 (506)
Q Consensus 423 yPveaV~~m 431 (506)
.|.+.++.+
T Consensus 173 d~~~~~~~~ 181 (264)
T 1yx1_A 173 AADEAALRL 181 (264)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 777766544
No 315
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=44.49 E-value=34 Score=34.17 Aligned_cols=140 Identities=17% Similarity=0.115 Sum_probs=74.2
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEEEc-CCCcc--
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVA-RGDLG-- 351 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGImIa-RGDLg-- 351 (506)
.+..+...+.|+|+|..|.+.+..++ .+.+.+++....+++- +.+++|...+ +|.|-+. |+.=|
T Consensus 90 ide~qil~aaGAD~Id~s~~~~~~~l---i~~i~~~~~g~~vvv~------v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~ 160 (297)
T 4adt_A 90 FVEAQILEELKVDMLDESEVLTMADE---YNHINKHKFKTPFVCG------CTNLGEALRRISEGASMIRTKGEAGTGNI 160 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCS---SCCCCGGGCSSCEEEE------ESSHHHHHHHHHHTCSEEEECCCTTSCCC
T ss_pred HHHHHHHHHcCCCEEEcCCCCCHHHH---HHHHHhcCCCCeEEEE------eCCHHHHHHHHhCCCCEEEECCCcCCCch
Confidence 45555566899999976766443322 1222222234556663 3445544332 7877765 21111
Q ss_pred -----------------cCCCCCcHHHH-------HHHHHHHHHHcCCcEEE-EehhhhhhhcCCCCChhhcccHHHHHH
Q 010610 352 -----------------AELPIEEVPLL-------QEEIIRTCRSMGKAVIV-ATNMLESMIVHPTPTRAEVSDIAIAVR 406 (506)
Q Consensus 352 -----------------velg~e~V~~~-------Qk~II~~c~~~GkPviv-ATqmLeSMi~~~~PtRAEv~Dvanav~ 406 (506)
..++.+.+... ...+-+.+.....|+++ |. ...-|. .|+..+..
T Consensus 161 ~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~--------GGI~t~---~dv~~~~~ 229 (297)
T 4adt_A 161 IEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAA--------GGIATP---ADAAMCMQ 229 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEE--------SCCCSH---HHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEec--------CCCCCH---HHHHHHHH
Confidence 01111121111 11122233445788873 32 233333 46778888
Q ss_pred hCcceeEeeccccCCCCHHHHHHHHHHHHHHH
Q 010610 407 EGADAVMLSGETAHGKFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 407 dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~a 438 (506)
.|+|+++...---....|.++++.+...+...
T Consensus 230 ~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~ 261 (297)
T 4adt_A 230 LGMDGVFVGSGIFESENPQKMASSIVMAVSNF 261 (297)
T ss_dssp TTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhh
Confidence 99999998544344568999998887766543
No 316
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=44.45 E-value=80 Score=39.58 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=73.7
Q ss_pred HHhHhhHhcCCcE--EEEccCCCHHHHHHHHHHHHhcCCCceEEEecCCh-hhhhhHHHHHHh-CCEEE---EcCCCccc
Q 010610 280 DDIKFGVDNKVDF--YAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA-DSIPNLHSIITA-SDGAM---VARGDLGA 352 (506)
Q Consensus 280 ~dI~~al~~gvD~--IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~-~aveNldeIl~~-sDGIm---IaRGDLgv 352 (506)
+.++.+++.|++. |.+++=. + ..+++.+++++.| +.++..+-+. +|.+....|.+. +|+|+ +--+|=|-
T Consensus 657 ~~~~~~~~~gv~i~gv~~~~G~-p-~~e~~~~~l~~~g--i~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGG 732 (2060)
T 2uva_G 657 PLLGRLRADGVPIEGLTIGAGV-P-SIEVANEYIQTLG--IRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGG 732 (2060)
T ss_dssp HHHHHHHTTTCCEEEEEEESSC-C-CHHHHHHHHHHSC--CSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSS
T ss_pred HHHHHHHHcCCCcceEeecCCC-C-CHHHHHHHHHHcC--CeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCC
Confidence 5677888999999 7777643 1 1223456666654 4555555443 344443444555 89988 65556666
Q ss_pred CCCCCcHHHHHHHHHHHHHH-cCCcEEEEehhhhhhhcCCCCChhhcccHHHHH-----------HhCcceeEe
Q 010610 353 ELPIEEVPLLQEEIIRTCRS-MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAV-----------REGADAVML 414 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~-~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav-----------~dG~D~vmL 414 (506)
+.+.+++....-.++...++ .++|+|.+..+- + -.|++.++ ..|+|+|++
T Consensus 733 H~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~---------~---g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 733 HHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG---------G---SEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC---------S---HHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCcccccchHHHHHHHHHHHcCCCEEEeCCCC---------C---HHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 66654433333344444444 479999886433 2 34788899 899999986
No 317
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=44.33 E-value=1.3e+02 Score=29.24 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=67.0
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.. |.......+...-..|++.+...++. .| -++++...+++.+-.. ++
T Consensus 79 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~-~~- 141 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY-FM- 141 (308)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC-BC-
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC-Cc-
Confidence 46678899999988762 22111223556677899987765431 23 4677766666655432 11
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
...|.+ +.....-....+.++.++++ . .||+.+-+|.|+--+++ +.|...|+++.+
T Consensus 142 ~~~~~n-----~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~ 204 (308)
T 2egu_A 142 PQQFKN-----EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEP 204 (308)
T ss_dssp C-------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCcCCC-----hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEe
Confidence 111111 00110112223456666664 4 89999999998765554 469999999875
No 318
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=44.10 E-value=18 Score=36.05 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=48.7
Q ss_pred CHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhh--hhhHHHHHHh-CCEEEEcC
Q 010610 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~a--veNldeIl~~-sDGImIaR 347 (506)
+.+.++.+++.|+|+|.+-. -++++++++.+.+...+.++++.+ --| .+|+.++.+. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDN-LSPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 47788889999999999998 478999999888875444544433 333 3567777766 89999986
No 319
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=44.07 E-value=1e+02 Score=32.20 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=67.5
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |.......+...-..|++.+....+...+ .+..+++...+++.+....++.
T Consensus 175 AlA~aaa~~Gi~~~Ivm-----------P~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIVM-----------PEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEEE-----------CSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEEe-----------CCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 46677999999998862 22222234556667899987764321111 1112445555554443222211
Q ss_pred CCCCCCCCcCcCCChHHHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
. .|.+ ..++.......+.++.++++ . .||+.+-+|.|+--+++ ..|.+.|+++.+
T Consensus 243 ~-q~~n-----~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep 304 (435)
T 1jbq_A 243 D-QYRN-----ASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 304 (435)
T ss_dssp C-TTTC-----THHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred C-ccCC-----cccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEec
Confidence 1 1111 00111112233567777774 4 89999999998765554 479999999865
No 320
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=43.98 E-value=42 Score=33.33 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=50.4
Q ss_pred hHhhHhcCCcEEEEccC----CCHHHHHHHHHHHHh-cCCC-ceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCC
Q 010610 282 IKFGVDNKVDFYAVSFV----KDAQVVHELKNYLKS-CGAD-IHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAEL 354 (506)
Q Consensus 282 I~~al~~gvD~IalSfV----~saedV~~lr~~l~~-~~~~-i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvel 354 (506)
.+.+.+.|+|+|-+... .+.+++.++.+.... .+.. +.++.-+-..+-++++.+.++. ++|+.+||.=+.-.+
T Consensus 183 a~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~ 262 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp HHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred HHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccc
Confidence 56677899999999985 456777666665433 2332 3333345333456788888877 899999998776644
Q ss_pred CCC
Q 010610 355 PIE 357 (506)
Q Consensus 355 g~e 357 (506)
+.+
T Consensus 263 ~~~ 265 (304)
T 1to3_A 263 GLP 265 (304)
T ss_dssp TCS
T ss_pred cCC
Confidence 334
No 321
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=43.94 E-value=60 Score=33.69 Aligned_cols=55 Identities=13% Similarity=0.313 Sum_probs=38.9
Q ss_pred CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-Cc-ceeEe
Q 010610 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GA-DAVML 414 (506)
Q Consensus 340 sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-G~-D~vmL 414 (506)
+|.+=||-+|+- .++ +++++.+.|||||+.|.|- |-.|+...+.++.. |. +.++|
T Consensus 135 vd~~KIgS~~~~------N~p-----LL~~va~~gKPViLStGma---------Tl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 135 PSAFKIASYEIN------HLP-----LLKYVARLNRPMIFSTAGA---------EISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp CSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTTC---------CHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCCC---------CHHHHHHHHHHHHHCCCCcEEEE
Confidence 588888877663 233 3666777899999998753 67888888888774 55 45554
No 322
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=43.88 E-value=22 Score=36.99 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=33.9
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHH
Q 010610 114 CTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (506)
Q Consensus 114 ~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 158 (506)
+.+|+.. .+.++.++++|++++=|+.+||..+.+.+.++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999988777777766663
No 323
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=43.75 E-value=61 Score=31.40 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=63.8
Q ss_pred HHHhHhhHhcCCcEEEEc--------------cCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEE
Q 010610 279 WDDIKFGVDNKVDFYAVS--------------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGA 343 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalS--------------fV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGI 343 (506)
.+.++...+.|+++|-+. ..++.+.++++++. .+++++.++-.. -.+.++.+.+. +|+|
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-----~~~Pvi~~~~~~-~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-----VSIPVMAKVRIG-HFVEAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-----CSSCEEEEEETT-CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-----cCCCeEEEeccC-CHHHHHHHHHCCCCEE
Confidence 455667778999999662 12234444444322 245666543221 14556666655 8999
Q ss_pred EEcCCCcccCCCCCcHHHHHHHHHHHHHH--cCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCC
Q 010610 344 MVARGDLGAELPIEEVPLLQEEIIRTCRS--MGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 421 (506)
Q Consensus 344 mIaRGDLgvelg~e~V~~~Qk~II~~c~~--~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G 421 (506)
|.......++ +++.+++ .+.++++-+. +..| ...+...|+|.+...+|...|
T Consensus 105 -----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v~-----------~~~~---~~~a~~~Gad~I~v~G~~~~g 158 (297)
T 2zbt_A 105 -----DESEVLTPAD-------EEHHIDKWKFKVPFVCGAR-----------NLGE---ALRRIAEGAAMIRTKGEAGTG 158 (297)
T ss_dssp -----EEETTSCCSC-------SSCCCCGGGCSSCEEEEES-----------SHHH---HHHHHHTTCSEEEECCCSSSC
T ss_pred -----eeeCCCChHH-------HHHHHHHhCCCceEEeecC-----------CHHH---HHHHHHcCCCEEEEcccccCc
Confidence 2222222221 2222222 2666663221 1222 445788999999999887777
Q ss_pred CCHHHHHHHH
Q 010610 422 KFPLKAVKVM 431 (506)
Q Consensus 422 ~yPveaV~~m 431 (506)
. ..++..-+
T Consensus 159 ~-~~e~~~~~ 167 (297)
T 2zbt_A 159 N-VVEAVRHA 167 (297)
T ss_dssp C-THHHHHHH
T ss_pred c-hHHHHhhH
Confidence 3 34554443
No 324
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=43.71 E-value=1.3e+02 Score=24.41 Aligned_cols=116 Identities=9% Similarity=0.083 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEecCCh-hhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCc
Q 010610 299 KDAQVVHELKNYLKSCGADIHVIVKIESA-DSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKA 376 (506)
Q Consensus 299 ~saedV~~lr~~l~~~~~~i~IIaKIEt~-~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkP 376 (506)
.+......++.+|...|....+ ....+. +|+ +.+-.. .|.|++. + .+|-..-....+++-+.....+.|
T Consensus 13 d~~~~~~~l~~~L~~~~~~~~v-~~~~~~~~a~---~~l~~~~~dlii~D---~--~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 13 DNPDDIALIRRVLDRKDIHCQL-EFVDNGAKAL---YQVQQAKYDLIILD---I--GLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEE-EEESSHHHHH---HHHTTCCCSEEEEC---T--TCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCeeE-EEECCHHHHH---HHhhcCCCCEEEEe---C--CCCCCCHHHHHHHHHhcccccCCC
Confidence 4555666778888776655322 222222 222 222222 5888874 2 222222222223332211235688
Q ss_pred EEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCC-CHHHHHHHHHHHHHHHhc
Q 010610 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK-FPLKAVKVMHTVSLRTEA 440 (506)
Q Consensus 377 vivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~-yPveaV~~m~~I~~~aE~ 440 (506)
+++.|. ..+......+...|++.++.- -- .+.+-.+.+.++.+....
T Consensus 84 ii~~s~------------~~~~~~~~~~~~~ga~~~l~K-----p~~~~~~l~~~i~~~l~~~~~ 131 (144)
T 3kht_A 84 IVILTD------------NVSDDRAKQCMAAGASSVVDK-----SSNNVTDFYGRIYAIFSYWLT 131 (144)
T ss_dssp EEEEET------------TCCHHHHHHHHHTTCSEEEEC-----CTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC------------CCCHHHHHHHHHcCCCEEEEC-----CCCcHHHHHHHHHHHHHHHHh
Confidence 888762 223345678899999998875 22 355666666666665543
No 325
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=43.70 E-value=64 Score=32.84 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEEcC-CCcccCCCCCcHHHHHHHHHHHHHHcCCc
Q 010610 300 DAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKA 376 (506)
Q Consensus 300 saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImIaR-GDLgvelg~e~V~~~Qk~II~~c~~~GkP 376 (506)
+.++++.+++.. +.+|+.| +-+ .+......+. +|+|.|.- |-=....+...+ ....++.+... ..+|
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v~~---~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~ip 286 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGIQH---PEDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KRVP 286 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TSSC
T ss_pred hHHHHHHHHHHc-----CCCEEEEcCCC---HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CCCe
Confidence 345666666643 4567777 222 2333333333 79999841 100012222222 22223322221 2589
Q ss_pred EEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 377 vivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
||....+ -+ -.|+..++..|+|+||+.
T Consensus 287 Via~GGI---------~~---g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 287 IVFDSGV---------RR---GEHVAKALASGADVVALG 313 (368)
T ss_dssp EEECSSC---------CS---HHHHHHHHHTTCSEEEEC
T ss_pred EEEECCC---------CC---HHHHHHHHHcCCCEEEEC
Confidence 8876432 22 358999999999999986
No 326
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=43.68 E-value=1.1e+02 Score=29.82 Aligned_cols=89 Identities=20% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHhCcceeEeec
Q 010610 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGADAVMLSG 416 (506)
Q Consensus 340 sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~dG~D~vmLs~ 416 (506)
+||+++. |-- +..+..++-..+.+..++.++ -..|||..+ ...+-.|.-+ ...|-..|+|++|+..
T Consensus 42 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 42 TDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999985 211 123333344444444444443 247888775 2334445444 4457778999999874
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE 439 (506)
=--...-.-+.++....|+..+.
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 43333345678888999988774
No 327
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=43.62 E-value=30 Score=33.61 Aligned_cols=53 Identities=15% Similarity=0.069 Sum_probs=34.0
Q ss_pred CHHHHHHHHHhCCcEEEEeCCCC---------Ch-HHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 122 TREMIWKLAEAGMNVARLNMSHG---------DH-ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SHg---------~~-e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
+.+.++.|.+.|+|++||-++.. .. +...+.++.+=+...+.| +.+++|+-.-
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g---i~vild~h~~ 95 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG---AYAVVDPHNY 95 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT---CEEEEEECCT
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC---CEEEEecccc
Confidence 48899999999999999988631 11 222333333333344445 7788997653
No 328
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=43.53 E-value=1.3e+02 Score=30.03 Aligned_cols=93 Identities=12% Similarity=0.082 Sum_probs=54.4
Q ss_pred hHhhHhcCCcEEEEccCCCHH---------------HHHHHHHHH----HhcCCCceEEEecCChhhhhhHH----HHHH
Q 010610 282 IKFGVDNKVDFYAVSFVKDAQ---------------VVHELKNYL----KSCGADIHVIVKIESADSIPNLH----SIIT 338 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~sae---------------dV~~lr~~l----~~~~~~i~IIaKIEt~~aveNld----eIl~ 338 (506)
++.+++.|+|+|.+=-|.+-+ +...+...| +..+.+..|+.| .|.+-++ ++..
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 456788999999998886533 222222223 555666777665 2444555 7777
Q ss_pred hCCEEEEcCCCcccCCC--C-CcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 339 ASDGAMVARGDLGAELP--I-EEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 339 ~sDGImIaRGDLgvelg--~-e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
..||++.-- +--.-. . ++-......-+..++++||||+..
T Consensus 204 ~id~v~~Es--~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVEN--LFYLKTIPLEENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEES--SSEETTEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEeee--EEecCCCCCCHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 789887641 211100 0 111122234556778889999975
No 329
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=42.95 E-value=1.9e+02 Score=26.19 Aligned_cols=127 Identities=13% Similarity=0.093 Sum_probs=72.7
Q ss_pred HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCCh---------hhhhhHHHHHHh-CCEEEEcCCCccc
Q 010610 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA---------DSIPNLHSIITA-SDGAMVARGDLGA 352 (506)
Q Consensus 283 ~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~---------~aveNldeIl~~-sDGImIaRGDLgv 352 (506)
+...+.|++++-+ .+.+.++++++.. +.+++..+.+. .-.+.++..++. +|.+.++-.++-
T Consensus 30 ~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~- 100 (223)
T 1y0e_A 30 LAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQ- 100 (223)
T ss_dssp HHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC-
T ss_pred HHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc-
Confidence 3456789999865 5788888888754 33444221110 112455555555 899988744321
Q ss_pred CCCCCcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec--cccCCCC---HH
Q 010610 353 ELPIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG--ETAHGKF---PL 425 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~--ETA~G~y---Pv 425 (506)
-|.+.+ .++++.+++. |+++++-. -|.. +...+...|+|.++.+. -|..+.. ..
T Consensus 101 -~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~---e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~ 161 (223)
T 1y0e_A 101 -RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVE---EAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ 161 (223)
T ss_dssp -CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHH---HHHHHHHTTCSEEECTTTTSSTTSTTCCTTH
T ss_pred -CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHH---HHHHHHHcCCCEEEeCCCcCcCCCCCCCCCc
Confidence 011222 4678888887 88887532 1333 35568889999998752 2222111 23
Q ss_pred HHHHHHHHHHHH
Q 010610 426 KAVKVMHTVSLR 437 (506)
Q Consensus 426 eaV~~m~~I~~~ 437 (506)
..++.+.++...
T Consensus 162 ~~~~~~~~~~~~ 173 (223)
T 1y0e_A 162 NDFQFLKDVLQS 173 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccHHHHHHHHhh
Confidence 345666666544
No 330
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=42.73 E-value=2.3e+02 Score=27.28 Aligned_cols=145 Identities=17% Similarity=0.199 Sum_probs=86.4
Q ss_pred CCCCccCHH-HhHhhHhcC-CcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec----CChhhhhhHHHHHHh-----C
Q 010610 272 PSITEKDWD-DIKFGVDNK-VDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI----ESADSIPNLHSIITA-----S 340 (506)
Q Consensus 272 p~ltekD~~-dI~~al~~g-vD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI----Et~~aveNldeIl~~-----s 340 (506)
|..++.++. .++.+++.| +|+|-+-.-... .+.++.+...+ ..++||+-- +|+. .+.+.+++.. +
T Consensus 95 ~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~--~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~ga 170 (257)
T 2yr1_A 95 IPLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEE--CSVWLVVSRHYFDGTPR-KETLLADMRQAERYGA 170 (257)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHH--TTCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHh--CCCEEEEEecCCCCCcC-HHHHHHHHHHHHhcCC
Confidence 345555544 456788888 999998764433 56666554443 345566542 4553 4555555543 5
Q ss_pred CEEEEcCCCcccCCC--CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeE--eec
Q 010610 341 DGAMVARGDLGAELP--IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVM--LSG 416 (506)
Q Consensus 341 DGImIaRGDLgvelg--~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vm--Ls~ 416 (506)
|.+=|+ -++ .+++....+-.-+......+|+|.. +|=.....+| +.+.+. |.-... +..
T Consensus 171 DivKia------~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~-----~MG~~G~~SR-----i~~~~~-GS~~Tf~~l~~ 233 (257)
T 2yr1_A 171 DIAKVA------VMPKSPEDVLVLLQATEEARRELAIPLITM-----AMGGLGAITR-----LAGWLF-GSAVTFAVGNQ 233 (257)
T ss_dssp SEEEEE------ECCSSHHHHHHHHHHHHHHHHHCSSCEEEE-----ECTTTTHHHH-----HHGGGG-TBCEEECBSSS
T ss_pred CEEEEE------eccCCHHHHHHHHHHHHHHhccCCCCEEEE-----ECCCCcchHH-----HHHHHh-CCceEecCCCC
Confidence 866665 233 3355555554333323457898865 4656666666 777665 433332 567
Q ss_pred cccCCCCHHHHHHHHHHHHHH
Q 010610 417 ETAHGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~ 437 (506)
.+|-|..+++-++.+-++...
T Consensus 234 ~sAPGQl~~~el~~~l~~l~~ 254 (257)
T 2yr1_A 234 SSAPGQIPIDDVRTVLSILQT 254 (257)
T ss_dssp CSSTTCCBHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 889999998877766555543
No 331
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=42.71 E-value=2.1e+02 Score=26.49 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=54.7
Q ss_pred CceEEEecC-Ch---hh-hhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcC
Q 010610 317 DIHVIVKIE-SA---DS-IPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVH 390 (506)
Q Consensus 317 ~i~IIaKIE-t~---~a-veNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~ 390 (506)
+++|+.++- ++ .+ .+.++..++. +|+|.++ |+.. ++ -+++++.|+++|..++++- +
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~g~~~~~~i--------~ 141 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREEGIKTVFLA--------A 141 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHHTCEEEEEE--------C
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHhCCCeEEEE--------C
Confidence 355666653 32 11 2344445555 8999994 5543 33 3578899999999988753 1
Q ss_pred CCCChhhcccHHHHHHhCcceeEeeccc--cCCC---CHHHHHHHHHHHHHHH
Q 010610 391 PTPTRAEVSDIAIAVREGADAVMLSGET--AHGK---FPLKAVKVMHTVSLRT 438 (506)
Q Consensus 391 ~~PtRAEv~Dvanav~dG~D~vmLs~ET--A~G~---yPveaV~~m~~I~~~a 438 (506)
+. |.. +...++..++|++++...+ ..|. ++....+.+.++....
T Consensus 142 ~~-t~~---e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~ 190 (248)
T 1geq_A 142 PN-TPD---ERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC 190 (248)
T ss_dssp TT-CCH---HHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC
T ss_pred CC-CHH---HHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc
Confidence 11 222 2455666667744322111 0122 5566677777776544
No 332
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=42.69 E-value=85 Score=30.81 Aligned_cols=122 Identities=10% Similarity=-0.016 Sum_probs=67.5
Q ss_pred HHHHHHHHHcCCcEEEEehhhhhhhcCCCCChh-hcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccc
Q 010610 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRA-EVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATI 442 (506)
Q Consensus 364 k~II~~c~~~GkPvivATqmLeSMi~~~~PtRA-Ev~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~ 442 (506)
.-+...|+..|.++.+.. |..+ ...-+...-..|++.+...++... .++.++.+...+++++-...+
T Consensus 85 ~alA~~a~~~G~~~~iv~-----------p~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~ 152 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILVL-----------RGKEELKGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPY 152 (325)
T ss_dssp HHHHHHHHHTTCEEEEEE-----------ESCCCSCHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEE
T ss_pred HHHHHHHHHhCCcEEEEE-----------CCCCCCCchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceE
Confidence 345678999999988762 1111 122355666789997776533211 112345554444432211111
Q ss_pred cCCCCCCCCCcCcCCChH--HHHHHHHHHHHhhcC--c-eEEEEcCChHHHHHHH----hhCCCCeEEEEeC
Q 010610 443 TGGAMPPNLGQAFKNHMS--EMFAYHATMMSNTLG--T-SIVVFTRTGFMAILLS----HYRPSGTIFAFTN 505 (506)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~--~~ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS----~~RP~~pIia~T~ 505 (506)
.. + .+ . .++. +.....+.++.++++ . .||+..-+|.|+--++ .+.|.+.|++|-+
T Consensus 153 ~~----p--~~-~-~n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~ 216 (325)
T 1j0a_A 153 VI----P--PG-G-ASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAV 216 (325)
T ss_dssp EE----C--GG-G-CSHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred EE----c--CC-C-CCHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence 11 0 00 1 1221 122334667888875 4 8899888998876555 4579999999865
No 333
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=42.43 E-value=30 Score=33.91 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCe
Q 010610 123 REMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPE 178 (506)
Q Consensus 123 ~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPk 178 (506)
.+..++|++.|.++.=+|+--...++..++...|+.+.+..+ ++|.+|+.=|+
T Consensus 37 ~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~---~pisIDT~~~~ 89 (271)
T 2yci_X 37 QEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD---LPCCLDSTNPD 89 (271)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC---CCEEEECSCHH
T ss_pred HHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC---CeEEEeCCCHH
Confidence 345678999999999999977777888889888888876654 66788976554
No 334
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=42.24 E-value=41 Score=33.32 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=42.0
Q ss_pred CCccCHHH-hHhhHhcCCcEEEEccCC------------------C--------HHHHHHHHHHHHhcCCCceEEE--ec
Q 010610 274 ITEKDWDD-IKFGVDNKVDFYAVSFVK------------------D--------AQVVHELKNYLKSCGADIHVIV--KI 324 (506)
Q Consensus 274 ltekD~~d-I~~al~~gvD~IalSfV~------------------s--------aedV~~lr~~l~~~~~~i~IIa--KI 324 (506)
+++.|... .+.+.+.|+|+|.++--. + .+.+.++++.+ +.+++||+ -|
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~~~ipVi~~GGI 298 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---NGRLPIIGVGGI 298 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---TTSSCEEEESSC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---CCCCCEEEECCC
Confidence 44444333 356778999999987320 1 13334444433 44677877 57
Q ss_pred CChhhhhhHHHHHHh-CCEEEEcCCCc
Q 010610 325 ESADSIPNLHSIITA-SDGAMVARGDL 350 (506)
Q Consensus 325 Et~~aveNldeIl~~-sDGImIaRGDL 350 (506)
-|.+-+. +.++. +|+|++||+=|
T Consensus 299 ~~~~da~---~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 299 DSVIAAR---EKIAAGASLVQIYSGFI 322 (336)
T ss_dssp CSHHHHH---HHHHHTCSEEEESHHHH
T ss_pred CCHHHHH---HHHHCCCCEEEeeHHHH
Confidence 7765443 33333 99999998743
No 335
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=42.23 E-value=65 Score=31.22 Aligned_cols=139 Identities=16% Similarity=0.097 Sum_probs=73.2
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHH-HHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccC----
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQV-VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAE---- 353 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saed-V~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgve---- 353 (506)
.+.++.+.+.|+|+|-.+|+.+..+ ++.+++ .+..+.+++.+.|++-.... .-.-+|.|-+- |.=+..
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~----~~~~i~l~~~v~~~~~~~~a--~~~Gad~I~v~-G~~~~g~~~e 162 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHIDK----WKFKVPFVCGARNLGEALRR--IAEGAAMIRTK-GEAGTGNVVE 162 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG----GGCSSCEEEEESSHHHHHHH--HHTTCSEEEEC-CCSSSCCTHH
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHH----hCCCceEEeecCCHHHHHHH--HHcCCCEEEEc-ccccCcchHH
Confidence 5678888899999998777654322 222222 22357788777776543221 11226776552 321100
Q ss_pred -----------------C-CCCc------HHHHHHHHHHHHHHcCCcEE--EEehhhhhhhcCCCCChhhcccHHHHHHh
Q 010610 354 -----------------L-PIEE------VPLLQEEIIRTCRSMGKAVI--VATNMLESMIVHPTPTRAEVSDIAIAVRE 407 (506)
Q Consensus 354 -----------------l-g~e~------V~~~Qk~II~~c~~~GkPvi--vATqmLeSMi~~~~PtRAEv~Dvanav~d 407 (506)
+ |... .+...+.+-+.+...+.|++ ... ..-+ ..|+..+...
T Consensus 163 ~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~G---------GI~~---~e~i~~~~~a 230 (297)
T 2zbt_A 163 AVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAG---------GIAT---PADAALMMHL 230 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCS---------SCCS---HHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeC---------CCCC---HHHHHHHHHc
Confidence 0 0000 00001122222334467765 221 1212 2467778888
Q ss_pred CcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 408 GADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 408 G~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
|+|++++..--.....|.++++.+.+.+.
T Consensus 231 GadgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 231 GMDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp TCSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred CCCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 99999985332223458888888876654
No 336
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=42.10 E-value=2.9e+02 Score=28.00 Aligned_cols=38 Identities=18% Similarity=0.377 Sum_probs=29.2
Q ss_pred ccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 399 SDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 399 ~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
.|+......|+|++|...-...-..|.++++.+.....
T Consensus 255 eda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~ 292 (330)
T 2yzr_A 255 ADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATY 292 (330)
T ss_dssp HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHH
Confidence 45677788899999986555455779999988887764
No 337
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=42.10 E-value=51 Score=32.87 Aligned_cols=60 Identities=12% Similarity=0.106 Sum_probs=40.8
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 109 KTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
+....+++|- .+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++ .| ..+.|++|.
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQA---VG-DDFGIMVDY 196 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---hC-CCCEEEEEC
Confidence 4455556552 2343 44567789999999999998887777777777765 34 345566774
No 338
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=42.00 E-value=82 Score=29.87 Aligned_cols=66 Identities=12% Similarity=0.173 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 304 V~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
++.+.+.+.+.|..+.+.+--+... -+|+++++.-+|.|+.+-++ +.....+.+.|++.|+|++.+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 4555666766677766655433333 25788888889999887322 236678889999999999876
No 339
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=41.95 E-value=1.2e+02 Score=28.67 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=41.5
Q ss_pred HHHH-HHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccccCCCCHHHHHHHHHHH
Q 010610 359 VPLL-QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGKFPLKAVKVMHTV 434 (506)
Q Consensus 359 V~~~-Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ETA~G~yPveaV~~m~~I 434 (506)
...+ -...++.++++|++|.+.| ++ +-.+... ++..|+|+|+- +||..+.+.+.+.
T Consensus 178 ~~~~~~~~~v~~~~~~G~~v~~wT------vn-------~~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~ 235 (248)
T 1zcc_A 178 PAQMRRPGIIEASRKAGLEIMVYY------GG-------DDMAVHREIATSDVDYINL-------DRPDLFAAVRSGM 235 (248)
T ss_dssp HHHHHSHHHHHHHHHHTCEEEEEC------CC-------CCHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHCCCEEEEEC------CC-------CHHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHh
Confidence 3444 5789999999999999998 11 1234667 77889999875 4898887777643
No 340
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=41.84 E-value=38 Score=36.21 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=42.8
Q ss_pred HHHhHhhHhcCCcEEEEccCC---------CHHHHHHHHHHHHhc--CCCceEEE--ecCChhhhhhHHHHHHhCCEEEE
Q 010610 279 WDDIKFGVDNKVDFYAVSFVK---------DAQVVHELKNYLKSC--GADIHVIV--KIESADSIPNLHSIITASDGAMV 345 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~---------saedV~~lr~~l~~~--~~~i~IIa--KIEt~~aveNldeIl~~sDGImI 345 (506)
.++.+.+.+.|+|+|.+|--. +.+-+.++++.+.+. +.++.||+ .|-+.+-+ +..|..=+|+|||
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv--~kaLalGAdaV~i 431 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDV--LKALCLGAKGVGL 431 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHH--HHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHH--HHHHHcCCCEEEE
Confidence 577888899999999996321 123445555555432 24688888 45554332 3333333999999
Q ss_pred cCC
Q 010610 346 ARG 348 (506)
Q Consensus 346 aRG 348 (506)
||.
T Consensus 432 Gr~ 434 (511)
T 1kbi_A 432 GRP 434 (511)
T ss_dssp CHH
T ss_pred CHH
Confidence 994
No 341
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=41.77 E-value=65 Score=28.99 Aligned_cols=58 Identities=14% Similarity=0.203 Sum_probs=41.4
Q ss_pred EecCCCEEEEEEec--CC---CCceEEEeccchhhhh---cCCCCEEEEeCCeEEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQR--GV---GSAECVSVNYDDFVND---VEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~---~~~~~i~v~~~~l~~~---v~~Gd~IliDDG~i~l~V~~~~~~~v~~ 248 (506)
-++.|++.+|+... .. +.+....++...|... +++|+.+.+++ . ...|++++++.|..
T Consensus 63 gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (157)
T ss_dssp HCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEEEE
Confidence 57899999998863 23 3345667777778752 56799999964 3 46888998887643
No 342
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=41.74 E-value=20 Score=30.42 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEE
Q 010610 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 300 saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPviv 379 (506)
|.-=+..++++.++.|-++.+.+ .+...+++.+.-.|.|++| +.+....+++-+.|...|+||.+
T Consensus 19 Tsllv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 19 SAQLANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 33456777888888887777776 2333456666778999997 25666777888889899999987
Q ss_pred E
Q 010610 380 A 380 (506)
Q Consensus 380 A 380 (506)
-
T Consensus 84 I 84 (108)
T 3nbm_A 84 T 84 (108)
T ss_dssp C
T ss_pred e
Confidence 4
No 343
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=41.42 E-value=60 Score=31.30 Aligned_cols=66 Identities=6% Similarity=0.135 Sum_probs=42.0
Q ss_pred CHHHhHhhHhcCCcEEEEcc------CCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh---CCEEEEcC
Q 010610 278 DWDDIKFGVDNKVDFYAVSF------VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---SDGAMVAR 347 (506)
Q Consensus 278 D~~dI~~al~~gvD~IalSf------V~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---sDGImIaR 347 (506)
+++.+..+++.|+|+|.+.. --+.+...++...+...+.++.+|+ | .|+.+.+++... +||++||.
T Consensus 163 ~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--e--gGI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 163 TERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--E--SGYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp SHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--E--SCCCSHHHHHTTTTTCSEEEECH
T ss_pred CHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--E--cCCCCHHHHHHHHcCCCEEEEeH
Confidence 55677788899999998843 3344555555555543222566776 2 355555555554 78999984
No 344
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=41.20 E-value=2.2e+02 Score=26.27 Aligned_cols=108 Identities=5% Similarity=-0.038 Sum_probs=60.5
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEEEcCCCcccCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARGDLGAEL 354 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGImIaRGDLgvel 354 (506)
.++++.+++.|+|||..|. .+.+-++..+. + | +.++.-+. +.+|+.++ +|.+-+-++. .+
T Consensus 73 ~d~~~~A~~~GAd~v~~~~-~d~~v~~~~~~-~---g--~~~i~G~~------t~~e~~~A~~~Gad~v~~fpa~---~~ 136 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVSPG-LLEEVAALAQA-R---G--VPYLPGVL------TPTEVERALALGLSALKFFPAE---PF 136 (207)
T ss_dssp HHHHHHHHHHTCSEEEESS-CCHHHHHHHHH-H---T--CCEEEEEC------SHHHHHHHHHTTCCEEEETTTT---TT
T ss_pred HHHHHHHHHcCCCEEEcCC-CCHHHHHHHHH-h---C--CCEEecCC------CHHHHHHHHHCCCCEEEEecCc---cc
Confidence 3678888999999999884 34433333333 2 3 23444344 44555443 7988884411 11
Q ss_pred -CCCcHHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCC
Q 010610 355 -PIEEVPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 422 (506)
Q Consensus 355 -g~e~V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~ 422 (506)
|+ ...+ ..+... +.|++-..-+ + ..++..++..|+|++...+--..++
T Consensus 137 gG~----~~lk---~l~~~~~~ipvvaiGGI----------~---~~n~~~~l~aGa~~vavgSai~~~d 186 (207)
T 2yw3_A 137 QGV----RVLR---AYAEVFPEVRFLPTGGI----------K---EEHLPHYAALPNLLAVGGSWLLQGN 186 (207)
T ss_dssp THH----HHHH---HHHHHCTTCEEEEBSSC----------C---GGGHHHHHTCSSBSCEEESGGGSSC
T ss_pred cCH----HHHH---HHHhhCCCCcEEEeCCC----------C---HHHHHHHHhCCCcEEEEehhhhCCC
Confidence 11 1112 223334 6887644321 1 2368889999999998765544443
No 345
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=41.10 E-value=1e+02 Score=29.71 Aligned_cols=65 Identities=18% Similarity=0.428 Sum_probs=30.9
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcC-CCceEEEecCChhhhhhHHHHHHh-CCEEEE
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-ADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~-~~i~IIaKIEt~~aveNldeIl~~-sDGImI 345 (506)
+.++.+...|+|+|.+=.=....+...+.+.+.... ....+++.|-..+. ..+..++.. .||||+
T Consensus 28 ~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~~~-~di~~~ld~G~~gI~l 94 (261)
T 3qz6_A 28 DIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDR-AHVQRLLDIGAEGFMI 94 (261)
T ss_dssp THHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCCCH-HHHHHHHhcCCCEEEE
Confidence 344555667778777654333333333443332211 12345555554433 234444443 556664
No 346
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=41.03 E-value=63 Score=33.10 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=45.3
Q ss_pred HhHhhHhcCCcEEEEc-------cCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 281 DIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 281 dI~~al~~gvD~IalS-------fV~saedV~~lr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDGImIaRG 348 (506)
.++|.++.|+|+|.+. .....|..+-++..++..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 85 lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 85 LVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3467889999999872 33334444445555566677889999764 55666655555544 899998754
No 347
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=40.94 E-value=1.7e+02 Score=28.92 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=55.1
Q ss_pred CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcC-CcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccc
Q 010610 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMG-KAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (506)
Q Consensus 340 sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~G-kPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ET 418 (506)
+|.||--....|-..|+.. +...+.+++. ... .|||++.. +-|. +|++.++..|+|+|++..=.
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LGLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CCSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHH
Confidence 6778764444555555555 3333333221 234 89998753 3333 47999999999999998777
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 010610 419 AHGKFPLKAVKVMHTVSLR 437 (506)
Q Consensus 419 A~G~yPveaV~~m~~I~~~ 437 (506)
+.++.|.+-.+.|..-++.
T Consensus 211 ~~a~dP~~ma~af~~Av~a 229 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVEA 229 (268)
T ss_dssp HTSSSHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHH
Confidence 8889998777777665433
No 348
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=40.68 E-value=1.6e+02 Score=28.41 Aligned_cols=116 Identities=17% Similarity=0.058 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |.......+...-..|++.+...++ +.| -++++...+++++-. . ++
T Consensus 79 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~~~~~~~-~-~~ 141 (303)
T 1o58_A 79 AIAMIGAKRGHRVILTM-----------PETMSVERRKVLKMLGAELVLTPGE---LGM-KGAVEKALEISRETG-A-HM 141 (303)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGG---GHH-HHHHHHHHHHHHHHC-C-BC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhcC-e-Ee
Confidence 45677899999988762 2222223455667789987775432 113 366666666654431 1 11
Q ss_pred CCCCCCCCcCcCCChHHH---HHHHHHHHHhhcC--c-eEEEEcCChHHHHHHHhh----CCC-CeEEEEeC
Q 010610 445 GAMPPNLGQAFKNHMSEM---FAYHATMMSNTLG--T-SIVVFTRTGFMAILLSHY----RPS-GTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~---ia~~av~~A~~~~--a-~Iiv~T~sG~tA~~lS~~----RP~-~pIia~T~ 505 (506)
...|. ++... ....+.++.++++ . .|++.+-+|.++--++++ .|. ..|+++.+
T Consensus 142 ~~~~~--------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~ 205 (303)
T 1o58_A 142 LNQFE--------NPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEP 205 (303)
T ss_dssp CCTTT--------CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEE
T ss_pred CCCCC--------CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEec
Confidence 11111 22111 1223567777775 5 899999999987666643 588 89999875
No 349
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=40.26 E-value=1.6e+02 Score=27.28 Aligned_cols=100 Identities=13% Similarity=0.188 Sum_probs=57.4
Q ss_pred CHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecC-------ChhhhhhHHHHHHhCCEEEEcCCC
Q 010610 278 DWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIE-------SADSIPNLHSIITASDGAMVARGD 349 (506)
Q Consensus 278 D~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIE-------t~~aveNldeIl~~sDGImIaRGD 349 (506)
|.+++ +.+.++|++.++++-. +.++...+.++.++.. ++...+-+= +.+.++.|++.+...-.+ |=|.
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~--~iGE 95 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS-SCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVV--AIGE 95 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST-TEEEEECCCGGGGGGCCHHHHHHHHHHHTSTTEE--EEEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC-CEEEEEEECCcccccCCHHHHHHHHHHhcCCCeE--EEEE
Confidence 44444 5677899998776543 5788888877766543 332222221 012344555554322233 3355
Q ss_pred cccCCCCC-cHHHHH----HHHHHHHHHcCCcEEEEe
Q 010610 350 LGAELPIE-EVPLLQ----EEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 350 Lgvelg~e-~V~~~Q----k~II~~c~~~GkPvivAT 381 (506)
.|.+.... .-...| +..++.|++.|+||++.|
T Consensus 96 ~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~ 132 (264)
T 1xwy_A 96 CGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC 132 (264)
T ss_dssp EEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 55555322 112344 356788999999999987
No 350
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=40.20 E-value=2.2e+02 Score=26.09 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=64.9
Q ss_pred CCCCcc--CHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEe-----------cCChhhhhhHHHHH
Q 010610 272 PSITEK--DWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK-----------IESADSIPNLHSII 337 (506)
Q Consensus 272 p~ltek--D~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaK-----------IEt~~aveNldeIl 337 (506)
|..+.. +...+ +.+.+.|+++|.+ .+++.++.+++.. +++++.- |+. -.+.+++.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~ 98 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLA 98 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHH
Confidence 334444 44444 5566889999976 4788888887653 3444421 221 234566666
Q ss_pred Hh-CCEEEEcCCCcccCCCC-CcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCccee
Q 010610 338 TA-SDGAMVARGDLGAELPI-EEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV 412 (506)
Q Consensus 338 ~~-sDGImIaRGDLgvelg~-e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~v 412 (506)
+. +|.|.+.-.-+.- |. +.+ .++++.+++. ++++++-.. |.. +...+...|+|.+
T Consensus 99 ~~Gad~V~l~~~~~~~--~~~~~~----~~~i~~i~~~~~~~~v~~~~~-----------t~~---ea~~a~~~Gad~i 157 (234)
T 1yxy_A 99 ALNIAVIAMDCTKRDR--HDGLDI----ASFIRQVKEKYPNQLLMADIS-----------TFD---EGLVAHQAGIDFV 157 (234)
T ss_dssp TTTCSEEEEECCSSCC--TTCCCH----HHHHHHHHHHCTTCEEEEECS-----------SHH---HHHHHHHTTCSEE
T ss_pred HcCCCEEEEcccccCC--CCCccH----HHHHHHHHHhCCCCeEEEeCC-----------CHH---HHHHHHHcCCCEE
Confidence 55 7988776322110 10 122 4677777777 788775421 222 2567888999998
No 351
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=40.18 E-value=2.2e+02 Score=28.23 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=70.2
Q ss_pred hcCCcEEEEccCCC--------------HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCccc
Q 010610 287 DNKVDFYAVSFVKD--------------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 352 (506)
Q Consensus 287 ~~gvD~IalSfV~s--------------aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgv 352 (506)
+.++.+|+-+..+. .+-++.++++.++. .+.+++-+-+++.++-+.+ .+|.+-||-+++
T Consensus 46 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~-- 118 (288)
T 3tml_A 46 KLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC-- 118 (288)
T ss_dssp HHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT--
T ss_pred HcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECcccc--
Confidence 45888888754442 35677777777654 4678888888877766655 489999985543
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-Cc------ceeEeec
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-GA------DAVMLSG 416 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-G~------D~vmLs~ 416 (506)
...+ +++++.+.||||++.|.|. -|-.|+...+..+.. |. +-++|..
T Consensus 119 ----~n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~e 172 (288)
T 3tml_A 119 ----RQTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACE 172 (288)
T ss_dssp ----TCHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred ----cCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEe
Confidence 2333 3556668999999987653 245677667776654 55 5577653
No 352
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=40.10 E-value=57 Score=31.64 Aligned_cols=52 Identities=10% Similarity=0.195 Sum_probs=33.8
Q ss_pred CHHHHHHHHHhCCcEEEEeCCC---------CCh-HHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 122 TREMIWKLAEAGMNVARLNMSH---------GDH-ASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SH---------g~~-e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
+.+.|+.|-+.|+|++||-++. +.. +...+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G---i~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND---LVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 5889999999999999997752 221 222333333333344555 778889865
No 353
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=40.09 E-value=1.1e+02 Score=30.29 Aligned_cols=89 Identities=17% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHhCcceeEeec
Q 010610 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGADAVMLSG 416 (506)
Q Consensus 340 sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~dG~D~vmLs~ 416 (506)
+||+++. |-- +..+..++-..+.+..++.++. ..|||.-| ...+-.|.-+ ...|-..|+|++|+..
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGT---------GANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 7999985 211 1223333444444444444432 36888765 2333445444 4456778999999874
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE 439 (506)
=--...-+-+.++....|+..+.
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 43333345678899999988774
No 354
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=39.59 E-value=45 Score=32.29 Aligned_cols=52 Identities=13% Similarity=0.109 Sum_probs=33.4
Q ss_pred CHHHHHHHHH-hCCcEEEEeCCCC------ChHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 122 TREMIWKLAE-AGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 122 ~~e~i~~li~-aGm~v~RiN~SHg------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+.| +.+++|+-+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G---l~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG---LYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT---CEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC---CEEEEEecC
Confidence 4678998986 7999999987642 22223344444444445555 778888754
No 355
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=39.52 E-value=2.6e+02 Score=27.28 Aligned_cols=108 Identities=12% Similarity=0.125 Sum_probs=74.0
Q ss_pred CHHHhHh-hHhcCCcEEEE-----ccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhh---hHHHHHHh-CCEEEEcC
Q 010610 278 DWDDIKF-GVDNKVDFYAV-----SFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIP---NLHSIITA-SDGAMVAR 347 (506)
Q Consensus 278 D~~dI~~-al~~gvD~Ial-----SfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~ave---NldeIl~~-sDGImIaR 347 (506)
|...+.. ..+.|+++|.+ -|-.+.+++..+++.+ +++|+.|= .+- .+++.... +|+|++.-
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~Kd----fi~d~~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRKD----FLFDPYQVYEARSWGADCILIIM 150 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEES----CCCSTHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEECC----ccCCHHHHHHHHHcCCCEEEEcc
Confidence 5555543 44679999987 3557899998888653 57787761 111 34554444 89999876
Q ss_pred CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 348 GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 348 GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
.+| + ..--++++..|+..|.-+++-++ +..| +..+...|+|.|-.++
T Consensus 151 a~L----~----~~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 151 ASV----D----DDLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVNN 197 (272)
T ss_dssp TTS----C----HHHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEEC
T ss_pred ccc----C----HHHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEECC
Confidence 665 1 23457888999999999887754 3333 5577888999887664
No 356
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=39.33 E-value=39 Score=33.27 Aligned_cols=142 Identities=18% Similarity=0.196 Sum_probs=81.8
Q ss_pred CCCCccCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH--------hCCE
Q 010610 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT--------ASDG 342 (506)
Q Consensus 272 p~ltekD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~--------~sDG 342 (506)
|..|+.|.+.+ +.+.++|++.|+++ +.-+..+++.|+ +..+.|.+=|=-|.|-...+.-+. =+|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 45577776554 67888999999884 566778888884 455777776656655543333222 1454
Q ss_pred EEEcCCCcccCCCC---CcHHHHH---HHHHHHHHHcCCc--EEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeE
Q 010610 343 AMVARGDLGAELPI---EEVPLLQ---EEIIRTCRSMGKA--VIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVM 413 (506)
Q Consensus 343 ImIaRGDLgvelg~---e~V~~~Q---k~II~~c~~~GkP--vivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vm 413 (506)
|=+ -+.+|. .+...+. +.+.++|. |+| ||+-|-. -|..|+...+. +...|+|.|=
T Consensus 128 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVK 191 (260)
T 3r12_A 128 IDM-----VINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKVIIETCY---------LDTEEKIAACVISKLAGAHFVK 191 (260)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEE-----EeehhhhccccHHHHHHHHHHHHHhcC--CCcEEEEEeCCC---------CCHHHHHHHHHHHHHhCcCEEE
Confidence 422 123332 1333444 44444443 444 3443332 25667666555 5667999987
Q ss_pred eeccccCCCCHHHHHHHHHHHH
Q 010610 414 LSGETAHGKFPLKAVKVMHTVS 435 (506)
Q Consensus 414 Ls~ETA~G~yPveaV~~m~~I~ 435 (506)
-|.==..|.--++.|+.|++.+
T Consensus 192 TSTGf~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 192 TSTGFGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp CCCSSSSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHh
Confidence 6611112233568999998875
No 357
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=39.32 E-value=30 Score=33.24 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=33.6
Q ss_pred CHHHHHHHHHhCCcEEEEeCCCCC--hHHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 122 TREMIWKLAEAGMNVARLNMSHGD--HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SHg~--~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
..+.++.|-+.|+|++|+-++.|. .+...+.++.+=+...+.| +.+++|+-+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK---MVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT---CEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC---CEEEEEeccC
Confidence 467899999999999999886441 1112223333333444555 7788897653
No 358
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=38.99 E-value=1.7e+02 Score=28.70 Aligned_cols=95 Identities=18% Similarity=0.067 Sum_probs=55.2
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccH-HHHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDI-AIAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dv-anav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++ -..|||.-| ...+-.|.-+. -.|-..|+
T Consensus 39 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHV---------GCVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhCCC
Confidence 333444 7999985 221 122333344444444444443 247888765 23333454443 44666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 108 DAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999987443334445777889999988876
No 359
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=38.88 E-value=2.4e+02 Score=26.06 Aligned_cols=131 Identities=12% Similarity=0.130 Sum_probs=65.9
Q ss_pred cCHHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCCceEEE-----ecCCh--------hhhhhHHHHHHh-C
Q 010610 277 KDWDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIV-----KIESA--------DSIPNLHSIITA-S 340 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~i~IIa-----KIEt~--------~aveNldeIl~~-s 340 (506)
.+.++++.+++.|+|+|.+.- .++++.+.++ ...+..+.+-. ++++. ...+-+..+.+. +
T Consensus 83 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~----~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 158 (241)
T 1qo2_A 83 RSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL----REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGL 158 (241)
T ss_dssp CSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH----HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHCCCCEEEECchHhhChHHHHHH----HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCC
Confidence 356678888889999998753 2344444444 33343332212 23332 112222333333 6
Q ss_pred CEEEEcC-CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh-----C-cceeE
Q 010610 341 DGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-----G-ADAVM 413 (506)
Q Consensus 341 DGImIaR-GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-----G-~D~vm 413 (506)
+.|++-. +-=+...|+ .+. ..+++ ++...+|||... ..-+.. |+...... | +|++|
T Consensus 159 ~~i~~t~~~~~g~~~g~-~~~-~i~~l---~~~~~iPvia~G---------GI~~~~---d~~~~~~~~~~~~G~adgv~ 221 (241)
T 1qo2_A 159 EEIVHTEIEKDGTLQEH-DFS-LTKKI---AIEAEVKVLAAG---------GISSEN---SLKTAQKVHTETNGLLKGVI 221 (241)
T ss_dssp CEEEEEETTHHHHTCCC-CHH-HHHHH---HHHHTCEEEEES---------SCCSHH---HHHHHHHHHHHTTTSEEEEE
T ss_pred CEEEEEeecccccCCcC-CHH-HHHHH---HHhcCCcEEEEC---------CCCCHH---HHHHHHhcccccCCeEeEEE
Confidence 7777732 100111122 222 22223 334489999764 333433 45555555 9 99999
Q ss_pred eeccccCCCCHHHHH
Q 010610 414 LSGETAHGKFPLKAV 428 (506)
Q Consensus 414 Ls~ETA~G~yPveaV 428 (506)
...=--.|+++.+.+
T Consensus 222 vgsal~~~~~~~~~~ 236 (241)
T 1qo2_A 222 VGRAFLEGILTVEVM 236 (241)
T ss_dssp ECHHHHTTSSCHHHH
T ss_pred eeHHHHcCCCCHHHH
Confidence 865445566665543
No 360
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=38.68 E-value=83 Score=31.52 Aligned_cols=68 Identities=25% Similarity=0.338 Sum_probs=47.5
Q ss_pred CCceEEEecC--CCCCC-----------HHHHHHHHHhCCcEEEEeC-CC--CC-----hHHHHHHHHHHHHHHHhcCCc
Q 010610 108 RKTKIVCTIG--PSTNT-----------REMIWKLAEAGMNVARLNM-SH--GD-----HASHQKVIDLVKEYNAQSKDN 166 (506)
Q Consensus 108 r~tKIi~TiG--Pss~~-----------~e~i~~li~aGm~v~RiN~-SH--g~-----~e~~~~~i~~ir~~~~~~~~~ 166 (506)
.+|+|++-|. |-|-+ .+..++|+++|.++.=||. |- |. .|++.+++..|+.+.++.+
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~-- 85 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD-- 85 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC--
Confidence 6788888774 42221 3456789999999999998 42 32 3889988888888876654
Q ss_pred eEEEEeecCCCe
Q 010610 167 VIAIMLDTKGPE 178 (506)
Q Consensus 167 ~i~Il~DL~GPk 178 (506)
+.|.+|+-=|+
T Consensus 86 -vpiSIDT~~~~ 96 (314)
T 2vef_A 86 -VLISIDTWKSQ 96 (314)
T ss_dssp -CEEEEECSCHH
T ss_pred -ceEEEeCCCHH
Confidence 67888986665
No 361
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=38.51 E-value=57 Score=32.39 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=47.6
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEEEcC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGImIaR 347 (506)
.+.++.+++.|+|+|.+.- -+++++.++++.+.....+++|.| -| -.+|+.++++. +|+|-++.
T Consensus 207 lee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~I~ASGGI----t~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 207 LQEAVQAAEAGADLVLLDN-FKPEELHPTATVLKAQFPSVAVEASGGI----TLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEEESSC----CTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeeEEEECCC----CHHHHHHHHHCCCCEEEECh
Confidence 4567788899999999987 468999988888875445565554 23 23678888877 89988874
No 362
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=38.19 E-value=55 Score=31.03 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=62.0
Q ss_pred cEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEcCCCcccCCCCCcHHHHHHHHHH
Q 010610 291 DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIR 368 (506)
Q Consensus 291 D~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIaRGDLgvelg~e~V~~~Qk~II~ 368 (506)
..+..|| +.+.+..+++. ..++.+..-.+... .+..+.+.. ++++-.. + ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~---------~---~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKAL----WPEIARGYNVSAIP--SAWQERLEHLDCAGLHIH---------Q---SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHH----CTTSCEEEECSSCC--TTHHHHHHHHTCSEEEEE---------G---GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEecCc--hhHHHHHHHcCCeEEecc---------h---hhCCHHHHH
Confidence 3677787 66666666654 34444444343211 122333332 3444332 1 122357899
Q ss_pred HHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHH
Q 010610 369 TCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 432 (506)
Q Consensus 369 ~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~ 432 (506)
.|+++|++|.+-|- -+-.+...++..|+|+|+- +||..+.+.+.
T Consensus 205 ~~~~~G~~v~~WTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI-------------NDESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp HHHHTTCEEEEECC-------------CCHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 99999999999971 1223467788899999886 58988777664
No 363
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=37.88 E-value=2.8e+02 Score=28.12 Aligned_cols=115 Identities=17% Similarity=0.110 Sum_probs=65.4
Q ss_pred CCCCccCHHHh--------HhhHhcCCcEEEEccCC-------------C----------------HHHHHHHHHHHHhc
Q 010610 272 PSITEKDWDDI--------KFGVDNKVDFYAVSFVK-------------D----------------AQVVHELKNYLKSC 314 (506)
Q Consensus 272 p~ltekD~~dI--------~~al~~gvD~IalSfV~-------------s----------------aedV~~lr~~l~~~ 314 (506)
-.||..|++.+ +.+.+.|+|+|=+-.-. . .+-++++|+.+
T Consensus 149 r~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v--- 225 (361)
T 3gka_A 149 RALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW--- 225 (361)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH---
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc---
Confidence 36888888877 45678999999875442 2 12333344433
Q ss_pred CCCceEEEecCChh---h------hhhHHHHHHh-----CCEEEEcCCCcccCCCCCcHHHHHHHHHHHH-HHcCCcEEE
Q 010610 315 GADIHVIVKIESAD---S------IPNLHSIITA-----SDGAMVARGDLGAELPIEEVPLLQEEIIRTC-RSMGKAVIV 379 (506)
Q Consensus 315 ~~~i~IIaKIEt~~---a------veNldeIl~~-----sDGImIaRGDLgvelg~e~V~~~Qk~II~~c-~~~GkPviv 379 (506)
+.+ .|..||=--+ + ++...++++. +|.|-+..|..+ .+ + ++.. +..++|+|.
T Consensus 226 g~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~-~-------~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 226 SAA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGG----DA-I-------GQQLKAAFGGPFIV 292 (361)
T ss_dssp CGG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCST----TC-C-------HHHHHHHHCSCEEE
T ss_pred CCC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC----HH-H-------HHHHHHHcCCCEEE
Confidence 445 6777874321 1 2333333332 688877766522 11 1 1221 234689887
Q ss_pred EehhhhhhhcCCCCChhhcccHHHHHHhC-cceeEee
Q 010610 380 ATNMLESMIVHPTPTRAEVSDIAIAVREG-ADAVMLS 415 (506)
Q Consensus 380 ATqmLeSMi~~~~PtRAEv~Dvanav~dG-~D~vmLs 415 (506)
... . |.. +...++..| +|+|++.
T Consensus 293 ~Gg---------i-t~e---~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 293 NEN---------F-TLD---SAQAALDAGQADAVAWG 316 (361)
T ss_dssp ESS---------C-CHH---HHHHHHHTTSCSEEEES
T ss_pred eCC---------C-CHH---HHHHHHHcCCccEEEEC
Confidence 642 2 332 355677787 9999984
No 364
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=37.71 E-value=1e+02 Score=29.57 Aligned_cols=76 Identities=14% Similarity=0.143 Sum_probs=45.4
Q ss_pred hhhhh--cCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeCCCCccccCCCccCCCCCCccCH--HHhHhhHhc
Q 010610 216 DFVND--VEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW--DDIKFGVDN 288 (506)
Q Consensus 216 ~l~~~--v~~Gd~IliDDG---~i~l~V~~~~~~~v~~~V~~gG~L~s~KgVnlp~~~~~lp~ltekD~--~dI~~al~~ 288 (506)
.+.+. +++||.|.+-|| ....+|.+++++.+.+++...-.......+. ..+ ...+...|+ ..|+.+.+.
T Consensus 27 Hl~~VLR~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~---v~L-~~al~K~~r~e~ilqkatEL 102 (251)
T 4e8b_A 27 HIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLH---IHL-GQVMSRGEKMEFTIQKSIEL 102 (251)
T ss_dssp HHHTTSCCCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSE---EEE-EEECCSSSHHHHHHHHHHHT
T ss_pred HHHHhCcCCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCce---EEE-EEEeechhHHHHHHHHHHhh
Confidence 44443 578999988664 4567888999999888876422221111111 111 122333343 456789999
Q ss_pred CCcEEEE
Q 010610 289 KVDFYAV 295 (506)
Q Consensus 289 gvD~Ial 295 (506)
||+-|..
T Consensus 103 Gv~~I~p 109 (251)
T 4e8b_A 103 GVSLITP 109 (251)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9998753
No 365
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.61 E-value=2.4e+02 Score=25.80 Aligned_cols=90 Identities=11% Similarity=0.021 Sum_probs=61.6
Q ss_pred HHHhHhhHhcCCcEEEEccC---------------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----
Q 010610 279 WDDIKFGVDNKVDFYAVSFV---------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---- 339 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV---------------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---- 339 (506)
.+.++.+.+.|.|+|=+... .+.+++.++++.+++.|-.+..+.-- ....++.+...++.
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHc
Confidence 34567888999999988643 35788999999999988765443321 11244555555554
Q ss_pred -CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 340 -SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 340 -sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
++.|.+.+|. + ..+++...|+++|..+.+=
T Consensus 104 Ga~~v~~~~~~-------~----~~~~l~~~a~~~gv~l~~E 134 (262)
T 3p6l_A 104 DLEFITCEPAL-------S----DWDLVEKLSKQYNIKISVH 134 (262)
T ss_dssp TCSEEEECCCG-------G----GHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEecCCH-------H----HHHHHHHHHHHhCCEEEEE
Confidence 5788887652 2 2378889999999877654
No 366
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=37.49 E-value=83 Score=31.33 Aligned_cols=69 Identities=16% Similarity=0.255 Sum_probs=47.6
Q ss_pred CCceEEEecCCCC--CC-----------HHHHHHHHHhCCcEEEEeCCC--------CChHHHHHHHHHHHHHHHhcCCc
Q 010610 108 RKTKIVCTIGPST--NT-----------REMIWKLAEAGMNVARLNMSH--------GDHASHQKVIDLVKEYNAQSKDN 166 (506)
Q Consensus 108 r~tKIi~TiGPss--~~-----------~e~i~~li~aGm~v~RiN~SH--------g~~e~~~~~i~~ir~~~~~~~~~ 166 (506)
.+++|++=+.-.- .+ .+..++|++.|.++.=||.-- ...|++.+++..|+.+.++.+
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~-- 115 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-- 115 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC--
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--
Confidence 3567877775322 11 345678999999999999732 125788888888887776654
Q ss_pred eEEEEeecCCCee
Q 010610 167 VIAIMLDTKGPEV 179 (506)
Q Consensus 167 ~i~Il~DL~GPkI 179 (506)
++|.+|+.-|++
T Consensus 116 -vpiSIDT~~~~V 127 (297)
T 1tx2_A 116 -LPISIDTYKAEV 127 (297)
T ss_dssp -SCEEEECSCHHH
T ss_pred -ceEEEeCCCHHH
Confidence 567889876654
No 367
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=37.47 E-value=1.5e+02 Score=28.89 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=53.9
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccH-HHHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDI-AIAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dv-anav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++. ..|||.-|- ..+-.|.-+. -.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGTG---------GNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 333444 7999985 211 1223333433444444444322 478887652 3344454444 44667799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987443333445677888888887664
No 368
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=37.42 E-value=1.1e+02 Score=28.95 Aligned_cols=67 Identities=15% Similarity=0.194 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 303 dV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
.++.+++.+.+.+..+.+.+--+... -+|++++++-.|.|+-+-.+ +.....+-+.|++.|+|.+.+
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 35556677777787777666444332 26888999889998876322 235678889999999998875
No 369
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=37.19 E-value=1.6e+02 Score=29.78 Aligned_cols=137 Identities=9% Similarity=0.078 Sum_probs=71.4
Q ss_pred hcCCc-EEEEccC-----------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEE-E-------
Q 010610 287 DNKVD-FYAVSFV-----------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGA-M------- 344 (506)
Q Consensus 287 ~~gvD-~IalSfV-----------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGI-m------- 344 (506)
+.++| +|-+.+= ++++.+.++.+.+++. .+.+|++||=--.....+.++++. +|+| +
T Consensus 152 ~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~ 230 (345)
T 3oix_A 152 ASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSI 230 (345)
T ss_dssp HSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCE
T ss_pred ccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeeccc
Confidence 35776 8776643 4555555555555432 357899999643334444455543 3443 1
Q ss_pred -----EcCCCcc----cCC----CCCcHHHHHHHHHHHHHHc--CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCc
Q 010610 345 -----VARGDLG----AEL----PIEEVPLLQEEIIRTCRSM--GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGA 409 (506)
Q Consensus 345 -----IaRGDLg----vel----g~e~V~~~Qk~II~~c~~~--GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~ 409 (506)
|.+.-.. .+. |....+...+.+-+..++. ..|+|....+ -| ..|+..++..|+
T Consensus 231 g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI---------~s---~~da~~~l~aGA 298 (345)
T 3oix_A 231 GNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGV---------XT---GRDAFEHILCGA 298 (345)
T ss_dssp EEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSC---------CS---HHHHHHHHHHTC
T ss_pred ccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCC---------CC---hHHHHHHHHhCC
Confidence 2211110 011 1122344444444444444 5888876432 22 357888999999
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHhcc
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT 441 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~ 441 (506)
|+||+..--..+. | .++.+|.+..+..
T Consensus 299 d~V~igra~~~~g-P----~~~~~i~~~L~~~ 325 (345)
T 3oix_A 299 SMVQIGTALHQEG-P----QIFKRITKELXAI 325 (345)
T ss_dssp SEEEESHHHHHHC-T----HHHHHHHHHHHHH
T ss_pred CEEEEChHHHhcC-h----HHHHHHHHHHHHH
Confidence 9999964311221 2 3455555555544
No 370
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=37.03 E-value=33 Score=33.71 Aligned_cols=52 Identities=31% Similarity=0.493 Sum_probs=33.9
Q ss_pred HHHHHHHHHhCCcEEEEeCCC-----CC----hH-----------HHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 123 REMIWKLAEAGMNVARLNMSH-----GD----HA-----------SHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 123 ~e~i~~li~aGm~v~RiN~SH-----g~----~e-----------~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
.+.++.|-+.|+|++||-++. +. .+ ...+.++.+=+...+.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G---i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG---LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT---CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC---CEEEEecCCC
Confidence 678999999999999999872 21 00 03333444334444555 7788998764
No 371
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=36.94 E-value=2.3e+02 Score=25.33 Aligned_cols=121 Identities=18% Similarity=0.169 Sum_probs=64.1
Q ss_pred cCCcEEEEcc----CCCHHHHHHHHHHHHhcCCCceEE--EecCC-hhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcH
Q 010610 288 NKVDFYAVSF----VKDAQVVHELKNYLKSCGADIHVI--VKIES-ADSIPNLHSIITA-SDGAMVARGDLGAELPIEEV 359 (506)
Q Consensus 288 ~gvD~IalSf----V~saedV~~lr~~l~~~~~~i~II--aKIEt-~~aveNldeIl~~-sDGImIaRGDLgvelg~e~V 359 (506)
.|+|+|=+.+ -...+.++++++. ..+..++ .|+.+ ++- -++..++. +|++.+-.+ ..
T Consensus 24 ~~v~~iev~~~~~~~~g~~~i~~l~~~----~~~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~-------~~-- 88 (207)
T 3ajx_A 24 EYVDIIELGTPLIKAEGLSVITAVKKA----HPDKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGS-------AD-- 88 (207)
T ss_dssp GGCSEEEECHHHHHHHCTHHHHHHHHH----STTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETT-------SC--
T ss_pred ccCCEEEECcHHHHhhCHHHHHHHHHh----CCCCeEEEEEEecCccHH--HHHHHHhCCCCEEEEecc-------CC--
Confidence 3788876643 1223445555443 1234444 58876 322 24555555 899986321 11
Q ss_pred HHHHHHHHHHHHHcCCcEEEEehhhhhhhcCC-CCChhhcccHHHHHHhCccee-Eeecccc--CCCCHHHHHHHHHHHH
Q 010610 360 PLLQEEIIRTCRSMGKAVIVATNMLESMIVHP-TPTRAEVSDIAIAVREGADAV-MLSGETA--HGKFPLKAVKVMHTVS 435 (506)
Q Consensus 360 ~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~-~PtRAEv~Dvanav~dG~D~v-mLs~ETA--~G~yPveaV~~m~~I~ 435 (506)
...-+.+++.|+++|++++++. . ++ .| .| .+..+...|+|.+ +.-+-++ .|..|.+ +.+++++
T Consensus 89 ~~~~~~~~~~~~~~g~~~gv~~------~-s~~~p--~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~--~~i~~~~ 155 (207)
T 3ajx_A 89 DSTIAGAVKAAQAHNKGVVVDL------I-GIEDK--AT--RAQEVRALGAKFVEMHAGLDEQAKPGFDLN--GLLAAGE 155 (207)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEC------T-TCSSH--HH--HHHHHHHTTCSEEEEECCHHHHTSTTCCTH--HHHHHHH
T ss_pred hHHHHHHHHHHHHcCCceEEEE------e-cCCCh--HH--HHHHHHHhCCCEEEEEecccccccCCCchH--HHHHHhh
Confidence 1234577788888999986642 1 11 22 22 1223334589998 6544443 5655554 5555554
Q ss_pred H
Q 010610 436 L 436 (506)
Q Consensus 436 ~ 436 (506)
.
T Consensus 156 ~ 156 (207)
T 3ajx_A 156 K 156 (207)
T ss_dssp H
T ss_pred C
Confidence 4
No 372
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=36.85 E-value=1.4e+02 Score=33.47 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=72.9
Q ss_pred CccCHHHhHhhHhcCCcEEEE-------------------ccCCCH--HHHHHHHHHHHhcCCCceEEEecCChhhhhh-
Q 010610 275 TEKDWDDIKFGVDNKVDFYAV-------------------SFVKDA--QVVHELKNYLKSCGADIHVIVKIESADSIPN- 332 (506)
Q Consensus 275 tekD~~dI~~al~~gvD~Ial-------------------SfV~sa--edV~~lr~~l~~~~~~i~IIaKIEt~~aveN- 332 (506)
++.-++-|.||.++|.++|.+ +|++-- -|+.+|.+|-+++ .+.||.-.|+..++.|
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhhH
Confidence 444578899999999999999 222211 2499999999875 4788999999886554
Q ss_pred ---HHHHHHh-----CCEEEEcC-CCcccCCCC----CcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 333 ---LHSIITA-----SDGAMVAR-GDLGAELPI----EEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 333 ---ldeIl~~-----sDGImIaR-GDLgvelg~----e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+|+.++. ..||-++= ||+ ++-+- ..+.....+|++.|.+++.-|...
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfH 507 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAH 507 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEcc
Confidence 4555554 57888752 221 11111 347778899999999999998876
No 373
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=36.70 E-value=32 Score=35.34 Aligned_cols=46 Identities=15% Similarity=0.261 Sum_probs=36.1
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHH
Q 010610 114 CTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (506)
Q Consensus 114 ~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 159 (506)
+.+|-.....+.++.++++|++++=++.+||..+...+.++.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 3344434567899999999999999999999887766777777764
No 374
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=36.57 E-value=74 Score=31.81 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHhCCcEEEEeCCCCC---h-------HHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 121 NTREMIWKLAEAGMNVARLNMSHGD---H-------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 121 ~~~e~i~~li~aGm~v~RiN~SHg~---~-------e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
...+.++.|-+.|+|++||-++... + +.+.+.++.+=+...+.| +.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G---i~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG---LYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEECCCc
Confidence 3688999999999999999886421 1 122233333333334444 7889998754
No 375
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=36.08 E-value=93 Score=30.20 Aligned_cols=125 Identities=16% Similarity=0.178 Sum_probs=65.8
Q ss_pred CCCCCCc-cCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhh-hHHHHHHh--------
Q 010610 270 TLPSITE-KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIP-NLHSIITA-------- 339 (506)
Q Consensus 270 ~lp~lte-kD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~ave-NldeIl~~-------- 339 (506)
.+|.+|+ .|...+++..+. +|++.++= ++.++...+++ +.+ ...+|+.| .|.. ++++++.+
T Consensus 87 Gl~~~te~~d~~~~~~l~~~-vd~~kIga-~~~~n~~ll~~-~a~--~~kPV~lk----~G~~~t~~e~~~Av~~i~~~G 157 (262)
T 1zco_A 87 GLVTVTEVMDTRHVELVAKY-SDILQIGA-RNSQNFELLKE-VGK--VENPVLLK----RGMGNTIQELLYSAEYIMAQG 157 (262)
T ss_dssp TCEEEEECCCGGGHHHHHHH-CSEEEECG-GGTTCHHHHHH-HTT--SSSCEEEE----CCTTCCHHHHHHHHHHHHTTT
T ss_pred CCcEEEeeCCHHhHHHHHhh-CCEEEECc-ccccCHHHHHH-HHh--cCCcEEEe----cCCCCCHHHHHHHHHHHHHCC
Confidence 4444443 477778888888 99988773 33333333333 222 23455554 2343 44555443
Q ss_pred -CCEEEEcCCCccc-CCCCCcHH-HHHHHHHHHHHHcCCcE-EEEehhhhhhhcCCCCChhhcccHH-HHHHhCcceeEe
Q 010610 340 -SDGAMVARGDLGA-ELPIEEVP-LLQEEIIRTCRSMGKAV-IVATNMLESMIVHPTPTRAEVSDIA-IAVREGADAVML 414 (506)
Q Consensus 340 -sDGImIaRGDLgv-elg~e~V~-~~Qk~II~~c~~~GkPv-ivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~D~vmL 414 (506)
-+.+++=||--.. .++.+.+. .+... ..+..|.|| +.+++- ...|.-+..++ .++..|+|++|+
T Consensus 158 n~~i~L~~RG~~~~~~y~~~~v~L~ai~~---lk~~~~~pVi~d~sH~--------~g~~~~v~~~~~aAva~Ga~Gl~i 226 (262)
T 1zco_A 158 NENVILCERGIRTFETATRFTLDISAVPV---VKELSHLPIIVDPSHP--------AGRRSLVIPLAKAAYAIGADGIMV 226 (262)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCCTTHHHH---HHHHBSSCEEECSSTT--------TCSGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCeEEEEECCCCCCCCcChhhcCHHHHHH---HHhhhCCCEEEEcCCC--------CCccchHHHHHHHHHHcCCCEEEE
Confidence 2788888983222 34555333 11111 222458998 555542 11122111222 288899999998
No 376
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=36.06 E-value=1.4e+02 Score=30.07 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=54.3
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH-HHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~ 409 (506)
+-.++. +|||++. |-- +..+..++-..+.+.+++.++ -..|||.-| ...+-.|.-+.+ .|-..|+
T Consensus 59 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Ga 127 (343)
T 2v9d_A 59 DDLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGT---------GGTNARETIELSQHAQQAGA 127 (343)
T ss_dssp HHHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCC
Confidence 333444 7999885 211 122333344444444444443 247888765 233445544444 4666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..++
T Consensus 128 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 128 DGIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp SEEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987443333345677888888876654
No 377
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=36.06 E-value=73 Score=25.88 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=31.5
Q ss_pred ecCCCeeEEeccCCCeEecCCCEEEEEEecCCCCceEEEeccchhh--hhcCCCCEEEEeC-CeEEEEE
Q 010610 173 DTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFV--NDVEVGDMLLVDG-GMMSLLV 238 (506)
Q Consensus 173 DL~GPkIRtG~l~~~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l~--~~v~~Gd~IliDD-G~i~l~V 238 (506)
+|++|-..+|.+- ++-..+.+.+... +...+.|+...++ +.++||++|.++. ....+.+
T Consensus 13 ~L~~~P~~vG~v~---e~~dd~~~iVkss----~g~~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~v 74 (85)
T 3h43_A 13 RMRVPPLIVGTVV---DKVGERKVVVKSS----TGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDV 74 (85)
T ss_dssp HHHSCCEEEEEEE---EEEETTEEEEEET----TSSEEEEEBCTTSCGGGCCTTCEEEECTTTCCEEEE
T ss_pred HhcCCCceEEEEE---EEcCCCEEEEEeC----CCCeEEEEecCccCHHHCCCCCEEEECCcccCHhhh
Confidence 3555556666652 2222333333221 1234555555543 5889999999996 4444443
No 378
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=35.96 E-value=1.2e+02 Score=29.46 Aligned_cols=95 Identities=12% Similarity=0.047 Sum_probs=53.1
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++ -..|||..+ ...+-.|.-+.+. |-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGv---------g~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAGT---------GANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCccHHHHHHHHHHHHhcCC
Confidence 334444 8999985 211 122333344444444444433 247888765 2334455444444 556799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987443333345667788888876553
No 379
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.90 E-value=1.9e+02 Score=28.44 Aligned_cols=95 Identities=14% Similarity=0.120 Sum_probs=53.5
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccH-HHHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDI-AIAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dv-anav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++ -..|||.-+ ...+-.|.-+. -.|-..|+
T Consensus 44 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 44 AYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGV---------GTNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp HHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecC---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 7999985 221 122333343344444444432 247888765 23344454444 44667799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 113 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 113 DGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987443333335677888888887664
No 380
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=35.86 E-value=1.7e+02 Score=29.76 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=23.1
Q ss_pred CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 374 GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
..|||....+- --.|+..++..|+|++|+.
T Consensus 272 ~ipVia~GGI~------------~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 272 KIEVYMDGGVR------------TGTDVLKALALGARCIFLG 301 (352)
T ss_dssp SSEEEEESSCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 58888765332 2358999999999999985
No 381
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=35.75 E-value=54 Score=31.47 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhCCcEEEEeCCCC---------Ch-HHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 122 TREMIWKLAEAGMNVARLNMSHG---------DH-ASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SHg---------~~-e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
+.+.++.|.+.|+|++|+-++.. .. +...+.++.+=+...+.| +.+++|+-.
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G---i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG---LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC---CEEEEEecC
Confidence 57889999999999999987621 10 222223333333344555 678888854
No 382
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=35.58 E-value=30 Score=30.78 Aligned_cols=58 Identities=22% Similarity=0.359 Sum_probs=41.4
Q ss_pred EecCCCEEEEEEec--CCC---CceEEEeccchhhh---hcCCCCEEEEeCCeEEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN---DVEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~---~v~~Gd~IliDDG~i~l~V~~~~~~~v~~ 248 (506)
-++.|++.+|+... ..| .+....++...|.. .+++|+.+.+.+ +...|++++++.+..
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~v 129 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVTL 129 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEEE
Confidence 46889999988763 222 23344556666754 488999999888 777899999987653
No 383
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=35.55 E-value=2.3e+02 Score=24.98 Aligned_cols=128 Identities=10% Similarity=0.091 Sum_probs=67.7
Q ss_pred HHHhHhhHhcCCcEEEEcc--CCCHHHHHHHHHHHHhcCCCceEEEecCC-------------------hhhhhhHHHHH
Q 010610 279 WDDIKFGVDNKVDFYAVSF--VKDAQVVHELKNYLKSCGADIHVIVKIES-------------------ADSIPNLHSII 337 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSf--V~saedV~~lr~~l~~~~~~i~IIaKIEt-------------------~~aveNldeIl 337 (506)
.+++..+++.|+|.+...- ++..+-+..+.+.+. .+.. +..++. ....+-+..+.
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~---~~~~-~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~ 140 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFG---SQAV-VVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 140 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHT---GGGE-EEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhC---CCce-EEEeeecccCCcEEEEEeCCccccccCHHHHHHHHh
Confidence 6677888999999876643 455555666666553 2211 111111 12233344444
Q ss_pred Hh-CCEEE-EcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 338 TA-SDGAM-VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 338 ~~-sDGIm-IaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
.. +..++ .+.+.-|.--|+. -+.|-+.+.....|+|..+- -+...|...+...|+|+++..
T Consensus 141 ~~~~~~vli~~~~~~g~~~g~~-----~~~i~~~~~~~~~Pvia~~g------------~~~~~~~~~~~~~G~~~~~vg 203 (237)
T 3cwo_X 141 KRGAGEILLTSIDRDGTKSGYD-----TEMIRFVRPLTTLPIIASGG------------AGKMEHFLEAFLAGADAALAA 203 (237)
T ss_dssp HHTCSEEEEEETTTTTCCSCCC-----HHHHHHHGGGCCSCEEEESC------------CCSHHHHHHHHHHTCSEEEES
T ss_pred hcCCCeEEEEecCCCCcccccc-----HHHHHHHHHhcCCCEEecCC------------CCCHHHHHHHHHcCcHHHhhh
Confidence 44 33244 4443334333332 22333344556899997652 222345667777899999875
Q ss_pred ccccCCCCHHHH
Q 010610 416 GETAHGKFPLKA 427 (506)
Q Consensus 416 ~ETA~G~yPvea 427 (506)
.--..|.+..+.
T Consensus 204 ~a~~~~~~~~~~ 215 (237)
T 3cwo_X 204 SVFHFREIDVRE 215 (237)
T ss_dssp HHHHTTSSCHHH
T ss_pred HHHHcCCCCHHH
Confidence 433345554433
No 384
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=35.53 E-value=68 Score=31.64 Aligned_cols=52 Identities=31% Similarity=0.402 Sum_probs=35.6
Q ss_pred HHHHHHHHhCCcEEEEeC-CC--C-----ChHHHHHHHHHHHHHHHhcCCceEEEEeecCCCee
Q 010610 124 EMIWKLAEAGMNVARLNM-SH--G-----DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEV 179 (506)
Q Consensus 124 e~i~~li~aGm~v~RiN~-SH--g-----~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GPkI 179 (506)
+..++|++.|.++.=+|. |- | ..|++.+++..|+...+. + +.|.+|+.-|++
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~---~piSIDT~~~~v 92 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-G---ITVSIDTMRADV 92 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-T---CCEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-C---CEEEEeCCCHHH
Confidence 456779999999999997 42 1 257888888888887654 4 567889877653
No 385
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=35.50 E-value=47 Score=32.42 Aligned_cols=51 Identities=27% Similarity=0.384 Sum_probs=32.2
Q ss_pred CHHHHHHHHHhCCcEEEEeCCC---------CCh-HHHHHHHHHHHHHHHhcCCceEEEEeecC
Q 010610 122 TREMIWKLAEAGMNVARLNMSH---------GDH-ASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SH---------g~~-e~~~~~i~~ir~~~~~~~~~~i~Il~DL~ 175 (506)
+.+.++.|-+.|+|++||-++. |.. +...+.++.+=+...+.| +.+++|+-
T Consensus 30 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G---i~vildlh 90 (343)
T 1ceo_A 30 TEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN---LGLVLDMH 90 (343)
T ss_dssp CHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 5788999999999999998652 111 222333333334444555 67788864
No 386
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=35.50 E-value=1.1e+02 Score=24.04 Aligned_cols=69 Identities=10% Similarity=0.087 Sum_probs=37.5
Q ss_pred CCCeEecCCCEEEEEEec-CCCCceEEEe-ccchhhhhcCCCCEEEEeCCeEEEEEEEEe---CCeEEEEEeeC
Q 010610 185 PQPITLTSGQEFTFTIQR-GVGSAECVSV-NYDDFVNDVEVGDMLLVDGGMMSLLVKSKT---EDSVKCEVVDG 253 (506)
Q Consensus 185 ~~~i~Lk~G~~v~lt~~~-~~~~~~~i~v-~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~---~~~v~~~V~~g 253 (506)
+..+.+.+|+.++|...- +.......|. +-..+...-..--.+.-+++.-.|.+..+. .+...|.+.|.
T Consensus 12 p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 85 (100)
T 3knb_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEEC
Confidence 356889999999998752 1112222332 222221110000134445666778776653 45689999875
No 387
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=35.49 E-value=1.6e+02 Score=28.72 Aligned_cols=96 Identities=17% Similarity=0.035 Sum_probs=55.5
Q ss_pred HHHHHH-h-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHh
Q 010610 333 LHSIIT-A-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVRE 407 (506)
Q Consensus 333 ldeIl~-~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~d 407 (506)
++-.++ . +||+++. |-- +..+..++-..+.+..++.++ -..|||..| ...+-.|.-+ .-.|-..
T Consensus 30 v~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQV---------GSVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEC---------CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEec---------CCCCHHHHHHHHHHHHhc
Confidence 344555 3 7999985 221 122333344444444444443 247888765 2323345444 4446667
Q ss_pred CcceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 408 GADAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 408 G~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|+|++|+..=--...-+-+.++....|+..+.
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 99 GYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99999987443333446778888889987775
No 388
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.44 E-value=1.7e+02 Score=29.15 Aligned_cols=95 Identities=20% Similarity=0.103 Sum_probs=54.1
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH-HHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~ 409 (506)
+-.++. +|||++. |-- +..+..++-..+.+..++.++ -..|||.-|- ..+-.|.-+.+ .|-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---------~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIG---------ALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 333444 8999985 221 122333344444444444433 2478887652 33344544444 4666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986443333345677888888987764
No 389
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=35.20 E-value=68 Score=32.80 Aligned_cols=124 Identities=14% Similarity=0.135 Sum_probs=0.0
Q ss_pred CCCCc-cCHHHhHhhHh-cCCcEEEEccCC----------------CHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhh
Q 010610 272 PSITE-KDWDDIKFGVD-NKVDFYAVSFVK----------------DAQVVHELKNYLKSCGADIHVIVK-IESADSIPN 332 (506)
Q Consensus 272 p~lte-kD~~dI~~al~-~gvD~IalSfV~----------------saedV~~lr~~l~~~~~~i~IIaK-IEt~~aveN 332 (506)
+.+.. ++.+.++.+++ .++|.+.+-..- ..+.++++++.+ .++|++| +=.--..+.
T Consensus 129 ~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~-----~vPVivK~vG~g~s~~~ 203 (368)
T 3vkj_A 129 PQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL-----SVPIIVKESGNGISMET 203 (368)
T ss_dssp GGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC-----SSCEEEECSSSCCCHHH
T ss_pred eecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc-----CCCEEEEeCCCCCCHHH
Q ss_pred HHHHHHh-CCEEEE----c---------C-----------CCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhh
Q 010610 333 LHSIITA-SDGAMV----A---------R-----------GDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESM 387 (506)
Q Consensus 333 ldeIl~~-sDGImI----a---------R-----------GDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSM 387 (506)
.....+. +|+|.| | | +..-.+++.+-...+. ++.+.+. ..|+|...
T Consensus 204 A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~-~v~~~~~--~ipvia~G------ 274 (368)
T 3vkj_A 204 AKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIM-EVRYSVP--DSFLVGSG------ 274 (368)
T ss_dssp HHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHH-HHHHHST--TCEEEEES------
T ss_pred HHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHH-HHHHHcC--CCcEEEEC------
Q ss_pred hcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 388 IVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 388 i~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
--.--.|++.++..|+|++|+.
T Consensus 275 ------GI~~~~d~~kal~lGA~~v~ig 296 (368)
T 3vkj_A 275 ------GIRSGLDAAKAIALGADIAGMA 296 (368)
T ss_dssp ------SCCSHHHHHHHHHHTCSEEEEC
T ss_pred ------CCCCHHHHHHHHHcCCCEEEEc
No 390
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=35.15 E-value=90 Score=29.66 Aligned_cols=62 Identities=16% Similarity=0.220 Sum_probs=38.3
Q ss_pred hcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCC------cccCCCC-------CcHHHHHHHHHHHHHHcCCcEEE
Q 010610 313 SCGADIHVIVKIESADSIPNLHSIITASDGAMVARGD------LGAELPI-------EEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 313 ~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGD------Lgvelg~-------e~V~~~Qk~II~~c~~~GkPviv 379 (506)
++|..+.++.-.++. + ++++++..||+++.-|. ++-+ +. ..-......+++.+.+.++|++=
T Consensus 39 ~aG~~pv~lp~~~~~---~-~~~~l~~~DGlil~GG~~v~P~~yg~~-~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLG 113 (254)
T 3fij_A 39 KVGGFPIALPIDDPS---T-AVQAISLVDGLLLTGGQDITPQLYLEE-PSQEIGAYFPPRDSYEIALVRAALDAGKPIFA 113 (254)
T ss_dssp HHTCEEEEECCCCGG---G-HHHHHHTCSEEEECCCSCCCGGGGTCC-CCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HCCCEEEEEeCCCch---H-HHHHHhhCCEEEECCCCCCChhhcCCc-cCcccCCcChhhhHHHHHHHHHHHHcCCCEEE
Confidence 345555444433322 2 67778889999999872 1111 11 12234567889999999999863
No 391
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=35.11 E-value=1.3e+02 Score=30.15 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 303 dV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
-+..+.+.+.+.|..+.+-+--+.... +.++++.-.|.|+.+-.+ ...+..|-+.|+++++|+|.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 455677788888888887776555443 567888888988876322 456778999999999999875
No 392
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.06 E-value=1.9e+02 Score=28.14 Aligned_cols=95 Identities=19% Similarity=0.183 Sum_probs=53.4
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH-HHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++. ..||+.-+ ...+-.|.-+.+ .|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 7999985 211 1223333333333444444332 47888765 233344544444 4666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987443333345677888888887664
No 393
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=35.03 E-value=1.6e+02 Score=28.83 Aligned_cols=94 Identities=20% Similarity=0.207 Sum_probs=53.2
Q ss_pred HHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccH-HHHHHhCcc
Q 010610 335 SIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDI-AIAVREGAD 410 (506)
Q Consensus 335 eIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dv-anav~dG~D 410 (506)
-.++. +||+++. |-- +..+..++-..+.+..++.++ -..|||.-+- ..+-.|.-+. -.|-..|+|
T Consensus 41 ~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 41 YLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTG---------SNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCC---------CCCHHHHHHHHHHHHhcCCC
Confidence 33344 7999985 211 122333343344444444433 2478887652 3333454444 446677999
Q ss_pred eeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 411 AVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 411 ~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
++|+..=--...-+-+.++....|+..+.
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 110 AVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99987544334445677888888876654
No 394
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=34.94 E-value=2.5e+02 Score=28.02 Aligned_cols=111 Identities=15% Similarity=0.183 Sum_probs=66.5
Q ss_pred hHhhHhcCCcEEEEcc---------------CCCHHHHHHHHHHHHhcCCCceEEEecCCh------hhhhhHHHHHHh-
Q 010610 282 IKFGVDNKVDFYAVSF---------------VKDAQVVHELKNYLKSCGADIHVIVKIESA------DSIPNLHSIITA- 339 (506)
Q Consensus 282 I~~al~~gvD~IalSf---------------V~saedV~~lr~~l~~~~~~i~IIaKIEt~------~aveNldeIl~~- 339 (506)
++...+.|+++|-+== +...+-+..++..... +.+..|+++.|.. ++++......++
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAG 188 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAG 188 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcC
Confidence 4455667888774421 1122456666665544 7789999999987 556666666655
Q ss_pred CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe
Q 010610 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414 (506)
Q Consensus 340 sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL 414 (506)
+|+||+- .. .. -..+-+-|++..+|++. +|++- -..|.++. ...-..|+.-+..
T Consensus 189 AD~i~~e-------~~-~~----~~~~~~i~~~~~~P~~~--n~~~~-g~tp~~~~------~eL~~lGv~~v~~ 242 (305)
T 3ih1_A 189 ADAIFPE-------AL-QS----EEEFRLFNSKVNAPLLA--NMTEF-GKTPYYSA------EEFANMGFQMVIY 242 (305)
T ss_dssp CSEEEET-------TC-CS----HHHHHHHHHHSCSCBEE--ECCTT-SSSCCCCH------HHHHHTTCSEEEE
T ss_pred CCEEEEc-------CC-CC----HHHHHHHHHHcCCCEEE--eecCC-CCCCCCCH------HHHHHcCCCEEEE
Confidence 8999983 22 22 23455567777899863 34332 11234444 3455568887765
No 395
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=34.92 E-value=2.7e+02 Score=25.48 Aligned_cols=66 Identities=9% Similarity=0.187 Sum_probs=30.8
Q ss_pred HHHHHHHHhcCCCceEEEecCChh-hhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 305 HELKNYLKSCGADIHVIVKIESAD-SIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 305 ~~lr~~l~~~~~~i~IIaKIEt~~-aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
..+.+.+.+.|.++.+..-=.+.+ -.+.++.++.. .|||++.+.|- ......++.+.+.|+|+++.
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----------~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 25 QAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNL----------DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh----------hhhHHHHHHHHHCCCcEEEe
Confidence 334445555554443332111111 12334444433 67777754331 12334566667777777654
No 396
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=34.89 E-value=45 Score=32.20 Aligned_cols=48 Identities=13% Similarity=0.169 Sum_probs=35.4
Q ss_pred hhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEeh
Q 010610 330 IPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATN 382 (506)
Q Consensus 330 veNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATq 382 (506)
++.+.++++.+|.+.|+.|= +-++.......+++.+++.++|+++=.-
T Consensus 47 ~~e~~~~~~~~dalvi~~G~-----~~~~~~~~~~~~~~~a~~~~~pvVlDpv 94 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGT-----LDSGWRRSMVKATEIANELGKPIVLDPV 94 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTT-----CCHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHHHHCCEEEEEECC-----CCHHHHHHHHHHHHHHHHcCCcEEEcCc
Confidence 55677888889999998663 3334445667788889999999987543
No 397
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=34.85 E-value=44 Score=33.30 Aligned_cols=63 Identities=16% Similarity=0.201 Sum_probs=51.9
Q ss_pred cCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA 339 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~ 339 (506)
.|.+.|+.=++.|+||+.--++=+++.+....+.++..|-+++|++-|==.....++.-+.+.
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~ 223 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTEV 223 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHHc
Confidence 567778888999999999999999999999999999888888998876655556666666443
No 398
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=34.83 E-value=86 Score=29.57 Aligned_cols=101 Identities=19% Similarity=0.220 Sum_probs=57.4
Q ss_pred cCHHHh-HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCC-------hhhhhhHHHHHHhCCEEEEcCC
Q 010610 277 KDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIES-------ADSIPNLHSIITASDGAMVARG 348 (506)
Q Consensus 277 kD~~dI-~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt-------~~aveNldeIl~~sDGImIaRG 348 (506)
.|.+++ +.+-++|++.++++-. +.++...+.++.++.. ++....-+=- .++++.|++.+. +.-.+|-|
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~--~~~~~~iG 102 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLEKFAK--DEKVVAIG 102 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHHHHTT--STTEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEeeccccccccCHHHHHHHHHHhc--cCCEEEEE
Confidence 355554 4556789998776543 6777777777765433 3333332211 133444444442 11233445
Q ss_pred CcccCCCCC-cHHHHH----HHHHHHHHHcCCcEEEEe
Q 010610 349 DLGAELPIE-EVPLLQ----EEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 349 DLgvelg~e-~V~~~Q----k~II~~c~~~GkPvivAT 381 (506)
..|++.... .-...| ..+++.|.+.|+||++.+
T Consensus 103 e~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~ 140 (268)
T 1j6o_A 103 ETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHI 140 (268)
T ss_dssp EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 566665431 112445 467788999999999987
No 399
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.81 E-value=1.9e+02 Score=28.05 Aligned_cols=89 Identities=21% Similarity=0.255 Sum_probs=52.7
Q ss_pred CCEEEEcCCCcc--cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHhCcceeEeec
Q 010610 340 SDGAMVARGDLG--AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGADAVMLSG 416 (506)
Q Consensus 340 sDGImIaRGDLg--velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~dG~D~vmLs~ 416 (506)
+||+++. |--| ..+..++-..+.+..++.++. ..|||.-+- ..+-.|.-+ .-.+-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGTG---------ANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeCC---------CCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7999885 2211 233334444444444444432 378887652 333445444 4456778999999864
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE 439 (506)
=--...-+-+.++....|+..+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 43333345678888999988774
No 400
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=34.76 E-value=2e+02 Score=27.97 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=54.7
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDLG--AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDLg--velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~dG~ 409 (506)
+-.++. +||+++. |--| ..+..++-..+.+..++.++ -..|||.-+ ...+-.|.-+ ...|-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGT---------GTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CcccHHHHHHHHHHHHHcCC
Confidence 333443 7999985 2111 12222333333444444442 346888765 2333445444 444666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVK 128 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999997443344445778899999988875
No 401
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=34.75 E-value=1.3e+02 Score=25.29 Aligned_cols=60 Identities=10% Similarity=0.173 Sum_probs=32.4
Q ss_pred ecCCCeeEEeccCCCeEecCCCEEEEEEecCCCCceEEEeccchh--hhhcCCCCEEEEeC-CeEEEEEE
Q 010610 173 DTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDF--VNDVEVGDMLLVDG-GMMSLLVK 239 (506)
Q Consensus 173 DL~GPkIRtG~l~~~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l--~~~v~~Gd~IliDD-G~i~l~V~ 239 (506)
.|++|-.-+|.+ +++-..+++.+... +...+.|+...+ .+.++||++|.++. ......+.
T Consensus 32 ~L~~~P~~Vg~v---~e~~d~~~~iVk~s----~g~~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~iL 94 (109)
T 2wg5_A 32 RLRSPPLLVGVV---SDILEDGRVVVKSS----TGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVL 94 (109)
T ss_dssp HHHSCCEEEEEE---EEECTTSCEEEEET----TSCEEEECBCTTSCTTTCCTTCEEEEETTTCCEEEEE
T ss_pred HHhCCCceEEEE---EEEecCCEEEEEeC----CCCEEEEEcccccCHHHCCCCCEEEECCcceEeEEeC
Confidence 455666666665 22223333433321 112345554433 36799999999997 55444443
No 402
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.63 E-value=1.8e+02 Score=27.78 Aligned_cols=102 Identities=8% Similarity=-0.056 Sum_probs=64.2
Q ss_pred HHhHhhHhcCCcEEEEccC----CCHHHHHHHHHHHHhcCCCceEE-Eec-----CC--------------hhhhhhHHH
Q 010610 280 DDIKFGVDNKVDFYAVSFV----KDAQVVHELKNYLKSCGADIHVI-VKI-----ES--------------ADSIPNLHS 335 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV----~saedV~~lr~~l~~~~~~i~II-aKI-----Et--------------~~aveNlde 335 (506)
+.++.+.+.|.|+|=+..- ....++.++++.+++.|-.+..+ +-. -+ .+.++.++.
T Consensus 33 ~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 112 (303)
T 3l23_A 33 ANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKA 112 (303)
T ss_dssp HHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHH
Confidence 4567888999999988752 13346889999998887654322 222 11 345677777
Q ss_pred HHHh-----CCEEEEcCCCcc-cCCCCCcHHHHHHHHHHHHHHcCCc--EEEEe
Q 010610 336 IITA-----SDGAMVARGDLG-AELPIEEVPLLQEEIIRTCRSMGKA--VIVAT 381 (506)
Q Consensus 336 Il~~-----sDGImIaRGDLg-velg~e~V~~~Qk~II~~c~~~GkP--vivAT 381 (506)
.++. ++.|.+..+.-. .+-.++.+...-+++.+.|.++|.. +.+-+
T Consensus 113 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En 166 (303)
T 3l23_A 113 TAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHN 166 (303)
T ss_dssp HHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEcc
Confidence 7665 567777522110 0001224555667888999999999 77643
No 403
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=34.57 E-value=52 Score=33.92 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcc--cCCCCCcHHHHHHHHHHHHHHcCCc
Q 010610 300 DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLG--AELPIEEVPLLQEEIIRTCRSMGKA 376 (506)
Q Consensus 300 saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLg--velg~e~V~~~Qk~II~~c~~~GkP 376 (506)
+.++++++++.. +.+|+.|.= ...+......+. +|+|.|.- --| ...+...+ ....++.++.. -..|
T Consensus 240 ~~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~-~ggr~~~~g~~~~-~~l~~v~~av~-~~ip 309 (392)
T 2nzl_A 240 SWEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSN-HGARQLDGVPATI-DVLPEIVEAVE-GKVE 309 (392)
T ss_dssp CHHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECC-GGGTSSTTCCCHH-HHHHHHHHHHT-TSSE
T ss_pred HHHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCC-CCCCcCCCCcChH-HHHHHHHHHcC-CCCE
Confidence 345566665532 456777721 123333333333 79999841 111 12222222 12222222221 2488
Q ss_pred EEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 377 vivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
||....+- --.|+..++..|+|+||+..
T Consensus 310 Via~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 310 VFLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EEEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 88765322 24589999999999999863
No 404
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=34.54 E-value=43 Score=34.34 Aligned_cols=55 Identities=18% Similarity=0.162 Sum_probs=33.8
Q ss_pred CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeecccc-----CCCCHHHHHHHHHHHHHHHhccc
Q 010610 374 GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETA-----HGKFPLKAVKVMHTVSLRTEATI 442 (506)
Q Consensus 374 GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA-----~G~yPveaV~~m~~I~~~aE~~~ 442 (506)
..|+|....+- --.|++.++..|+|++++..--- .| +....+.+..+.++.+..+
T Consensus 278 ~ipvia~GGI~------------~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G--~~~v~~~l~~l~~eL~~~m 337 (365)
T 3sr7_A 278 KVEILASGGIR------------HPLDIIKALVLGAKAVGLSRTMLELVEQHS--VHEVIAIVNGWKEDLRLIM 337 (365)
T ss_dssp TSEEEECSSCC------------SHHHHHHHHHHTCSEEEESHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCC------------CHHHHHHHHHcCCCEEEECHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHH
Confidence 56877664322 23589999999999999864211 12 2223456666666666543
No 405
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=34.19 E-value=56 Score=32.80 Aligned_cols=62 Identities=8% Similarity=0.085 Sum_probs=41.2
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 109 KTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
+....+|.|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.+|++. | ..+.|++|.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G-~d~~l~vDa 198 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---G-DSFPLMVDA 198 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---C-TTSCEEEEC
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---C-CCCeEEEEC
Confidence 3445566553222443 445678899999999999998877777777777653 3 334456664
No 406
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=34.10 E-value=1.2e+02 Score=29.89 Aligned_cols=68 Identities=13% Similarity=0.208 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHH-----------hCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHH
Q 010610 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-----------ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCR 371 (506)
Q Consensus 303 dV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~-----------~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~ 371 (506)
.+..+++.+.+.|.++.|.+--+.....+|+++++. -.|.|+-+- +=+.....|-+.|.
T Consensus 90 Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c~ 159 (292)
T 3h8v_A 90 KVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTACN 159 (292)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHHH
Confidence 345667778888999888887777766778888763 357666442 22345677889999
Q ss_pred HcCCcEEEE
Q 010610 372 SMGKAVIVA 380 (506)
Q Consensus 372 ~~GkPvivA 380 (506)
++|+|.+.+
T Consensus 160 ~~~~Pli~~ 168 (292)
T 3h8v_A 160 ELGQTWMES 168 (292)
T ss_dssp HHTCCEEEE
T ss_pred HhCCCEEEe
Confidence 999998754
No 407
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=34.09 E-value=1.4e+02 Score=27.71 Aligned_cols=66 Identities=17% Similarity=0.245 Sum_probs=38.1
Q ss_pred HHHHHHHHhcCCCceEEEecCChh-hhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 305 HELKNYLKSCGADIHVIVKIESAD-SIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 305 ~~lr~~l~~~~~~i~IIaKIEt~~-aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
..+.+.+.+.|.++.++.- .+.+ -.+.++.+++. .|||++.+.|.. .....++.++++|+||++..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~----------~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 22 KFADKAGKDLGFEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPK----------LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHTEEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGG----------GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHcCCEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCch----------hhHHHHHHHHHCCCcEEEeC
Confidence 3344555555655544332 2222 23445555544 899999764431 23445667888999998754
No 408
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=34.06 E-value=52 Score=33.14 Aligned_cols=66 Identities=12% Similarity=0.112 Sum_probs=37.8
Q ss_pred HhHhhHhcCCcEEEEccCCC-----H--------HHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHhCCEEEE
Q 010610 281 DIKFGVDNKVDFYAVSFVKD-----A--------QVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDGAMV 345 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~s-----a--------edV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~sDGImI 345 (506)
.++.+.+.|+|+|.++--.. . .+...++++-+. -.+++||+ -|-|++-++ ++++-+|+|||
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~~~iPVianGgI~s~eda~---~~l~GaD~V~i 224 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-FPQLTFVTNGGIRSLEEAL---FHLKRVDGVML 224 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-CTTSEEEEESSCCSHHHHH---HHHTTSSEEEE
T ss_pred HHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-CCCCeEEEECCcCCHHHHH---HHHhCCCEEEE
Confidence 34566789999999874211 0 123233332222 12577777 466655443 33445999999
Q ss_pred cCCCc
Q 010610 346 ARGDL 350 (506)
Q Consensus 346 aRGDL 350 (506)
||+=|
T Consensus 225 GRa~l 229 (350)
T 3b0p_A 225 GRAVY 229 (350)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 99744
No 409
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=34.04 E-value=1.1e+02 Score=30.51 Aligned_cols=119 Identities=17% Similarity=0.248 Sum_probs=72.0
Q ss_pred HHHhHhhHhcCCcEEEEccCCCH--HHHHHHHHHHHhcCCCceEEE-e-c-CChhhhhhHHHHHHh-CCEEEEcCCCccc
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDA--QVVHELKNYLKSCGADIHVIV-K-I-ESADSIPNLHSIITA-SDGAMVARGDLGA 352 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~sa--edV~~lr~~l~~~~~~i~IIa-K-I-Et~~aveNldeIl~~-sDGImIaRGDLgv 352 (506)
.+||+.+.+.|+|+|.+-+...- -|+..++++++.++. ..+.- . + +..+..+.++.++.. .|.|+-+-+.-++
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a 192 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA 192 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh
Confidence 35788899999999999985543 678888888876554 22211 1 0 112345667777774 8999987664443
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH-hCcceeEeec
Q 010610 353 ELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR-EGADAVMLSG 416 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~-dG~D~vmLs~ 416 (506)
.+.++.+.+. ++. ..|+..|++.-=+ .+.- +...+. -|++.+-+|+
T Consensus 193 ---~~Gl~~Lk~L-v~~--a~~rI~ImaGGGV-------~~~N-----i~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 193 ---LEGLPLIKRL-IEQ--AKGRIVVMPGGGI-------TDRN-----LQRILEGSGATEFHCSA 239 (287)
T ss_dssp ---TTTHHHHHHH-HHH--HTTSSEEEECTTC-------CTTT-----HHHHHHHHCCSEEEECC
T ss_pred ---HHhHHHHHHH-HHH--hCCCCEEEECCCc-------CHHH-----HHHHHHhhCCCEEeECc
Confidence 3445544443 332 2344556553211 2222 344444 7999999985
No 410
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=33.90 E-value=2.9e+02 Score=25.73 Aligned_cols=51 Identities=18% Similarity=0.389 Sum_probs=39.1
Q ss_pred HHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHH
Q 010610 363 QEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 433 (506)
Q Consensus 363 Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~ 433 (506)
-...++.|+++|++|.+.| ++ +-.+...++..|+|+|+- +||..+.+.+.+
T Consensus 185 ~~~~v~~~~~~G~~v~~WT------Vn-------~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 185 HPDWVKDCKVLGMTSNVWT------VD-------DPKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp STTHHHHHHHTTCEEEEEC------CC-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEC------CC-------CHHHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 3578999999999999997 11 223566788899999876 589888877653
No 411
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=33.88 E-value=66 Score=32.20 Aligned_cols=46 Identities=11% Similarity=0.102 Sum_probs=34.0
Q ss_pred HHHHHHH-hCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 125 MIWKLAE-AGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 125 ~i~~li~-aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
..+++++ +|.+.+.|++.|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDa 195 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---G-DRASVRVDV 195 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---G-GGCEEEEEC
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---C-CCCEEEEEC
Confidence 3456777 99999999999998877777777777653 3 334566664
No 412
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=33.81 E-value=90 Score=31.00 Aligned_cols=63 Identities=10% Similarity=0.156 Sum_probs=46.3
Q ss_pred HhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec-C-ChhhhhhHHHHHHh-CCEEEEcCC
Q 010610 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-E-SADSIPNLHSIITA-SDGAMVARG 348 (506)
Q Consensus 281 dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI-E-t~~aveNldeIl~~-sDGImIaRG 348 (506)
+.+...+.|+|.|++.-+.+.++++++.+.+ ++++++.+ | .....-+.+++-+. .+.|++++.
T Consensus 172 ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~ 237 (295)
T 1xg4_A 172 RAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANITEFGATPLFTTDELRSAHVAMALYPLS 237 (295)
T ss_dssp HHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSH
T ss_pred HHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChH
Confidence 3345568999999999999899999988877 35676644 4 13345677888877 788888643
No 413
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=33.78 E-value=39 Score=33.73 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=47.3
Q ss_pred cCHHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHH
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI 336 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeI 336 (506)
.|.+.++.-++.|+||+.--++=+++.+....+.+++.|-+++|++-|==.....++.-+
T Consensus 164 ~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 164 ADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 467777888899999999999999999999999998888888888755444444444444
No 414
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=33.75 E-value=2.5e+02 Score=27.49 Aligned_cols=106 Identities=10% Similarity=0.141 Sum_probs=63.9
Q ss_pred HHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehh
Q 010610 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNM 383 (506)
Q Consensus 304 V~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqm 383 (506)
++.++++..+. .+.+++-+=++..++-+.+. +|.+-||-+++ ...+ +++++...||||++.|.|
T Consensus 75 l~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~G~ 138 (280)
T 2qkf_A 75 LKIFEKVKAEF--GIPVITDVHEPHQCQPVAEV---CDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKKPQ 138 (280)
T ss_dssp HHHHHHHHHHH--CCCEEEECCSGGGHHHHHHH---CSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHhh---CCEEEECcccc------cCHH-----HHHHHHcCCCcEEEECCC
Confidence 45566665543 46788877777777666654 69999985443 3333 566666899999998755
Q ss_pred hhhhhcCCCCChhhcccHHHHHH-hCcceeEeeccccCCCCHH-----HHHHHHHH
Q 010610 384 LESMIVHPTPTRAEVSDIAIAVR-EGADAVMLSGETAHGKFPL-----KAVKVMHT 433 (506)
Q Consensus 384 LeSMi~~~~PtRAEv~Dvanav~-dG~D~vmLs~ETA~G~yPv-----eaV~~m~~ 433 (506)
- -|-.|+...+..+. .|.+-++|--=+..-.|+. .++.+|++
T Consensus 139 ~--------~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~ 186 (280)
T 2qkf_A 139 F--------LSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQ 186 (280)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHH
Confidence 3 14457666666655 4664444432222125542 46665543
No 415
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=33.68 E-value=85 Score=31.49 Aligned_cols=60 Identities=22% Similarity=0.126 Sum_probs=40.4
Q ss_pred CceEEEecCChhh-hhhHHHHHHh--CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhh
Q 010610 317 DIHVIVKIESADS-IPNLHSIITA--SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES 386 (506)
Q Consensus 317 ~i~IIaKIEt~~a-veNldeIl~~--sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeS 386 (506)
.++|++ =|+... .+.+.++++. +|.|++-.+-.| | + .--.+|+..|+++|.++.+. ++|+
T Consensus 251 ~iPIa~-dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---i-t~~~~i~~~A~~~g~~~~~~--~~~~ 313 (382)
T 1rvk_A 251 DIPVVG-PESAAGKHWHRAEWIKAGACDILRTGVNDVG---G---I-TPALKTMHLAEAFGMECEVH--GNTA 313 (382)
T ss_dssp SSCEEE-CSSCSSHHHHHHHHHHTTCCSEEEECHHHHT---S---H-HHHHHHHHHHHHTTCCEEEC--CCSH
T ss_pred CCCEEE-eCCccCcHHHHHHHHHcCCCCEEeeCchhcC---C---H-HHHHHHHHHHHHcCCeEeec--CCCC
Confidence 455544 577666 7777777765 799998433221 1 2 22357899999999999986 5555
No 416
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=33.50 E-value=2.5e+02 Score=28.40 Aligned_cols=122 Identities=9% Similarity=0.100 Sum_probs=66.4
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++++.. |..+....+...-..|++.+...+ .| -++++...+++++-. .++.
T Consensus 126 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~~~~~~g-~~~v 187 (398)
T 4d9i_A 126 GVAWAAQQLGQNAVIYM-----------PKGSAQERVDAILNLGAECIVTDM-----NY-DDTVRLTMQHAQQHG-WEVV 187 (398)
T ss_dssp HHHHHHHHHTCEEEEEE-----------CTTCCHHHHHHHHTTTCEEEECSS-----CH-HHHHHHHHHHHHHHT-CEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------eCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHHcC-CEEe
Confidence 45677999999998863 222222335566678998766642 34 478877777665532 2211
Q ss_pred CC-CCCCCCcCcCCChHHHHHHHHHHHHhhcC-----c-eEEEEcCChHHHHHHHhh------CCCCeEEEEeC
Q 010610 445 GA-MPPNLGQAFKNHMSEMFAYHATMMSNTLG-----T-SIVVFTRTGFMAILLSHY------RPSGTIFAFTN 505 (506)
Q Consensus 445 ~~-~~~~~~~~~~~~~~~~ia~~av~~A~~~~-----a-~Iiv~T~sG~tA~~lS~~------RP~~pIia~T~ 505 (506)
.+ .|+.... .+.....-....+.++.++++ . .||+.+-+|.|+--++++ .|...|++|-+
T Consensus 188 ~~~~~~g~~~-~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep 260 (398)
T 4d9i_A 188 QDTAWEGYTK-IPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEP 260 (398)
T ss_dssp CSSCBTTBCH-HHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEE
T ss_pred cCcccCCcCC-CCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEe
Confidence 11 0000000 000111112222345555542 5 788888888886665554 36788998865
No 417
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=33.49 E-value=78 Score=31.32 Aligned_cols=146 Identities=16% Similarity=0.111 Sum_probs=70.2
Q ss_pred CCEEEEcCCC-cc-cCCCCCc-----HHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCccee
Q 010610 340 SDGAMVARGD-LG-AELPIEE-----VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV 412 (506)
Q Consensus 340 sDGImIaRGD-Lg-velg~e~-----V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~v 412 (506)
.|.|++ || |+ +.+|+++ +.......-.-++....|.+++= +..|-....|.++ +.-+...+.-|+++|
T Consensus 38 ~d~ilv--GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD--~pfgsy~~s~~~a-~~na~rl~kaGa~aV 112 (275)
T 1o66_A 38 VEMLLV--GDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSD--LPFGAYQQSKEQA-FAAAAELMAAGAHMV 112 (275)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEE--CCTTSSSSCHHHH-HHHHHHHHHTTCSEE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEE--CCCCCccCCHHHH-HHHHHHHHHcCCcEE
Confidence 799987 55 55 3457763 44444444455666776666542 2222111123221 222345777899999
Q ss_pred EeeccccCCCCHHHHHHHHHHHHHHHhcccc---------CCC-CCCCCC-cCcCCChHHHHHHHHHHHHhhcCc-eEEE
Q 010610 413 MLSGETAHGKFPLKAVKVMHTVSLRTEATIT---------GGA-MPPNLG-QAFKNHMSEMFAYHATMMSNTLGT-SIVV 480 (506)
Q Consensus 413 mLs~ETA~G~yPveaV~~m~~I~~~aE~~~~---------~~~-~~~~~~-~~~~~~~~~~ia~~av~~A~~~~a-~Iiv 480 (506)
-|=+ |. +.+..++.+ .+.-++ ... .+..+. +.......+++.. +.+-.+-|| +|++
T Consensus 113 klEd----g~---e~~~~I~al---~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~r--A~a~~eAGA~~ivl 180 (275)
T 1o66_A 113 KLEG----GV---WMAETTEFL---QMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLND--AKAHDDAGAAVVLM 180 (275)
T ss_dssp EEEC----SG---GGHHHHHHH---HHTTCCEEEEEESCGGGTTC-----------CHHHHHHH--HHHHHHTTCSEEEE
T ss_pred EECC----cH---HHHHHHHHH---HHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHH--HHHHHHcCCcEEEE
Confidence 9853 22 333333333 233211 000 000000 0001112222222 234456789 8877
Q ss_pred EcCChHHHHHHHhhCCCCeEEEE
Q 010610 481 FTRTGFMAILLSHYRPSGTIFAF 503 (506)
Q Consensus 481 ~T~sG~tA~~lS~~RP~~pIia~ 503 (506)
--..-.-++.+++-=+ +|+|.+
T Consensus 181 E~vp~~~a~~it~~l~-iP~igI 202 (275)
T 1o66_A 181 ECVLAELAKKVTETVS-CPTIGI 202 (275)
T ss_dssp ESCCHHHHHHHHHHCS-SCEEEE
T ss_pred ecCCHHHHHHHHHhCC-CCEEEE
Confidence 4444577888887654 898875
No 418
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=33.16 E-value=69 Score=31.76 Aligned_cols=90 Identities=18% Similarity=0.125 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEe-cCChhhhhhHHHHHHh-CCEEEE----c---------CCC--------cccCCCCCc
Q 010610 302 QVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMV----A---------RGD--------LGAELPIEE 358 (506)
Q Consensus 302 edV~~lr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDGImI----a---------RGD--------Lgvelg~e~ 358 (506)
+.++++++ . +.+|++| |..-...+......+. +|+|.| + |.. +...++.
T Consensus 172 ~~i~~vr~-~-----~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~-- 243 (332)
T 1vcf_A 172 ERLAELLP-L-----PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPT-- 243 (332)
T ss_dssp HHHHHHCS-C-----SSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBH--
T ss_pred HHHHHHHc-C-----CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccH--
Q ss_pred HHHHHHHHHHHHHHc-CCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEee
Q 010610 359 VPLLQEEIIRTCRSM-GKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLS 415 (506)
Q Consensus 359 V~~~Qk~II~~c~~~-GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs 415 (506)
...+.+..+.. +.|+|... --..-.|+..++..|+|+|++.
T Consensus 244 ----~~~l~~v~~~~~~ipvia~G------------GI~~~~d~~kal~~GAd~V~ig 285 (332)
T 1vcf_A 244 ----ARAILEVREVLPHLPLVASG------------GVYTGTDGAKALALGADLLAVA 285 (332)
T ss_dssp ----HHHHHHHHHHCSSSCEEEES------------SCCSHHHHHHHHHHTCSEEEEC
T ss_pred ----HHHHHHHHHhcCCCeEEEEC------------CCCCHHHHHHHHHhCCChHhhh
No 419
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=33.16 E-value=41 Score=31.65 Aligned_cols=104 Identities=13% Similarity=0.167 Sum_probs=57.3
Q ss_pred CHHH-hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEec------C-------ChhhhhhHHHHHHhCCEE
Q 010610 278 DWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI------E-------SADSIPNLHSIITASDGA 343 (506)
Q Consensus 278 D~~d-I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKI------E-------t~~aveNldeIl~~sDGI 343 (506)
|.+. ++.+.+.|++.++++- .+.++...+.++.++.+..+...+-| . +.+.++.+.+.+.....-
T Consensus 21 ~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 99 (272)
T 2y1h_A 21 DLDDVLEKAKKANVVALVAVA-EHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDR 99 (272)
T ss_dssp THHHHHHHHHHTTEEEEEECC-SSGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCCC
Confidence 4444 4567789999877663 34677777777666544333322222 1 123344444444321111
Q ss_pred EEcCCCcccCCC--CC---cHHHHHH----HHHHHHHHcCCcEEEEeh
Q 010610 344 MVARGDLGAELP--IE---EVPLLQE----EIIRTCRSMGKAVIVATN 382 (506)
Q Consensus 344 mIaRGDLgvelg--~e---~V~~~Qk----~II~~c~~~GkPvivATq 382 (506)
.+|=|..|.+.. +. .....|+ ..++.|++.|+||++.|.
T Consensus 100 ~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~ 147 (272)
T 2y1h_A 100 LLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSR 147 (272)
T ss_dssp CSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred EEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 123366666652 11 1234554 667889999999999973
No 420
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=33.12 E-value=1.8e+02 Score=26.62 Aligned_cols=101 Identities=7% Similarity=0.129 Sum_probs=61.9
Q ss_pred HHhHhhHhcCCcEEEEccCC------CHHHHHHHHHHHHhcCCCceEEE---ecC--C----hhhhhhHHHHHHh-----
Q 010610 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIV---KIE--S----ADSIPNLHSIITA----- 339 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~------saedV~~lr~~l~~~~~~i~IIa---KIE--t----~~aveNldeIl~~----- 339 (506)
+.++++.+.|+|+|-+.... +..++.++++.+++.|-.+..+. .+- + .++++.+...++.
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 97 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG 97 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 45678889999999988222 34678889999988776543221 121 2 2345666666654
Q ss_pred CCEEEEcCCCcccCCC----CCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 340 SDGAMVARGDLGAELP----IEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 340 sDGImIaRGDLgvelg----~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
++.|.+..|.-.-..+ ++.+...-+++...|.++|..+.+=
T Consensus 98 ~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 142 (278)
T 1i60_A 98 VKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALE 142 (278)
T ss_dssp CCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5677665443211122 2345555677778888889876653
No 421
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=32.97 E-value=55 Score=31.02 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=52.7
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e 357 (506)
.+-.+.+.+.|+|++.+|= ..++++..+|+.+. .-..+..-|=-+.+ +..+.++. +|.++|||+=+..+=|.+
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~---~~~~vtPGI~~~g~--tp~~a~~~Gad~iVVGR~I~~A~dP~~ 198 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDFE---KMTIVSPGMGSQGG--SYGDAVCAGADYEIIGRSIYNAGNPLT 198 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCT---TCEEEECCBSTTSB--CTTHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCC---CCEEEcCCcccCcc--CHHHHHHcCCCEEEECHHhcCCCCHHH
Confidence 4455677889999998774 44788888887763 32333444532221 45444444 999999999888776655
Q ss_pred cHHHHHHHHH
Q 010610 358 EVPLLQEEII 367 (506)
Q Consensus 358 ~V~~~Qk~II 367 (506)
....++++|-
T Consensus 199 aa~~i~~~i~ 208 (222)
T 4dbe_A 199 ALRTINKIIE 208 (222)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 422
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=32.94 E-value=2.5e+02 Score=26.46 Aligned_cols=95 Identities=8% Similarity=0.066 Sum_probs=57.4
Q ss_pred HHhHhhHhcCCcEEEEccCC------CHHHHHHHHHHHHhcCCCceEEE---ecC--C---hhhhhhHHHHHHh-----C
Q 010610 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIV---KIE--S---ADSIPNLHSIITA-----S 340 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~------saedV~~lr~~l~~~~~~i~IIa---KIE--t---~~aveNldeIl~~-----s 340 (506)
+.++.+.+.|.|+|-+.+-. ...++.++++.+++.|-.+..+. .+. . .+.++.+...++. +
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa 119 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGV 119 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHHHHHHHHHHHHcCC
Confidence 45678889999999887631 34567889999988876554432 121 1 1124444444443 6
Q ss_pred CEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEE
Q 010610 341 DGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 341 DGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPviv 379 (506)
+.|.++.+ + ..+++.+...-+++...| +|..+.+
T Consensus 120 ~~v~~g~~--~-~~~~~~~~~~l~~l~~~a--~Gv~l~l 153 (296)
T 2g0w_A 120 KHINCGLL--E-KIPEEQIIVALGELCDRA--EELIIGL 153 (296)
T ss_dssp CEEEECCC--S-CCCHHHHHHHHHHHHHHH--TTSEEEE
T ss_pred CEEEEcCC--C-CCCHHHHHHHHHHHHHHh--cCCEEEE
Confidence 78878765 1 223344555556666666 6766554
No 423
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=32.84 E-value=1.7e+02 Score=26.62 Aligned_cols=99 Identities=9% Similarity=0.022 Sum_probs=62.3
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEe-c-----------CC----hhhhhhHHHHHHh----
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK-I-----------ES----ADSIPNLHSIITA---- 339 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaK-I-----------Et----~~aveNldeIl~~---- 339 (506)
+.++++.+.|.|+|-+.+- ...++.++++.+++.|-.+..+.- . .+ .++++.+...++.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALAL 97 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 4567888999999988763 345688899999887765443321 0 01 2355666666655
Q ss_pred -CCEEEEcCCCcccCCCC----CcHHHHHHHHHHHHHHcCCcEEE
Q 010610 340 -SDGAMVARGDLGAELPI----EEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 340 -sDGImIaRGDLgvelg~----e~V~~~Qk~II~~c~~~GkPviv 379 (506)
++.+.+..|...-..+. +.+....+++...|.++|..+.+
T Consensus 98 G~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 98 NCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp TCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 56777766643222221 23555567778888888887654
No 424
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=32.84 E-value=1e+02 Score=31.16 Aligned_cols=46 Identities=11% Similarity=0.224 Sum_probs=34.2
Q ss_pred HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 125 MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 125 ~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
..+++.++|.+.+.+...|++.+.-.+.++.+|++. | ..+.|++|.
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G-~d~~l~vDa 191 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---G-SSITMILDA 191 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---C-TTSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---C-CCCEEEEEC
Confidence 445677899999999999988877777777777653 4 345666674
No 425
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=32.49 E-value=58 Score=26.92 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=28.7
Q ss_pred HHHHHHHhhcCc-eEEEEcC---------ChHHHHHHHhhCCCCeEEEE
Q 010610 465 YHATMMSNTLGT-SIVVFTR---------TGFMAILLSHYRPSGTIFAF 503 (506)
Q Consensus 465 ~~av~~A~~~~a-~Iiv~T~---------sG~tA~~lS~~RP~~pIia~ 503 (506)
...++.|.+.++ .||+-++ -|+++..+.+.-| |||+.+
T Consensus 100 ~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 100 RTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 344677888899 7777554 2788999999887 999864
No 426
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=32.44 E-value=2.2e+02 Score=26.06 Aligned_cols=126 Identities=14% Similarity=0.077 Sum_probs=67.6
Q ss_pred HhcCCcEEEEccCC----CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHH
Q 010610 286 VDNKVDFYAVSFVK----DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVP 360 (506)
Q Consensus 286 l~~gvD~IalSfV~----saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~ 360 (506)
++.|+|++=+.|+- -.+.|+++|+.. .+..+.+-.|+-.. .-.-+++..+. +|++.+- + .+ -.
T Consensus 28 ~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d~-p~~~~~~~~~aGad~i~vh--~----~~---~~ 95 (218)
T 3jr2_A 28 VASYVDVIEVGTILAFAEGMKAVSTLRHNH--PNHILVCDMKTTDG-GAILSRMAFEAGADWITVS--A----AA---HI 95 (218)
T ss_dssp HGGGCSEEEECHHHHHHHTTHHHHHHHHHC--TTSEEEEEEEECSC-HHHHHHHHHHHTCSEEEEE--T----TS---CH
T ss_pred hcCCceEEEeCcHHHHhcCHHHHHHHHHhC--CCCcEEEEEeeccc-HHHHHHHHHhcCCCEEEEe--c----CC---CH
Confidence 56689998777653 344555555432 12234444454321 11234555555 7988773 1 11 12
Q ss_pred HHHHHHHHHHHHcCCcEEE-EehhhhhhhcCCCCChhhcccHHHHHHhCcceeEe-ecccc--CC-CCHHHHHHHHHHHH
Q 010610 361 LLQEEIIRTCRSMGKAVIV-ATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML-SGETA--HG-KFPLKAVKVMHTVS 435 (506)
Q Consensus 361 ~~Qk~II~~c~~~GkPviv-ATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmL-s~ETA--~G-~yPveaV~~m~~I~ 435 (506)
...++.++.|+++|+.+++ .- ++ +|-. ++..+...|+|.+.+ .+-++ .| .+..+.++.+++++
T Consensus 96 ~~~~~~~~~~~~~g~~~~~d~l--------~~-~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~ 163 (218)
T 3jr2_A 96 ATIAACKKVADELNGEIQIEIY--------GN-WTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLS 163 (218)
T ss_dssp HHHHHHHHHHHHHTCEEEEECC--------SS-CCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccceeee--------ec-CCHH---HHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHh
Confidence 3456788889999998774 21 11 3432 344555569997654 32211 12 34556666666665
No 427
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=32.43 E-value=64 Score=33.29 Aligned_cols=65 Identities=9% Similarity=0.060 Sum_probs=40.7
Q ss_pred CCceEEEecCCCCCCHH----HHHHHHHhCCcEEEEeCCCCCh---HHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 108 RKTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDH---ASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 108 r~tKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~---e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
.+..+.+|.... .++| ..+++.+.|.+.+.|++.||.. ...++-++.++.+.+..| ..+.|++|.
T Consensus 166 ~~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG-~d~~L~vDa 237 (412)
T 3stp_A 166 DRIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIG-YDNDLMLEC 237 (412)
T ss_dssp SSEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC-SSSEEEEEC
T ss_pred ceEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcC-CCCeEEEEC
Confidence 345566665332 2444 4455777899999999999732 234455556666555666 556677774
No 428
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=32.36 E-value=71 Score=31.73 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=22.7
Q ss_pred HHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEE
Q 010610 470 MSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAF 503 (506)
Q Consensus 470 ~A~~~~a-~Iiv~T~sG~tA~~lS~~RP~~pIia~ 503 (506)
+-.+-|| +|++--..-..++.+++-= ++|+|.+
T Consensus 187 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igI 220 (281)
T 1oy0_A 187 AVAEAGAFAVVMEMVPAELATQITGKL-TIPTVGI 220 (281)
T ss_dssp HHHHHTCSEEEEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred HHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEe
Confidence 3445688 8877443457788888765 4898875
No 429
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=32.27 E-value=46 Score=31.02 Aligned_cols=49 Identities=18% Similarity=0.176 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCCcEEEEeCC-CC----------------ChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 123 REMIWKLAEAGMNVARLNMS-HG----------------DHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 123 ~e~i~~li~aGm~v~RiN~S-Hg----------------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
.+.|+.|-+.|+|+.|+=++ ++ ..+.|.+.++.+=++..+.| +.+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G---i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN---ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC---CeEEEEe
Confidence 34578899999999998431 11 11345566666666667777 6677775
No 430
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=32.17 E-value=62 Score=31.37 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=37.6
Q ss_pred CeEecCCCEEEEEEecCCCCceEEEeccchhh--------------hhcCCCCEEEEeCCeEEEEEEEEe
Q 010610 187 PITLTSGQEFTFTIQRGVGSAECVSVNYDDFV--------------NDVEVGDMLLVDGGMMSLLVKSKT 242 (506)
Q Consensus 187 ~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l~--------------~~v~~Gd~IliDDG~i~l~V~~~~ 242 (506)
...|++||.++|+--++...-+.+..|..+.. -.+.+|+.++=|.|+..++|++-+
T Consensus 46 s~~v~~Gq~lRI~d~eG~Q~~D~l~~na~d~~Er~s~~~T~~~q~~~~lt~G~~L~S~~gRpl~tIv~DT 115 (234)
T 3oru_A 46 AIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLEDS 115 (234)
T ss_dssp EEEECTTCEEEEECSSSSCCEEEEEEETTEEEEEBCHHHHHHHHTSSSCCTTCEEEBTTSSEEEEEEEEC
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEEecCCCCccccCHHHHHHHhccccCCCCCEeEeCCCCeeEEEEccC
Confidence 46899999999986543322223333322211 157889999999999999998753
No 431
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=32.14 E-value=86 Score=31.29 Aligned_cols=46 Identities=13% Similarity=0.227 Sum_probs=34.0
Q ss_pred HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 125 MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 125 ~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
..+++.+.|.+.+.+++.|++.+.-.+.++.+|++ .| ..+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g-~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VG-SAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hC-CCCeEEEEC
Confidence 34567889999999999998877777777777765 34 345566664
No 432
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=32.06 E-value=2.6e+02 Score=25.99 Aligned_cols=100 Identities=14% Similarity=-0.095 Sum_probs=61.6
Q ss_pred HHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEe---c---CChhhhhhHHHHHHh-----CCEEEEcC-
Q 010610 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK---I---ESADSIPNLHSIITA-----SDGAMVAR- 347 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaK---I---Et~~aveNldeIl~~-----sDGImIaR- 347 (506)
+.++.+.+.|+|+|=+...- . ++.++++.+++.|-.+..+.- + ...++++.+...++. ++.|.+..
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~ 112 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQ 112 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 45678889999999877432 2 788899999988765444310 0 112345556655554 56776654
Q ss_pred -----CCcccCCC----------CCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 348 -----GDLGAELP----------IEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 348 -----GDLgvelg----------~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
|.....++ ++.+...-+++...|.++|..+.+=+
T Consensus 113 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 113 TYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp TTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 33211111 12455566788888999998877643
No 433
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=32.00 E-value=3.8e+02 Score=26.36 Aligned_cols=122 Identities=11% Similarity=0.008 Sum_probs=63.6
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChh---h-cccHHHHHHhCcceeEeeccccCCCCHHHHHH-HHHHHHHHHh
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRA---E-VSDIAIAVREGADAVMLSGETAHGKFPLKAVK-VMHTVSLRTE 439 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRA---E-v~Dvanav~dG~D~vmLs~ETA~G~yPveaV~-~m~~I~~~aE 439 (506)
-+...|+..|.++.+... . ..|... + ..-+...-..|++.+....+ .+..++++ ...++..+-.
T Consensus 97 alA~aa~~~G~~~~iv~p------~-~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~----~~~~~~~~~~a~~l~~~~~ 165 (342)
T 4d9b_A 97 QTAAVAAKLGLHCVALLE------N-PIGTTAENYLTNGNRLLLDLFNTQIEMCDAL----TDPDAQLQTLATRIEAQGF 165 (342)
T ss_dssp HHHHHHHHHTCEEEEEEE------C-TTCCCCHHHHHSHHHHHHHHTTCEEEECSCC----SSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCcEEEEEe------C-CCCCccccccccchHHHHHHCCCEEEEECch----hhHHHHHHHHHHHHHhcCC
Confidence 345679999999887631 1 111100 0 11244566789997776532 23334443 2222221111
Q ss_pred ccccCCCCCCCCCcCcCCChHH--HHHHHHHHHHhhcC----c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 440 ATITGGAMPPNLGQAFKNHMSE--MFAYHATMMSNTLG----T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~--~ia~~av~~A~~~~----a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
..+.. + .+ .. ++.. -....+.++.++++ . .||+.+-+|.|+--+++ +.|.+.|+++.+
T Consensus 166 ~~~~~----p--~~-~~-n~~~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~ 234 (342)
T 4d9b_A 166 RPYVI----P--VG-GS-SALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTV 234 (342)
T ss_dssp CEEEC----C--GG-GC-SHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred ceEEe----C--CC-CC-ChHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEe
Confidence 11111 0 00 11 2211 22334566777764 4 78888888877665554 579999999875
No 434
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=31.79 E-value=54 Score=31.77 Aligned_cols=53 Identities=21% Similarity=0.154 Sum_probs=35.4
Q ss_pred CCCHHHHHHHH-HhCCcEEEEeCCCC------ChHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 120 TNTREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 120 s~~~e~i~~li-~aGm~v~RiN~SHg------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
..+.+.++.|. +.|+|++|+-+.+. +++ +.+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~-~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-VKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTT-HHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHH-HHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34678899998 67999999987542 222 3444454445555666 678888755
No 435
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=31.76 E-value=54 Score=33.65 Aligned_cols=52 Identities=15% Similarity=0.339 Sum_probs=33.8
Q ss_pred CHHHHHHHHHhCCcEEEEeCCC-------CCh---HHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 122 TREMIWKLAEAGMNVARLNMSH-------GDH---ASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SH-------g~~---e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
+.+.++.|.+.|+|++||-++. |++ +...+.++.+=+...+.| +.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G---i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS---LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT---CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC---CEEEEECCC
Confidence 4788999999999999997641 211 113334444444445555 778888754
No 436
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=31.70 E-value=2.3e+02 Score=27.87 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCcEEEEehhhhhhhcCCCC-Ch--hh----cccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 364 EEIIRTCRSMGKAVIVATNMLESMIVHPTP-TR--AE----VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 364 k~II~~c~~~GkPvivATqmLeSMi~~~~P-tR--AE----v~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
.-+...|+..|.++.+... .+ .| .. .+ -..+...-..|++.+....+.. ...+..+.+.+.+++.
T Consensus 82 ~alA~~a~~~G~~~~iv~p------~~-~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~-~~~~~~~~~~a~~l~~ 153 (341)
T 1f2d_A 82 RMVAALAAKLGKKCVLIQE------DW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFD-IGMRKSFANALQELED 153 (341)
T ss_dssp HHHHHHHHHHTCEEEEEEE------CC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCC-SSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCceEEEec------cC-CCccccccccccccccHHHHHhCCCEEEEeCCccc-hhHHHHHHHHHHHHHh
Confidence 3456789999999887621 11 11 00 11 1245667778999877653321 1112345555555554
Q ss_pred HHhccccCCCC-CCCCCcCcCCChHHHHHHHHHHHHhhcC-----c-eEEEEcCChHHHHHHHh----hCCCCeEEEEeC
Q 010610 437 RTEATITGGAM-PPNLGQAFKNHMSEMFAYHATMMSNTLG-----T-SIVVFTRTGFMAILLSH----YRPSGTIFAFTN 505 (506)
Q Consensus 437 ~aE~~~~~~~~-~~~~~~~~~~~~~~~ia~~av~~A~~~~-----a-~Iiv~T~sG~tA~~lS~----~RP~~pIia~T~ 505 (506)
+-...++...- |.+ +. ........+.++.++++ . .||+..-+|.|+--+++ +.|.+.|++|-+
T Consensus 154 ~~~~~~~i~~~~~~n---p~---~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~ 227 (341)
T 1f2d_A 154 AGHKPYPIPAGCSEH---KY---GGLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDA 227 (341)
T ss_dssp TTCCEEEECGGGTTS---TT---TTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEEC
T ss_pred cCCcEEEeCCCcCCC---Cc---cHHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence 32211211111 221 11 11223334556666653 4 88998889998666554 568899999865
No 437
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=31.68 E-value=2.7e+02 Score=25.43 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=16.4
Q ss_pred CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 340 sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
+|||++...+. ...+..+.+.|+|+++.
T Consensus 64 vdgiIi~~~~~-------------~~~~~~l~~~~iPvV~i 91 (276)
T 3jy6_A 64 FDGLILQSFSN-------------PQTVQEILHQQMPVVSV 91 (276)
T ss_dssp CSEEEEESSCC-------------HHHHHHHHTTSSCEEEE
T ss_pred CCEEEEecCCc-------------HHHHHHHHHCCCCEEEE
Confidence 67777754332 23455566677776654
No 438
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=31.55 E-value=54 Score=32.69 Aligned_cols=51 Identities=18% Similarity=0.215 Sum_probs=34.0
Q ss_pred CHHHHHHHH-HhCCcEEEEeCCCC------ChHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 122 TREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 122 ~~e~i~~li-~aGm~v~RiN~SHg------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
+.+.+..|. +.|+|++||-+..+ +++.+ +.++.+=+...+.| +.+++|+-+
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~G---i~VIld~H~ 112 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEHD---MYVIVDWHV 112 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHCC---CEEEEEecc
Confidence 578899997 89999999987742 23333 34444434445555 778889765
No 439
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=31.55 E-value=49 Score=33.25 Aligned_cols=70 Identities=19% Similarity=0.334 Sum_probs=50.8
Q ss_pred hhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHh--
Q 010610 331 PNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVRE-- 407 (506)
Q Consensus 331 eNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~d-- 407 (506)
..++.++.. ..+|++.|||+- -+.+++.|++.|.|++. | +.+|-.=+..+.+++..
T Consensus 71 ~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T---------~~~ts~~~~~l~~~l~~~~ 129 (314)
T 1ko7_A 71 GRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-S---------KIATTQLMSRLTTFLEHEL 129 (314)
T ss_dssp THHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-C---------CSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-E---------CCchhHHHHHHHHHHHHhh
Confidence 445555543 569999999984 23488999999999885 3 34444445566777765
Q ss_pred --------------CcceeEeeccccCCC
Q 010610 408 --------------GADAVMLSGETAHGK 422 (506)
Q Consensus 408 --------------G~D~vmLs~ETA~G~ 422 (506)
| -++++.|++-.||
T Consensus 130 ~~~~~~H~~~v~~~g-~~vl~~G~sG~GK 157 (314)
T 1ko7_A 130 ARTTSLHGVLVDVYG-VGVLITGDSGIGK 157 (314)
T ss_dssp CEEEEEESEEEEETT-EEEEEEESTTSSH
T ss_pred ccceeeeEEEEEECC-EEEEEEeCCCCCH
Confidence 4 5899999999999
No 440
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=31.44 E-value=1.7e+02 Score=28.75 Aligned_cols=87 Identities=20% Similarity=0.300 Sum_probs=50.8
Q ss_pred CCEEEEcCCCcc--cCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccH-HHHHHhCcceeEeec
Q 010610 340 SDGAMVARGDLG--AELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDI-AIAVREGADAVMLSG 416 (506)
Q Consensus 340 sDGImIaRGDLg--velg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dv-anav~dG~D~vmLs~ 416 (506)
+||+++. |--| ..+..++-..+.+..++.+ -..|||.-| ...+-.|.-+. ..|-..|+|++|+..
T Consensus 43 v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999985 2111 2233333333334444444 357888765 23344454444 456677999999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE 439 (506)
=-.. .-.-+.++....|+..+.
T Consensus 111 P~~~-~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 PPSL-RTDEQITTYFRQATEAIG 132 (313)
T ss_dssp CTTC-CSHHHHHHHHHHHHHHHC
T ss_pred CCCC-CCHHHHHHHHHHHHHhCC
Confidence 3211 224677888999998886
No 441
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=31.36 E-value=34 Score=21.63 Aligned_cols=17 Identities=12% Similarity=0.292 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHh
Q 010610 146 HASHQKVIDLVKEYNAQ 162 (506)
Q Consensus 146 ~e~~~~~i~~ir~~~~~ 162 (506)
.++.+++++|+|+++-+
T Consensus 2 eeeyqemlenlreaevk 18 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVK 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 46789999999998744
No 442
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=31.27 E-value=1.1e+02 Score=30.63 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=38.3
Q ss_pred hHhhHhcCCcEEEEcc--C-C----------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEc
Q 010610 282 IKFGVDNKVDFYAVSF--V-K----------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVA 346 (506)
Q Consensus 282 I~~al~~gvD~IalSf--V-~----------saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIa 346 (506)
++...+.|+|+|-++- . . +.+-+.++++.+ +++||+- ......++.+++++. +|+|++|
T Consensus 245 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~-Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 245 ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAV-GLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEEC-SSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEEE-CCCCCHHHHHHHHHCCCceEEEec
Confidence 3455578999999983 1 0 122344444433 4666662 322334566777776 8999999
Q ss_pred CCCc
Q 010610 347 RGDL 350 (506)
Q Consensus 347 RGDL 350 (506)
|+=|
T Consensus 319 R~~l 322 (349)
T 3hgj_A 319 RVLL 322 (349)
T ss_dssp THHH
T ss_pred HHHH
Confidence 9855
No 443
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=31.22 E-value=1.6e+02 Score=29.03 Aligned_cols=89 Identities=18% Similarity=0.104 Sum_probs=51.2
Q ss_pred CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhccc-HHHHHHhCcceeEeec
Q 010610 340 SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSD-IAIAVREGADAVMLSG 416 (506)
Q Consensus 340 sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~D-vanav~dG~D~vmLs~ 416 (506)
+||+++. |-- +..+..++-..+.+..++.++ -..|||..+ ...+-.|.-+ .-.+-..|+|++|+..
T Consensus 50 v~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 50 CDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGA---------GTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999985 211 122333343334444444432 246888765 2334455444 4456678999999964
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 010610 417 ETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 417 ETA~G~yPveaV~~m~~I~~~aE 439 (506)
=--...-+-+.++....|+..+.
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 43333336778888888877664
No 444
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=31.21 E-value=77 Score=30.81 Aligned_cols=90 Identities=7% Similarity=0.039 Sum_probs=48.1
Q ss_pred hHhhHhcCCcEEEEccCC-------------------------C----HHHHHHHHHHHHhcCCCceEEE--ecCChhhh
Q 010610 282 IKFGVDNKVDFYAVSFVK-------------------------D----AQVVHELKNYLKSCGADIHVIV--KIESADSI 330 (506)
Q Consensus 282 I~~al~~gvD~IalSfV~-------------------------s----aedV~~lr~~l~~~~~~i~IIa--KIEt~~av 330 (506)
.+.+.+.|+|+|.++--- . +..+..++++-+..+.+++||+ -|.|.+-+
T Consensus 178 a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da 257 (311)
T 1jub_A 178 AEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDA 257 (311)
T ss_dssp HHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHH
T ss_pred HHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHH
Confidence 356678899999876421 0 1123444443333334688887 46665433
Q ss_pred hhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCC
Q 010610 331 PNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGK 375 (506)
Q Consensus 331 eNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~Gk 375 (506)
.. -|..-+|+|+|||+=|. -++.-+..+.+.+-....+.|.
T Consensus 258 ~~--~l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 258 FE--HLLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp HH--HHHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTC
T ss_pred HH--HHHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCC
Confidence 22 12223999999998553 0222333444444444555553
No 445
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=31.14 E-value=2.6e+02 Score=27.20 Aligned_cols=127 Identities=13% Similarity=0.070 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCC---hhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhcc
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPT---RAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEAT 441 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~Pt---RAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~ 441 (506)
-+...|+..|.++.+... .+..+. ...-..+...-..|++.+...++... .++-.+.+...+++.+-...
T Consensus 83 alA~~a~~~G~~~~iv~p------~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~ 155 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLVQE------NWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDI-GFRRSWEDALESVRAAGGKP 155 (338)
T ss_dssp HHHHHHHHHTCEEEEEEE------CCSSCCCTTTTTSHHHHHHHHTTCEEEECCC--------CHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCceEEEec------CCCCccccccccCccHHHHHhCCCEEEEeCCcchh-hHHHHHHHHHHHHHhcCCce
Confidence 345678999999887621 111111 00011345566679997765432111 01111344444443322111
Q ss_pred ccCCCC-CCCCCcCcCCChHHHHHHHHHHHHhhc-----Cc-eEEEEcCChHHHHHHHhh-----CCCCeEEEEeC
Q 010610 442 ITGGAM-PPNLGQAFKNHMSEMFAYHATMMSNTL-----GT-SIVVFTRTGFMAILLSHY-----RPSGTIFAFTN 505 (506)
Q Consensus 442 ~~~~~~-~~~~~~~~~~~~~~~ia~~av~~A~~~-----~a-~Iiv~T~sG~tA~~lS~~-----RP~~pIia~T~ 505 (506)
+....- |.+ +. ..+.....+.++.+++ .. .||+.+-+|.|+--++++ .|. .|+++.+
T Consensus 156 ~~~p~~~~~n---~~---~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~ 224 (338)
T 1tzj_A 156 YAIPAGCSDH---PL---GGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDA 224 (338)
T ss_dssp EECCGGGTSS---TT---TTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEEC
T ss_pred EEeCCCcCCC---cc---cHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEc
Confidence 211111 111 11 1112223345666555 34 889999999998777753 677 9999875
No 446
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=31.13 E-value=1.5e+02 Score=28.34 Aligned_cols=68 Identities=10% Similarity=0.264 Sum_probs=41.2
Q ss_pred HHHHHHHHHhcCCCceEEEecCChh-hhhhHHHHHH---hCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEE
Q 010610 304 VHELKNYLKSCGADIHVIVKIESAD-SIPNLHSIIT---ASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIV 379 (506)
Q Consensus 304 V~~lr~~l~~~~~~i~IIaKIEt~~-aveNldeIl~---~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPviv 379 (506)
+..+.+.+.+.|.++.+..-=.+.+ -.+.++.+++ -.|||++.+ +- . ....+++.+.++|+||++
T Consensus 23 ~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~-------~---~~~~~~~~~~~~giPvV~ 91 (350)
T 3h75_A 23 SQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQ-------Y---VAPQILRLSQGSGIKLFI 91 (350)
T ss_dssp HHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CS-------S---HHHHHHHHHTTSCCEEEE
T ss_pred HHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-ch-------h---hHHHHHHHHHhCCCcEEE
Confidence 4445555666666554442111221 2456777777 589999963 21 1 235677889999999997
Q ss_pred Eeh
Q 010610 380 ATN 382 (506)
Q Consensus 380 ATq 382 (506)
...
T Consensus 92 ~~~ 94 (350)
T 3h75_A 92 VNS 94 (350)
T ss_dssp EES
T ss_pred EcC
Confidence 653
No 447
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=31.03 E-value=42 Score=34.63 Aligned_cols=51 Identities=14% Similarity=0.305 Sum_probs=34.0
Q ss_pred CHHHHHHHHHhCCcEEEEeCCC-------CChH--HHHHHHHHHHHHHHhcCCceEEEEeecC
Q 010610 122 TREMIWKLAEAGMNVARLNMSH-------GDHA--SHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (506)
Q Consensus 122 ~~e~i~~li~aGm~v~RiN~SH-------g~~e--~~~~~i~~ir~~~~~~~~~~i~Il~DL~ 175 (506)
+++.++.|.++|+|++||-+++ +++- ...+.++.+=+...+.| +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G---l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN---IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 5789999999999999998852 2210 12334444444455555 88999974
No 448
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.91 E-value=1.1e+02 Score=28.20 Aligned_cols=97 Identities=10% Similarity=-0.021 Sum_probs=55.3
Q ss_pred HHHhHhhHhcCCcEEEEccCC-CHHHHHHH-HHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVK-DAQVVHEL-KNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELP 355 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~-saedV~~l-r~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg 355 (506)
.+.++.+++.|+++|.+-.=. +.+++.++ +++... ....++.- ++.+--++. +|||-++..|+....
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~~~--~~~~livn-------d~~~~A~~~gadgvhl~~~~~~~~~- 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTLIPEK--YHRRIVTH-------EHFYLKEEFNLMGIHLNARNPSEPH- 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCGG--GGGGEEES-------SCTTHHHHTTCSEEECCSSSCSCCT-
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHH--hCCeEEEe-------CCHHHHHHcCCCEEEECcccccccc-
Confidence 577888999999999887422 23333322 222222 13444442 233333334 799998877773221
Q ss_pred CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 356 IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 356 ~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
..++.++..+. |..| +..|. .|+|.+.++.
T Consensus 86 ----------------~~~~~ig~s~~-----------t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 86 ----------------DYAGHVSCSCH-----------SVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp ----------------TCCSEEEEEEC-----------SHHH---HHTTG-GGSSEEEECC
T ss_pred ----------------ccCCEEEEecC-----------CHHH---HHHHh-hCCCEEEECC
Confidence 12667776643 3333 44455 7999998753
No 449
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=30.89 E-value=92 Score=25.54 Aligned_cols=39 Identities=18% Similarity=0.069 Sum_probs=29.5
Q ss_pred HHHHHHHHhhcCc-eEEEEcCC---------hHHHHHHHhhCCCCeEEEE
Q 010610 464 AYHATMMSNTLGT-SIVVFTRT---------GFMAILLSHYRPSGTIFAF 503 (506)
Q Consensus 464 a~~av~~A~~~~a-~Iiv~T~s---------G~tA~~lS~~RP~~pIia~ 503 (506)
+...++.|.+.++ .||+-++. |+++..+.+.-| |||+.+
T Consensus 88 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 136 (137)
T 2z08_A 88 AEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAP-CPVLLV 136 (137)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCC-CCEEEe
Confidence 3344678888999 77776552 688999998864 999975
No 450
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=30.89 E-value=1.6e+02 Score=28.60 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=61.5
Q ss_pred hcCCCCEEEEeCC---eEEEEEEEEeCCeEEEEEeeCcEeCCCCccccCCCccCCCCCCccCH--HHhHhhHhcCCcEEE
Q 010610 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW--DDIKFGVDNKVDFYA 294 (506)
Q Consensus 220 ~v~~Gd~IliDDG---~i~l~V~~~~~~~v~~~V~~gG~L~s~KgVnlp~~~~~lp~ltekD~--~dI~~al~~gvD~Ia 294 (506)
-+++||.|.+-|| ....+|.+++++.+.+++..--........ ...+ ...|+..|+ ..|+.+.+.||+-|.
T Consensus 36 Rl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~---~v~L-~~al~K~~r~e~ilqkatELGV~~I~ 111 (268)
T 1vhk_A 36 RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPI---KVYI-ASGLPKGDKLEWIIQKGTELGAHAFI 111 (268)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSS---EEEE-EEECCSTTHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCc---cEEE-EEeeecCccHHHHHHHHHHhCcCEEE
Confidence 3478999987553 566788888999888877642111111110 1111 122233343 356789999999653
Q ss_pred EccC-CC---------HHHHHHHHHHH----HhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEc
Q 010610 295 VSFV-KD---------AQVVHELKNYL----KSCGADIHVIVKIESADSIPNLHSIITASDGAMVA 346 (506)
Q Consensus 295 lSfV-~s---------aedV~~lr~~l----~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIa 346 (506)
.=+. ++ .......++++ ++++. ..+.+|+.+..++.+-+-....|..+++
T Consensus 112 p~~s~Rsv~~~~~~~~~kk~~Rw~~i~~eAaeQs~R--~~iP~v~~~~~~~~~l~~~~~~~~~lv~ 175 (268)
T 1vhk_A 112 PFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYR--NEVPRVMDVHSFQQLLQRMQDFDKCVVA 175 (268)
T ss_dssp EECCTTCCCC---------HHHHHHHHHHHHHHTTC--SSCCEECCCBCHHHHHHHGGGSSEEEEE
T ss_pred EEEeeeeeeecccchhhhHHHHHHHHHHHHHHHcCC--CCCcEEecCCCHHHHHhhCccCCeEEEE
Confidence 3222 22 11244554444 34443 3456666554444332211223555554
No 451
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=30.75 E-value=59 Score=31.39 Aligned_cols=49 Identities=16% Similarity=0.145 Sum_probs=31.6
Q ss_pred ceEEEecC-CCC-CCHHHHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHH
Q 010610 110 TKIVCTIG-PST-NTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYN 160 (506)
Q Consensus 110 tKIi~TiG-Pss-~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~ 160 (506)
++...|.| |.- .+.+.++.|.++|.|.+=+-.|.|...+ +.++.+++..
T Consensus 8 ~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~--~~~~~v~~ir 58 (240)
T 1viz_A 8 EWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTED--NVLRMMSKVR 58 (240)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHH--HHHHHHHHHT
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHH--HHHHHHHHhh
Confidence 44555665 543 6789999999999999999999987632 3444555443
No 452
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.74 E-value=1.5e+02 Score=28.88 Aligned_cols=91 Identities=12% Similarity=0.164 Sum_probs=52.4
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHc---CCcEEEEehhhhhhhcCCCCChhhcccHH-HHHH
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSM---GKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVR 406 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~---GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~ 406 (506)
+-.++. +||+++. |-- +..+..++ ++++++.+.++ ..|||.-+- ..+-.|.-+.+ .|-.
T Consensus 31 ~~li~~Gv~gl~~~-GttGE~~~Ls~~E----r~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 31 RRCLSNGCDSVTLF-GTTGEGCSVGSRE----RQAILSSFIAAGIAPSRIVTGVL---------VDSIEDAADQSAEALN 96 (294)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHH----HHHHHHHHHHTTCCGGGEEEEEC---------CSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHH----HHHHHHHHHHHhCCCCcEEEeCC---------CccHHHHHHHHHHHHh
Confidence 334444 7999985 211 12223233 34444444432 368887652 33334544444 4666
Q ss_pred hCcceeEeeccccCC-CCHHHHHHHHHHHHHHH
Q 010610 407 EGADAVMLSGETAHG-KFPLKAVKVMHTVSLRT 438 (506)
Q Consensus 407 dG~D~vmLs~ETA~G-~yPveaV~~m~~I~~~a 438 (506)
.|+|++|+..=--.. .-+-+.++....|+..+
T Consensus 97 ~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 97 AGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp TTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 799999997443333 34567888999998877
No 453
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=30.09 E-value=1.8e+02 Score=28.75 Aligned_cols=117 Identities=15% Similarity=0.235 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEeh
Q 010610 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATN 382 (506)
Q Consensus 304 V~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATq 382 (506)
...++.+.++.+..++|..........+.+.+-++. ..-+|+. |-++|+++=...-+++++.|++.|..|=.=-.
T Consensus 67 ~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD----gS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG 142 (288)
T 3q94_A 67 VAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMID----ASHHPFEENVETTKKVVEYAHARNVSVEAELG 142 (288)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEEC----CTTSCHHHHHHHHHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEe----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEee
Q ss_pred hh---hhhhcCCCCChhhcccHHHHH-HhCcceeEeeccccCCCCH
Q 010610 383 ML---ESMIVHPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP 424 (506)
Q Consensus 383 mL---eSMi~~~~PtRAEv~Dvanav-~dG~D~vmLs~ETA~G~yP 424 (506)
.+ |.-+.+..-....-.++..++ .-|+|++-.+-=|+.|.||
T Consensus 143 ~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 143 TVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp BCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred eeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC
No 454
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.08 E-value=94 Score=28.55 Aligned_cols=68 Identities=22% Similarity=0.158 Sum_probs=41.4
Q ss_pred cCHHHhHhhHhcCCcEEEEccCC---CH------HHHHHHHHHHHhcCCCceEEE--ecCChhhhhhHHHHHHh-CCEEE
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFVK---DA------QVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAM 344 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV~---sa------edV~~lr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDGIm 344 (506)
.+.+++..+. .|+|||.++-+- +. -+...++.+.+....++++++ -|- .+|+.+.++. ++||-
T Consensus 96 ~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~----~~nv~~~~~~Ga~gVa 170 (210)
T 3ceu_A 96 HSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN----EDNLLEIKDFGFGGAV 170 (210)
T ss_dssp CSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC----TTTHHHHHHTTCSEEE
T ss_pred CCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC----HHHHHHHHHhCCCEEE
Confidence 4566777777 899999986541 11 134445554432113456666 232 4688888877 89998
Q ss_pred EcCCC
Q 010610 345 VARGD 349 (506)
Q Consensus 345 IaRGD 349 (506)
++++=
T Consensus 171 v~s~i 175 (210)
T 3ceu_A 171 VLGDL 175 (210)
T ss_dssp ESHHH
T ss_pred EhHHh
Confidence 88653
No 455
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=30.07 E-value=2.5e+02 Score=27.41 Aligned_cols=133 Identities=17% Similarity=0.132 Sum_probs=77.0
Q ss_pred hhHhcCCcEEEE--cc---CCCHHHHHHHHHHHHhcCCCceEEEecCChh-----------hhhhHHHHHHh--CCEEEE
Q 010610 284 FGVDNKVDFYAV--SF---VKDAQVVHELKNYLKSCGADIHVIVKIESAD-----------SIPNLHSIITA--SDGAMV 345 (506)
Q Consensus 284 ~al~~gvD~Ial--Sf---V~saedV~~lr~~l~~~~~~i~IIaKIEt~~-----------aveNldeIl~~--sDGImI 345 (506)
.+...|+|.|=+ =| ....+++.++-..+++.-...+||.-+-+.. -++-+...++. +|.|=|
T Consensus 60 ~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDv 139 (276)
T 3o1n_A 60 AYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDL 139 (276)
T ss_dssp HHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred HHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 344478887643 33 3344566666555655444677887665521 12223333332 455433
Q ss_pred cCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCcceeEeeccccCCCCH
Q 010610 346 ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGKFP 424 (506)
Q Consensus 346 aRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~D~vmLs~ETA~G~yP 424 (506)
|+-.. ....++++..+++.|..+|..-+-+ ...|+..|+...++ +...|+|.+=+. ..-+-+
T Consensus 140 -------El~~~--~~~~~~l~~~a~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~~~~~GaDIvKia---~~a~s~ 202 (276)
T 3o1n_A 140 -------ELFTG--DDEVKATVGYAHQHNVAVIMSNHDF-----HKTPAAEEIVQRLRKMQELGADIPKIA---VMPQTK 202 (276)
T ss_dssp -------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEEE---ECCSSH
T ss_pred -------ECcCC--HHHHHHHHHHHHhCCCEEEEEeecC-----CCCcCHHHHHHHHHHHHHcCCCEEEEE---ecCCCh
Confidence 33222 3577889999999999999876544 34777777666554 567799987664 123334
Q ss_pred HHHHHHHHH
Q 010610 425 LKAVKVMHT 433 (506)
Q Consensus 425 veaV~~m~~ 433 (506)
.+....+.-
T Consensus 203 ~Dvl~Ll~~ 211 (276)
T 3o1n_A 203 ADVLTLLTA 211 (276)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455554443
No 456
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=30.07 E-value=1.8e+02 Score=26.94 Aligned_cols=147 Identities=12% Similarity=0.003 Sum_probs=80.2
Q ss_pred HHhHhhHhcCCcEEEEccCCC-H---HHHHHHHHHHHhcCCCceEEEe------cCC------hhhhhhHHHHHHh----
Q 010610 280 DDIKFGVDNKVDFYAVSFVKD-A---QVVHELKNYLKSCGADIHVIVK------IES------ADSIPNLHSIITA---- 339 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~s-a---edV~~lr~~l~~~~~~i~IIaK------IEt------~~aveNldeIl~~---- 339 (506)
+.++.+.+.|+|+|-+..-.. . .++.++++.+++.|-.+..+.- +-+ .++++.+...++.
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 100 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLL 100 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 456788899999998876442 2 6899999999988876555431 221 1344566666554
Q ss_pred -CCEEEEc----CCC--cccCCC----CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhC
Q 010610 340 -SDGAMVA----RGD--LGAELP----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG 408 (506)
Q Consensus 340 -sDGImIa----RGD--Lgvelg----~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG 408 (506)
++.+.+. .|. +.-... ++.+...-+++...|.++|..+.+=+. ...-.+...|-.++.++...+.
T Consensus 101 G~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~--~~~~~~~~~~~~~~~~l~~~~~-- 176 (290)
T 2qul_A 101 GAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVV--NRFEQWLCNDAKEAIAFADAVD-- 176 (290)
T ss_dssp TCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECC--CTTTCSSCCSHHHHHHHHHHHC--
T ss_pred CCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeC--ccccccccCCHHHHHHHHHHcC--
Confidence 4555431 132 111111 124555557778888899987665321 0001223345555555555442
Q ss_pred cceeEeecccc----CCCCHHHHHHH
Q 010610 409 ADAVMLSGETA----HGKFPLKAVKV 430 (506)
Q Consensus 409 ~D~vmLs~ETA----~G~yPveaV~~ 430 (506)
.+.+-+.-+|. .|.-|.+.++.
T Consensus 177 ~~~~g~~~D~~h~~~~g~d~~~~l~~ 202 (290)
T 2qul_A 177 SPACKVQLDTFHMNIEETSFRDAILA 202 (290)
T ss_dssp CTTEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred CCCEEEEEEchhhhhcCCCHHHHHHH
Confidence 23333333442 25556665553
No 457
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=29.84 E-value=65 Score=30.99 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=33.8
Q ss_pred ceEEEecC-CCC-CCHHHHHHHHHhCCcEEEEeCCCCCh-HHHHHHHHHHH
Q 010610 110 TKIVCTIG-PST-NTREMIWKLAEAGMNVARLNMSHGDH-ASHQKVIDLVK 157 (506)
Q Consensus 110 tKIi~TiG-Pss-~~~e~i~~li~aGm~v~RiN~SHg~~-e~~~~~i~~ir 157 (506)
.+...|.| |.- .+.+.++.|.++|.|+.=|-.|+|.. +...++++.+|
T Consensus 8 ~~~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir 58 (234)
T 2f6u_A 8 KWRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVS 58 (234)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHT
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhc
Confidence 34445555 543 67899999999999999999999865 33444444444
No 458
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=29.72 E-value=5.1e+02 Score=27.17 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=76.2
Q ss_pred HHHhHhhHhcCCcEEEEc-cCCCHHHHHHHHHHHHhcCCCceEEEecC--Ch---h-hhhhHHHHHHh-CCEEEEcCCCc
Q 010610 279 WDDIKFGVDNKVDFYAVS-FVKDAQVVHELKNYLKSCGADIHVIVKIE--SA---D-SIPNLHSIITA-SDGAMVARGDL 350 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalS-fV~saedV~~lr~~l~~~~~~i~IIaKIE--t~---~-aveNldeIl~~-sDGImIaRGDL 350 (506)
..+++.++++|+|.|.+. .+...+.+....+++++.|..+..-.-.+ ++ + .++-++++.+. +|.|-++ |-
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~--DT 180 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALK--DM 180 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE--ET
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc--CC
Confidence 567888999999988765 34555677777777788777643222222 11 1 22223333333 6766663 32
Q ss_pred ccCCCCCcHHHHHHHHHHHHH-HcCCcEEEEehhhhhhhcCCCCChhhcccHHH---HHHhCcceeEee----ccccCCC
Q 010610 351 GAELPIEEVPLLQEEIIRTCR-SMGKAVIVATNMLESMIVHPTPTRAEVSDIAI---AVREGADAVMLS----GETAHGK 422 (506)
Q Consensus 351 gvelg~e~V~~~Qk~II~~c~-~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan---av~dG~D~vmLs----~ETA~G~ 422 (506)
.|. -.|..-.+++++.+ ..+.|+.+.|+ ...--| +|| |+..|+|.|=-| ||. .|+
T Consensus 181 ---~G~-~~P~~v~~lv~~l~~~~~~~i~~H~H--------nd~GlA----vAN~laAv~AGa~~VD~ti~g~ger-tGN 243 (464)
T 2nx9_A 181 ---AGI-LTPYAAEELVSTLKKQVDVELHLHCH--------STAGLA----DMTLLKAIEAGVDRVDTAISSMSGT-YGH 243 (464)
T ss_dssp ---TSC-CCHHHHHHHHHHHHHHCCSCEEEEEC--------CTTSCH----HHHHHHHHHTTCSEEEEBCGGGCST-TSC
T ss_pred ---CCC-cCHHHHHHHHHHHHHhcCCeEEEEEC--------CCCChH----HHHHHHHHHhCCCEEEEeccccCCC-CcC
Confidence 222 23444445554443 34889999874 222222 455 788899876432 454 677
Q ss_pred CHHHHHH
Q 010610 423 FPLKAVK 429 (506)
Q Consensus 423 yPveaV~ 429 (506)
=+.|.|-
T Consensus 244 ~~lE~lv 250 (464)
T 2nx9_A 244 PATESLV 250 (464)
T ss_dssp CBHHHHH
T ss_pred HHHHHHH
Confidence 7777664
No 459
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=29.59 E-value=3.8e+02 Score=27.94 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHcCCc---EEEEehhhhhhhcCCCCChhhcc----cHHHHHHhCcceeEeeccccC------CCCHH
Q 010610 359 VPLLQEEIIRTCRSMGKA---VIVATNMLESMIVHPTPTRAEVS----DIAIAVREGADAVMLSGETAH------GKFPL 425 (506)
Q Consensus 359 V~~~Qk~II~~c~~~GkP---vivATqmLeSMi~~~~PtRAEv~----Dvanav~dG~D~vmLs~ETA~------G~yPv 425 (506)
...+-..+...|++.+.| |++.-.-+.+..-...|...++. .+..++..|++.||+- .+. =.|+.
T Consensus 61 ~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD--~S~~~~~~~~pl~e 138 (420)
T 2fiq_A 61 PADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLD--ASMSCAGDPIPLAP 138 (420)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEEC--CCSCCBTCCSSCCH
T ss_pred HHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEEC--CCCCCCCCCCCccH
Confidence 455667777778899999 88876555554344455555543 4777999999999994 333 33555
Q ss_pred HHHHH-HHHHHHHHhc
Q 010610 426 KAVKV-MHTVSLRTEA 440 (506)
Q Consensus 426 eaV~~-m~~I~~~aE~ 440 (506)
..+.+ -+++++-++.
T Consensus 139 Ni~~~rt~elv~~Ah~ 154 (420)
T 2fiq_A 139 ETVAERAAVLCFAAES 154 (420)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 55332 3444444443
No 460
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=29.59 E-value=63 Score=33.58 Aligned_cols=52 Identities=27% Similarity=0.279 Sum_probs=32.8
Q ss_pred CCCHHHH-HHHHHhCCcEEEEeCCCC---------ChHHHHHHHHHHHHHHHhcCCceEEEEeecC
Q 010610 120 TNTREMI-WKLAEAGMNVARLNMSHG---------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (506)
Q Consensus 120 s~~~e~i-~~li~aGm~v~RiN~SHg---------~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~ 175 (506)
....+.| +.|.+.|+|++||-++.. +.+....+.+.|.. .++.| +.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~-a~~~G---i~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGW-YAERG---YKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHH-HHHTT---CEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHH-HHHCC---CEEEEEcc
Confidence 3467888 899999999999987621 12223333333333 34555 77888854
No 461
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=29.56 E-value=2.4e+02 Score=27.09 Aligned_cols=128 Identities=21% Similarity=0.194 Sum_probs=0.0
Q ss_pred CCCccCHHHh----HhhHhcCCcEE-----EEccCCCHHHHHHHHHHHHhcCCCceEEEecCCh-----------hhhhh
Q 010610 273 SITEKDWDDI----KFGVDNKVDFY-----AVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA-----------DSIPN 332 (506)
Q Consensus 273 ~ltekD~~dI----~~al~~gvD~I-----alSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~-----------~aveN 332 (506)
+|+.++.+++ +.+...|+|.| .+....+.+++.++-..+++.-.+.++|.-+=+. +-++-
T Consensus 25 pl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~l 104 (258)
T 4h3d_A 25 PIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTL 104 (258)
T ss_dssp EECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHH
Q ss_pred HHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhh-cccHHHHHHhCcce
Q 010610 333 LHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAE-VSDIAIAVREGADA 411 (506)
Q Consensus 333 ldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAE-v~Dvanav~dG~D~ 411 (506)
+.+++.....=+| ++-+..-....++++..+++.|..+|.+-+=++. +|...| ...+..+...|+|.
T Consensus 105 l~~~~~~~~~d~i-------DvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~-----TP~~~el~~~~~~~~~~gaDI 172 (258)
T 4h3d_A 105 NKEISNTGLVDLI-------DVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNK-----TPKKEEIVSRLCRMQELGADL 172 (258)
T ss_dssp HHHHHHTTCCSEE-------EEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSC-----CCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHhcCCchhh-------HHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCC-----CCCHHHHHHHHHHHHHhCCCE
Q ss_pred e
Q 010610 412 V 412 (506)
Q Consensus 412 v 412 (506)
+
T Consensus 173 v 173 (258)
T 4h3d_A 173 P 173 (258)
T ss_dssp E
T ss_pred E
No 462
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=29.41 E-value=93 Score=31.49 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=34.1
Q ss_pred HHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 126 IWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 126 i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
.+++.+.|.+.+.|+..|++.+.-.+.++.+|++ .| ..+.|++|.
T Consensus 173 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDa 217 (392)
T 1tzz_A 173 MRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEE---IG-KDAQLAVDA 217 (392)
T ss_dssp HHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHH---HT-TTCEEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---cC-CCCeEEEEC
Confidence 4667889999999999998887777777777765 34 345666775
No 463
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=29.40 E-value=47 Score=32.09 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=48.0
Q ss_pred HHhHhhHhcCCcEEEEccCCC-----H----HHHHHHHH----HHHhcCCCceEEEec---CChhhhhhHHHHHHhCCEE
Q 010610 280 DDIKFGVDNKVDFYAVSFVKD-----A----QVVHELKN----YLKSCGADIHVIVKI---ESADSIPNLHSIITASDGA 343 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~s-----a----edV~~lr~----~l~~~~~~i~IIaKI---Et~~aveNldeIl~~sDGI 343 (506)
++++.+.+.|++.+.++-..- + ++...+.+ +.++.+..+...+-| +-.+..+..-+.++. + =
T Consensus 15 ~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~-~-~ 92 (261)
T 3guw_A 15 SELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPDYEFVLGYLEE-G-E 92 (261)
T ss_dssp HHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGGGCCTTTHHHHHHHTT-S-C
T ss_pred HHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEECcccccccHHHHHHHhCc-C-C
Confidence 468888999999887765431 2 23333332 233322121111100 111122222233322 2 2
Q ss_pred EEcCCCcccCCCCCcHHHHHH----HHHHHHHHcCCcEEEEe
Q 010610 344 MVARGDLGAELPIEEVPLLQE----EIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 344 mIaRGDLgvelg~e~V~~~Qk----~II~~c~~~GkPvivAT 381 (506)
++|=|..|.+.. ...|+ +.++.|++.|+||++.+
T Consensus 93 vvaIGEiGLD~~----~~~Q~~~f~~ql~lA~e~~lPv~iH~ 130 (261)
T 3guw_A 93 WVAFGEIGLELV----TDEEIEVLKSQLELAKRMDVPCIIHT 130 (261)
T ss_dssp CSCEEEEECSSC----CHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEEEecCCCC----hHHHHHHHHHHHHHHHHhCCeEEEEc
Confidence 334355555543 24454 56778999999999986
No 464
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=29.36 E-value=1.2e+02 Score=30.63 Aligned_cols=87 Identities=8% Similarity=0.106 Sum_probs=58.1
Q ss_pred HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEcCCCcccCCCCCcHH
Q 010610 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPIEEVP 360 (506)
Q Consensus 283 ~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIaRGDLgvelg~e~V~ 360 (506)
+..-+.|+++|=-|+ .++|+..++++-+.. .++|++ =|+....+.+.++++. +|+|++.++-+|- +
T Consensus 211 ~~l~~~~i~~iEqP~--~~~~~~~~~~l~~~~--~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG-------i 278 (384)
T 2pgw_A 211 RKLEKYDIEFIEQPT--VSWSIPAMAHVREKV--GIPIVA-DQAAFTLYDVYEICRQRAADMICIGPREIGG-------I 278 (384)
T ss_dssp HHHGGGCCSEEECCS--CTTCHHHHHHHHHHC--SSCEEE-STTCCSHHHHHHHHHTTCCSEEEECHHHHTS-------H
T ss_pred HHHHhcCCCEEeCCC--ChhhHHHHHHHHhhC--CCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEcchhhCC-------H
Confidence 333457999998887 344555554443322 466554 5776677788888865 8999996544331 2
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 010610 361 LLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 361 ~~Qk~II~~c~~~GkPvivAT 381 (506)
.--.+++..|+++|.++.+.+
T Consensus 279 t~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 279 QPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHCCCeEeecc
Confidence 233578999999999998863
No 465
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=29.32 E-value=5.2e+02 Score=27.11 Aligned_cols=188 Identities=11% Similarity=0.026 Sum_probs=107.1
Q ss_pred CCCccCHHHh-HhhHhcCCcEEEEcc----CC-----CHHHHHHHHHHHHhcCCCceEEEec--CChhhhh---------
Q 010610 273 SITEKDWDDI-KFGVDNKVDFYAVSF----VK-----DAQVVHELKNYLKSCGADIHVIVKI--ESADSIP--------- 331 (506)
Q Consensus 273 ~ltekD~~dI-~~al~~gvD~IalSf----V~-----saedV~~lr~~l~~~~~~i~IIaKI--Et~~ave--------- 331 (506)
.++..|+..| +...+.|++.|=+.+ +. ++++.+.++.+-+. ..++.+.+-+ =+.-|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 4555665555 445568999987753 21 56666666655433 2344444333 2223332
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHH-HHHhCc
Q 010610 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAI-AVREGA 409 (506)
Q Consensus 332 NldeIl~~-sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvan-av~dG~ 409 (506)
+++..++. .|.|-|. ....++ .-.+..++.++++|+.|..+- ++...+.=+...+.+++. +...|+
T Consensus 105 ~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 33444444 5755542 122233 335678999999999986543 233333334555666666 567799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcCcCCChHHHHHHHHHHHHhhcCceEEEEcCCh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTG 485 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~Iiv~T~sG 485 (506)
|.|.|. +|+=+-.|-++-+.+..+.++.. .. +.-...++..-++| ...+|-+.||-+|=.|-.|
T Consensus 173 d~I~l~-DT~G~~~P~~v~~lv~~l~~~~~--~~-------i~~H~Hnd~GlAvA--N~laAv~AGa~~VD~ti~g 236 (464)
T 2nx9_A 173 DSIALK-DMAGILTPYAAEELVSTLKKQVD--VE-------LHLHCHSTAGLADM--TLLKAIEAGVDRVDTAISS 236 (464)
T ss_dssp SEEEEE-ETTSCCCHHHHHHHHHHHHHHCC--SC-------EEEEECCTTSCHHH--HHHHHHHTTCSEEEEBCGG
T ss_pred CEEEEc-CCCCCcCHHHHHHHHHHHHHhcC--Ce-------EEEEECCCCChHHH--HHHHHHHhCCCEEEEeccc
Confidence 999995 88888999999888888877652 11 11111122222333 3455666677655555554
No 466
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=29.27 E-value=2.8e+02 Score=26.56 Aligned_cols=99 Identities=5% Similarity=-0.122 Sum_probs=60.1
Q ss_pred HHhHhhHhcCCcEEEEccC---------CCHH-----HHHHHHHHHHhcCCCceEEE-ec--C------ChhhhhhHHHH
Q 010610 280 DDIKFGVDNKVDFYAVSFV---------KDAQ-----VVHELKNYLKSCGADIHVIV-KI--E------SADSIPNLHSI 336 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV---------~sae-----dV~~lr~~l~~~~~~i~IIa-KI--E------t~~aveNldeI 336 (506)
+.++.+.+.|.|+|=+... .+++ ++.++++.+++.|-.+..+- -. . ..+.++.+++.
T Consensus 40 ~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (305)
T 3obe_A 40 NGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKA 119 (305)
T ss_dssp HHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHH
Confidence 4567888999999987643 1233 88999999988776543221 11 1 02345666666
Q ss_pred HHh-----CCEEEEcCCCcccCC---CCCcHHHHHHHHHHHHHHcCCcEEEE
Q 010610 337 ITA-----SDGAMVARGDLGAEL---PIEEVPLLQEEIIRTCRSMGKAVIVA 380 (506)
Q Consensus 337 l~~-----sDGImIaRGDLgvel---g~e~V~~~Qk~II~~c~~~GkPvivA 380 (506)
++. ++.|.+. |. .... .++.+....+++...|.++|..+.+-
T Consensus 120 i~~A~~lG~~~v~~~-~~-~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 169 (305)
T 3obe_A 120 TDIHAELGVSCMVQP-SL-PRIENEDDAKVVSEIFNRAGEITKKAGILWGYH 169 (305)
T ss_dssp HHHHHHHTCSEEEEC-CC-CCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHcCCCEEEeC-CC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 655 5677764 31 1111 12244556678888899999887763
No 467
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=29.27 E-value=1.1e+02 Score=25.74 Aligned_cols=41 Identities=7% Similarity=0.081 Sum_probs=30.9
Q ss_pred HHHHHHHHhhcCc-eEEEEcC---------ChHHHHHHHhhCCCCeEEEEeC
Q 010610 464 AYHATMMSNTLGT-SIVVFTR---------TGFMAILLSHYRPSGTIFAFTN 505 (506)
Q Consensus 464 a~~av~~A~~~~a-~Iiv~T~---------sG~tA~~lS~~RP~~pIia~T~ 505 (506)
+...++.|.+.++ .||+-++ -|+++..+.+.- +|||+.+-+
T Consensus 109 ~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv~~ 159 (162)
T 1mjh_A 109 HEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVVKR 159 (162)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEEeC
Confidence 3344678888899 7777665 377899999986 499998854
No 468
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=29.07 E-value=2.1e+02 Score=27.97 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhcCCce---EEEEeec----------CCCeeEEeccC--CCeEecCCCEE---------------
Q 010610 147 ASHQKVIDLVKEYNAQSKDNV---IAIMLDT----------KGPEVRSGDLP--QPITLTSGQEF--------------- 196 (506)
Q Consensus 147 e~~~~~i~~ir~~~~~~~~~~---i~Il~DL----------~GPkIRtG~l~--~~i~Lk~G~~v--------------- 196 (506)
...++-+..+|+-.+++. .| ++.+++. .||+.|+.-.+ +.-.|++|+.|
T Consensus 78 k~ar~El~~LkeElerL~-sPPL~iGtvlev~dd~~aiV~s~Gr~~~V~Vsp~Vd~e~LkPG~rVaLNeSlaVVevLp~E 156 (251)
T 3m9b_A 78 KEARQQLLALREEVDRLG-QPPSGYGVLLATHDDDTVDVFTSGRKMRLTCSPNIDAASLKKGQTVRLNEALTVVEAGTFE 156 (251)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCCEEEEEEEEECSSSCEEEECSSSCCEECBCTTSCTTTSCSSCEEEECTTCCBCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHhc-CCCceEEEEEEEcCCCEEEEEeCCceEEEEeCCCCCHHHCCCCCEEEeCCccEEEEecCCC
Q ss_pred ----------------EEEEecCCCCceEEEeccchhhh-----------------hcCCCCEEEEe
Q 010610 197 ----------------TFTIQRGVGSAECVSVNYDDFVN-----------------DVEVGDMLLVD 230 (506)
Q Consensus 197 ----------------~lt~~~~~~~~~~i~v~~~~l~~-----------------~v~~Gd~IliD 230 (506)
++-.....+.+..+++..+-.-. .+++||.+++|
T Consensus 157 ~~Gev~tv~E~l~d~~R~lV~~~~~eerVv~lA~~L~~~~~~~~~~~~~~~~~~~~~lr~GDsllvD 223 (251)
T 3m9b_A 157 AVGEISTLREILADGHRALVVGHADEERVVWLADPLIAEDLPDGLPEALNDDTRPRKLRPGDSLLVD 223 (251)
T ss_dssp CCSEEEEEEEECTTSSEEEEECSSSCEEEEECCGGGTCSCCCCCCCSSSCCCCSCCCCCTTCEEEEC
T ss_pred CcccEEEEEEEecCCCEEEEecCCCceEEEEechhhhccccccccccccccccccCCCCCCCEEEEe
No 469
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=29.01 E-value=79 Score=27.47 Aligned_cols=51 Identities=8% Similarity=0.130 Sum_probs=36.7
Q ss_pred hhHHHHHH--hCCEEEEc--CCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 331 PNLHSIIT--ASDGAMVA--RGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 331 eNldeIl~--~sDGImIa--RGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
..+++.+. -.|.|+|. --|+.-..+.+++....+.+++.+++.|.++++.|
T Consensus 52 ~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 52 ARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 34444443 25766555 44887666777888888999999999998888765
No 470
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=28.96 E-value=1.9e+02 Score=29.28 Aligned_cols=93 Identities=23% Similarity=0.306 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh-CCEEEEcC-CCcccCCCCCcHHHHHHHHHHHHHHcCCcEE
Q 010610 301 AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVAR-GDLGAELPIEEVPLLQEEIIRTCRSMGKAVI 378 (506)
Q Consensus 301 aedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDGImIaR-GDLgvelg~e~V~~~Qk~II~~c~~~GkPvi 378 (506)
.+.++++++.. +++|+.|. ....+......+. +|+|.|+- |.-..+.+...+ ...+++ ....+.|||
T Consensus 214 ~~~i~~i~~~~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~-~~l~~v---~~~~~~pVi 282 (380)
T 1p4c_A 214 WEALRWLRDLW-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPM-EVLAQS---VAKTGKPVL 282 (380)
T ss_dssp HHHHHHHHHHC-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGG-GTHHHH---HHHHCSCEE
T ss_pred HHHHHHHHHhc-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHH-HHHHHH---HHHcCCeEE
Confidence 45666666543 46777772 1223333333333 79999841 110111122211 111222 233466988
Q ss_pred EEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 379 VATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 379 vATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
....+ - -..|+..++..|+|++|+..
T Consensus 283 a~GGI---------~---~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 283 IDSGF---------R---RGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp ECSSC---------C---SHHHHHHHHHTTCSCEEESH
T ss_pred EECCC---------C---CHHHHHHHHHhCCcHhhehH
Confidence 65421 1 23589999999999999864
No 471
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=28.96 E-value=1.3e+02 Score=28.84 Aligned_cols=58 Identities=14% Similarity=0.203 Sum_probs=41.7
Q ss_pred EecCCCEEEEEEec--CC---CCceEEEeccchhhhh---cCCCCEEEEeCCeEEEEEEEEeCCeEEE
Q 010610 189 TLTSGQEFTFTIQR--GV---GSAECVSVNYDDFVND---VEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (506)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~---~~~~~i~v~~~~l~~~---v~~Gd~IliDDG~i~l~V~~~~~~~v~~ 248 (506)
-++.|++.+|+... .. +.+....++...|... +++|+.+.+++ . ...|++++++.|..
T Consensus 63 Gm~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~-~-~g~V~~v~~~~V~v 128 (231)
T 3prb_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (231)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecC-C-CEEEEEEcCCEEEE
Confidence 47899999998863 22 3445667777777753 67799999864 4 46888888887654
No 472
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=28.95 E-value=1.9e+02 Score=29.01 Aligned_cols=92 Identities=8% Similarity=0.014 Sum_probs=0.0
Q ss_pred HHHhHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEcCCCcccCCCC
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAELPI 356 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIaRGDLgvelg~ 356 (506)
.+.++..-+.|+ ||=-|+- +.+...++++.+ .++|++= |+....+.+.++++. +|+|++.++-.|-
T Consensus 206 ~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~-----~iPI~~d-e~i~~~~~~~~~i~~~~~d~v~ik~~~~GG---- 273 (379)
T 2rdx_A 206 IRLARATRDLDY-ILEQPCR-SYEECQQVRRVA-----DQPMKLD-ECVTGLHMAQRIVADRGAEICCLKISNLGG---- 273 (379)
T ss_dssp HHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTC-----CSCEEEC-TTCCSHHHHHHHHHHTCCSEEEEETTTTTS----
T ss_pred HHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhC-----CCCEEEe-CCcCCHHHHHHHHHcCCCCEEEEeccccCC----
Q ss_pred CcHHHHHHHHHHHHHHcCCcEEEEehhhhh
Q 010610 357 EEVPLLQEEIIRTCRSMGKAVIVATNMLES 386 (506)
Q Consensus 357 e~V~~~Qk~II~~c~~~GkPvivATqmLeS 386 (506)
..--.+++..|+++|.++.+.+ |+||
T Consensus 274 ---it~~~~i~~~A~~~g~~~~~~~-~~es 299 (379)
T 2rdx_A 274 ---LSKARRTRDFLIDNRMPVVAED-SWGG 299 (379)
T ss_dssp ---HHHHHHHHHHHHHTTCCEEEEC-SBCS
T ss_pred ---HHHHHHHHHHHHHcCCeEEEee-ccCc
No 473
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=28.88 E-value=63 Score=31.95 Aligned_cols=52 Identities=17% Similarity=0.177 Sum_probs=33.6
Q ss_pred CCHHHHHHHH-HhCCcEEEEeCCCCC------hHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 121 NTREMIWKLA-EAGMNVARLNMSHGD------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 121 ~~~e~i~~li-~aGm~v~RiN~SHg~------~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
.+.+.++.|. +.|+|++|+-+.+.. ++. .+.++.+=+...+.| +.+++|+-+
T Consensus 69 ~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~-~~~ld~~v~~a~~~G---i~VilD~H~ 127 (327)
T 3pzt_A 69 VNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSV-KNKVKEAVEAAKELG---IYVIIDWHI 127 (327)
T ss_dssp CSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGG-HHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHH-HHHHHHHHHHHHHCC---CEEEEEecc
Confidence 4577889886 689999999776432 222 334444444455666 677888754
No 474
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.78 E-value=35 Score=31.61 Aligned_cols=150 Identities=10% Similarity=0.041 Sum_probs=85.9
Q ss_pred HHhHhhHhcCCcEEEEccCC-CHHHHHHHHHHHHhcCCCceEEE---ecCC------hhhhhhHHHHHHh-----CCEEE
Q 010610 280 DDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV---KIES------ADSIPNLHSIITA-----SDGAM 344 (506)
Q Consensus 280 ~dI~~al~~gvD~IalSfV~-saedV~~lr~~l~~~~~~i~IIa---KIEt------~~aveNldeIl~~-----sDGIm 344 (506)
+.++.+.+.|+|+|=+..-. +..++.++++.+++.|-.+..+. .+-+ .++++.+...++. ++.|.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 45678889999999886521 35678889999998876544332 2222 2345666666665 56777
Q ss_pred EcCCCccc-CCC----CCcHHHHHHHHHHHHHHcCCcEEEEeh-hhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccc
Q 010610 345 VARGDLGA-ELP----IEEVPLLQEEIIRTCRSMGKAVIVATN-MLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418 (506)
Q Consensus 345 IaRGDLgv-elg----~e~V~~~Qk~II~~c~~~GkPvivATq-mLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ET 418 (506)
+..|...- +.+ ++.+...-+++...|.++|..+.+=+. -.+..-.+...|-.++.++...+.. .+-+.-+|
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~vg~~~D~ 178 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICETLGP---GVGVAIDV 178 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHHHCT---TEEEEEEH
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHHhCc---ccEEEEEh
Confidence 77664421 111 224556667888889999988775431 0000011234455565555555532 22222222
Q ss_pred c---CCCCHHHHHHHHH
Q 010610 419 A---HGKFPLKAVKVMH 432 (506)
Q Consensus 419 A---~G~yPveaV~~m~ 432 (506)
. .|..|.+.++.+.
T Consensus 179 ~h~~~~~d~~~~l~~~~ 195 (275)
T 3qc0_A 179 YHVWWDPDLANQIARAG 195 (275)
T ss_dssp HHHTTCTTHHHHHHHHH
T ss_pred hhheeCCCHHHHHHHcC
Confidence 2 2456777766554
No 475
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=28.77 E-value=1.1e+02 Score=29.94 Aligned_cols=50 Identities=22% Similarity=0.236 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCcEEEEe-CCCCC----------h-HHHHHHHHHHHHHHHhcCCceEEEEeecC
Q 010610 123 REMIWKLAEAGMNVARLN-MSHGD----------H-ASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (506)
Q Consensus 123 ~e~i~~li~aGm~v~RiN-~SHg~----------~-e~~~~~i~~ir~~~~~~~~~~i~Il~DL~ 175 (506)
.+.|+.|-+.|+|++|+- |+++. . +...+.++.+=+..++.| +.+++||-
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~G---i~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYG---IHLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 557888999999999996 44431 1 222334444444455666 77777764
No 476
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=28.72 E-value=63 Score=31.47 Aligned_cols=73 Identities=21% Similarity=0.173 Sum_probs=47.8
Q ss_pred HhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCCCceEE-EecCChhhhh--------hHHHHHHh-CCEEEEcCCCccc
Q 010610 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVI-VKIESADSIP--------NLHSIITA-SDGAMVARGDLGA 352 (506)
Q Consensus 283 ~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~~i~II-aKIEt~~ave--------NldeIl~~-sDGImIaRGDLgv 352 (506)
+.+.+.|+|++.+| +.++..+|+.+ +.+..++ .=|- +++-+ +..+.++. +|.+.+||+=++.
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~---g~~fl~VtPGIr-~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHL---GREFKLVTPGIR-PAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHH---CTTSEEEEECCC-CTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhc---CCCcEEEeCCcc-cCcCCccceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 34567899999766 78899998876 4555544 5553 23332 46677766 9999999987766
Q ss_pred CCCCCcHHHHH
Q 010610 353 ELPIEEVPLLQ 363 (506)
Q Consensus 353 elg~e~V~~~Q 363 (506)
+=|.+.+..+.
T Consensus 241 ~dp~~a~~~i~ 251 (255)
T 3ldv_A 241 AHPEVVLEEIN 251 (255)
T ss_dssp SCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 54444443333
No 477
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=28.38 E-value=1e+02 Score=30.91 Aligned_cols=106 Identities=11% Similarity=0.095 Sum_probs=64.6
Q ss_pred ccCHHH-hHhhHhcCCcEEEEccCCCHHHHHHHHHHHHhcCC--CceEEEec-------CC--hh-hhhhHHHHHHhCCE
Q 010610 276 EKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKI-------ES--AD-SIPNLHSIITASDG 342 (506)
Q Consensus 276 ekD~~d-I~~al~~gvD~IalSfV~saedV~~lr~~l~~~~~--~i~IIaKI-------Et--~~-aveNldeIl~~sDG 342 (506)
+.|.++ |+.|.+.|++.++++-+ +.++...+.++.++... .+.+.+-+ .. .+ .++.|.++++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 456654 56888999998887765 68888888777765431 01233221 11 11 45666666655432
Q ss_pred EEEcCCCcccCCCC-C-cHHHHHH----HHHHHHHH-cCCcEEEEeh
Q 010610 343 AMVARGDLGAELPI-E-EVPLLQE----EIIRTCRS-MGKAVIVATN 382 (506)
Q Consensus 343 ImIaRGDLgvelg~-e-~V~~~Qk----~II~~c~~-~GkPvivATq 382 (506)
=++|=|..|.+.-. . .-...|+ +-++.|++ .++||++.+.
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r 176 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCR 176 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 33455677766643 1 1235564 44677999 9999999863
No 478
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=28.30 E-value=1.7e+02 Score=28.83 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=52.8
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH-HHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++ -..|||.-+ ...+-.|.-+.+ .|-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGv---------g~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 40 RYQLENGVNALIVL-GTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGA---------GTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcC---------CCccHHHHHHHHHHHHhcCC
Confidence 334444 7999985 211 122333343344444444433 247888765 233344544444 4666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 109 NGVLVVTPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999987443333345667778888876553
No 479
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=28.25 E-value=80 Score=24.58 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=24.2
Q ss_pred CCCCEEEEeCCeEEEEEEEEeCCeEEEEEe
Q 010610 222 EVGDMLLVDGGMMSLLVKSKTEDSVKCEVV 251 (506)
Q Consensus 222 ~~Gd~IliDDG~i~l~V~~~~~~~v~~~V~ 251 (506)
++|..|.|+| .|..+|.++.++.|+.-+.
T Consensus 9 k~GE~I~Igd-~I~I~Vl~i~g~~VrlGI~ 37 (63)
T 2bti_A 9 RVGETLMIGD-EVTVTVLGVKGNQVRIGVN 37 (63)
T ss_dssp ETTCEEEETT-TEEEEEEEEETTEEEEEEE
T ss_pred cCCCeEEeCC-CEEEEEEEEeCCEEEEEEE
Confidence 7899999987 7999999999988876443
No 480
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=28.24 E-value=2e+02 Score=26.51 Aligned_cols=30 Identities=10% Similarity=0.242 Sum_probs=19.2
Q ss_pred CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 340 SDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 340 sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
+|||++.+.+.. . ..+..+++.|+|+++..
T Consensus 67 vdgiIi~~~~~~------~------~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 67 ADGVIISKIEPN------D------PRVRFMTERNMPFVTHG 96 (288)
T ss_dssp CSEEEEESCCTT------C------HHHHHHHHTTCCEEEES
T ss_pred ccEEEEecCCCC------c------HHHHHHhhCCCCEEEEC
Confidence 789888653321 1 24566777899988654
No 481
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=28.21 E-value=54 Score=33.09 Aligned_cols=50 Identities=24% Similarity=0.351 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCcEEEEeCCCCC---hHHHHHHHHHHHHHHHhcCCceEEEEeecCCC
Q 010610 124 EMIWKLAEAGMNVARLNMSHGD---HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (506)
Q Consensus 124 e~i~~li~aGm~v~RiN~SHg~---~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~GP 177 (506)
+.|+.|.+.|+|++|+-++-+. .+. .+.++.+=+...+.| +.+++|+-+.
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~-l~~ld~~v~~a~~~G---iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDD-IDTVREVIELAEQNK---MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCC-HHHHHHHHHHHHTTT---CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHH-HHHHHHHHHHHHHCC---CEEEEEeccC
Confidence 5788999999999999886432 222 223333333344555 7788998765
No 482
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=28.02 E-value=76 Score=31.11 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=39.8
Q ss_pred ceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEe
Q 010610 318 IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVAT 381 (506)
Q Consensus 318 i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivAT 381 (506)
.++|+. +.+-++++++.+|++.|+.|=|. ++........++.+++.++|+++=-
T Consensus 42 sP~M~~-----~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlDP 95 (273)
T 3dzv_A 42 KPIMAD-----DPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVDL 95 (273)
T ss_dssp EEECCC-----CGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred chhhcC-----CHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEch
Confidence 356652 35678888899999999987642 3445566777788999999998753
No 483
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=27.99 E-value=1.1e+02 Score=30.69 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=40.1
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 109 KTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
+....+|+|- .++| ..+++.++|.+.+.+++.|++.+.-.+.++.+|+ ..| ..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~---a~g-~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA---GLP-DGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH---SCC-TTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH---HhC-CCCEEEEeC
Confidence 4556678764 2443 3456788999999999999877666666666664 344 335566664
No 484
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=27.94 E-value=2.8e+02 Score=26.69 Aligned_cols=52 Identities=12% Similarity=-0.002 Sum_probs=31.9
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEeC--C--------CCChHHHHHHHHHHHHHHHhcC
Q 010610 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNM--S--------HGDHASHQKVIDLVKEYNAQSK 164 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e~i~~li~aGm~v~RiN~--S--------Hg~~e~~~~~i~~ir~~~~~~~ 164 (506)
.+++.+=+ | +.+.+++.+++|++.+++-+ | +-+.++..+.+..+-++.++.|
T Consensus 72 ~~~v~~l~-~---n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G 133 (295)
T 1ydn_A 72 GVRYSVLV-P---NMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDG 133 (295)
T ss_dssp SSEEEEEC-S---SHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEe-C---CHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC
Confidence 45564433 3 58999999999999999974 3 4555544444333333344444
No 485
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=27.86 E-value=79 Score=25.36 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=25.1
Q ss_pred hcCCCCEEEEeCCeEEEEEEEEeCCeEEEEE
Q 010610 220 DVEVGDMLLVDGGMMSLLVKSKTEDSVKCEV 250 (506)
Q Consensus 220 ~v~~Gd~IliDDG~i~l~V~~~~~~~v~~~V 250 (506)
.=++|..|.|.| .|.++|.++.++.|+.-+
T Consensus 17 tRK~GEsI~IGd-dI~ItVl~i~g~qVrLGI 46 (73)
T 1vpz_A 17 TRRVGETLMVGD-DVTVTVLGVKGNQVRIGV 46 (73)
T ss_dssp EEETTCEEEETT-TEEEEEEEEETTEEEEEE
T ss_pred EccCCCEEEeCC-CEEEEEEEEeCCEEEEEE
Confidence 348899999988 899999999999877643
No 486
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=27.86 E-value=77 Score=25.46 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=24.3
Q ss_pred CCeEecCCCEEEEEEecCCCCceEEEeccchhhhhcCCCC
Q 010610 186 QPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGD 225 (506)
Q Consensus 186 ~~i~Lk~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd 225 (506)
..+.+++|++|+|...+.......+.+....+-..+.+|.
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~~~~~pg~ 67 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVESGK 67 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTEEEEECTTC
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCcceeecCCc
Confidence 4699999999999765332233455554444444445554
No 487
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=27.86 E-value=3.1e+02 Score=26.97 Aligned_cols=87 Identities=9% Similarity=0.172 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHhCCEEEEcCCCcccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehh
Q 010610 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNM 383 (506)
Q Consensus 304 V~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~~~GkPvivATqm 383 (506)
++.++++.++. .+.+++-+-++..++-+.+ .+|.+-||-+++- ..+ +++++.+.||||++.|.|
T Consensus 78 l~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~G~ 141 (292)
T 1o60_A 78 LKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKKPQ 141 (292)
T ss_dssp HHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeCCC
Confidence 44556665543 4678888888777766655 5799999865542 232 666666899999998755
Q ss_pred hhhhhcCCCCChhhcccHHHHHH-hCcceeEe
Q 010610 384 LESMIVHPTPTRAEVSDIAIAVR-EGADAVML 414 (506)
Q Consensus 384 LeSMi~~~~PtRAEv~Dvanav~-dG~D~vmL 414 (506)
- -|-.|+...+..+. .|.+-++|
T Consensus 142 ~--------~t~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 142 F--------LSPSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 3 14457666666655 46644444
No 488
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=27.84 E-value=1.8e+02 Score=28.50 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=53.8
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH-HHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+..++.++. ..|||.-+ ...+-.|.-+.+ .|-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGA---------GSNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcc---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 7999875 221 1223333444444444444432 47888765 233444544444 4666799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996443333335677888888887664
No 489
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=27.80 E-value=99 Score=25.65 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=28.8
Q ss_pred HHHHHHHhhcCc-eEEEEcCC--------hHHHHHHHhhCCCCeEEEEeC
Q 010610 465 YHATMMSNTLGT-SIVVFTRT--------GFMAILLSHYRPSGTIFAFTN 505 (506)
Q Consensus 465 ~~av~~A~~~~a-~Iiv~T~s--------G~tA~~lS~~RP~~pIia~T~ 505 (506)
...++.|.+.++ .||+-++. |.++..+.+.-| |||+.+-+
T Consensus 99 ~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~ 147 (150)
T 3tnj_A 99 EEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRL 147 (150)
T ss_dssp HHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeC
Confidence 344678888899 77765542 567888888776 99998754
No 490
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=27.77 E-value=2e+02 Score=29.74 Aligned_cols=115 Identities=11% Similarity=0.000 Sum_probs=65.8
Q ss_pred HHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHHHHhccccC
Q 010610 365 EIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG 444 (506)
Q Consensus 365 ~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~~aE~~~~~ 444 (506)
-+...|+..|.++.+.- |..+....+...-..|++.+...+ .| -++++...+++.+-...++.
T Consensus 174 avA~~aa~~G~~~~Ivm-----------p~~~~~~k~~~~r~~GA~Vv~v~~-----~~-~~a~~~a~~~a~~~~~~~~i 236 (442)
T 3ss7_X 174 SIGIMSARIGFKVTVHM-----------SADARAWKKAKLRSHGVTVVEYEQ-----DY-GVAVEEGRKAAQSDPNCFFI 236 (442)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEESS-----CH-HHHHHHHHHHHHTCTTEEEC
T ss_pred HHHHHHHHhCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECC-----CH-HHHHHHHHHHHHhCCCceeC
Confidence 45667999999998762 222222346667778998766542 34 57777666654332211111
Q ss_pred CCCCCCCCcCcCCC--hHHHHHHHHHHHHhhcC----------c-eEEEEcCChHHHHHHHh-----hCCCCeEEEEeC
Q 010610 445 GAMPPNLGQAFKNH--MSEMFAYHATMMSNTLG----------T-SIVVFTRTGFMAILLSH-----YRPSGTIFAFTN 505 (506)
Q Consensus 445 ~~~~~~~~~~~~~~--~~~~ia~~av~~A~~~~----------a-~Iiv~T~sG~tA~~lS~-----~RP~~pIia~T~ 505 (506)
. + .++ ...-....+.++.++++ . .|++.+-+|.++--+++ +.|.+.|+++-+
T Consensus 237 ~-------~--~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep 306 (442)
T 3ss7_X 237 D-------D--ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEP 306 (442)
T ss_dssp C-------T--TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred C-------C--CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 1 0 111 22222333445555442 1 67888888887665543 378899999854
No 491
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=27.75 E-value=2e+02 Score=27.18 Aligned_cols=150 Identities=13% Similarity=-0.042 Sum_probs=80.5
Q ss_pred cCHHHhHhhHhcCCcEEEEccC----CCHHHHHHHHHHHHhcCCCceEEEe------cCC------hhhhhhHHHHHHh-
Q 010610 277 KDWDDIKFGVDNKVDFYAVSFV----KDAQVVHELKNYLKSCGADIHVIVK------IES------ADSIPNLHSIITA- 339 (506)
Q Consensus 277 kD~~dI~~al~~gvD~IalSfV----~saedV~~lr~~l~~~~~~i~IIaK------IEt------~~aveNldeIl~~- 339 (506)
.+.++++++.+.|+|+|=+..- ...+++.++++.+++.|-.+...+- +-+ .++++.+...++.
T Consensus 37 ~~l~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 116 (309)
T 2hk0_A 37 KFGPYIEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNV 116 (309)
T ss_dssp CSHHHHHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3544488889999999988643 2227899999999887765444321 111 2345566666654
Q ss_pred ----CCEEEEcC----CCcccCC-C----CCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHH
Q 010610 340 ----SDGAMVAR----GDLGAEL-P----IEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVR 406 (506)
Q Consensus 340 ----sDGImIaR----GDLgvel-g----~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~ 406 (506)
++.|.+-. |.+.-+. . ++.+...-+++...|.+.|..+.+=+. ...-.+...|..++.++...+.
T Consensus 117 ~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~--~~~~~~~~~~~~~~~~l~~~v~ 194 (309)
T 2hk0_A 117 AKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVL--NRFENHVLNTAAEGVAFVKDVG 194 (309)
T ss_dssp HHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC--CTTTCSSCCSHHHHHHHHHHHT
T ss_pred HHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeec--ccccccccCCHHHHHHHHHHcC
Confidence 45555322 3321111 1 123455557778888889987665321 0001223345555555554442
Q ss_pred hCcceeEeecccc----CCCCHHHHHHH
Q 010610 407 EGADAVMLSGETA----HGKFPLKAVKV 430 (506)
Q Consensus 407 dG~D~vmLs~ETA----~G~yPveaV~~ 430 (506)
.+.+-+.-+|. .|..|.+.++.
T Consensus 195 --~~~vg~~~D~~H~~~~g~d~~~~l~~ 220 (309)
T 2hk0_A 195 --KNNVKVMLDTFHMNIEEDSFGDAIRT 220 (309)
T ss_dssp --CTTEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred --CCCeEEEEehhhHhhcCcCHHHHHHH
Confidence 23333333432 25556666553
No 492
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=27.74 E-value=1.7e+02 Score=28.54 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=54.2
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCcHHHHHHHHHHHHHHcCCcEEEEehhhhhhhcCCCCChhhcccHH-HHHHhCc
Q 010610 334 HSIITA-SDGAMVARGDL--GAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIA-IAVREGA 409 (506)
Q Consensus 334 deIl~~-sDGImIaRGDL--gvelg~e~V~~~Qk~II~~c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dva-nav~dG~ 409 (506)
+-.++. +||+++. |-- +..+..++-..+.+.+++.++ -..||+.-+- ..+-.|.-+.+ .|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 28 EWQIEEGSFGLVPC-GTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAGAG---------SNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHTTCSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC---------CSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CccHHHHHHHHHHHHHcCC
Confidence 334444 7999874 211 122333343344444444433 2478887652 33334544444 4667799
Q ss_pred ceeEeeccccCCCCHHHHHHHHHHHHHHHh
Q 010610 410 DAVMLSGETAHGKFPLKAVKVMHTVSLRTE 439 (506)
Q Consensus 410 D~vmLs~ETA~G~yPveaV~~m~~I~~~aE 439 (506)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999997543333345677888888887664
No 493
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=27.71 E-value=97 Score=31.36 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=39.6
Q ss_pred hHhhHhcCCcEEEEccC-------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEcCCCcc
Q 010610 282 IKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLG 351 (506)
Q Consensus 282 I~~al~~gvD~IalSfV-------~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIaRGDLg 351 (506)
++...+.|+|+|.++-= ...+-+.++++.+ +++||+- ... ..++.+++++. +|+|++||+=|+
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-----~iPvi~~-Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-----HGVIIGA-GAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-----CSEEEEE-SSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-----CCCEEEE-CCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 34455789999999741 1223344444433 4566652 222 35677888876 899999998665
No 494
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=27.65 E-value=1e+02 Score=31.10 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=40.4
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEeCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeec
Q 010610 109 KTKIVCTIGPSTNTRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174 (506)
Q Consensus 109 ~tKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~Il~DL 174 (506)
+....+|+|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.||+ ..| ..+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G-~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVP-AGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSC-TTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhC-CCCeEEEEC
Confidence 4456666654222443 4466788999999999999887766666666664 444 445666665
No 495
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=27.52 E-value=72 Score=31.12 Aligned_cols=53 Identities=23% Similarity=0.213 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHhCCcEEEEeCCCC---C---h----HHHHHHHHHHHHHHHhcCCceEEEEeecC
Q 010610 120 TNTREMIWKLAEAGMNVARLNMSHG---D---H----ASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (506)
Q Consensus 120 s~~~e~i~~li~aGm~v~RiN~SHg---~---~----e~~~~~i~~ir~~~~~~~~~~i~Il~DL~ 175 (506)
....+.++.|.+.|+|++||-++.. . + +...+.++.+=+...+.| +.+++|+-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~G---i~vildlh 98 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYG---IHICISLH 98 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHT---CEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcC---CEEEEEec
Confidence 3568899999999999999976421 1 1 122233333333344555 67888863
No 496
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=27.41 E-value=2.1e+02 Score=26.44 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=58.6
Q ss_pred HHHhHhhHhcCCcEEEEccCCC----------HHHHHHHHHHHHhcCC-CceEEEe----cC-----ChhhhhhHHHHHH
Q 010610 279 WDDIKFGVDNKVDFYAVSFVKD----------AQVVHELKNYLKSCGA-DIHVIVK----IE-----SADSIPNLHSIIT 338 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~s----------aedV~~lr~~l~~~~~-~i~IIaK----IE-----t~~aveNldeIl~ 338 (506)
.+.++++.+.|+|+|-+ |..+ .+++.++++.+++.|- .+.+.+- +- ...+++.+...++
T Consensus 17 ~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~ 95 (270)
T 3aam_A 17 AGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADDLE 95 (270)
T ss_dssp HHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHH
Confidence 34568888999999988 6543 5789999999988776 4333321 10 1224555555554
Q ss_pred h-----CCEEEEcCCCcccCCCCCcHHHHHHHHHHHHH-HcCCcEE
Q 010610 339 A-----SDGAMVARGDLGAELPIEEVPLLQEEIIRTCR-SMGKAVI 378 (506)
Q Consensus 339 ~-----sDGImIaRGDLgvelg~e~V~~~Qk~II~~c~-~~GkPvi 378 (506)
. ++.+.+-+|.. +.+.+....+++...+. +.|..+.
T Consensus 96 ~a~~lGa~~vv~h~g~~----~~~~~~~~l~~l~~~a~~~~gv~l~ 137 (270)
T 3aam_A 96 KAALLGVEYVVVHPGSG----RPERVKEGALKALRLAGVRSRPVLL 137 (270)
T ss_dssp HHHHHTCCEEEECCCBS----CHHHHHHHHHHHHHHHTCCSSSEEE
T ss_pred HHHHcCCCEEEECCCCC----CHHHHHHHHHHHHHhhcccCCCEEE
Confidence 4 56777766654 22445555566666665 5665544
No 497
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=27.16 E-value=1.6e+02 Score=31.13 Aligned_cols=124 Identities=19% Similarity=0.120 Sum_probs=76.4
Q ss_pred cCHHHhHhhHhcCCcE--EEEccCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh--CCEEEEcCCCccc
Q 010610 277 KDWDDIKFGVDNKVDF--YAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGA 352 (506)
Q Consensus 277 kD~~dI~~al~~gvD~--IalSfV~saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDGImIaRGDLgv 352 (506)
+|.+.++.|++.++|. +..|. +.+..+++-....+.+. .++++=...+.+..+-+++.. .+-|++.+|==
T Consensus 163 ~dpevleaALea~a~~~plI~sa--t~dn~e~m~~lAa~y~~--pVi~~~~dl~~lkelv~~a~~~GI~~IvLDPG~~-- 236 (446)
T 4djd_C 163 DDPDVLKEALAGVADRKPLLYAA--TGANYEAMTALAKENNC--PLAVYGNGLEELAELVDKIVALGHKQLVLDPGAR-- 236 (446)
T ss_dssp SCHHHHHHHHGGGGGGCCEEEEE--CTTTHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHTTCCCEEEECCCC--
T ss_pred CCHHHHHHHHHhhcCcCCeeEec--chhhHHHHHHHHHHcCC--cEEEEeccHHHHHHHHHHHHHCCCCcEEECCCch--
Confidence 6889999999888773 33332 24566666666655544 455543344444444444443 35667776642
Q ss_pred CCCCCcHHHHHHHHHHH-----HHHcCCcEEEEehhhhhhhcCCCCChhhcccHHHHHHhCcceeEeec
Q 010610 353 ELPIEEVPLLQEEIIRT-----CRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416 (506)
Q Consensus 353 elg~e~V~~~Qk~II~~-----c~~~GkPvivATqmLeSMi~~~~PtRAEv~Dvanav~dG~D~vmLs~ 416 (506)
|+.+....+.+|=+. =+..|-|+++.|- ....|-|.+-.+-++..|+|.+.+..
T Consensus 237 --g~~~t~~~~~~iRr~AL~~~d~~LgyPvi~~~s--------r~d~~~E~t~A~~~i~kga~Iv~vhd 295 (446)
T 4djd_C 237 --ETSRAIADFTQIRRLAIKKRFRSFGYPIIALTT--------AANPLDEVLQAVNYVTKYASLVVLRT 295 (446)
T ss_dssp --SHHHHHHHHHHHHHHHHHSCCGGGCSCBEEECC--------CSSHHHHHHHHHHHHHTTCSEEEESC
T ss_pred --hHHHHHHHHHHHHHHhhhccCcccCCCEEeccC--------CccHHHHHHHHHHHHHcCCeEEEEcC
Confidence 334444444455222 2458999998872 13467777777889999999999963
No 498
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=27.14 E-value=68 Score=31.38 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=26.3
Q ss_pred cHHHHHHhCcceeEeeccccCCCCHHHHHHHHHHHHH
Q 010610 400 DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436 (506)
Q Consensus 400 Dvanav~dG~D~vmLs~ETA~G~yPveaV~~m~~I~~ 436 (506)
|+..+...|+|++++..---....|.++++.+.+.+.
T Consensus 223 d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~ 259 (305)
T 2nv1_A 223 DAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATT 259 (305)
T ss_dssp HHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHH
Confidence 5777778899999987554444568777777666543
No 499
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=27.05 E-value=78 Score=32.27 Aligned_cols=62 Identities=15% Similarity=0.163 Sum_probs=37.0
Q ss_pred HHHhHhhHhcCCcEEEEccCC---------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhhHHHHHHh----CCEEEE
Q 010610 279 WDDIKFGVDNKVDFYAVSFVK---------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMV 345 (506)
Q Consensus 279 ~~dI~~al~~gvD~IalSfV~---------saedV~~lr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDGImI 345 (506)
.++++.+.+.|+|+|.++--- +.+-+.++++.+ + .+||+- -||.+-+++.+. +|++|+
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~---~--~pVia~----GGI~~~~dv~kal~~GAdaV~i 306 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT---G--KPVLID----SGFRRGSDIVKALALGAEAVLL 306 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH---C--SCEEEC----SSCCSHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc---C--CeEEEE----CCCCCHHHHHHHHHhCCcHhhe
Confidence 467888899999999996321 133445555444 2 256551 234334443333 789999
Q ss_pred cCCC
Q 010610 346 ARGD 349 (506)
Q Consensus 346 aRGD 349 (506)
||.=
T Consensus 307 Gr~~ 310 (380)
T 1p4c_A 307 GRAT 310 (380)
T ss_dssp SHHH
T ss_pred hHHH
Confidence 8753
No 500
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.00 E-value=78 Score=30.34 Aligned_cols=49 Identities=18% Similarity=0.270 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCcEEEEeCCCCC---hHHHHHHHHHHHHHHHhcCCceEEEEeecCC
Q 010610 124 EMIWKLAEAGMNVARLNMSHGD---HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (506)
Q Consensus 124 e~i~~li~aGm~v~RiN~SHg~---~e~~~~~i~~ir~~~~~~~~~~i~Il~DL~G 176 (506)
+.++.|-+.|+|++|+-++.+. .... +.++.+=+...+.| +.+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~-~~ld~~v~~a~~~G---i~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGP-SDVANVISLCKQNR---LICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCH-HHHHHHHHHHHHTT---CEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCH-HHHHHHHHHHHHCC---CEEEEEecc
Confidence 6788899999999999886541 1111 12222223334455 778888754
Done!