Query 010612
Match_columns 506
No_of_seqs 173 out of 1929
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 10:32:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010612.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010612hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 3.2E-78 1.1E-82 597.1 35.9 460 30-502 5-479 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 3.6E-77 1.2E-81 591.1 39.2 457 31-499 4-479 (494)
3 3pm0_A Cypib1, cytochrome P450 100.0 4E-77 1.4E-81 593.5 33.5 460 30-501 4-486 (507)
4 3k9v_A 1,25-dihydroxyvitamin D 100.0 2.6E-76 8.8E-81 584.0 34.7 454 29-498 18-482 (482)
5 1po5_A Cytochrome P450 2B4; ox 100.0 9.7E-76 3.3E-80 577.5 37.9 453 31-502 6-476 (476)
6 2fdv_A Cytochrome P450 2A6; CY 100.0 4.1E-76 1.4E-80 580.2 34.4 456 31-502 6-476 (476)
7 1r9o_A Cytochrome P450 2C9; mo 100.0 1.8E-75 6.3E-80 576.0 37.6 456 31-501 7-476 (477)
8 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.1E-75 3.9E-80 578.2 35.6 455 31-502 6-475 (476)
9 3nxu_A Cytochrome P450 3A4; al 100.0 2.7E-77 9.4E-82 591.0 23.8 449 31-500 10-476 (485)
10 3czh_A Cytochrome P450 2R1; vi 100.0 1.2E-75 4.2E-80 576.9 34.1 456 32-502 9-479 (481)
11 3qz1_A Steroid 21-hydroxylase; 100.0 6E-76 2.1E-80 583.1 31.5 445 29-500 23-485 (496)
12 2hi4_A Cytochrome P450 1A2; CY 100.0 2E-75 6.8E-80 577.9 34.1 456 31-500 12-489 (495)
13 3s79_A Cytochrome P450 19A1; o 100.0 2.2E-75 7.4E-80 580.2 30.2 448 28-501 38-498 (503)
14 3ld6_A Lanosterol 14-alpha dem 100.0 6.9E-76 2.3E-80 576.2 25.9 443 33-502 9-457 (461)
15 3n9y_A Cholesterol SIDE-chain 100.0 5.2E-74 1.8E-78 567.9 30.4 457 30-500 4-476 (487)
16 2ve3_A Putative cytochrome P45 100.0 2.9E-73 1E-77 554.2 32.1 432 31-498 8-443 (444)
17 2cib_A Cytochrome P450 51; hem 100.0 5.6E-73 1.9E-77 554.0 30.3 444 34-503 3-453 (455)
18 2ij2_A Cytochrome P450 BM3; mo 100.0 4.9E-71 1.7E-75 542.2 33.4 442 34-500 2-453 (470)
19 3gw9_A Sterol 14alpha-demethyl 100.0 1.4E-71 4.7E-76 545.3 29.3 439 33-499 1-450 (450)
20 3mdm_A Cholesterol 24-hydroxyl 100.0 5.7E-70 2E-74 534.2 35.5 427 53-500 9-443 (456)
21 3dbg_A Putative cytochrome P45 100.0 3E-71 1E-75 544.3 23.8 437 34-502 22-465 (467)
22 3i3k_A Lanosterol 14-alpha dem 100.0 1E-70 3.5E-75 540.0 26.3 444 31-500 7-456 (461)
23 3dax_A Cytochrome P450 7A1; ch 100.0 5.7E-68 1.9E-72 525.2 19.7 448 30-502 8-489 (491)
24 3v8d_A Cholesterol 7-alpha-mon 100.0 1E-67 3.5E-72 522.7 17.9 449 29-502 7-489 (491)
25 2cd8_A Cytochrome P450 monooxy 100.0 5.8E-65 2E-69 492.5 31.6 402 31-503 22-433 (436)
26 3b6h_A Prostacyclin synthase; 100.0 4.9E-66 1.7E-70 511.9 23.5 453 28-502 11-493 (498)
27 1izo_A P450bsbeta, cytochrome 100.0 8.4E-64 2.9E-68 483.5 33.7 402 43-500 8-417 (417)
28 3b98_A Prostaglandin I2 syntha 100.0 6.5E-65 2.2E-69 501.2 21.1 439 29-502 12-474 (475)
29 3awm_A Fatty acid alpha-hydrox 100.0 1.4E-62 4.7E-67 474.6 32.2 402 37-498 4-413 (415)
30 1ued_A P450 OXYC, P450 monooxy 100.0 6.1E-62 2.1E-66 467.5 31.1 386 33-495 8-406 (406)
31 1n97_A CYP175A1; electron tran 100.0 8.6E-64 2.9E-68 478.2 16.1 384 39-499 3-387 (389)
32 1jfb_A Nitric-oxide reductase 100.0 5.9E-61 2E-65 461.5 35.9 370 36-469 2-382 (404)
33 3aba_A Cytochrome P450; oxidor 100.0 3.9E-60 1.3E-64 454.5 34.8 379 50-499 15-403 (403)
34 1cpt_A Cytochrome P450-TERP; o 100.0 1.2E-60 4.2E-65 462.0 28.8 403 32-498 3-428 (428)
35 2zbx_A Cytochrome P450-SU1; be 100.0 3.1E-59 1E-63 449.7 36.9 391 34-496 4-407 (412)
36 3a4g_A Vitamin D hydroxylase; 100.0 1.7E-59 5.9E-64 450.6 33.8 377 51-501 17-404 (411)
37 2jjn_A Cytochrome P450 113A1; 100.0 6.2E-60 2.1E-64 454.7 30.6 396 23-499 7-407 (411)
38 2zwu_A Camphor 5-monooxygenase 100.0 4.7E-60 1.6E-64 454.7 28.5 392 31-503 7-415 (415)
39 1odo_A Putative cytochrome P45 100.0 1.2E-59 4.2E-64 452.1 29.7 377 51-497 12-407 (408)
40 1s1f_A Putative cytochrome P45 100.0 2.7E-59 9.2E-64 449.1 32.0 387 34-495 7-404 (406)
41 3abb_A CYP105D6, cytochrome P4 100.0 9.7E-60 3.3E-64 452.9 28.8 377 50-499 20-408 (408)
42 4fb2_A P450CIN; heme, monooxyg 100.0 2.2E-59 7.5E-64 449.2 29.6 374 51-501 16-396 (398)
43 1gwi_A CYP154C1, cytochrome P4 100.0 1.1E-59 3.9E-64 452.2 27.5 379 51-500 14-411 (411)
44 3ejb_B Biotin biosynthesis cyt 100.0 3.9E-59 1.3E-63 448.9 30.7 380 51-500 10-398 (404)
45 2dkk_A Cytochrome P450; CYP158 100.0 5.6E-59 1.9E-63 446.7 31.0 374 53-499 26-411 (411)
46 2y5n_A MYCG, P-450-like protei 100.0 2.2E-58 7.6E-63 443.4 33.7 373 51-494 34-416 (417)
47 1q5d_A P450 epoxidase; cytochr 100.0 6.1E-59 2.1E-63 448.6 29.6 382 51-500 23-418 (419)
48 3buj_A CALO2; heme, iron, meta 100.0 1.5E-58 5E-63 443.3 30.0 376 53-499 12-397 (397)
49 3tyw_A Putative cytochrome P45 100.0 6.6E-58 2.2E-62 441.4 34.1 353 50-469 25-389 (417)
50 3ivy_A Cytochrome P450 CYP125; 100.0 2E-58 6.8E-63 446.6 30.5 394 33-500 16-430 (433)
51 2uuq_A CYP130, cytochrome P450 100.0 1.1E-58 3.8E-63 445.4 28.2 371 53-498 24-413 (414)
52 1z8o_A 6-deoxyerythronolide B 100.0 3.3E-58 1.1E-62 441.6 31.4 372 52-495 12-402 (404)
53 3nc3_A Cytochrome P450 CYPX; c 100.0 4.9E-59 1.7E-63 451.3 25.7 384 53-497 52-440 (441)
54 2xbk_A PIMD protein; epoxidati 100.0 1.4E-57 4.7E-62 435.6 34.5 368 51-494 23-403 (404)
55 2xkr_A CYP142, putative cytoch 100.0 8E-58 2.7E-62 438.3 32.6 374 53-500 17-396 (398)
56 2z3t_A Cytochrome P450; monoxy 100.0 4.9E-58 1.7E-62 442.5 30.6 380 52-500 18-418 (425)
57 3dsk_A Cytochrome P450 74A, ch 100.0 3E-59 1E-63 462.8 22.3 411 31-468 24-471 (495)
58 2z36_A MOXA, cytochrome P450 t 100.0 3.1E-57 1.1E-61 435.2 33.9 375 51-496 19-408 (413)
59 3lxh_A Cytochrome P450; heme, 100.0 6.8E-58 2.3E-62 441.9 29.4 379 52-501 36-420 (421)
60 3mgx_A Putative P450 monooxyge 100.0 2.1E-58 7.3E-63 442.8 25.6 373 53-498 36-415 (415)
61 2wm5_A CYP124, putative cytoch 100.0 5.8E-57 2E-61 436.0 33.0 354 54-468 44-414 (435)
62 3oft_A Cytochrome P450, CYP101 100.0 9E-58 3.1E-62 438.2 27.0 349 51-469 21-374 (396)
63 3dan_A Cytochrome P450 74A2; A 100.0 1.6E-58 5.6E-63 455.3 22.4 407 31-469 5-454 (473)
64 3oo3_A OXY protein; cytochrome 100.0 4.9E-57 1.7E-61 431.2 31.1 369 51-494 9-383 (384)
65 3tkt_A Cytochrome P450; aromat 100.0 5.9E-57 2E-61 438.2 31.4 360 56-468 47-427 (450)
66 1lfk_A OXYB, P450 monooxygenas 100.0 2.1E-57 7.1E-62 435.2 25.8 349 55-469 14-376 (398)
67 1n40_A P450 MT2, cytochrome P4 100.0 7.9E-57 2.7E-61 430.5 28.7 368 51-494 13-395 (396)
68 3r9b_A Cytochrome P450 164A2; 100.0 1.6E-56 5.4E-61 432.8 28.9 381 51-499 26-418 (418)
69 3rwl_A Cytochrome P450 alkane 100.0 1.4E-55 4.8E-60 425.1 32.5 377 53-497 37-426 (426)
70 1io7_A Cytochrome P450 CYP119; 100.0 3.4E-55 1.2E-59 415.3 25.5 357 56-499 1-368 (368)
71 3b4x_A 367AA long hypothetical 100.0 7.2E-55 2.5E-59 412.3 26.3 355 56-497 1-366 (367)
72 3p3o_A Cytochrome P450; monoox 100.0 4.8E-55 1.6E-59 420.7 22.5 385 42-497 23-415 (416)
73 2wiy_A XPLA-heme, cytochrome P 100.0 5.7E-54 1.9E-58 410.2 29.3 353 53-469 19-374 (394)
74 2rfb_A Cytochrome P450; heme, 100.0 3.8E-54 1.3E-58 404.0 24.5 317 65-469 2-324 (343)
75 4dnj_A Putative cytochrome P45 100.0 1.6E-52 5.6E-57 401.9 27.6 384 40-497 17-411 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 1.5E-47 5.1E-52 366.4 30.3 353 53-469 36-393 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.6E-47 5.4E-52 357.6 1.9 312 36-469 35-361 (381)
78 2krb_A Eukaryotic translation 69.3 15 0.0005 24.6 6.2 51 45-95 5-66 (81)
79 1s79_A Lupus LA protein; RRM, 68.3 23 0.0008 25.1 7.3 51 44-96 14-72 (103)
80 2diu_A KIAA0430 protein; struc 62.4 8.4 0.00029 27.1 3.6 50 44-94 12-64 (96)
81 1iqt_A AUF1, heterogeneous nuc 55.4 31 0.001 22.3 5.7 41 57-97 13-62 (75)
82 3lqv_A PRE-mRNA branch site pr 54.7 56 0.0019 23.4 8.5 57 36-94 3-65 (115)
83 1x4c_A Splicing factor, argini 54.0 51 0.0017 23.4 7.1 50 44-95 18-69 (108)
84 3d2w_A TAR DNA-binding protein 53.9 37 0.0013 23.2 6.0 51 40-92 10-64 (89)
85 3beg_B Splicing factor, argini 53.6 49 0.0017 23.9 7.0 49 44-94 19-69 (115)
86 2mss_A Protein (musashi1); RNA 52.7 41 0.0014 21.7 6.0 50 45-96 3-61 (75)
87 2nlw_A Eukaryotic translation 48.4 53 0.0018 23.1 6.4 53 43-95 17-80 (105)
88 4f25_A Polyadenylate-binding p 47.7 57 0.0019 23.5 6.5 50 44-95 8-64 (115)
89 2wbr_A GW182, gawky, LD47780P; 46.8 68 0.0023 22.1 7.5 51 42-94 8-61 (89)
90 4fxv_A ELAV-like protein 1; RN 43.2 75 0.0026 22.1 6.4 50 44-95 22-80 (99)
91 2dgs_A DAZ-associated protein 41.7 83 0.0029 21.6 7.5 55 44-100 13-76 (99)
92 1p27_B RNA-binding protein 8A; 41.0 85 0.0029 21.9 6.5 50 44-95 26-84 (106)
93 3s7r_A Heterogeneous nuclear r 40.8 57 0.002 21.8 5.3 52 43-96 13-73 (87)
94 1wex_A Hypothetical protein (r 40.8 94 0.0032 22.0 6.6 50 43-94 17-69 (104)
95 2dnh_A Bruno-like 5, RNA bindi 40.4 77 0.0026 22.1 6.2 51 43-95 17-75 (105)
96 1oo0_B CG8781-PA, drosophila Y 39.9 97 0.0033 21.8 6.8 49 44-94 29-86 (110)
97 3ex7_B RNA-binding protein 8A; 39.7 94 0.0032 22.6 6.8 55 44-100 25-89 (126)
98 2cpf_A RNA binding motif prote 39.6 85 0.0029 21.5 6.2 51 43-95 7-69 (98)
99 2cqi_A Nucleolysin TIAR; RNA r 39.0 95 0.0033 21.5 6.7 50 43-94 17-73 (103)
100 2jvr_A Nucleolar protein 3; RN 39.0 92 0.0031 22.4 6.3 51 43-95 30-86 (111)
101 2jwa_A Receptor tyrosine-prote 38.3 33 0.0011 19.9 2.9 6 24-29 32-37 (44)
102 1m46_B IQ4, IQ4 motif from MYO 38.3 25 0.00085 16.7 1.9 12 323-334 8-19 (26)
103 2dgv_A HnRNP M, heterogeneous 38.2 90 0.0031 21.0 6.3 50 44-95 11-67 (92)
104 1whx_A Hypothetical protein ri 37.8 1.1E+02 0.0037 21.8 6.8 49 45-95 14-65 (111)
105 2cqc_A Arginine/serine-rich sp 37.0 96 0.0033 21.0 7.2 54 40-95 14-76 (95)
106 1sjq_A Polypyrimidine tract-bi 37.0 1.1E+02 0.0038 21.7 6.8 52 41-94 16-70 (105)
107 3s8s_A Histone-lysine N-methyl 36.9 1.1E+02 0.0037 21.9 6.4 51 43-95 8-67 (110)
108 2a3j_A U1 small nuclear ribonu 36.3 47 0.0016 24.7 4.5 52 44-95 32-91 (127)
109 2hvz_A Splicing factor, argini 36.2 1E+02 0.0035 21.3 6.2 49 45-95 4-56 (101)
110 2jwn_A Embryonic polyadenylate 36.0 74 0.0025 23.1 5.7 50 45-96 40-98 (124)
111 1x5p_A Negative elongation fac 35.6 1.1E+02 0.0036 21.0 7.6 49 43-95 17-68 (97)
112 1x4g_A Nucleolysin TIAR; struc 35.4 1.2E+02 0.0039 21.4 6.9 50 44-95 28-80 (109)
113 2x1f_A MRNA 3'-END-processing 35.4 1.1E+02 0.0036 20.9 6.8 48 45-94 6-62 (96)
114 2kxn_B Transformer-2 protein h 35.3 1.3E+02 0.0046 22.1 8.5 52 42-95 47-107 (129)
115 2dgx_A KIAA0430 protein; RRM d 34.8 1.1E+02 0.0037 20.9 6.9 49 44-94 12-70 (96)
116 2ywk_A Putative RNA-binding pr 34.7 1E+02 0.0034 20.9 5.9 49 44-94 19-75 (95)
117 1whw_A Hypothetical protein ri 34.4 1.1E+02 0.0038 20.9 6.8 49 44-94 11-68 (99)
118 1sjr_A Polypyrimidine tract-bi 34.2 1.1E+02 0.0037 24.0 6.4 49 45-95 50-103 (164)
119 2cq4_A RNA binding motif prote 33.9 83 0.0028 22.4 5.5 50 45-96 29-87 (114)
120 3zzy_A Polypyrimidine tract-bi 33.8 1.1E+02 0.0039 22.8 6.2 49 44-94 31-84 (130)
121 2fy1_A RNA-binding motif prote 33.7 1.1E+02 0.0037 22.0 6.2 50 44-95 10-67 (116)
122 3mdf_A Peptidyl-prolyl CIS-tra 33.6 1E+02 0.0035 20.3 7.0 50 43-94 9-67 (85)
123 2kvi_A Nuclear polyadenylated 33.6 1.1E+02 0.0039 20.8 6.4 51 44-95 13-64 (96)
124 2div_A TRNA selenocysteine ass 33.3 94 0.0032 21.3 5.6 50 43-94 11-70 (99)
125 2dgu_A Heterogeneous nuclear r 32.8 1.2E+02 0.0042 21.0 6.8 51 43-95 13-64 (103)
126 3ulh_A THO complex subunit 4; 32.6 1.3E+02 0.0043 21.0 6.4 50 44-95 32-89 (107)
127 1nu4_A U1A RNA binding domain; 32.5 1.2E+02 0.004 20.7 7.0 50 44-95 11-70 (97)
128 1x4e_A RNA binding motif, sing 31.8 1.1E+02 0.0038 20.1 5.7 50 43-94 7-65 (85)
129 2d9o_A DNAJ (HSP40) homolog, s 31.3 1E+02 0.0036 21.6 5.4 39 57-95 31-73 (100)
130 2dgo_A Cytotoxic granule-assoc 31.0 1.4E+02 0.0049 21.1 6.5 51 43-95 17-76 (115)
131 2jvo_A Nucleolar protein 3; nu 30.9 1.4E+02 0.0047 21.1 6.2 50 44-95 34-84 (108)
132 2cpz_A CUG triplet repeat RNA- 30.9 1.2E+02 0.004 21.6 5.9 51 43-95 27-86 (115)
133 1wf0_A TDP-43, TAR DNA-binding 30.6 80 0.0027 21.1 4.7 46 45-92 9-58 (88)
134 3ucg_A Polyadenylate-binding p 30.4 1.2E+02 0.0041 20.1 5.6 50 45-96 10-68 (89)
135 2bz2_A Negative elongation fac 30.2 1.1E+02 0.0037 22.3 5.6 49 43-95 41-92 (121)
136 1rk8_A CG8781-PA, CG8781-PA pr 30.0 1.4E+02 0.0046 23.2 6.5 50 44-95 75-133 (165)
137 3md1_A Nuclear and cytoplasmic 29.7 1.2E+02 0.004 19.8 6.1 49 45-95 5-62 (83)
138 1whv_A Poly(A)-specific ribonu 29.6 82 0.0028 22.1 4.3 38 57-94 29-67 (100)
139 2cqd_A RNA-binding region cont 29.2 1.5E+02 0.0053 21.0 6.8 51 44-96 20-79 (116)
140 2xnq_A Nuclear polyadenylated 29.2 1.4E+02 0.0048 20.5 7.2 51 44-95 25-76 (97)
141 2ad9_A Polypyrimidine tract-bi 29.0 1.7E+02 0.0058 21.4 6.9 50 43-94 33-85 (119)
142 1x4b_A Heterogeneous nuclear r 28.9 1E+02 0.0035 22.0 5.3 50 45-96 31-89 (116)
143 2rs2_A Musashi-1, RNA-binding 28.9 1.5E+02 0.0052 20.8 6.5 52 43-96 27-87 (109)
144 1p1t_A Cleavage stimulation fa 28.8 1.2E+02 0.0041 20.9 5.6 49 45-95 12-69 (104)
145 2err_A Ataxin-2-binding protei 28.8 96 0.0033 21.9 5.1 49 44-94 32-87 (109)
146 2dh8_A DAZ-associated protein 28.6 96 0.0033 21.6 5.0 54 44-99 19-81 (105)
147 2cpj_A Non-POU domain-containi 28.4 92 0.0032 21.4 4.8 51 43-95 17-70 (99)
148 2cpi_A CCR4-NOT transcription 28.2 69 0.0024 22.8 4.2 51 43-95 17-82 (111)
149 2la4_A Nuclear and cytoplasmic 28.1 1.5E+02 0.005 20.4 6.3 50 44-95 30-82 (101)
150 3tyt_A Heterogeneous nuclear r 27.9 1.6E+02 0.0055 23.9 6.9 50 44-94 7-60 (205)
151 2pe8_A Splicing factor 45; RRM 27.8 1.5E+02 0.0052 20.8 5.9 55 40-94 7-74 (105)
152 2do0_A HnRNP M, heterogeneous 27.8 1.6E+02 0.0054 20.8 6.2 50 43-94 17-74 (114)
153 2dis_A Unnamed protein product 27.7 1.6E+02 0.0054 20.6 6.4 50 44-95 11-71 (109)
154 1u6f_A Tcubp1, RNA-binding pro 27.7 1.5E+02 0.0053 21.9 6.3 50 44-95 45-103 (139)
155 2d9p_A Polyadenylate-binding p 27.6 1.5E+02 0.0052 20.4 7.0 54 40-95 14-74 (103)
156 1x4d_A Matrin 3; structural ge 27.4 1.6E+02 0.0056 20.6 6.2 54 40-94 14-70 (102)
157 2dgt_A RNA-binding protein 30; 27.0 1.5E+02 0.005 20.0 6.6 50 44-95 13-63 (92)
158 2cqg_A TDP-43, TAR DNA-binding 26.9 1.6E+02 0.0054 20.3 6.5 51 43-95 17-76 (103)
159 1x5s_A Cold-inducible RNA-bind 26.1 1.6E+02 0.0055 20.2 7.4 51 43-95 14-73 (102)
160 3n9u_C Cleavage and polyadenyl 25.8 1.7E+02 0.0059 22.4 6.3 49 45-95 59-118 (156)
161 2khc_A Testis-specific RNP-typ 25.4 1.2E+02 0.004 21.7 5.1 49 45-95 44-101 (118)
162 1x4f_A Matrin 3; structural ge 25.3 1.6E+02 0.0056 21.2 5.6 54 40-94 24-80 (112)
163 2jrs_A RNA-binding protein 39; 25.3 1.8E+02 0.0061 20.4 6.4 49 44-94 29-86 (108)
164 3bs9_A Nucleolysin TIA-1 isofo 25.1 1.5E+02 0.0051 19.5 6.5 50 44-95 9-67 (87)
165 3v4m_A Splicing factor U2AF 65 25.0 1.6E+02 0.0055 20.7 5.6 37 58-94 30-77 (105)
166 2dnq_A RNA-binding protein 4B; 25.0 1.6E+02 0.0054 19.7 7.0 49 44-94 11-60 (90)
167 3ns6_A Eukaryotic translation 24.8 1.6E+02 0.0055 20.3 5.6 51 44-94 9-72 (100)
168 1uaw_A Mouse-musashi-1; RNP-ty 24.5 1.4E+02 0.0048 19.0 5.0 50 45-96 4-62 (77)
169 2cq0_A Eukaryotic translation 24.3 1.1E+02 0.0038 21.2 4.6 51 43-95 17-76 (103)
170 2cq3_A RNA-binding protein 9; 24.2 1.8E+02 0.0061 20.0 8.1 51 43-95 17-74 (103)
171 1h2v_Z 20 kDa nuclear CAP bind 23.2 2.2E+02 0.0074 21.6 6.5 51 43-95 41-100 (156)
172 2qfj_A FBP-interacting repress 23.0 2.9E+02 0.01 22.1 8.0 49 45-95 32-89 (216)
173 1x5t_A Splicing factor 3B subu 23.0 1.7E+02 0.0057 19.8 5.3 49 44-94 8-66 (96)
174 2e5i_A Heterogeneous nuclear r 22.9 2.3E+02 0.0078 20.8 6.7 48 45-94 29-80 (124)
175 4a8x_A RNA-binding protein wit 22.7 1.7E+02 0.0058 19.2 6.8 49 45-95 8-66 (88)
176 2dnm_A SRP46 splicing factor; 22.6 1.9E+02 0.0066 19.8 7.3 49 44-94 16-73 (103)
177 2cq2_A Hypothetical protein LO 22.4 2.2E+02 0.0077 20.5 6.4 51 43-95 27-82 (114)
178 3pgw_S U1-70K; protein-RNA com 22.0 1.5E+02 0.0052 27.6 6.2 51 43-95 104-163 (437)
179 2voo_A Lupus LA protein; RNA-b 21.9 1.7E+02 0.0057 23.5 5.8 50 45-96 113-170 (193)
180 2dhg_A TRNA selenocysteine ass 21.9 2E+02 0.0069 19.8 7.5 54 40-95 8-70 (104)
181 2kt5_A RNA and export factor-b 21.7 2.3E+02 0.0078 20.4 6.4 49 44-94 38-94 (124)
182 2dnz_A Probable RNA-binding pr 21.6 1.9E+02 0.0065 19.4 8.1 50 43-94 7-65 (95)
183 2f3j_A RNA and export factor b 21.0 2.4E+02 0.0084 22.1 6.5 39 57-95 102-148 (177)
184 1l3k_A Heterogeneous nuclear r 21.0 2.1E+02 0.0072 22.5 6.4 51 44-96 16-75 (196)
185 4f02_A Polyadenylate-binding p 20.7 2.2E+02 0.0074 23.1 6.4 54 40-95 14-76 (213)
186 3md3_A Nuclear and cytoplasmic 20.4 2.1E+02 0.007 21.7 6.0 48 45-94 4-59 (166)
187 2xs2_A Deleted in azoospermia- 20.3 89 0.0031 21.6 3.4 48 45-94 13-68 (102)
188 2cq1_A PTB-like protein L; RRM 20.0 2.3E+02 0.0079 19.7 6.9 50 43-94 17-69 (101)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=3.2e-78 Score=597.14 Aligned_cols=460 Identities=24% Similarity=0.408 Sum_probs=350.8
Q ss_pred cCCCCCCCCCCCCCceeecCcCC-CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCC
Q 010612 30 CRRNLNLPPGPCPWPIIGNLNLM-GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAA 108 (506)
Q Consensus 30 ~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~ 108 (506)
.+++.+.||||+++|++||++.+ .++++..+.+++++|||||++++|+.++|+|+||+++++++.+++..|++++....
T Consensus 5 ~ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~ 84 (479)
T 3tbg_A 5 TSSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPI 84 (479)
T ss_dssp ----CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGG
T ss_pred CCCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHH
Confidence 34556799999999999999988 56788999999999999999999999999999999999999988888888876655
Q ss_pred cceeecc--CcceEeccCChhHHHHHHHHhhccCChhhhhh--hHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHH
Q 010612 109 GKYTTYN--YSDMVWATYGPYWRQARKIFLIEIFSPKRLES--FEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNV 184 (506)
Q Consensus 109 ~~~~~~~--~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~v 184 (506)
......+ ..+++++.+|+.|+++|+.+ .+.|+...+.. +...+......+...+....++.+|+..++..+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (479)
T 3tbg_A 85 TQILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNV 163 (479)
T ss_dssp GGGGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHH
T ss_pred HHHhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHH
Confidence 4444332 23456677899999999998 57776666543 4566666677676666666778899999999999999
Q ss_pred HHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccc--ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 010612 185 ISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLE--IGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHN 262 (506)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 262 (506)
++.++||.+++..+. ....+.+............. .....|+...+ ...........+...+.+.+.++...
T Consensus 164 ~~~~~fg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
T 3tbg_A 164 IASLTCGRRFEYDDP----RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEHR 237 (479)
T ss_dssp HHHHHHSCCCCTTCH----HHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCcccccch----hhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999976552 11223333333222222111 11112322221 22234445555666666777776666
Q ss_pred hhccCCCCCCcccHHHHHHhc----cCCCc---cccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 010612 263 AKRKSSTGFVASDMVDVLLQL----ADDPT---LEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDR 334 (506)
Q Consensus 263 ~~~~~~~~~~~~dll~~ll~~----~~~~~---~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~ 334 (506)
+..... ....|+++.++.. ..+.. .++.+. ...++++||+|||+++++|++++|++||++|+|||+|++.
T Consensus 238 ~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~ 315 (479)
T 3tbg_A 238 MTWDPA--QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDD 315 (479)
T ss_dssp HHCCTT--SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred Hhhhcc--cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 654332 3334555555432 11111 112222 2278999999999999999999999999999999999999
Q ss_pred HhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 010612 335 VIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRP 414 (506)
Q Consensus 335 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P 414 (506)
+++.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|
T Consensus 316 ~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~P 395 (479)
T 3tbg_A 316 VIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHP 395 (479)
T ss_dssp HTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCG
T ss_pred HHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCc
Confidence 99998999999999999999999999999999999887778899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEe
Q 010612 415 ERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVV 494 (506)
Q Consensus 415 ~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (506)
|||++++++. .++..|+|||+|+|.|+|++||++|+++++|+||++|||+++++.. .+......+++..|+ ++.|+
T Consensus 396 eRfl~~~~~~-~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~P~-~~~v~ 471 (479)
T 3tbg_A 396 EHFLDAQGHF-VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP--RPSHHGVFAFLVSPS-PYELC 471 (479)
T ss_dssp GGGBCTTCCB-CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSC--CCCSCEEESSSEEEC-CCCBE
T ss_pred cccCCCCccc-CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCC--CccccccceeeecCC-CeEEE
Confidence 9999876432 3566899999999999999999999999999999999999987742 234445567777774 89999
Q ss_pred eccCCCCC
Q 010612 495 PQPRLPIH 502 (506)
Q Consensus 495 ~~~r~~~~ 502 (506)
++||++.|
T Consensus 472 ~~pRs~~h 479 (479)
T 3tbg_A 472 AVPRHHHH 479 (479)
T ss_dssp EEEC----
T ss_pred EEECCCCC
Confidence 99999866
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=3.6e-77 Score=591.07 Aligned_cols=457 Identities=24% Similarity=0.401 Sum_probs=367.3
Q ss_pred CCCCCCCCCCCCCceeecCcCCC--CCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCC
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLMG--SLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAA 108 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~ 108 (506)
+++.+.||||+++|++||++.+. ++++..+.+++++|||||++++|+.++++|+||+++++++.++...|.+++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34567899999999999999884 3578899999999999999999999999999999999999998888988776543
Q ss_pred cceeeccCcceEeccCChhHHHHHHHHhhccCCh--hhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHH
Q 010612 109 GKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSP--KRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVIS 186 (506)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~ 186 (506)
......++.+++++.+|+.|+++||++ .++|+. ..+..+.+.+.++++.+++.+.+..++++|+..++..+++|+|+
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~ 162 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS 162 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence 333333334555666799999999998 577764 45677899999999999999987677899999999999999999
Q ss_pred HHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 010612 187 RMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRK 266 (506)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 266 (506)
.++||.+++..+ +....+....+.+........+...+|++.+++ ....+...+..+.+.+++...++++++...
T Consensus 163 ~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 237 (494)
T 3swz_A 163 LICFNTSYKNGD----PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENYKEKFR 237 (494)
T ss_dssp HHHHSCCCCTTC----THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHcCCcCCCCC----HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999886533 222344444444444444455666788887653 334566777788888888888888776543
Q ss_pred CCCCCCcccHHHHHHhccCCCc--------cccchhhh------hhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHH
Q 010612 267 SSTGFVASDMVDVLLQLADDPT--------LEFKLERD------QDLLAGGTESSTVTLEWAISELMKKPEIFDKATKEL 332 (506)
Q Consensus 267 ~~~~~~~~dll~~ll~~~~~~~--------~~~~~~~~------~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei 332 (506)
.....|+++.|+++..+.. ..+.+++. ..+++||+|||+++++|++++|++||++|+|+++|+
T Consensus 238 ---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei 314 (494)
T 3swz_A 238 ---SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI 314 (494)
T ss_dssp ---TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ---ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 2345689999997532110 01122222 678999999999999999999999999999999999
Q ss_pred HHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 010612 333 DRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEF 412 (506)
Q Consensus 333 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f 412 (506)
+++++.++.++.+++.+||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|
T Consensus 315 ~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F 394 (494)
T 3swz_A 315 DQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQF 394 (494)
T ss_dssp HHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSC
T ss_pred HHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccC
Confidence 99999888899999999999999999999999999987889999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCC-CCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCc
Q 010612 413 RPERFFGKEIDV-KGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPL 491 (506)
Q Consensus 413 ~P~R~l~~~~~~-~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (506)
+||||+++++.. ......++|||.|+|.|+|++||++|++++++.|+++|+|+++++.. ........+++..| .++
T Consensus 395 ~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~p-~~~ 471 (494)
T 3swz_A 395 MPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ--LPSLEGIPKVVFLI-DSF 471 (494)
T ss_dssp CGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCC--CCCCSCEESSSEEC-CCC
T ss_pred CcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCC--CCCCCCccceeecC-CCc
Confidence 999999865432 22456799999999999999999999999999999999999876642 23344455666666 589
Q ss_pred eEeeccCC
Q 010612 492 LVVPQPRL 499 (506)
Q Consensus 492 ~~~~~~r~ 499 (506)
.|++++|+
T Consensus 472 ~v~~~~R~ 479 (494)
T 3swz_A 472 KVKIKVRQ 479 (494)
T ss_dssp CEEEEECH
T ss_pred EEEEEEcC
Confidence 99999986
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-77 Score=593.46 Aligned_cols=460 Identities=25% Similarity=0.429 Sum_probs=350.0
Q ss_pred cCCCCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 30 CRRNLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 30 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
++++.+.||||+++|++||++.+.++++..+.+++++||+||++++|+.++++|+||+++++++.++...|.+++.....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 34566789999999999999999889999999999999999999999999999999999999998888888877654332
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChhhhh------hhHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHHH
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLE------SFEFIRVQEIKKFLFGLYKS--SAKPVHLKDHLSKLS 181 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~------~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~ 181 (506)
.... ++.+++++.+|+.|+++|+.+ .+.|+..... .+.+.+.++++++++.+.+. +++++|+.+++..++
T Consensus 84 ~~~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~ 161 (507)
T 3pm0_A 84 RVVS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV 161 (507)
T ss_dssp HHGG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred Hhhc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence 2222 223455667799999999998 4655443333 38889999999999999765 467899999999999
Q ss_pred HHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccccccccccccccccc--chHHHHHHHHHHHHHHHHHHHH
Q 010612 182 LNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQ--GHIKRMKALMKKLDRFYELVLH 259 (506)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~~~~~~~l~~~~~~~i~ 259 (506)
+|+++.++||.+++..+ .....+.+.+..+........+...+|++.+++.. ...+...+..+.+.+++.+.++
T Consensus 162 ~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (507)
T 3pm0_A 162 ANVMSAVCFGCRYSHDD----PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFL 237 (507)
T ss_dssp HHHHHHHHTSCCCCTTC----HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccccCCCCC----HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986544 12234444445555444444455567877665322 1356677778888889999998
Q ss_pred HhhhhccCCCCCCcccHHHHHHhccCCC-----------ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHH
Q 010612 260 EHNAKRKSSTGFVASDMVDVLLQLADDP-----------TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDK 327 (506)
Q Consensus 260 ~~~~~~~~~~~~~~~dll~~ll~~~~~~-----------~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~ 327 (506)
++++..+. +....|+++.++...+.. -.++.+ .....+++||+|||+++++|++++|++||++|+|
T Consensus 238 ~~~~~~~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~k 315 (507)
T 3pm0_A 238 RHCESLRP--GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTR 315 (507)
T ss_dssp HHHHHCCT--TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHhcccc--ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHH
Confidence 88876542 134578999998543210 112222 2237899999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCC
Q 010612 328 ATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWE 407 (506)
Q Consensus 328 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~ 407 (506)
|++|+++++++++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+
T Consensus 316 l~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~ 395 (507)
T 3pm0_A 316 VQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWP 395 (507)
T ss_dssp HHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCS
T ss_pred HHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCC
Confidence 99999999988888999999999999999999999999999877799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCC-CccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCC
Q 010612 408 NPNEFRPERFFGKEIDVKG-HDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTP 486 (506)
Q Consensus 408 ~p~~f~P~R~l~~~~~~~~-~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 486 (506)
||++|+||||+++++.... ....++|||+|+|.|+|++||.+|++++++.|+++|+|+++++. +++.....+++..
T Consensus 396 dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~ 472 (507)
T 3pm0_A 396 NPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE---PAKMNFSYGLTIK 472 (507)
T ss_dssp SSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTC---CSCCCEEESSSEE
T ss_pred CcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCC---CCCCCCCCCcccc
Confidence 9999999999986543221 23579999999999999999999999999999999999987663 3455555677776
Q ss_pred CCCCceEeeccCCCC
Q 010612 487 KKIPLLVVPQPRLPI 501 (506)
Q Consensus 487 ~~~~~~~~~~~r~~~ 501 (506)
|+ ++.|++++|+..
T Consensus 473 p~-~~~v~~~~R~~~ 486 (507)
T 3pm0_A 473 PK-SFKVNVTLRESM 486 (507)
T ss_dssp EC-SCCEEEEESSCC
T ss_pred CC-CcEEEEEEcccc
Confidence 65 679999999854
No 4
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=2.6e-76 Score=584.00 Aligned_cols=454 Identities=20% Similarity=0.309 Sum_probs=361.7
Q ss_pred ccCCCCCCCCCCCCCceeecCcCC-----CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCC
Q 010612 29 RCRRNLNLPPGPCPWPIIGNLNLM-----GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASR 103 (506)
Q Consensus 29 ~~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 103 (506)
...++.+.+|||+++|++||++.+ .++++..+.+++++|||||++++|+.++++++||+++++++.++ ..|.++
T Consensus 18 ~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r 96 (482)
T 3k9v_A 18 GETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQR 96 (482)
T ss_dssp -CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCC
T ss_pred cccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCC
Confidence 345677889999999999999877 24678889999999999999999999999999999999999874 566665
Q ss_pred CCCCCccee--eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc---CCCceehHHHHH
Q 010612 104 PRTAAGKYT--TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS---SAKPVHLKDHLS 178 (506)
Q Consensus 104 ~~~~~~~~~--~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~vdl~~~~~ 178 (506)
+........ ..+...+++..+|+.|+++||.+....++.+.++.+.+.+.++++.+++.+.+. +|+++|+.+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~ 176 (482)
T 3k9v_A 97 LEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELN 176 (482)
T ss_dssp CCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHH
T ss_pred CCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence 432211000 011224456667999999999995444588899999999999999999999764 466899999999
Q ss_pred HHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccccccccc-ccccccccchHHHHHHHHHHHHHHHHHH
Q 010612 179 KLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIP-WLGFLDLQGHIKRMKALMKKLDRFYELV 257 (506)
Q Consensus 179 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 257 (506)
.+++|+|+.++||.+++..+.........+.+.+..+....... ..+| ++..+......+...+..+.+.+++.+.
T Consensus 177 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 253 (482)
T 3k9v_A 177 KWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKM---MVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPC 253 (482)
T ss_dssp HHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGG---SSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHH---HhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999996654322234466777766665443321 1233 1211112233455666677777888888
Q ss_pred HHHhhhhccCCCCCCcccHHHHHHhccCCCccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhc
Q 010612 258 LHEHNAKRKSSTGFVASDMVDVLLQLADDPTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIG 337 (506)
Q Consensus 258 i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~ 337 (506)
++++.++... ....|++..++.... .+.++......++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus 254 i~~r~~~~~~---~~~~d~l~~ll~~~~-l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~ 329 (482)
T 3k9v_A 254 IDNRLQRYSQ---QPGADFLCDIYQQDH-LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLP 329 (482)
T ss_dssp HHHHHHHTTT---CTTSCHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhcc---CCchHHHHHHHhccC-CCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 8888765432 234678888886532 111222333488999999999999999999999999999999999999999
Q ss_pred CCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCC
Q 010612 338 RNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERF 417 (506)
Q Consensus 338 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~ 417 (506)
+++.++.+++++||||+|||+||||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||
T Consensus 330 ~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRf 408 (482)
T 3k9v_A 330 DNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT-TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERW 408 (482)
T ss_dssp TTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE-EEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGG
T ss_pred CCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc-ccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCcccc
Confidence 888899999999999999999999999999974 6999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 418 FGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 418 l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
++++. ...+..++|||.|+|.|+|++||++|+++++++|+++|+++++++. ++ ....+.++.|+.++.|++++
T Consensus 409 l~~~~--~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~p~~~~~~~~~~ 481 (482)
T 3k9v_A 409 LQKEK--KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE---PV--EMLHLGILVPSRELPIAFRP 481 (482)
T ss_dssp TCTTS--CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC---CC--CEEESSSEEESSSCCEEEEE
T ss_pred CCCCC--CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC---Cc--ccccceeecCCCCcceEEee
Confidence 98653 2456789999999999999999999999999999999999987652 33 33456777899999999998
Q ss_pred C
Q 010612 498 R 498 (506)
Q Consensus 498 r 498 (506)
|
T Consensus 482 R 482 (482)
T 3k9v_A 482 R 482 (482)
T ss_dssp C
T ss_pred C
Confidence 7
No 5
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=9.7e-76 Score=577.53 Aligned_cols=453 Identities=25% Similarity=0.381 Sum_probs=354.4
Q ss_pred CCCCCCCCCCCCCceeecCcCC-CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLM-GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
+++.+.||||+++|++||+..+ .++++..+.+++++|||||++++|+.++++++||+++++++.++...|.+++.....
T Consensus 6 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 1po5_A 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVV 85 (476)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGG
T ss_pred cCCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 3445789999999999999988 678899999999999999999999999999999999999998776677765432211
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChh--hhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPK--RLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISR 187 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~ 187 (506)
.... .+ ..++..+|+.|+++||++ .+.|+.. .++.+.+.+.++++++++.+.+..++++|+.+++..+++|+|+.
T Consensus 86 ~~~~-~~-~~l~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~ 162 (476)
T 1po5_A 86 DPIF-QG-YGVIFANGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICS 162 (476)
T ss_dssp CSCC-SS-CCCCCSSHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred Hhhc-CC-CceEecCCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence 1111 12 235555899999999987 5778776 45678899999999999999876667899999999999999999
Q ss_pred HhhccccccccccCCCChHHHHHHHHHHHHhhccc-----cccccccc-cccccccchHHHHHHHHHHHHHHHHHHHHHh
Q 010612 188 MVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVL-----EIGDSIPW-LGFLDLQGHIKRMKALMKKLDRFYELVLHEH 261 (506)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 261 (506)
++||.+++..+ ..+....+.+....... .+...+|+ +.++ ....++..+..+.+.+++.+.++++
T Consensus 163 ~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r 233 (476)
T 1po5_A 163 IVFGKRFDYKD-------PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEKH 233 (476)
T ss_dssp HHHSSCCCTTC-------HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS--SCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCC-------HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999986433 23333333332222110 11224554 2222 2223566777888899999999988
Q ss_pred hhhccCCCCCCcccHHHHHHhccCC-----Cc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHH
Q 010612 262 NAKRKSSTGFVASDMVDVLLQLADD-----PT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELD 333 (506)
Q Consensus 262 ~~~~~~~~~~~~~dll~~ll~~~~~-----~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~ 333 (506)
++..+ .....|+++.|+..... .. .++.+ ....++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 234 ~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~ 310 (476)
T 1po5_A 234 RATLD---PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 310 (476)
T ss_dssp HTTCC---TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHhcC---CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 76532 12346899998854211 10 11122 2227899999999999999999999999999999999999
Q ss_pred HHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 010612 334 RVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFR 413 (506)
Q Consensus 334 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~ 413 (506)
+++++++.++.+++++||||+|||+|+||++|+++...+|.+++|++++|+.||||+.|.++.+++||||++|+||++|+
T Consensus 311 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~ 390 (476)
T 1po5_A 311 QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFN 390 (476)
T ss_dssp HHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCC
T ss_pred HHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccC
Confidence 99988778999999999999999999999999999766799999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCccc-ccCCCCCCCCCce
Q 010612 414 PERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEE-SFGLSTPKKIPLL 492 (506)
Q Consensus 414 P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 492 (506)
||||+++++... ....++|||+|+|.|+|++||.+|++++++.|+++|+++++++.. ..+... ..+++..| .++.
T Consensus 391 PeR~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~ 466 (476)
T 1po5_A 391 PGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPE--DIDLTPRESGVGNVP-PSYQ 466 (476)
T ss_dssp GGGGBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGG--GCCCCCCSTTSSCCC-CCCC
T ss_pred chhhCCCCCCcc-CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCC--CCCccCCcCceeecC-cceE
Confidence 999997553322 355799999999999999999999999999999999999876631 122333 45777777 6899
Q ss_pred EeeccCCCCC
Q 010612 493 VVPQPRLPIH 502 (506)
Q Consensus 493 ~~~~~r~~~~ 502 (506)
|++++|...|
T Consensus 467 v~~~~R~~~~ 476 (476)
T 1po5_A 467 IRFLARHHHH 476 (476)
T ss_dssp BEEEECC---
T ss_pred EEEEecCCCC
Confidence 9999997653
No 6
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=4.1e-76 Score=580.21 Aligned_cols=456 Identities=25% Similarity=0.374 Sum_probs=358.4
Q ss_pred CCCCCCCCCCCCCceeecCcCC-CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLM-GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
+++.+.||||+++|++||+..+ .++++..+.+++++|||||++++++.++++++||+++++++.++...|.+++.....
T Consensus 6 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 2fdv_A 6 SSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATF 85 (476)
T ss_dssp --CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHH
T ss_pred cccCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHH
Confidence 3444789999999999999988 578899999999999999999999999999999999999998766667665432211
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChhhh--hhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRL--ESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISR 187 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~ 187 (506)
.... .+ ..++..+|+.|+++|+.+ .++|+...+ +.+.+.+.++++++++.+.+..++++|+.+++..+++|+|+.
T Consensus 86 ~~~~-~~-~~l~~~~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~ 162 (476)
T 2fdv_A 86 DWVF-KG-YGVVFSNGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISS 162 (476)
T ss_dssp HHHH-TT-CSSSSCCHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred hhhc-CC-CCeEecCchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence 1111 12 234455799999999998 688887766 778999999999999999876667899999999999999999
Q ss_pred HhhccccccccccCCCChHHHHHHHHHHHHhhccc--cccccccc-cccccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 010612 188 MVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVL--EIGDSIPW-LGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAK 264 (506)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 264 (506)
++||.+++..+ .....+.+.+..++...... .+...+|+ +.+++ ...+...+..+.+.+++.+.++++++.
T Consensus 163 ~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~ 236 (476)
T 2fdv_A 163 IVFGDRFDYKD----KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRT 236 (476)
T ss_dssp HHHSSCCCTTC----HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCcCCCCC----HHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999986433 12234444444444322211 12234565 33322 334567778888899999999988765
Q ss_pred ccCCCCCCcccHHHHHHhccCC------C-ccccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 010612 265 RKSSTGFVASDMVDVLLQLADD------P-TLEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVI 336 (506)
Q Consensus 265 ~~~~~~~~~~dll~~ll~~~~~------~-~~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~ 336 (506)
.+ .....|+++.+++...+ . -.++.+. ....+++||+|||+++++|++++|++||++|+++++|+++++
T Consensus 237 ~~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~ 313 (476)
T 2fdv_A 237 LD---PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVI 313 (476)
T ss_dssp CC---TTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred cC---CCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhh
Confidence 32 12346899999875321 0 0122222 227899999999999999999999999999999999999999
Q ss_pred cCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 010612 337 GRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPER 416 (506)
Q Consensus 337 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R 416 (506)
++++.++.+++++||||+|||+|+||++|+++...+|++.+|++++|+.||||+.|.++.+++||||++|+||++|+|||
T Consensus 314 ~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR 393 (476)
T 2fdv_A 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393 (476)
T ss_dssp CSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGG
T ss_pred cCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchh
Confidence 88777899999999999999999999999999666799999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCccc-ccCCCCCCCCCceEee
Q 010612 417 FFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEE-SFGLSTPKKIPLLVVP 495 (506)
Q Consensus 417 ~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 495 (506)
|++++.... ....++|||+|+|.|+|++||.+|++++++.|+++|+++++++.. ..+... ..+++..| .++.+++
T Consensus 394 ~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~ 469 (476)
T 2fdv_A 394 FLNEKGQFK-KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK--DIDVSPKHVGFATIP-RNYTMSF 469 (476)
T ss_dssp GBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCSCSEESSSEEC-CCCCEEE
T ss_pred hCCCCCCCC-CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCC--CCCccccccceeecC-CceEEEE
Confidence 997543322 355799999999999999999999999999999999999876631 122333 45777777 6899999
Q ss_pred ccCCCCC
Q 010612 496 QPRLPIH 502 (506)
Q Consensus 496 ~~r~~~~ 502 (506)
++|.+.|
T Consensus 470 ~~R~~~~ 476 (476)
T 2fdv_A 470 LPRHHHH 476 (476)
T ss_dssp EEC----
T ss_pred EecccCC
Confidence 9998654
No 7
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1.8e-75 Score=575.99 Aligned_cols=456 Identities=26% Similarity=0.342 Sum_probs=348.7
Q ss_pred CCCCCCCCCCCCCceeecCcCC-CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLM-GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
+++.+.||||+++|++||+..+ .++++..+.+++++|||||++++|+.++++++||+++++++.++...|.+++.....
T Consensus 7 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~ 86 (477)
T 1r9o_A 7 SGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA 86 (477)
T ss_dssp --CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCC
T ss_pred cCCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhh
Confidence 3444689999999999999988 467889999999999999999999999999999999999998776677765432211
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChh--hhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPK--RLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISR 187 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~ 187 (506)
.... .+ ..++..+|+.|+++||.+ .+.|+.. .++.+.+.+.++++.+++.+.+..++++|+.+++..+++|+|+.
T Consensus 87 ~~~~-~~-~~l~~~~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~ 163 (477)
T 1r9o_A 87 ERAN-RG-FGIVFSNGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICS 163 (477)
T ss_dssp CTTT-CT-TSSTTCCHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHH
T ss_pred hhcc-CC-CceEecCChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence 1111 11 234555799999999987 5778776 45678899999999999999876567899999999999999999
Q ss_pred HhhccccccccccCCCChHHHHHHHHHHHHhhc--cccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010612 188 MVLGKNYTEETEQDFVTPQEYTEMLQELFYLNG--VLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKR 265 (506)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 265 (506)
++||.+++..+ .....+.+.+...+.... ...+...+|++..+.+ ...++..+..+.+.+++.+.++++++..
T Consensus 164 ~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 238 (477)
T 1r9o_A 164 IIFHKRFDYKD----QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAFMKSYILEKVKEHQESM 238 (477)
T ss_dssp HHHSCCCCTTC----HHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT-TCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHccCcCCCCC----HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999986433 112334444444442221 1122334665322222 2235667778888999999999887653
Q ss_pred cCCCCCCcccHHHHHHhccCC-----C--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhc
Q 010612 266 KSSTGFVASDMVDVLLQLADD-----P--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIG 337 (506)
Q Consensus 266 ~~~~~~~~~dll~~ll~~~~~-----~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~ 337 (506)
. .....|+++.++..... . -.++.+ ....++++||+|||+++++|++++|++||++|+||++|++++++
T Consensus 239 ~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 315 (477)
T 1r9o_A 239 D---MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG 315 (477)
T ss_dssp C---TTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred C---CCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence 2 12346899998853210 0 112222 22378999999999999999999999999999999999999998
Q ss_pred CCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCC
Q 010612 338 RNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERF 417 (506)
Q Consensus 338 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~ 417 (506)
+++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||
T Consensus 316 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~ 395 (477)
T 1r9o_A 316 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF 395 (477)
T ss_dssp SSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGG
T ss_pred CCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccce
Confidence 87789999999999999999999999999997667999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCccc-ccCCCCCCCCCceEeec
Q 010612 418 FGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEE-SFGLSTPKKIPLLVVPQ 496 (506)
Q Consensus 418 l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 496 (506)
++++.... ....++|||+|+|.|+|++||++|++++++.|+++|+++++++.. ...... ..+++..| .++.++++
T Consensus 396 l~~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~~~~~ 471 (477)
T 1r9o_A 396 LDEGGNFK-KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPK--NLDTTPVVNGFASVP-PFYQLCFI 471 (477)
T ss_dssp BCTTSCBC-CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCCCBCCSSSCBC-CCCCEEEE
T ss_pred ECCCCCcC-ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCC--CCCccCCcCceeecC-CCeEEEEE
Confidence 97543322 355799999999999999999999999999999999999876631 112223 45677777 68999999
Q ss_pred cCCCC
Q 010612 497 PRLPI 501 (506)
Q Consensus 497 ~r~~~ 501 (506)
+|...
T Consensus 472 ~R~~~ 476 (477)
T 1r9o_A 472 PIHHH 476 (477)
T ss_dssp ECCC-
T ss_pred Eeccc
Confidence 99754
No 8
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=1.1e-75 Score=578.25 Aligned_cols=455 Identities=27% Similarity=0.393 Sum_probs=357.3
Q ss_pred CCCCCCCCCCCCCceeecCcCC-CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLM-GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
+++.+.||||+++|++||++.+ .++++..+.+++++||+||++++|+.++++|+||+++++++.++...|.+++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 4566889999999999999998 578899999999999999999999999999999999999999887778776544322
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChhhh--hhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRL--ESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISR 187 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~ 187 (506)
.... + . .++..+|+.|+++||+. .+.|+...+ ..+.+.+.++++.+++.+.+..++++|+.+++..+++|+|+.
T Consensus 86 ~~~~-~-~-~l~~~~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~ 161 (476)
T 3e6i_A 86 HAHR-D-R-GIIFNNGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIAD 161 (476)
T ss_dssp GGGT-T-S-SSTTCCSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHH
T ss_pred heec-C-C-CEEecCCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHH
Confidence 2221 2 2 45566799999999987 466654433 346688899999999999876678899999999999999999
Q ss_pred HhhccccccccccCCCChHHHHHHHHHHHHhhcc--cccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 010612 188 MVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGV--LEIGDSIP-WLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAK 264 (506)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 264 (506)
++||.+++..+. ....+...+...+..... ..+...+| ++.+++ ...+...+..+.+.+++.+.++++++.
T Consensus 162 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 235 (476)
T 3e6i_A 162 ILFRKHFDYNDE----KFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQS 235 (476)
T ss_dssp HHHSCCCCTTCH----HHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCCCCCCH----HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999876441 123344444444333221 11223345 343332 334667778888899999999988876
Q ss_pred ccCCCCCCcccHHHHHHhccCCCc-------cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 010612 265 RKSSTGFVASDMVDVLLQLADDPT-------LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVI 336 (506)
Q Consensus 265 ~~~~~~~~~~dll~~ll~~~~~~~-------~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~ 336 (506)
.+. ....|+++.++....... .++.+ .....+++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus 236 ~~~---~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~ 312 (476)
T 3e6i_A 236 LDP---NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVI 312 (476)
T ss_dssp CCT---TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred CCC---CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence 532 234689998886432211 11122 2227899999999999999999999999999999999999999
Q ss_pred cCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 010612 337 GRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPER 416 (506)
Q Consensus 337 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R 416 (506)
+.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||
T Consensus 313 ~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR 392 (476)
T 3e6i_A 313 GPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEH 392 (476)
T ss_dssp TTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGG
T ss_pred CCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchh
Confidence 98888999999999999999999999999999767799999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccc-cCCCCCCCCCceEee
Q 010612 417 FFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEES-FGLSTPKKIPLLVVP 495 (506)
Q Consensus 417 ~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 495 (506)
|++++... .....++|||.|+|.|+|++||++|++++++.|+++|+|++..+. ..++.... .|++..| .++.|++
T Consensus 393 ~l~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p-~~~~~~~ 468 (476)
T 3e6i_A 393 FLNENGKF-KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP--KDIDLSPIHIGFGCIP-PRYKLCV 468 (476)
T ss_dssp GBCTTSSB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCT--TTCCCSCSEESSSEEC-CCCCEEE
T ss_pred hcCCCCCc-cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCC--CCCCCCcccCccccCC-CCeEEEE
Confidence 99765432 245679999999999999999999999999999999999975442 23344432 5666666 4799999
Q ss_pred ccCCCCC
Q 010612 496 QPRLPIH 502 (506)
Q Consensus 496 ~~r~~~~ 502 (506)
++|++.|
T Consensus 469 ~~R~~~~ 475 (476)
T 3e6i_A 469 IPRSHHH 475 (476)
T ss_dssp EECC---
T ss_pred EeccccC
Confidence 9998765
No 9
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=2.7e-77 Score=591.04 Aligned_cols=449 Identities=22% Similarity=0.356 Sum_probs=347.6
Q ss_pred CCCCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhc-cccccCCCCCCCc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIH-DANFASRPRTAAG 109 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~-~~~~~~~~~~~~~ 109 (506)
+.+.+.||||+++|++||+..+.++++.++.+++++|||||++++|+.++++|+||+++++++.++ ...|.+++.....
T Consensus 10 ~~k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~ 89 (485)
T 3nxu_A 10 LFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV 89 (485)
T ss_dssp HHHHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC
T ss_pred HHhhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc
Confidence 445567999999999999999988899999999999999999999999999999999999999877 5566665443322
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHHHHHHHHH
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS--SAKPVHLKDHLSKLSLNVISR 187 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~vi~~ 187 (506)
... ..+++..+|+.|+++||.+ .++|+.++++.+.+.+.++++++++.+.+. .++++|+.+++..+++|+|+.
T Consensus 90 ~~~----~~~l~~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~ 164 (485)
T 3nxu_A 90 GFM----KSAISIAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITS 164 (485)
T ss_dssp GGG----GGSTTTCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHH
T ss_pred ccc----ccCccccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHH
Confidence 211 2346667899999999998 699999999999999999999999998753 577899999999999999999
Q ss_pred HhhccccccccccCCCChHHHHHHHHHHHHhhcc---cccccccccccc----ccccchHHHHHHHHHHHHHHHHHHHHH
Q 010612 188 MVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGV---LEIGDSIPWLGF----LDLQGHIKRMKALMKKLDRFYELVLHE 260 (506)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~l~~----~~~~~~~~~~~~~~~~l~~~~~~~i~~ 260 (506)
++||.+++..+.. ...+...+..+...... ......+|++.. +..... .....+.+.+.+++.+++
T Consensus 165 ~~fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 237 (485)
T 3nxu_A 165 TSFGVNIDSLNNP----QDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF---PREVTNFLRKSVKRMKES 237 (485)
T ss_dssp HHHSCCCCGGGCT----TCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSS---CHHHHHHHHHHHHHHHHH
T ss_pred HHcCCccccccCC----CcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhc---hHHHHHHHHHHHHHHHHH
Confidence 9999999765421 12333332222111000 001112333211 100010 112333444455555544
Q ss_pred hhhhccCCCCCCcccHHHHHHhccCCCc-------cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHH
Q 010612 261 HNAKRKSSTGFVASDMVDVLLQLADDPT-------LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKEL 332 (506)
Q Consensus 261 ~~~~~~~~~~~~~~dll~~ll~~~~~~~-------~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei 332 (506)
+.+. ......|+++.+++...... .++++ .....+++||+|||+++++|++++|++||++|+|+++|+
T Consensus 238 ~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei 313 (485)
T 3nxu_A 238 RLED----TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEI 313 (485)
T ss_dssp HHHC----C---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHhc----cCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 4332 12445689999997654321 11122 222789999999999999999999999999999999999
Q ss_pred HHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 010612 333 DRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEF 412 (506)
Q Consensus 333 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f 412 (506)
++++++++.++.+++.+||||+|||+|+||++|+++. .+|++.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 314 ~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F 392 (485)
T 3nxu_A 314 DAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKF 392 (485)
T ss_dssp HHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSC
T ss_pred HHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCc
Confidence 9999988889999999999999999999999999987 569999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCce
Q 010612 413 RPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLL 492 (506)
Q Consensus 413 ~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (506)
+||||++++.+ ...+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++. +.+.....+.++.|+.++.
T Consensus 393 ~PeR~l~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~~~~~ 468 (485)
T 3nxu_A 393 LPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET---QIPLKLSLGGLLQPEKPVV 468 (485)
T ss_dssp CGGGGSHHHHT-TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTC---CSSCCBCSSSSCCBSSCCE
T ss_pred CccccCCCccc-cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCC---CCCcccCCCeeccCCCCeE
Confidence 99999975422 2245678999999999999999999999999999999999987663 2344445567788989999
Q ss_pred EeeccCCC
Q 010612 493 VVPQPRLP 500 (506)
Q Consensus 493 ~~~~~r~~ 500 (506)
|++++|+.
T Consensus 469 ~~~~~r~~ 476 (485)
T 3nxu_A 469 LKVESRDG 476 (485)
T ss_dssp EEEEEC--
T ss_pred EEEEEccC
Confidence 99999973
No 10
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1.2e-75 Score=576.94 Aligned_cols=456 Identities=27% Similarity=0.453 Sum_probs=358.5
Q ss_pred CCCCCCCCCCCCceeecCcCCCCC---ChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCC
Q 010612 32 RNLNLPPGPCPWPIIGNLNLMGSL---PHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAA 108 (506)
Q Consensus 32 ~~~~~ppgp~~~p~~G~~~~~~~~---~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~ 108 (506)
++.+.||||+++|++||+..+.+. ++..+.+++++|||||++++|+.++++|+||+++++++.++...|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 455789999999999999887433 78999999999999999999999999999999999999987767776653321
Q ss_pred cceeeccCcceEeccCChhHHHHHHHHhhccCChhhh--hhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHH
Q 010612 109 GKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRL--ESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVIS 186 (506)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~ 186 (506)
..... +..++++..+|+.|+++|+.+ .++|+...+ ..+.+.+.++++.+++.+.+.+++++|+.+++..+++|+|+
T Consensus 89 ~~~~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 89 FMKMT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHHH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHhhc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence 11111 112335567899999999998 588876544 57889999999999999987666789999999999999999
Q ss_pred HHhhccccccccccCCCChHHHHHHHHHHHHhhcccc--ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 010612 187 RMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLE--IGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAK 264 (506)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 264 (506)
.++||.+++..+ .....+.+.++.++....... +...+|++.+++ ....++..+..+.+.+++.+.++++++.
T Consensus 167 ~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 241 (481)
T 3czh_A 167 LIIFGERFTYED----TDFQHMIELFSENVELAASASVFLYNAFPWIGILP-FGKHQQLFRNAAVVYDFLSRLIEKASVN 241 (481)
T ss_dssp HHHHSSCCCTTC----HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCS-SSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCCCCC----HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999986432 122344444445444322111 334567764432 2345667778888899999999988765
Q ss_pred ccCCCCCCcccHHHHHHhccCC-----C--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 010612 265 RKSSTGFVASDMVDVLLQLADD-----P--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVI 336 (506)
Q Consensus 265 ~~~~~~~~~~dll~~ll~~~~~-----~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~ 336 (506)
.. .....|+++.|++...+ . -.++.+ .....+++||+|||+++++|++++|++||++|+||++|+++++
T Consensus 242 ~~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~ 318 (481)
T 3czh_A 242 RK---PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM 318 (481)
T ss_dssp CC---TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred cC---CCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Confidence 42 12346899999875321 0 012222 2237899999999999999999999999999999999999999
Q ss_pred cCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 010612 337 GRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPER 416 (506)
Q Consensus 337 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R 416 (506)
++++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|||
T Consensus 319 ~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR 398 (481)
T 3czh_A 319 GPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 398 (481)
T ss_dssp CSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGG
T ss_pred CCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCc
Confidence 98788999999999999999999999999999766799999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeec
Q 010612 417 FFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQ 496 (506)
Q Consensus 417 ~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (506)
|++++... .....++|||+|+|.|+|++||.+|++++++.|+++|+++++++. +.+.....|+...| .+..++++
T Consensus 399 ~l~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~p-~~~~~~~~ 473 (481)
T 3czh_A 399 FLDSSGYF-AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL---VPDLKPRLGMTLQP-QPYLICAE 473 (481)
T ss_dssp GBCTTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGC---CCCCCCCSSSSCCC-CCCCBEEE
T ss_pred eeCCCCCC-cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCC---CCCcccCCCceecC-CceEEEEE
Confidence 99754321 345679999999999999999999999999999999999986552 22333345666666 47889999
Q ss_pred cCCCCC
Q 010612 497 PRLPIH 502 (506)
Q Consensus 497 ~r~~~~ 502 (506)
+|++-|
T Consensus 474 ~~~~~~ 479 (481)
T 3czh_A 474 RRHHHH 479 (481)
T ss_dssp ECC---
T ss_pred eccccc
Confidence 998765
No 11
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=6e-76 Score=583.11 Aligned_cols=445 Identities=29% Similarity=0.429 Sum_probs=348.5
Q ss_pred ccCCCCCCCCCCCCCceeecCcCC-CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCC
Q 010612 29 RCRRNLNLPPGPCPWPIIGNLNLM-GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTA 107 (506)
Q Consensus 29 ~~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~ 107 (506)
+..++.+.||||++ ++.+ .++++..+.+++++|||||++++|+.++++|+||+++++++.++...|.+++...
T Consensus 23 ~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~ 96 (496)
T 3qz1_A 23 WKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96 (496)
T ss_dssp ------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred hhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence 33566789999987 4444 6789999999999999999999999999999999999999998887888776554
Q ss_pred CcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 010612 108 AGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISR 187 (506)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~ 187 (506)
.......+..+++++.+|+.|+++||.+ .++|+.+.++.+.+.+.++++++++.+.+..++++|+.+++..+++|+|+.
T Consensus 97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~ 175 (496)
T 3qz1_A 97 SYKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICY 175 (496)
T ss_dssp TTTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTT
T ss_pred hHHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence 3333322222434444499999999998 588887778889999999999999999876678999999999999999999
Q ss_pred HhhccccccccccCCCChHHHHHHHHHHHHhhcc--ccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010612 188 MVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGV--LEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKR 265 (506)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 265 (506)
++||. . .+ .....+.+.++.+...... ..+...+|++.+++. ...++..+..+.+.+++.+.++++++..
T Consensus 176 ~~fG~-~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (496)
T 3qz1_A 176 LTFGN-K--ED----TLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHKESM 247 (496)
T ss_dssp TSTTC-C--CH----HHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HhcCC-C--CC----hHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99998 1 11 1113344444333322221 223445677665532 3456778888899999999999888765
Q ss_pred cCCCCCCcccHHHHHHhccCCCc--------cccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 010612 266 KSSTGFVASDMVDVLLQLADDPT--------LEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVI 336 (506)
Q Consensus 266 ~~~~~~~~~dll~~ll~~~~~~~--------~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~ 336 (506)
.. ....|+++.+++...+.. .++.+. ...++++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus 248 ~~---~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~ 324 (496)
T 3qz1_A 248 VA---GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDREL 324 (496)
T ss_dssp CS---SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cC---CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence 32 345689999998654321 111222 227899999999999999999999999999999999999999
Q ss_pred cC----CCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 010612 337 GR----NRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEF 412 (506)
Q Consensus 337 ~~----~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f 412 (506)
++ ++.+ .+++++||||+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 325 ~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F 403 (496)
T 3qz1_A 325 GPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEF 403 (496)
T ss_dssp CSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred CCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccC
Confidence 87 4556 899999999999999999999999987789999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccc--cCCCCCCCCC
Q 010612 413 RPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEES--FGLSTPKKIP 490 (506)
Q Consensus 413 ~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 490 (506)
+||||++++. ...++|||.|+|.|+|++||++|++++++.|+++|+|+++++.. +.++... .+++..|+ +
T Consensus 404 ~PeR~l~~~~-----~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~-~ 475 (496)
T 3qz1_A 404 RPDRFLEPGA-----NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGA--LPSLQPDPYCGVNLKVQ-P 475 (496)
T ss_dssp CCCCCC---C-----CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCC--CCCSCCSCCCSSCCCCC-C
T ss_pred CcccccCCCC-----CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCC--CCCCCcccCcceEecCC-c
Confidence 9999997541 22789999999999999999999999999999999999875532 2333333 57777775 8
Q ss_pred ceEeeccCCC
Q 010612 491 LLVVPQPRLP 500 (506)
Q Consensus 491 ~~~~~~~r~~ 500 (506)
+.|++++|+.
T Consensus 476 ~~v~~~~R~~ 485 (496)
T 3qz1_A 476 FQVRLQPRGV 485 (496)
T ss_dssp CCCCCCCC--
T ss_pred eEEEEEEecc
Confidence 9999999973
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=2e-75 Score=577.89 Aligned_cols=456 Identities=27% Similarity=0.473 Sum_probs=356.3
Q ss_pred CCCCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK 110 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 110 (506)
.++...+|||+++|++||++.+.++++..+.+++++|||||++++|+.++++++||+++++++.++...|.+++......
T Consensus 12 ~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~ 91 (495)
T 2hi4_A 12 PKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST 91 (495)
T ss_dssp CTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred CCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence 33444559999999999998888889999999999999999999999999999999999999988766777665332111
Q ss_pred eeeccCcceEec-cCChhHHHHHHHHhhccCC---hhhh---h---hhHHHHHHHHHHHHHHHHh--cCCCceehHHHHH
Q 010612 111 YTTYNYSDMVWA-TYGPYWRQARKIFLIEIFS---PKRL---E---SFEFIRVQEIKKFLFGLYK--SSAKPVHLKDHLS 178 (506)
Q Consensus 111 ~~~~~~~~~~~~-~~g~~w~~~R~~l~~~~f~---~~~l---~---~~~~~~~~~~~~~~~~l~~--~~~~~vdl~~~~~ 178 (506)
... ++.+++++ .+|+.|+++||++ .++|+ .... + .+.+.+.++++++++.+.+ .+++++|+.+++.
T Consensus 92 ~~~-~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~ 169 (495)
T 2hi4_A 92 LIT-DGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV 169 (495)
T ss_dssp TST-TSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred Hhc-CCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence 111 12233444 3699999999998 46543 3333 2 6889999999999999976 3577899999999
Q ss_pred HHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 010612 179 KLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVL 258 (506)
Q Consensus 179 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 258 (506)
.+++|+|+.++||.+++..+ .....+.+.++.+............+|++.+++ ....++..+..+.+.+++.+.+
T Consensus 170 ~~~~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i 244 (495)
T 2hi4_A 170 VSVANVIGAMCFGQHFPESS----DEMLSLVKNTHEFVETASSGNPLDFFPILRYLP-NPALQRFKAFNQRFLWFLQKTV 244 (495)
T ss_dssp HHHHHHHHHHHHGGGSCTTC----HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcC-chHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999886433 112333334444443332222445677765442 2334567778888999999999
Q ss_pred HHhhhhccCCCCCCcccHHHHHHhccCC----C---ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHH
Q 010612 259 HEHNAKRKSSTGFVASDMVDVLLQLADD----P---TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATK 330 (506)
Q Consensus 259 ~~~~~~~~~~~~~~~~dll~~ll~~~~~----~---~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~ 330 (506)
+++++.... ....|+++.+++...+ . -.++.+ .....+++||+|||+++++|++++|++||++|+|+++
T Consensus 245 ~~r~~~~~~---~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~ 321 (495)
T 2hi4_A 245 QEHYQDFDK---NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQK 321 (495)
T ss_dssp HHHHHTCCT---TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHhhcc---cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 988876421 2346899999854211 0 011222 2227899999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCC
Q 010612 331 ELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPN 410 (506)
Q Consensus 331 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~ 410 (506)
|+++++++++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||+
T Consensus 322 Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 401 (495)
T 2hi4_A 322 ELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPS 401 (495)
T ss_dssp HHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTT
T ss_pred HHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcC
Confidence 99999998778999999999999999999999999999767799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCC--CCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCC
Q 010612 411 EFRPERFFGKEIDV--KGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKK 488 (506)
Q Consensus 411 ~f~P~R~l~~~~~~--~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (506)
+|+||||++++... ...+..++|||+|+|.|+|++||++|++++++.|+++|+++++++. +.++....+++..|.
T Consensus 402 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~ 478 (495)
T 2hi4_A 402 EFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV---KVDLTPIYGLTMKHA 478 (495)
T ss_dssp SCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTC---CCCCCCBCSSSCBCC
T ss_pred ccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCC---CCCccccCCceecCC
Confidence 99999999754321 1235578999999999999999999999999999999999987653 233444557777776
Q ss_pred CCceEeeccCCC
Q 010612 489 IPLLVVPQPRLP 500 (506)
Q Consensus 489 ~~~~~~~~~r~~ 500 (506)
.-+.|+++ |.+
T Consensus 479 ~~~~v~~~-R~~ 489 (495)
T 2hi4_A 479 RCEHVQAR-RFS 489 (495)
T ss_dssp CCCCBEEE-CCC
T ss_pred CcceEEEE-Ecc
Confidence 43378888 864
No 13
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=2.2e-75 Score=580.18 Aligned_cols=448 Identities=20% Similarity=0.252 Sum_probs=348.6
Q ss_pred cccCCCCCCCCCCCCCceeecCcCCCC----CChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCC
Q 010612 28 SRCRRNLNLPPGPCPWPIIGNLNLMGS----LPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASR 103 (506)
Q Consensus 28 ~~~~~~~~~ppgp~~~p~~G~~~~~~~----~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 103 (506)
.+.+++.+.||||+++|++||++.+.+ .++..+.+++++|||||++++|+.++++++||+++++++.++ .|.++
T Consensus 38 ~~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r 115 (503)
T 3s79_A 38 VWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSR 115 (503)
T ss_dssp -------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCC
T ss_pred HHHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCc
Confidence 344456689999999999999988743 345678899999999999999999999999999999999643 45555
Q ss_pred CCCCCc-ceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHH
Q 010612 104 PRTAAG-KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS--SAKPVHLKDHLSKL 180 (506)
Q Consensus 104 ~~~~~~-~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~ 180 (506)
+..... .....++.+.++..+|+.|+++||.+ .++|+...++.+.+.+.++++++++.+.+. .++++|+.+++..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~ 194 (503)
T 3s79_A 116 FGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRV 194 (503)
T ss_dssp CCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHH
T ss_pred chhhhhhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHH
Confidence 432211 11122234556677899999999998 589999999999999999999999888763 46789999999999
Q ss_pred HHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 010612 181 SLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHE 260 (506)
Q Consensus 181 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 260 (506)
++++++.++||.+++..+ ....+.+.++.+..... ....+..+ ....++..+..+.+.+++.+.+++
T Consensus 195 ~~~vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ 261 (503)
T 3s79_A 195 MLDTSNTLFLRIPLDESA-----IVVKIQGYFDAWQALLI---KPDIFFKI-----SWLYKKYEKSVKDLKDAIEVLIAE 261 (503)
T ss_dssp HHHHHHHHHTCCCCCHHH-----HHHHHHHHHHHHHHHTT---CCHHHHHS-----GGGTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCchh-----HHHHHHHHHHHHHHHhc---CcHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999885211 11222222222222111 01111111 111355677788888999999988
Q ss_pred hhhhccCCC-CCCcccHHHHHHhccCCCc-cccchhhh-hhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhc
Q 010612 261 HNAKRKSST-GFVASDMVDVLLQLADDPT-LEFKLERD-QDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIG 337 (506)
Q Consensus 261 ~~~~~~~~~-~~~~~dll~~ll~~~~~~~-~~~~~~~~-~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~ 337 (506)
+++....+. .....|+++.+++...+.. .++.+... ..+++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus 262 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~ 341 (503)
T 3s79_A 262 KRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG 341 (503)
T ss_dssp HHHHHHTCTTTTTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred HHHHhhcccccchHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 887654322 1234589999997653322 12233333 77999999999999999999999999999999999999998
Q ss_pred CCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCC
Q 010612 338 RNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERF 417 (506)
Q Consensus 338 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~ 417 (506)
++.++.+++++||||+|||+|+||++|+++... |.+.+|++++||.||||+.|.++.+++||| ++|+||++|+||||
T Consensus 342 -~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf 418 (503)
T 3s79_A 342 -ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENF 418 (503)
T ss_dssp -TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEE-EECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGG
T ss_pred -CCCCCHHHHhcCHHHHHHHHhhhccCCCccccc-ccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhc
Confidence 568899999999999999999999999999876 999999999999999999999999999999 99999999999999
Q ss_pred CCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCC---ceEe
Q 010612 418 FGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIP---LLVV 494 (506)
Q Consensus 418 l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 494 (506)
+++. ....++|||+|+|.|+|++||.+|++++++.|+++|+|+++++.. ..+.....+++..|+.+ +.|+
T Consensus 419 ~~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~v~ 491 (503)
T 3s79_A 419 AKNV-----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQC--VESIQKIHDLSLHPDETKNMLEMI 491 (503)
T ss_dssp SSCC-----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCC--TTTSCEEESSSEEECTTSCCCCEE
T ss_pred CCCC-----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCC--ccccccccceeecCCCccceeeEE
Confidence 9642 344789999999999999999999999999999999999887642 23455556888888776 9999
Q ss_pred eccCCCC
Q 010612 495 PQPRLPI 501 (506)
Q Consensus 495 ~~~r~~~ 501 (506)
+++|+++
T Consensus 492 ~~~R~~~ 498 (503)
T 3s79_A 492 FTPRNSD 498 (503)
T ss_dssp EEECC--
T ss_pred eccCCch
Confidence 9999865
No 14
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=6.9e-76 Score=576.21 Aligned_cols=443 Identities=19% Similarity=0.284 Sum_probs=353.2
Q ss_pred CCCCCCCCCC-CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcce
Q 010612 33 NLNLPPGPCP-WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKY 111 (506)
Q Consensus 33 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (506)
..+.||+|++ +|++||++.+.++++.++.++++||||||++++++.++++|+||+++++++.++...+..++.......
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 3567888876 899999999999999999999999999999999999999999999999999987776665543221111
Q ss_pred eeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhc
Q 010612 112 TTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLG 191 (506)
Q Consensus 112 ~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG 191 (506)
... +.++++..+|+.|+++|+.+ .++|+.+.++.+.+.+.++++++++.+.+ ++.+|+.+++..+++++++.++||
T Consensus 89 ~~~-g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~fG 164 (461)
T 3ld6_A 89 PVF-GKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHG 164 (461)
T ss_dssp HHH-CTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred ccC-CCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHHHcC
Confidence 112 24556677899999999998 68999999999999999999999888765 567999999999999999999999
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 010612 192 KNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGF 271 (506)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 271 (506)
.++..... ..+......+..... .....+|.+ + +.....+..++.+.+.+++.+.+++++... .
T Consensus 165 ~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-----~ 228 (461)
T 3ld6_A 165 KEIRSQLN------EKVAQLYADLDGGFS--HAAWLLPGW--L-PLPSFRRRDRAHREIKDIFYKAIQKRRQSQ-----E 228 (461)
T ss_dssp HHHHHTCC------HHHHHHHHHHHTTSS--HHHHHSCTT--S-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----C
T ss_pred cchhhhhh------hhhhhhhhhhhhhhh--hHHHhhhhh--c-cCcHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C
Confidence 98865432 344444333332211 111112221 1 223345667778888899999888877653 4
Q ss_pred CcccHHHHHHhccCCCcc---ccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCC-CCcCccc
Q 010612 272 VASDMVDVLLQLADDPTL---EFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRN-RLVEEKD 346 (506)
Q Consensus 272 ~~~dll~~ll~~~~~~~~---~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~ 346 (506)
..+|+++.|+++..++.. ++++ .....+++||+|||+++++|++++|++||++|+++++|+++++++. ..++.++
T Consensus 229 ~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~ 308 (461)
T 3ld6_A 229 KIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQ 308 (461)
T ss_dssp CCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHH
T ss_pred CCcchhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHH
Confidence 456899999987655421 1222 2227899999999999999999999999999999999999999874 4678889
Q ss_pred CCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 010612 347 IVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKG 426 (506)
Q Consensus 347 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~ 426 (506)
+++||||+|||+||||++|+++... |.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++.. ..
T Consensus 309 l~~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~-~~ 386 (461)
T 3ld6_A 309 LKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-SG 386 (461)
T ss_dssp HHTCHHHHHHHHHHHHHSCSCCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHH-HH
T ss_pred HHHHhhhhheeeeccccCCchhccc-cccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcc-cC
Confidence 9999999999999999999999765 999999999999999999999999999999999999999999999986532 22
Q ss_pred CccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCCCC
Q 010612 427 HDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLPIH 502 (506)
Q Consensus 427 ~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 502 (506)
.+..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++.. +.. ...+++..| .++.|++++|+.-|
T Consensus 387 ~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~---~~~-~~~~~~~~p-~~~~v~~~~Rss~~ 457 (461)
T 3ld6_A 387 EKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF---PTV-NYTTMIHTP-ENPVIRYKRRSTHH 457 (461)
T ss_dssp SSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC---CCB-CCSSSSCCB-SSCEEEEEECC---
T ss_pred CCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCC---Ccc-cccceEEcC-CceEEEEEECCCCC
Confidence 456799999999999999999999999999999999999987742 222 233455555 56789999998765
No 15
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=5.2e-74 Score=567.91 Aligned_cols=457 Identities=21% Similarity=0.267 Sum_probs=351.1
Q ss_pred cCCCCCCCCCCCCCceeecCcCC-----CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCC
Q 010612 30 CRRNLNLPPGPCPWPIIGNLNLM-----GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRP 104 (506)
Q Consensus 30 ~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~ 104 (506)
+.++.+.+|||++.|+. +++.+ .++++..+.+++++|||||++++|+.+.|+|+||+++++++.++ ..|++++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCC
Confidence 35667889999988876 66555 23667889999999999999999999999999999999999865 3566665
Q ss_pred CCCCcc-e-eeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc------CCCceehHHH
Q 010612 105 RTAAGK-Y-TTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS------SAKPVHLKDH 176 (506)
Q Consensus 105 ~~~~~~-~-~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~------~~~~vdl~~~ 176 (506)
...... . ...+...+++..+|+.|+++||.+...+|+.+.++.+.+.+.++++++++.+.+. +++++|+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~ 161 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD 161 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence 332111 0 0111234566778999999999985336999999999999999999999998763 2457999999
Q ss_pred HHHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccccccccc-ccccccccchHHHHHHHHHHHHHHHH
Q 010612 177 LSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIP-WLGFLDLQGHIKRMKALMKKLDRFYE 255 (506)
Q Consensus 177 ~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~ 255 (506)
+..+++|+|+.++||.+++..+.........+.+.+..++..... ...+| ++..+......+......+.+.+++.
T Consensus 162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 238 (487)
T 3n9y_A 162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFRTKTWKDHVAAWDVIFSKAD 238 (487)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999765432222223455555555443321 12233 22211122223444444555566666
Q ss_pred HHHHHhhhhccCC--CCCCcccHHHHHHhccCCCccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHH
Q 010612 256 LVLHEHNAKRKSS--TGFVASDMVDVLLQLADDPTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELD 333 (506)
Q Consensus 256 ~~i~~~~~~~~~~--~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~ 333 (506)
+.++++.+..+.. ......|+++.+++... .+.++.......+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 239 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~ 317 (487)
T 3n9y_A 239 IYTQNFYWELRQKGSVHHDYRGILYRLLGDSK-MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVL 317 (487)
T ss_dssp HHHHHHHHHHHHHCCCCSSCCCHHHHHHHSCS-SCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 6665544432211 12345789999997432 11122233348899999999999999999999999999999999999
Q ss_pred HHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 010612 334 RVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFR 413 (506)
Q Consensus 334 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~ 413 (506)
+++++++..+.+++++||||+|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+
T Consensus 318 ~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~ 396 (487)
T 3n9y_A 318 AARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 396 (487)
T ss_dssp HHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCC
T ss_pred HhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccCC
Confidence 999877767799999999999999999999999986 5699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceE
Q 010612 414 PERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLV 493 (506)
Q Consensus 414 P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (506)
||||++++. ......++|||.|+|.|+|++||++|++++++.|+++|+|+++++. +.....+.++.|+.++.|
T Consensus 397 PeR~l~~~~--~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~~~~~~~~~~p~~~~~~ 469 (487)
T 3n9y_A 397 PTRWLSKDK--NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS-----DVGTTFNLILMPEKPISF 469 (487)
T ss_dssp GGGGTCSCT--TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC-----CCCEEESSSEEESSCCCE
T ss_pred hhhcCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc-----ccccceeeeecCCCCcee
Confidence 999997543 2245678999999999999999999999999999999999987662 234445788899999999
Q ss_pred eeccCCC
Q 010612 494 VPQPRLP 500 (506)
Q Consensus 494 ~~~~r~~ 500 (506)
++++|+.
T Consensus 470 ~~~~r~~ 476 (487)
T 3n9y_A 470 TFWPFNQ 476 (487)
T ss_dssp EEEEC--
T ss_pred EEEECCc
Confidence 9999874
No 16
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=2.9e-73 Score=554.19 Aligned_cols=432 Identities=20% Similarity=0.278 Sum_probs=343.2
Q ss_pred CCCCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK 110 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 110 (506)
.++.+.||||+++|++||+..+..++. ++.+++++|||||++++++.+.++++||+++++++.++...|..........
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~ 86 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRI 86 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHH
T ss_pred CCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHHH
Confidence 455678999999999999988866777 8889999999999999888889999999999999987655554221100001
Q ss_pred eeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhh
Q 010612 111 YTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVL 190 (506)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~f 190 (506)
. .+ ...++..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.|.. ++++|+.+++..+++++++.++|
T Consensus 87 ~--~g-~~~l~~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~vi~~~~f 160 (444)
T 2ve3_A 87 L--LG-PNALATQMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGK--ANEVIWYPQLRRMTFDVAATLFM 160 (444)
T ss_dssp H--HC-TTSGGGCCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHH--SSEEEHHHHHHHHHHHHHHHHHT
T ss_pred H--hC-ccccccCCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcC--CCcEeHHHHHHHHHHHHHHHHHc
Confidence 1 12 2234556799999999998 68999999999999999999999999875 67899999999999999999999
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 010612 191 GKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTG 270 (506)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 270 (506)
| +....+ ..+.+.+..+...... +...+|. ...++..+..+.+.+++.+.++++++..
T Consensus 161 G-~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~~----- 218 (444)
T 2ve3_A 161 G-EKVSQN-------PQLFPWFETYIQGLFS--LPIPLPN-------TLFGKSQRARALLLAELEKIIKARQQQP----- 218 (444)
T ss_dssp C-HHHHSC-------TTHHHHHHHHHHHHSS--CCCCSTT-------SHHHHHHHHHHHHHHHHHHHHHHHHTSC-----
T ss_pred C-CCcccH-------HHHHHHHHHHHHHHhc--CCccCCC-------cHHHHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 9 432211 2233333333222111 1111221 1234566677888889999998887652
Q ss_pred CCcccHHHHHHhccCCCc---cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCccc
Q 010612 271 FVASDMVDVLLQLADDPT---LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKD 346 (506)
Q Consensus 271 ~~~~dll~~ll~~~~~~~---~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~ 346 (506)
....|+++.|++..++.. .++.+ .....+++||+|||+++++|++++|++||++|+++++|++.+++++ .++.++
T Consensus 219 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~ 297 (444)
T 2ve3_A 219 PSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAET 297 (444)
T ss_dssp CCCSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHH
T ss_pred CCccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhh
Confidence 335689999998654321 12222 2238899999999999999999999999999999999999998765 789999
Q ss_pred CCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 010612 347 IVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKG 426 (506)
Q Consensus 347 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~ 426 (506)
+.+||||+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++||||||++++.....
T Consensus 298 l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~ 376 (444)
T 2ve3_A 298 LKKMPYLDQVLQEVLRLIPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHN 376 (444)
T ss_dssp HTTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTS
T ss_pred hhcChHHHHHHHHHHhcCCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCC
Confidence 999999999999999999999975 4999999999999999999999999999999999999999999999975432233
Q ss_pred CccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccC
Q 010612 427 HDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPR 498 (506)
Q Consensus 427 ~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 498 (506)
.+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++. +.+ ...+.+..|+.++.|++++|
T Consensus 377 ~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~--~~~~~~~~~~~~l~v~~~~r 443 (444)
T 2ve3_A 377 PPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ---NLE--LVVTPSPRPKDNLRVKLHSL 443 (444)
T ss_dssp CTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC---CCC--EEESSSEEETTCCEEEEEEC
T ss_pred CCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC---Ccc--eeccccccCCCCceEEEEeC
Confidence 45569999999999999999999999999999999999987653 222 23456778889999999988
No 17
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=5.6e-73 Score=553.98 Aligned_cols=444 Identities=18% Similarity=0.286 Sum_probs=331.4
Q ss_pred CCCCCC-CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCccee
Q 010612 34 LNLPPG-PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYT 112 (506)
Q Consensus 34 ~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 112 (506)
.+.||| |.++|++||+..+..+++..+.+++++|||||++++++.++++|+||+++++++.+++..|+.++...... .
T Consensus 3 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~-~ 81 (455)
T 2cib_A 3 AVALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT-P 81 (455)
T ss_dssp --CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH-H
T ss_pred CCCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH-h
Confidence 367887 88999999999888889999999999999999999999999999999999999987666666654332111 1
Q ss_pred eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhcc
Q 010612 113 TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGK 192 (506)
Q Consensus 113 ~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~ 192 (506)
..+ . .+. .+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+ ++++|+.+++..+++++++.++||.
T Consensus 82 ~~g-~-~~~-~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~ 155 (455)
T 2cib_A 82 IFG-E-GVV-FDASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGK 155 (455)
T ss_dssp HHC------------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred hcC-C-ccc-cCcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCC
Confidence 111 1 233 3689999999998 69999999999999999999999988654 4579999999999999999999999
Q ss_pred ccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 010612 193 NYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFV 272 (506)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~ 272 (506)
+++.... ..+...+..+.... ..+...+||+. ....++..++.+.+.+++.+.++++++.... ...
T Consensus 156 ~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~ 221 (455)
T 2cib_A 156 KFRDQLD------GRFAKLYHELERGT--DPLAYVDPYLP----IESFRRRDEARNGLVALVADIMNGRIANPPT--DKS 221 (455)
T ss_dssp HHHTTCC------HHHHHHHHHHHTTC--CGGGGTCTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred Ccchhhh------HHHHHHHHHHHhhh--hHHHHhcccCC----ChhHHHHHHHHHHHHHHHHHHHHHHHhcccC--CCC
Confidence 9854321 34555555443211 11222345432 1223455667788888999999888765421 111
Q ss_pred cccHHHHHHhccCCCc----cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccC
Q 010612 273 ASDMVDVLLQLADDPT----LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDI 347 (506)
Q Consensus 273 ~~dll~~ll~~~~~~~----~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l 347 (506)
..|+++.|++...+.+ .++.+ .....+++||+|||+++++|++++|++||++|+|+++|+++++++++.++.+++
T Consensus 222 ~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l 301 (455)
T 2cib_A 222 DRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301 (455)
T ss_dssp CCCHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTT
T ss_pred cccHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHH
Confidence 2399999998654321 11122 222789999999999999999999999999999999999999987778899999
Q ss_pred CCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 010612 348 VDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGH 427 (506)
Q Consensus 348 ~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~ 427 (506)
++||||+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++++......
T Consensus 302 ~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~ 380 (455)
T 2cib_A 302 RQIPQLENVLKETLRLHPPLIIL-MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLN 380 (455)
T ss_dssp SCCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHC
T ss_pred hcCHHHHHHHHHHHhcCCccccc-ceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccC
Confidence 99999999999999999999864 69999999999999999999999999999999999999999999999754221112
Q ss_pred ccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcc-cccCCCCCCCCCceEeeccCCCCCC
Q 010612 428 DFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDME-ESFGLSTPKKIPLLVVPQPRLPIHV 503 (506)
Q Consensus 428 ~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~ 503 (506)
+..++|||+|+|.|+|++||.+|++++++.|+++|+++++.+ +.++. ...+.+..|+.++.|++++|...|.
T Consensus 381 ~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~----~~~~~~~~~~~~~~p~~~~~v~~~~R~~~~~ 453 (455)
T 2cib_A 381 RWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP----PESYRNDHSKMVVQLAQPAAVRYRRRTGVHH 453 (455)
T ss_dssp TTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC----GGGCCEECSSSSCEECSCCEEEEEEC-----
T ss_pred CccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC----ccccccccccccccCCCCceEEEEECccccc
Confidence 457999999999999999999999999999999999998632 12221 1235566777799999999987664
No 18
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=4.9e-71 Score=542.22 Aligned_cols=442 Identities=19% Similarity=0.314 Sum_probs=342.3
Q ss_pred CCCCCCCCCCceeecCcCCC-CCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCccee
Q 010612 34 LNLPPGPCPWPIIGNLNLMG-SLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYT 112 (506)
Q Consensus 34 ~~~ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 112 (506)
.+.||||+++|++||++.+. ++++..+.+++++|||||++++++.+.++|+||+++++++.++ .|.+..........
T Consensus 2 ~~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~ 79 (470)
T 2ij2_A 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVR 79 (470)
T ss_dssp -CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHH
T ss_pred CCCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHH
Confidence 35789999999999998884 5778889999999999999999999999999999999999642 34321110000000
Q ss_pred eccCcceEec-cCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHHHHhh
Q 010612 113 TYNYSDMVWA-TYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS-SAKPVHLKDHLSKLSLNVISRMVL 190 (506)
Q Consensus 113 ~~~~~~~~~~-~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~vdl~~~~~~~~~~vi~~~~f 190 (506)
...+.+++.. .+|+.|+++||.+ .++|+++.++.+.+.+.++++++++.+.+. +++++|+.+++..+++|+|+.++|
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f 158 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF 158 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence 1111233333 4799999999998 689999999999999999999999998764 456899999999999999999999
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 010612 191 GKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTG 270 (506)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 270 (506)
|.+++.... .....+...+...+........ ..|++.++ +....+...+..+.+.+++.+.++++++..
T Consensus 159 G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----- 227 (470)
T 2ij2_A 159 NYRFNSFYR---DQPHPFITSMVRALDEAMNKLQ--RANPDDPA-YDENKRQFQEDIKVMNDLVDKIIADRKASG----- 227 (470)
T ss_dssp SCCCCGGGC---SSCCHHHHHHHHHHHHHHHTC-----CTTSGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCccccccc---CCCCHHHHHHHHHHHHHHHHHh--hhhhHhhc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 999875421 1123444444444332211110 11333222 222345566777888889999998887653
Q ss_pred CCcccHHHHHHhccCCCc----cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcc
Q 010612 271 FVASDMVDVLLQLADDPT----LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEK 345 (506)
Q Consensus 271 ~~~~dll~~ll~~~~~~~----~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~ 345 (506)
....|+++.|++..++.. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|+++++++ +.++.+
T Consensus 228 ~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~ 306 (470)
T 2ij2_A 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYK 306 (470)
T ss_dssp CCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHH
T ss_pred cCchhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCHH
Confidence 234689999998654211 12222 223789999999999999999999999999999999999999986 458999
Q ss_pred cCCCChhHHHHHHHhhccCCCCccccceeeccceeEec-eeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCCC
Q 010612 346 DIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAG-YDIPKNTRVLVNVWAIGRDPTIW-ENPNEFRPERFFGKEID 423 (506)
Q Consensus 346 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~R~l~~~~~ 423 (506)
++++||||+|||+|+||++|+++.. +|.+.+|++++| |.||||+.|.++.+++||||++| +||++|+|||| ++ .
T Consensus 307 ~~~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~--~ 382 (470)
T 2ij2_A 307 QVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN--P 382 (470)
T ss_dssp HHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS--G
T ss_pred HHhCCHHHHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC--C
Confidence 9999999999999999999999975 599999999999 99999999999999999999999 99999999999 32 1
Q ss_pred CCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 424 VKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 424 ~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
.......++|||+|+|.|+|++||.+|++++++.|+++|+|+ .++. .++....+++..|. ++.|++++|..
T Consensus 383 ~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~----~~~~~~~~~~~~p~-~~~v~~~~R~~ 453 (470)
T 2ij2_A 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTN----YELDIKETLTLKPE-GFVVKAKSKKI 453 (470)
T ss_dssp GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTC----CCCCEEESSSEEET-TCEEEEEECCC
T ss_pred CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCC----CccccccceEecCC-CeEEEEEEccC
Confidence 122346789999999999999999999999999999999998 3221 23334456777787 99999999864
No 19
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1.4e-71 Score=545.27 Aligned_cols=439 Identities=17% Similarity=0.257 Sum_probs=354.3
Q ss_pred CCCCCCCCCC-CceeecCcCCCCCChHHHHHHHhhcC-CeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcc
Q 010612 33 NLNLPPGPCP-WPIIGNLNLMGSLPHRSIHSLSQKYG-PIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK 110 (506)
Q Consensus 33 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~ 110 (506)
+.+.||||++ +|++||++.+.++++.++.+++++|| +||++++++.++++|+||+++++++.++...+.+++......
T Consensus 1 ~~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 80 (450)
T 3gw9_A 1 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV 80 (450)
T ss_dssp CCSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH
T ss_pred CCCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH
Confidence 3578899665 99999999998889999999999999 999999999999999999999999998877777665433221
Q ss_pred eeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHH-HHHhcCCCceehHHHHHHHHHHHHHHHh
Q 010612 111 YTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLF-GLYKSSAKPVHLKDHLSKLSLNVISRMV 189 (506)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~vdl~~~~~~~~~~vi~~~~ 189 (506)
.. . +.+.++..+++.|+++|+.+ .++|+.+.++.+.+.+.++++++++ .+.+ .++++|+.+++..+++++++.++
T Consensus 81 ~~-~-g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~ 156 (450)
T 3gw9_A 81 PV-F-GEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK-DEGEINLLEDCSTMIINTACQCL 156 (450)
T ss_dssp HH-H-CTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HH-h-cCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHHHHHHHH
Confidence 11 1 23445556799999999998 6899999999999999999999998 5542 45679999999999999999999
Q ss_pred hccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Q 010612 190 LGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSST 269 (506)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 269 (506)
||.++....+ ...+.+.+..+... .......+|++.+++ ....++..+..+.+.+++.+.++++++.... .
T Consensus 157 fG~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~P~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~ 227 (450)
T 3gw9_A 157 FGEDLRKRLD-----ARRFAQLLAKMESS--LIPAAVFLPILLKLP-LPQSARCHEARTELQKILSEIIIARKEEEVN-K 227 (450)
T ss_dssp SCHHHHHHSC-----HHHHHHHHHHHHHT--CCGGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred cCcchhhhhh-----hHHHHHHHHHHHhc--cccchhcccchhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-c
Confidence 9998864331 24555555554332 223344577775543 2345567778888999999999888764321 1
Q ss_pred CCCcccHHHHHHhccCCCc---cccchh-hhhhhHhccccchHHHHHHHHHHHh--hCchHHHHHHHHHHHHhcCCCCcC
Q 010612 270 GFVASDMVDVLLQLADDPT---LEFKLE-RDQDLLAGGTESSTVTLEWAISELM--KKPEIFDKATKELDRVIGRNRLVE 343 (506)
Q Consensus 270 ~~~~~dll~~ll~~~~~~~---~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~--~~p~~q~~l~~Ei~~~~~~~~~~~ 343 (506)
+....|+++.+++...+.. .++.+. ....+++||+|||+++++|++++|+ .||++|+++++|++++ ++.++
T Consensus 228 ~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~ 304 (450)
T 3gw9_A 228 DSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLN 304 (450)
T ss_dssp SCCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCC
T ss_pred CCccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCC
Confidence 2446799999998764332 122222 2378999999999999999999999 9999999999999987 45678
Q ss_pred cccC-CCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCC
Q 010612 344 EKDI-VDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEI 422 (506)
Q Consensus 344 ~~~l-~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~ 422 (506)
.+++ ++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||+.
T Consensus 305 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~---- 379 (450)
T 3gw9_A 305 YNNVMDEMPFAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE---- 379 (450)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC----
T ss_pred hHHHHHhcHHHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc----
Confidence 8888 99999999999999999999875 59999999999999999999999999999999999999999999931
Q ss_pred CCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCC-CCceEeeccCC
Q 010612 423 DVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKK-IPLLVVPQPRL 499 (506)
Q Consensus 423 ~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~ 499 (506)
.....++|||+|+|.|+|++||.+|++++++.|+++|+|+++++.. .+.. ..+....|+ .++.|++++|+
T Consensus 380 ---~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~-~~~~~~~p~~~~~~v~~~~R~ 450 (450)
T 3gw9_A 380 ---KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV---PDPD-YHTMVVGPTASQCRVKYIRRK 450 (450)
T ss_dssp ---SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSC---CCEE-TTSSSCEECGGGCEEEEEECC
T ss_pred ---CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCC---CCCc-cccceecCCCCceEeEeeecC
Confidence 1245789999999999999999999999999999999999875531 1222 235666777 89999999985
No 20
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=5.7e-70 Score=534.18 Aligned_cols=427 Identities=21% Similarity=0.314 Sum_probs=336.6
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCC--Ccceee--ccCcceEeccCChhH
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTA--AGKYTT--YNYSDMVWATYGPYW 128 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~g~~w 128 (506)
++.++..+.+|+++|||||++++|+.+.++|+||+++++++.++ .+.+++... .....+ ..+.+.++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 45678889999999999999999999999999999999999743 233322110 000000 112344455679999
Q ss_pred HHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHHHHHHHHHHhhccccccccccCCCChH
Q 010612 129 RQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS--SAKPVHLKDHLSKLSLNVISRMVLGKNYTEETEQDFVTPQ 206 (506)
Q Consensus 129 ~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 206 (506)
+++||.+ .++|+.+.++.+.+.+.++++.+++.+.+. +++++|+.+++..+++|+++.++||.+++.... ...
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~----~~~ 161 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG----AQK 161 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT----CCH
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc----ccc
Confidence 9999998 689999999999999999999999999875 456899999999999999999999999976542 123
Q ss_pred HHHHHHHHHHHhhccccccccccccccccc-cchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 207 EYTEMLQELFYLNGVLEIGDSIPWLGFLDL-QGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
.+...+..+....... ..|++.+++. ....+...+..+.+.+++.+.++++++..+.+ .....|+++.+++...
T Consensus 162 ~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~~~d~l~~ll~~~~ 236 (456)
T 3mdm_A 162 PLSQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG-EEVPADILTQILKAEE 236 (456)
T ss_dssp HHHHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhHHHHHHHhcC
Confidence 4444444443322210 0122222211 11234456667777888888888887665432 2335699999998653
Q ss_pred CCccccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccC
Q 010612 286 DPTLEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLH 364 (506)
Q Consensus 286 ~~~~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~ 364 (506)
....++.+. ....+++||+|||+++++|++++|++||++|+|+++|+++++++++.++.+++.+||||+|||+|+||++
T Consensus 237 ~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~ 316 (456)
T 3mdm_A 237 GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLY 316 (456)
T ss_dssp SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhC
Confidence 322233333 3388999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred CCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcch
Q 010612 365 PVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGY 444 (506)
Q Consensus 365 ~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~ 444 (506)
|+++... |.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++++ ......++|||+|+|.|+|+
T Consensus 317 p~~~~~~-r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~---~~~~~~~~pFg~G~r~C~G~ 392 (456)
T 3mdm_A 317 PPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA---PKPRFTYFPFSLGHRSCIGQ 392 (456)
T ss_dssp CSSCCEE-EEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTS---CCCSSSCCTTCCGGGSCTTH
T ss_pred CCccccc-cccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCC---CCCCCcccCCCCCCcCCCCH
Confidence 9999665 9999999999999999999999999999999999999999999999754 22455789999999999999
Q ss_pred hhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 445 DLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 445 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
+||++|++++++.|+++|+|+++++. +.+. ..+.++.|+.++.|++++|..
T Consensus 393 ~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~p~~~~~~~~~~r~~ 443 (456)
T 3mdm_A 393 QFAQMEVKVVMAKLLQRLEFRLVPGQ---RFGL--QEQATLKPLDPVLCTLRPRGW 443 (456)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEECTTC---CCCE--EESSSEEESSCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCeEEeCCCC---ccee--ecceEEecCCCeEEEEEEcCC
Confidence 99999999999999999999988663 2333 345677899999999999863
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=3e-71 Score=544.26 Aligned_cols=437 Identities=21% Similarity=0.329 Sum_probs=325.9
Q ss_pred CCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccc-cCCCCCCCccee
Q 010612 34 LNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANF-ASRPRTAAGKYT 112 (506)
Q Consensus 34 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~-~~~~~~~~~~~~ 112 (506)
...||||+++|++||++.+.++++.++.++++ |||||++++++.++++|+||+++++++.++ .| .+.+......
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~-- 96 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE-- 96 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH--
Confidence 56789999999999999998899999999988 999999999999999999999999999876 44 2222111111
Q ss_pred eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhcc
Q 010612 113 TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGK 192 (506)
Q Consensus 113 ~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~ 192 (506)
...+...++..+|+.|+++|+.+ .++|+.+.++.+.+.+.++++++++.+.+ ++++|+.+++..+++++++.++||.
T Consensus 97 ~~~g~~~l~~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~vi~~~~~g~ 173 (467)
T 3dbg_A 97 GLLGKEGVATANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQP--GKTVDATSESFRVAVRVAARCLLRG 173 (467)
T ss_dssp -------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCT--TSCEEHHHHHHHHHHHHHHHHHSCS
T ss_pred HhcCCCCcccCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhcc--CCcCcHHHHHHHHHHHHHHHHHhCC
Confidence 11111346677899999999998 68999999999999999999999998865 7789999999999999999999999
Q ss_pred ccccccccCCCChHHHHHHHHHHHHhhccccccccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 010612 193 NYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPW--LGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTG 270 (506)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 270 (506)
+++... ...+...+..+..... ....+|+ +.++ +....++..+..+.+.+++.+.++++++..
T Consensus 174 ~~~~~~------~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----- 238 (467)
T 3dbg_A 174 QYMDER------AERLCVALATVFRGMY---RRMVVPLGPLYRL-PLPANRRFNDALADLHLLVDEIIAERRASG----- 238 (467)
T ss_dssp SCCHHH------HHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTCC-----
T ss_pred cccchh------HHHHHHHHHHHHHHHH---HHhccchhhhhhC-CChHhHHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 986422 1445555555443221 1223342 2222 122234566677788888888888877642
Q ss_pred CCcccHHHHHHhccCCCc---cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCccc
Q 010612 271 FVASDMVDVLLQLADDPT---LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKD 346 (506)
Q Consensus 271 ~~~~dll~~ll~~~~~~~---~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~ 346 (506)
....|+++.|++..++.. .++.+ .....+++||+|||+++++|++++|++||++|++|++|+++++++ +.++.++
T Consensus 239 ~~~~dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~ 317 (467)
T 3dbg_A 239 QKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFED 317 (467)
T ss_dssp SSCCSHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHH
T ss_pred CCchHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHH
Confidence 345699999998654321 12222 223789999999999999999999999999999999999999886 6789999
Q ss_pred CCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 010612 347 IVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKG 426 (506)
Q Consensus 347 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~ 426 (506)
+++||||+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++||||||++++.. ..
T Consensus 318 l~~l~yl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-~~ 395 (467)
T 3dbg_A 318 VRKLRHTGNVIVEAMRLRPAVWVL-TRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-NV 395 (467)
T ss_dssp HTTCHHHHHHHHHHHHHSCSCCCE-EEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT-TS
T ss_pred HhhCHHHHHHHHHHhhcCCCcccc-ceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc-cC
Confidence 999999999999999999999874 5999999999999999999999999999999999999999999999965322 22
Q ss_pred CccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCCCC
Q 010612 427 HDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLPIH 502 (506)
Q Consensus 427 ~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 502 (506)
....++|||+|+|.|+|++||.+|++++++.|+++|++++.++. +.....+++++|+ ++.++-.-|++-|
T Consensus 396 ~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~~~~~~~~~~p~-~l~~~~~~~~~~~ 465 (467)
T 3dbg_A 396 PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS-----NDAVRVGITLRPH-DLLVRPVARHHHH 465 (467)
T ss_dssp CTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-----EEEEEESSSEEEE-ECEEEEEECC---
T ss_pred CCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC-----CCccceeeEecCC-CCccchhhhhccc
Confidence 45678999999999999999999999999999999999988763 2344557888775 6777766676544
No 22
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=1e-70 Score=540.01 Aligned_cols=444 Identities=19% Similarity=0.290 Sum_probs=348.0
Q ss_pred CCCCCCCCC-CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 31 RRNLNLPPG-PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 31 ~~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
.++.+.||| |+++|++||++.+.++++.++.+++++|||||++++++.++++|++|+++++++.++...+.........
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 456688999 8999999999999888999999999999999999999999999999999999998776555432211111
Q ss_pred ceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHh
Q 010612 110 KYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMV 189 (506)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~ 189 (506)
..... +.+..+..+|+.|+++||++ .+.|+.+.++.+.+.+.++++++++.|.+ ++.+|+.+++..+++++++.++
T Consensus 87 ~~~~~-g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~~~ 162 (461)
T 3i3k_A 87 TTPVF-GKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCL 162 (461)
T ss_dssp HHHHH-CTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHH
T ss_pred hhhhc-CCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHHH
Confidence 01111 23445555789999999998 58899999999999999999999988765 4568999999999999999999
Q ss_pred hccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Q 010612 190 LGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSST 269 (506)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 269 (506)
||.++..... ..+.+.+..+..... .....+|. ++ +....++..+..+.+.+++.+.++++++..
T Consensus 163 ~G~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~P~--~l-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 227 (461)
T 3i3k_A 163 HGKEIRSQLN------EKVAQLYADLDGGFS--HAAWLLPG--WL-PLPSFRRRDRAHREIKDIFYKAIQKRRQSQ---- 227 (461)
T ss_dssp TCHHHHHTCC------HHHHHHHHHHHTTSS--HHHHHSCT--TS-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCC----
T ss_pred ccHhhhhHHH------HHHHHHHHHHHhccc--cchhhccc--cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 9988754321 334444333322111 11112331 11 122345667778888899999998887653
Q ss_pred CCCcccHHHHHHhccCCCc---cccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCC-CcCc
Q 010612 270 GFVASDMVDVLLQLADDPT---LEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNR-LVEE 344 (506)
Q Consensus 270 ~~~~~dll~~ll~~~~~~~---~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~-~~~~ 344 (506)
....|+++.+++...+.. .++.+. ....+++||+|||+++++|++++|++||++|+++++|++++++++. .++.
T Consensus 228 -~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~ 306 (461)
T 3i3k_A 228 -EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTY 306 (461)
T ss_dssp -CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred -cccccHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 345789999998764432 122222 2278999999999999999999999999999999999999998753 5688
Q ss_pred ccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCC
Q 010612 345 KDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDV 424 (506)
Q Consensus 345 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~ 424 (506)
+++.++|||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++..
T Consensus 307 ~~~~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~- 384 (461)
T 3i3k_A 307 DQLKDLNLLDRCIKETLRLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA- 384 (461)
T ss_dssp HHHHTCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHH-
T ss_pred HHHhcChHHHHHHHHHHhcCCCcccc-ccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCC-
Confidence 99999999999999999999999764 5999999999999999999999999999999999999999999999976432
Q ss_pred CCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 425 KGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 425 ~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
......++|||+|+|.|+|++||.+|++++++.|+++|+|+++++. .+... ...+...|++++.+.-.+..+
T Consensus 385 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~-~~~~~~~p~~~~~~~~~~~~~ 456 (461)
T 3i3k_A 385 SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY---FPTVN-YTTMIHTPENPVIRYKRRSTH 456 (461)
T ss_dssp HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC---CCCBC-CSSSSCCBSSCEEEEEECC--
T ss_pred CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCC---CCCcc-cceeecCCCCceEEeeccccc
Confidence 2235578999999999999999999999999999999999988773 22232 346677898888776655443
No 23
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=5.7e-68 Score=525.25 Aligned_cols=448 Identities=18% Similarity=0.243 Sum_probs=323.0
Q ss_pred cCCCCCCCCCCCC-CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhcc-ccccCCCCCC
Q 010612 30 CRRNLNLPPGPCP-WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHD-ANFASRPRTA 107 (506)
Q Consensus 30 ~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~-~~~~~~~~~~ 107 (506)
++++.+.||||++ +|++||+..+.++++.++.+++++||+||++++|+.++++|+||+++++++.++. ..+.......
T Consensus 8 ~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~ 87 (491)
T 3dax_A 8 RRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFAT 87 (491)
T ss_dssp CCCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHH
T ss_pred hccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHH
Confidence 3455678999988 7999999999888999999999999999999999999999999999999998654 2222211100
Q ss_pred CcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc-----CCCceehHHHHHHHHH
Q 010612 108 AGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS-----SAKPVHLKDHLSKLSL 182 (506)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-----~~~~vdl~~~~~~~~~ 182 (506)
.... .+ .+.+...+|+.|+++|+.+ .++|+.+.++.+.+.+.+.+.+.+...... ....+|+..++..+++
T Consensus 88 ~~~~--~g-~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~ 163 (491)
T 3dax_A 88 SAKA--FG-HRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMF 163 (491)
T ss_dssp HHHH--HT-CCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHH
T ss_pred HHHH--cC-CCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHH
Confidence 0001 11 1222245688899999987 478999999988888888877777554321 1235889999999999
Q ss_pred HHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 010612 183 NVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHN 262 (506)
Q Consensus 183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 262 (506)
++++.++||.++...+. ....+....+.+.. +...+|++....+....+...+..+.+.+.+ ++++.
T Consensus 164 ~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~ 230 (491)
T 3dax_A 164 EAGYLTIFGRDLTRRDT----QKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENL 230 (491)
T ss_dssp HHHHHHHHCBCSTTGGG----HHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHH
T ss_pred HHhHHHHcCcccccccc----hhhhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHh
Confidence 99999999988754321 11122222222211 1122343322111122233444444333322 12222
Q ss_pred hhccCCCCCCcccHHHHHHhccCCC--ccccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCC
Q 010612 263 AKRKSSTGFVASDMVDVLLQLADDP--TLEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRN 339 (506)
Q Consensus 263 ~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~ 339 (506)
+.. ....|+++.+++...+. ..++.+. ....+++||+|||+++++|++++|++||++|+|+++|++++++++
T Consensus 231 ~~~-----~~~~d~l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~ 305 (491)
T 3dax_A 231 QKR-----ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENA 305 (491)
T ss_dssp TTC-----BSCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTT
T ss_pred hcc-----cchhHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcc
Confidence 221 23468999887643211 1122333 347889999999999999999999999999999999999999764
Q ss_pred C----------CcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeE----eceeeCCCCEEEEehhhhccCCCC
Q 010612 340 R----------LVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKV----AGYDIPKNTRVLVNVWAIGRDPTI 405 (506)
Q Consensus 340 ~----------~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i----~g~~ip~G~~v~~~~~~~~~d~~~ 405 (506)
+ .++.+++++||||+|||+||||++|+ +. .+|.+.+|+++ +||.||||+.|+++.+++||||++
T Consensus 306 ~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~ 383 (491)
T 3dax_A 306 GQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEI 383 (491)
T ss_dssp TCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTT
T ss_pred ccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCccc
Confidence 3 35888999999999999999999975 54 46999999999 789999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCC--------CCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCc
Q 010612 406 WENPNEFRPERFFGKEIDVK--------GHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDM 477 (506)
Q Consensus 406 ~~~p~~f~P~R~l~~~~~~~--------~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~ 477 (506)
|+||++|+||||+++++..+ ..+..++|||+|+|.|+|++||++|+++++|.||++|+|+++++.. .+.++
T Consensus 384 ~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~ 462 (491)
T 3dax_A 384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA-KCPPL 462 (491)
T ss_dssp SSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTC-CCCCB
T ss_pred CCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCC-CCCCC
Confidence 99999999999997543211 2356799999999999999999999999999999999999876531 12333
Q ss_pred ccc-cC-CCCCCCCCceEeeccCCCCC
Q 010612 478 EES-FG-LSTPKKIPLLVVPQPRLPIH 502 (506)
Q Consensus 478 ~~~-~~-~~~~~~~~~~~~~~~r~~~~ 502 (506)
+.. .+ ...+|+.++.++++.+++-|
T Consensus 463 ~~~~~~~~~~~p~~~~~~~~r~~~~~~ 489 (491)
T 3dax_A 463 DQSRAGLGILPPLNDIEFKYKFKHHHH 489 (491)
T ss_dssp CGGGTBEEECCBSSCCEEEEEECCCC-
T ss_pred CcccccccccCCCCCceEEEEeccccc
Confidence 321 24 35688899999999887655
No 24
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=1e-67 Score=522.73 Aligned_cols=449 Identities=17% Similarity=0.224 Sum_probs=338.9
Q ss_pred ccCCCCCCCCCCCC-CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccc-cccCCCCC
Q 010612 29 RCRRNLNLPPGPCP-WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDA-NFASRPRT 106 (506)
Q Consensus 29 ~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~-~~~~~~~~ 106 (506)
.++++.+.||||++ +|++||++.+.++++.++.+++++|||||++++++.++++|+||+++++++.+++. .+..+...
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~ 86 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHH
Confidence 34566789999999 59999999999999999999999999999999999999999999999999976541 22222111
Q ss_pred CCcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc-----CCCceehHHHHHHHH
Q 010612 107 AAGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS-----SAKPVHLKDHLSKLS 181 (506)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-----~~~~vdl~~~~~~~~ 181 (506)
...... + .+.....+|+.|+++|+.+ .++|+++.++.+.+.+.+++.++++.+... ....+|+.+++..++
T Consensus 87 ~~~~~~--g-~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~ 162 (491)
T 3v8d_A 87 LSAKAF--G-HRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHH--T-CCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred HHHHhc--C-CcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence 111111 1 2334445699999999987 689999999999999999999888754222 234689999999999
Q ss_pred HHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHh
Q 010612 182 LNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEH 261 (506)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 261 (506)
+++++..+||.++...+. ....+.+.++.+..... .+|.+....+....++..++.+.+.+++.+.++++
T Consensus 163 ~~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~ 232 (491)
T 3v8d_A 163 FEAGYLTIFGRDLTRRDT----QKAHILNNLDNFKQFDK------VFPALVAGLPIHMFRTAHNAREKLAESLRHENLQK 232 (491)
T ss_dssp HHHHHHHHHCBCCSCGGG----HHHHHHHHHHHHHHHHH------HHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTT
T ss_pred HHHHHHHHcCccccccch----hhhhhHHHHHHHHHHHH------HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998764331 12334444444332211 22322221223334566666777766666555433
Q ss_pred hhhccCCCCCCcccHHHHHHhccCCCc--cccc-hhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC
Q 010612 262 NAKRKSSTGFVASDMVDVLLQLADDPT--LEFK-LERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGR 338 (506)
Q Consensus 262 ~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~-~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~ 338 (506)
++ ...|+++.++...++.. .+++ ......+++||++||+++++|++++|++||++|+++++|+++++++
T Consensus 233 ~~--------~~~d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~ 304 (491)
T 3v8d_A 233 RE--------SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLEN 304 (491)
T ss_dssp CB--------SCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred cc--------cccHHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhc
Confidence 21 24689998886543221 1222 2333889999999999999999999999999999999999999875
Q ss_pred C----------CCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeE----eceeeCCCCEEEEehhhhccCCC
Q 010612 339 N----------RLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKV----AGYDIPKNTRVLVNVWAIGRDPT 404 (506)
Q Consensus 339 ~----------~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i----~g~~ip~G~~v~~~~~~~~~d~~ 404 (506)
+ ..++.+++.++|||+|||+|+||++|+ +. .+|.+.+|+++ +|+.||||+.|.++.+++||||+
T Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~ 382 (491)
T 3v8d_A 305 AGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPE 382 (491)
T ss_dssp TTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTT
T ss_pred cccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcc
Confidence 3 356778888999999999999999974 33 35999999999 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCC--------CCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCC
Q 010612 405 IWENPNEFRPERFFGKEIDV--------KGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLD 476 (506)
Q Consensus 405 ~~~~p~~f~P~R~l~~~~~~--------~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~ 476 (506)
+|+||++|+||||++.+... ...+..|+|||+|+|.|+|++||.+|++++++.|+++|||+++++.. ..++
T Consensus 383 ~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~-~~~~ 461 (491)
T 3v8d_A 383 IYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA-KCPP 461 (491)
T ss_dssp TSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---C-CCCC
T ss_pred cCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCC-CCCC
Confidence 99999999999999765321 12356789999999999999999999999999999999999877632 2233
Q ss_pred cccc-cC-CCCCCCCCceEeeccCCCCC
Q 010612 477 MEES-FG-LSTPKKIPLLVVPQPRLPIH 502 (506)
Q Consensus 477 ~~~~-~~-~~~~~~~~~~~~~~~r~~~~ 502 (506)
.+.. .| ...+|+.++.|+++-.++-|
T Consensus 462 ~~~~~~~~~~~~p~~~i~v~~~~~~~~~ 489 (491)
T 3v8d_A 462 LDQSRAGLGILPPLNDIEFKYKFKHHHH 489 (491)
T ss_dssp BCGGGTBEEECCBSSCCEEEEEECSCC-
T ss_pred CCcccCcCcccCCCCCeEEEEEeccccc
Confidence 3332 23 46788999999999766544
No 25
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=5.8e-65 Score=492.45 Aligned_cols=402 Identities=18% Similarity=0.217 Sum_probs=303.5
Q ss_pred CCCCCCCCCCCCCceeecCc-CCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCCCC
Q 010612 31 RRNLNLPPGPCPWPIIGNLN-LMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRTAA 108 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~-~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~ 108 (506)
+++.+.||||+++|++|++. .+..+++..+.++ ++||||+++++ ++.++++++||+++++++.++ .|.+++....
T Consensus 22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 44567899999999999986 5677899999999 99999999998 788899999999999999866 4666543211
Q ss_pred ccee--eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHH
Q 010612 109 GKYT--TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVI 185 (506)
Q Consensus 109 ~~~~--~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi 185 (506)
.... .......++..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+..++++|+.+++ ..+++++|
T Consensus 99 ~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi 177 (436)
T 2cd8_A 99 TPLTEAEAALNHNMLESDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVI 177 (436)
T ss_dssp SCCCTTGGGTCCSGGGCCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHH
T ss_pred cccccccccccccccccCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 1110 01112345667899999999998 68999999999999999999999999985346789999977 57999999
Q ss_pred HHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010612 186 SRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKR 265 (506)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 265 (506)
+. +||.+... ...+....+.++.. . + + ++..+..+.+.+++.+.++++++..
T Consensus 178 ~~-~~G~~~~~--------~~~~~~~~~~~~~~------~---~------~----~~~~~~~~~~~~~~~~~i~~r~~~~ 229 (436)
T 2cd8_A 178 SE-LLGVPEPD--------RAAFRVWTDAFVFP------D---D------P----AQAQTAMAEMSGYLSRLIDSKRGQD 229 (436)
T ss_dssp HH-HHTCCGGG--------HHHHHHHHHHHHSC------S---S------T----THHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HH-HhCCCHHH--------HHHHHHHHHHHhcc------C---C------H----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 98 69987631 13444444443310 0 0 1 3455677788888888888876542
Q ss_pred cCCCCCCcccHHHHHHhccCC-C--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCC
Q 010612 266 KSSTGFVASDMVDVLLQLADD-P--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRL 341 (506)
Q Consensus 266 ~~~~~~~~~dll~~ll~~~~~-~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~ 341 (506)
.+|+++.|++...+ . -.++.+ .....+++||+|||+++++|++++|++||++|+|+++|+
T Consensus 230 -------~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~--------- 293 (436)
T 2cd8_A 230 -------GEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM--------- 293 (436)
T ss_dssp -------CCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------
T ss_pred -------CCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh---------
Confidence 35899999975432 1 112222 233889999999999999999999999999999999975
Q ss_pred cCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCC
Q 010612 342 VEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKE 421 (506)
Q Consensus 342 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~ 421 (506)
.||+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||-
T Consensus 294 ---------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--- 361 (436)
T 2cd8_A 294 ---------TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT--- 361 (436)
T ss_dssp ---------GGHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC---
T ss_pred ---------hhHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC---
Confidence 36999999999999999966679999999999999999999999999999999999999999999961
Q ss_pred CCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 422 IDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 422 ~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++..+. .++.+. .+..+.+..++.|++++|++
T Consensus 362 -------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~--~~~~~~~~~~l~v~~~~r~~ 430 (436)
T 2cd8_A 362 -------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSP--GELVWY--PNPMIRGLKALPIRWRRGRE 430 (436)
T ss_dssp -------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCG--GGCCBC--CCTTBCCBSCCEEC------
T ss_pred -------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCC--ccceec--cCcccCCcceeEEEEecCcc
Confidence 2589999999999999999999999999999999 69986432 223332 34555677899999999988
Q ss_pred CCC
Q 010612 501 IHV 503 (506)
Q Consensus 501 ~~~ 503 (506)
.+.
T Consensus 431 ~~~ 433 (436)
T 2cd8_A 431 AGR 433 (436)
T ss_dssp ---
T ss_pred ccc
Confidence 764
No 26
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=4.9e-66 Score=511.88 Aligned_cols=453 Identities=16% Similarity=0.149 Sum_probs=317.5
Q ss_pred cccCCCCCCCCCCCC-CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCC
Q 010612 28 SRCRRNLNLPPGPCP-WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRT 106 (506)
Q Consensus 28 ~~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~ 106 (506)
..++++.+.||||++ +|++||++.+.++++.++.+++++|||||++++|+.++++++||+++++++.++...+..++..
T Consensus 11 ~~~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~ 90 (498)
T 3b6h_A 11 RRRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYA 90 (498)
T ss_dssp --CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHH
T ss_pred HHhccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhH
Confidence 334556678999998 8999999988778899999999999999999999999999999999999998664312222111
Q ss_pred CCcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc---CCCceehHHHHHHHHHH
Q 010612 107 AAGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS---SAKPVHLKDHLSKLSLN 183 (506)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~vdl~~~~~~~~~~ 183 (506)
........+ .+ .+..+|+.|+ +.+ .++|+.+.++.+.+.+.+.+.+.+...... ....+++..++..++++
T Consensus 91 ~~~~~~~~g-~~-~~~~~~~~~r---r~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~ 164 (498)
T 3b6h_A 91 IFLMERIFD-VQ-LPHYSPSDEK---ARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLR 164 (498)
T ss_dssp HHHHHHTSC-CC-CTTCCHHHHH---HHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHH
T ss_pred HHHHHHHcC-CC-ccccCHHHHH---HHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHH
Confidence 000000111 12 2244566664 444 467888889888877777777777655322 22358999999999999
Q ss_pred HHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccccccccccccc-ccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 010612 184 VISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGF-LDLQGHIKRMKALMKKLDRFYELVLHEHN 262 (506)
Q Consensus 184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 262 (506)
+++.++||.+++..+.. ........+..+..... .+...+|++.. +......+...+..+.+.+.+ ++++.
T Consensus 165 ~~~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (498)
T 3b6h_A 165 AGYLTLYGIEALPRTHE---SQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPARL 236 (498)
T ss_dssp HHHHHHHCBSCSSCCHH---HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHHH
T ss_pred HHHHhhcCccccccccc---chhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHHH
Confidence 99999999987543210 00112222222222111 11223453321 111111223333333333222 22222
Q ss_pred hhccCCCCCCcccHHHHHHhccCCC--ccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCC
Q 010612 263 AKRKSSTGFVASDMVDVLLQLADDP--TLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNR 340 (506)
Q Consensus 263 ~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~ 340 (506)
++ .....|+++.+++..++. ..++.+...+.+++||+|||+++++|++++|++||++|+|+++|+++++++++
T Consensus 237 ~~-----~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~ 311 (498)
T 3b6h_A 237 AR-----RAHRSKWLESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAE 311 (498)
T ss_dssp TT-----CBSCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC--
T ss_pred hc-----cccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccC
Confidence 22 123468999988653321 12233344477889999999999999999999999999999999999998754
Q ss_pred -------CcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeE-----eceeeCCCCEEEEehhh-hccCCCCCC
Q 010612 341 -------LVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKV-----AGYDIPKNTRVLVNVWA-IGRDPTIWE 407 (506)
Q Consensus 341 -------~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~~ 407 (506)
.++.+++.+||||+|||+|+||++|+ +. .+|.+.+|+++ +||.||||+.|.++.++ +|+||++|+
T Consensus 312 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~ 389 (498)
T 3b6h_A 312 QPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYT 389 (498)
T ss_dssp --------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSS
T ss_pred CCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccC
Confidence 25889999999999999999999985 54 46999999998 78999999999999999 999999999
Q ss_pred CCCCCCCCCCCCCCCCCC--------CCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCccc
Q 010612 408 NPNEFRPERFFGKEIDVK--------GHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEE 479 (506)
Q Consensus 408 ~p~~f~P~R~l~~~~~~~--------~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~ 479 (506)
||++|+||||+++++..+ ..+..++|||+|+|.|+|++||.+|+++++|.|+++|||+++++.. .....+.
T Consensus 390 ~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~ 468 (498)
T 3b6h_A 390 DPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV-EIPEFDL 468 (498)
T ss_dssp STTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTC-CCCCBCG
T ss_pred ChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCC-CCCCCCc
Confidence 999999999997543211 1345799999999999999999999999999999999999876531 1222332
Q ss_pred --ccCCCCCCCCCceEeeccCCCCC
Q 010612 480 --SFGLSTPKKIPLLVVPQPRLPIH 502 (506)
Q Consensus 480 --~~~~~~~~~~~~~~~~~~r~~~~ 502 (506)
......+|+.++.+++++|.+-|
T Consensus 469 ~~~~~~~~~p~~~~~~~~~~~~~~~ 493 (498)
T 3b6h_A 469 SRYGFGLMQPEHDVPVRYRIRPHHH 493 (498)
T ss_dssp GGTBSSBCCBSSCCEEEEEECCC--
T ss_pred cccccccCCCCCCccEEEEeccccc
Confidence 22344688889999999988655
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=8.4e-64 Score=483.46 Aligned_cols=402 Identities=16% Similarity=0.242 Sum_probs=315.7
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcC-CeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEe
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYG-PIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVW 121 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (506)
.|++||+..+..+|+.++.+++++|| |||++.+++.+++++++|++++.++. + ..|...............+.+.++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l~ 85 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAIQ 85 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhcccccee
Confidence 48999999998899999999999998 89999999889999999999985543 2 334433211100000111123456
Q ss_pred ccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhccccccccccC
Q 010612 122 ATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 122 ~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
..+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.|.+ ++++|+.+++..+++++|+.+ ||.+++...
T Consensus 86 ~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~--- 158 (417)
T 1izo_A 86 GMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCRVACYW-AGVPLKETE--- 158 (417)
T ss_dssp GCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHHHHHHH-HTCCCCTTT---
T ss_pred ecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHHHHHHH-cCCCCCchH---
Confidence 77899999999998 68999999999999999999999999876 678999999999999999998 698875321
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLL 281 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll 281 (506)
...+.+.+..+...... ..| ......+..+.+.+++.+.|+++++.... ...+|+++.|+
T Consensus 159 ---~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~~~d~l~~ll 218 (417)
T 1izo_A 159 ---VKERADDFIDMVDAFGA-----VGP---------RHWKGRRARPRAEEWIEVMIEDARAGLLK---TTSGTALHEMA 218 (417)
T ss_dssp ---HHHHHHHHHHHHHHTTC-----CSH---------HHHHHHHHHHHHHHHHHHHHHHHHTTSSC---CCTTSHHHHHH
T ss_pred ---HHHHHHHHHHHHhhccc-----CCc---------cchhHHHHHHHHHHHHHHHHHHHHhhccC---CCcCCHHHHHH
Confidence 23444433333322110 011 12345567788889999999988775421 23468999999
Q ss_pred hccCCCc---cccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHH
Q 010612 282 QLADDPT---LEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVK 358 (506)
Q Consensus 282 ~~~~~~~---~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~ 358 (506)
...+..+ .++.+......++||++||+++++|++++|++||++|+++++| ++|||+|||+
T Consensus 219 ~~~~~~g~~l~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i~ 281 (417)
T 1izo_A 219 FHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQ 281 (417)
T ss_dssp HCBCTTSCBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHH
T ss_pred HhccccCCCCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHHH
Confidence 8654321 1222333455667999999999999999999999999999997 4799999999
Q ss_pred HhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC-
Q 010612 359 ETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAG- 437 (506)
Q Consensus 359 EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G- 437 (506)
|+||++|+++. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+ ..+..++|||+|
T Consensus 282 E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~~FG~G~ 356 (417)
T 1izo_A 282 EVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE----ENLFDMIPQGGGH 356 (417)
T ss_dssp HHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC----CCSSSCCTTCSSC
T ss_pred HHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC----CCCcceeCCCCCC
Confidence 99999999998 459999999999999999999999999999999999999999999999653 244579999999
Q ss_pred ---CCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 438 ---RRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 438 ---~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
+|.|+|++||.+|++++++.|+++|+|+++++. .... ...++..|+.++.+++++|.+
T Consensus 357 r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~r~~ 417 (417)
T 1izo_A 357 AEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS----LHYS-LARMPSLPESGFVMSGIRRKS 417 (417)
T ss_dssp TTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC----CCCC-SSSSSCCCTTCCEEEEEEEC-
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC----cCcc-cccCCCCCCCCceEeeeeCCC
Confidence 599999999999999999999999999987542 2222 235677899999999999864
No 28
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=6.5e-65 Score=501.19 Aligned_cols=439 Identities=17% Similarity=0.183 Sum_probs=302.8
Q ss_pred ccCCCCCCCCCCCC-CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCC
Q 010612 29 RCRRNLNLPPGPCP-WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTA 107 (506)
Q Consensus 29 ~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~ 107 (506)
.++++.+.||||++ +|++||++.+.++++.++.+++++|||||++++++.++++++||+++++++.++.. +.......
T Consensus 12 ~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~ 90 (475)
T 3b98_A 12 RRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ 90 (475)
T ss_dssp -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred hcccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence 33555678999998 89999999887889999999999999999999999999999999999999986542 22211100
Q ss_pred CcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcC----CCceehHHHHHHHHHH
Q 010612 108 AGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSS----AKPVHLKDHLSKLSLN 183 (506)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~----~~~vdl~~~~~~~~~~ 183 (506)
.......+ .+ .+..+++.| |+.+ .++|+.+.++.+.+.+.+++.++++.+.... ...+++..++..++++
T Consensus 91 ~~~~~~~g-~~-~~~~~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (475)
T 3b98_A 91 VLMKRIFN-MI-LPSHNPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK 164 (475)
T ss_dssp HHHHHTTC-CC-CTTCCHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred HHHHHHhC-CC-CCCCChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence 00000111 12 224456555 4555 5689999999999999999888887654321 1257888889999999
Q ss_pred HHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccccccccccccc-ccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 010612 184 VISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGF-LDLQGHIKRMKALMKKLDRFYELVLHEHN 262 (506)
Q Consensus 184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 262 (506)
+++...||.+.. ....+....+.+.... ..+|++.. +......+...+..+.+.+ .+.+..
T Consensus 165 ~~~~~~~g~~~~--------~~~~~~~~~~~~~~~~------~~~p~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 226 (475)
T 3b98_A 165 TGYLTVFGAENN--------NSAALTQIYEEFRRFD------KLLPKLARTTVNKEEKQIASAAREKLWK----WLTPSG 226 (475)
T ss_dssp HHHHHHHCCTTS--------CHHHHHHHHHHHHHHH------HHHHHHHTTCCCHHHHHHHHHHHHHHHH----HHSCTT
T ss_pred HhhhheeCCccc--------cchhcHHHHHHHHHHH------hhhHHHHHHhcChhhhHHHHHHHHHHHH----HHHHHH
Confidence 988888885421 1123333333322211 12343211 1111112222222222222 221111
Q ss_pred hhccCCCCCCcccHHHHHHhccCCC--ccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCC
Q 010612 263 AKRKSSTGFVASDMVDVLLQLADDP--TLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNR 340 (506)
Q Consensus 263 ~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~ 340 (506)
.. ......|+++.+++...+. ..++.+.....+++||+|||+++++|++++|++||++|+++++|++. + ..
T Consensus 227 ~~----~~~~~~d~l~~ll~~~~~~~~~~~~~i~~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~--~-~~ 299 (475)
T 3b98_A 227 LD----RKPREQSWLGSYVKQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--G-KH 299 (475)
T ss_dssp SC----CCCCTTSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-------
T ss_pred hh----ccccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--C-CC
Confidence 11 1234568999998653221 12333444478899999999999999999999999999999999982 2 33
Q ss_pred CcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeE-----eceeeCCCCEEEEehhh-hccCCCCCCCCCCCCC
Q 010612 341 LVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKV-----AGYDIPKNTRVLVNVWA-IGRDPTIWENPNEFRP 414 (506)
Q Consensus 341 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~f~P 414 (506)
.++.+++++||||+|||+|+||++|+ +. .+|.+.+|+++ +||.||||+.|+++.++ +||||++|+||++|||
T Consensus 300 ~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~P 377 (475)
T 3b98_A 300 LRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQF 377 (475)
T ss_dssp --------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCT
T ss_pred CCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCc
Confidence 46899999999999999999999986 54 56999999999 89999999999999999 9999999999999999
Q ss_pred CCCCCCCCCC--------CCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCccc-ccC-CC
Q 010612 415 ERFFGKEIDV--------KGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEE-SFG-LS 484 (506)
Q Consensus 415 ~R~l~~~~~~--------~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~-~~ 484 (506)
|||++++... ......++|||+|+|.|+|++||.+|++++++.|+++|+|+++++.. ....++. ..+ .+
T Consensus 378 eRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~ 456 (475)
T 3b98_A 378 DRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNA-TVPLVDPSRYGFGI 456 (475)
T ss_dssp TTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTC-CCCCBCGGGTBEEE
T ss_pred chhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCC-CCCCCCcccccccc
Confidence 9999754321 12346799999999999999999999999999999999999876531 1222222 123 45
Q ss_pred CCCCCCceEeeccCCCCC
Q 010612 485 TPKKIPLLVVPQPRLPIH 502 (506)
Q Consensus 485 ~~~~~~~~~~~~~r~~~~ 502 (506)
.+|+.++.+++++|..-|
T Consensus 457 ~~p~~~~~~~~~~R~~~~ 474 (475)
T 3b98_A 457 LQPAGDLEIRYRIRFHHH 474 (475)
T ss_dssp CCBSSCCEEEEEEC----
T ss_pred cCCCCCceEEEEeccccc
Confidence 678889999999998655
No 29
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=1.4e-62 Score=474.64 Aligned_cols=402 Identities=16% Similarity=0.228 Sum_probs=312.6
Q ss_pred CCCCCCCceeecCcCCCCCChHHHHHHHhhc-CCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeecc
Q 010612 37 PPGPCPWPIIGNLNLMGSLPHRSIHSLSQKY-GPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYN 115 (506)
Q Consensus 37 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 115 (506)
|||| |++||+..+..+|+.++.+++++| |||+++.+++.+++++++|++++ ++.++ ..|++.............
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence 6665 899999998889999999999999 79999999888999999999986 66543 345443221100000011
Q ss_pred CcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhccccc
Q 010612 116 YSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGKNYT 195 (506)
Q Consensus 116 ~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~ 195 (506)
+.+.++..+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.|.+ ++++|+.+++..+++++++.+ ||.+++
T Consensus 79 g~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~~~ 154 (415)
T 3awm_A 79 GQGGVQGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVPLP 154 (415)
T ss_dssp CSSSGGGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCCCC
T ss_pred CCcceeecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCCCC
Confidence 12345677899999999998 69999999999999999999999999976 568999999999999999999 898875
Q ss_pred cccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCccc
Q 010612 196 EETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASD 275 (506)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d 275 (506)
..+ ...+.+.+..+..... ++ .....+..++.+.+.+++.+.++++++... ....+|
T Consensus 155 ~~~------~~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d 211 (415)
T 3awm_A 155 DDE------AGNRAGELRALFDAAG---------SA-----SPRHLWSRLARRRVDAWAKRIIEGIRAGSI---GSGSGT 211 (415)
T ss_dssp GGG------HHHHHHHHHHHHHSTT---------CS-----SHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---CCCTTS
T ss_pred cch------HHHHHHHHHHHHHHhc---------cc-----CchHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCCCC
Confidence 421 1333333333322110 00 011245667778888999999998877532 123468
Q ss_pred HHHHHHhccCCCc---cccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChh
Q 010612 276 MVDVLLQLADDPT---LEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPY 352 (506)
Q Consensus 276 ll~~ll~~~~~~~---~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~ 352 (506)
+++.|+...+... .++.+......++||++||+++++|++++|++||++|+++++| +||
T Consensus 212 ~l~~ll~~~~~~g~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~ 273 (415)
T 3awm_A 212 AAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDY 273 (415)
T ss_dssp HHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTH
T ss_pred HHHHHHhhhhccCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHH
Confidence 9999998654321 1222333455666999999999999999999999999999995 689
Q ss_pred HHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 010612 353 IDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELL 432 (506)
Q Consensus 353 l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~ 432 (506)
|+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++||||||++++ .....++
T Consensus 274 l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~ 348 (415)
T 3awm_A 274 AELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD----EDSFNFI 348 (415)
T ss_dssp HHHHHHHHHHHSCCSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC----CCSSSCC
T ss_pred HHHHHHHHhhcCCCcccc-ceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC----CCCCCcc
Confidence 999999999999999974 59999999999999999999999999999999999999999999999753 1345789
Q ss_pred cCCCC----CCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccC
Q 010612 433 PFGAG----RRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPR 498 (506)
Q Consensus 433 ~Fg~G----~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 498 (506)
|||+| +|.|+|++||.+|++++++.|+++|+++++++. .... ...+++.|++++.+++++.
T Consensus 349 ~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~~ 413 (415)
T 3awm_A 349 PQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD----LSID-FARLPALPKSGFVMRNVHI 413 (415)
T ss_dssp TTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC----CCBC-TTSSSCCBTTCCEEEEEES
T ss_pred CCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC----CCcC-cCCCccccCCCceEEEEeC
Confidence 99999 599999999999999999999999999987552 2222 2457778999999999864
No 30
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=6.1e-62 Score=467.52 Aligned_cols=386 Identities=17% Similarity=0.239 Sum_probs=302.0
Q ss_pred CCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEE----e-cC-ccEEEecCHHHHHHHH-hhccccccCCCC
Q 010612 33 NLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLR----F-GS-FPVVVGSSVEMAKLFL-KIHDANFASRPR 105 (506)
Q Consensus 33 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~----~-~~-~~~v~v~dp~~~~~i~-~~~~~~~~~~~~ 105 (506)
....||||+++|+. +..+++..+.++ ++||||++++ + ++ .++++++||+++++++ .++ .+.+++.
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~ 79 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQ 79 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCC
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccccc
Confidence 35678999999987 567899999999 9999999999 6 78 8999999999999999 543 2444432
Q ss_pred CCCc--cee-eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHH-HH
Q 010612 106 TAAG--KYT-TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSK-LS 181 (506)
Q Consensus 106 ~~~~--~~~-~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~-~~ 181 (506)
.... ... .....+.++..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.. .|+++|+.+++.. ++
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~ 157 (406)
T 1ued_A 80 FTQSKSGAHVEAQFVGQISTYDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA-EGPSADLQGLFADPVG 157 (406)
T ss_dssp C---------CGGGTTCGGGCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEHHHHTHHHHH
T ss_pred ccccccccccccccccccccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHhH
Confidence 1111 011 00012345667899999999998 69999999999999999999999999975 3668999998875 99
Q ss_pred HHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHh
Q 010612 182 LNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEH 261 (506)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 261 (506)
+++++ .+||.+.+. . ..+...++.++.. . ...++..+..+.+.+++.+.++++
T Consensus 158 ~~vi~-~~~G~~~~~-~-------~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~~~i~~r 210 (406)
T 1ued_A 158 AHALC-ELLGIPRDD-Q-------REFVRRIRRNADL--------S----------RGLKARAADSAAFNRYLDNLLARQ 210 (406)
T ss_dssp HHHHH-HHHTCCHHH-H-------HHHHHHHHHCC---------------------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCHHH-H-------HHHHHHHHHHHhc--------c----------CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 479987521 1 2333333322110 0 012456677788888999999887
Q ss_pred hhhccCCCCCCcccHHHHHHhccCCCccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCC
Q 010612 262 NAKRKSSTGFVASDMVDVLLQLADDPTLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNR 340 (506)
Q Consensus 262 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~ 340 (506)
++.. .+|+++.|++.....-.++.+ .....+++||+|||+++++|++++|++||++|+|+++|+.
T Consensus 211 ~~~~-------~~d~l~~ll~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------- 276 (406)
T 1ued_A 211 RADP-------DDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE------- 276 (406)
T ss_dssp HHSC-------CSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-------
T ss_pred HhCC-------CCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-------
Confidence 7642 358999999764111112223 2338899999999999999999999999999999999874
Q ss_pred CcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCC
Q 010612 341 LVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGK 420 (506)
Q Consensus 341 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~ 420 (506)
||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||-
T Consensus 277 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-- 343 (406)
T 1ued_A 277 -----------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA-- 343 (406)
T ss_dssp -----------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred -----------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC--
Confidence 5999999999999999976679999999999999999999999999999999999999999999981
Q ss_pred CCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEee
Q 010612 421 EIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVP 495 (506)
Q Consensus 421 ~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (506)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++..+. ++ .....+.++++ ..+.|++
T Consensus 344 --------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~-~~lpv~~ 406 (406)
T 1ued_A 344 --------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPI--EE--VKYRSAFVDCP-DQVPVTW 406 (406)
T ss_dssp --------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCBCCSSSCCB-SCCEEEC
T ss_pred --------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCc--cc--ccccccccccC-CeeeeeC
Confidence 2589999999999999999999999999999999 79987542 12 33334566677 7777753
No 31
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=8.6e-64 Score=478.24 Aligned_cols=384 Identities=19% Similarity=0.226 Sum_probs=297.9
Q ss_pred CCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCC-CCCCcceeeccCc
Q 010612 39 GPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRP-RTAAGKYTTYNYS 117 (506)
Q Consensus 39 gp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 117 (506)
.+..+|++||+..+..+++.++.+++++||||++ ++++.++++++||+++++++.++ .|.+++ ....... ..+
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~-~~g-- 76 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSR-LTG-- 76 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHH-HHC--
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHH-HhC--
Confidence 3455799999988877899999999999999999 99999999999999999999876 666654 1111110 111
Q ss_pred ceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhccccccc
Q 010612 118 DMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGKNYTEE 197 (506)
Q Consensus 118 ~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~ 197 (506)
..++..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+. ++++|+.+++..+++++++.++||.+++.
T Consensus 77 ~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~~- 151 (389)
T 1n97_A 77 RGLLTDWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLSP- 151 (389)
T ss_dssp SSTTTCCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCCH-
T ss_pred CccccCCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcchH-
Confidence 235566799999999998 6999999999999999999999998876 56899999999999999999999999851
Q ss_pred cccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHH
Q 010612 198 TEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMV 277 (506)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll 277 (506)
.+.+.++.+...... .. .+++.++ +....++..++.+.+.+++.+.++++
T Consensus 152 ---------~~~~~~~~~~~~~~~-~~---~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~i~~r---------------- 201 (389)
T 1n97_A 152 ---------SLAEHALKALDRIMA-QT---RSPLALL-DLAAEARFRKDRGALYREAEALIVHP---------------- 201 (389)
T ss_dssp ---------HHHHHHHHHHHHHHH-HH---HCGGGGG-CHHHHHHHHHHHHHHHHHHGGGTTST----------------
T ss_pred ---------HHHHHHHHHHHHHHH-HH---hhHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 233333333322210 00 1111111 11122344444455555444443222
Q ss_pred HHHHhccCCCccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHH
Q 010612 278 DVLLQLADDPTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIV 357 (506)
Q Consensus 278 ~~ll~~~~~~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i 357 (506)
++. ..+.++.......+++||+|||+++++|++++|++||++|+++++|++.+. |||
T Consensus 202 --ll~---~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~i 258 (389)
T 1n97_A 202 --PLS---HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAF 258 (389)
T ss_dssp --TGG---GSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HHH
T ss_pred --hcc---cCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HHH
Confidence 221 111122233348899999999999999999999999999999999999863 999
Q ss_pred HHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 010612 358 KETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAG 437 (506)
Q Consensus 358 ~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G 437 (506)
+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||| +|+||++|+||||++++ ...+..++|||+|
T Consensus 259 ~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~FG~G 332 (389)
T 1n97_A 259 QEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPFGLG 332 (389)
T ss_dssp HHHHHHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTTCCS
T ss_pred HHHHhcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCCCCC
Confidence 9999999999986 6999999999999999999999999999999 99999999999998641 2245579999999
Q ss_pred CCCCcchhhHHHHHHHHHHhhhhcceeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 438 RRMCPGYDLGLKVIQTSLSNLLQCFEWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 438 ~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
+|.|+|++||.+|++++++.|+++|+++++++. +. ..+.+..|+.++.|++++|.
T Consensus 333 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~----~~~~~~~p~~~~~v~~~~~~ 387 (389)
T 1n97_A 333 QRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFP---RV----LAQVTLRPEGGLPARPREEV 387 (389)
T ss_dssp TTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCC---CE----EESSSEEETTCCEECCBC--
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhceEEeCCCC---cc----cceEEeeeCCCceEEEeecc
Confidence 999999999999999999999999999987663 21 45777888889999999875
No 32
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=5.9e-61 Score=461.55 Aligned_cols=370 Identities=16% Similarity=0.222 Sum_probs=290.5
Q ss_pred CCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHhhcc-ccccCCCCCCCccee-
Q 010612 36 LPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLKIHD-ANFASRPRTAAGKYT- 112 (506)
Q Consensus 36 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~~~~-~~~~~~~~~~~~~~~- 112 (506)
.||||+++|++|++.. +|+..+.++. +||||+++.++ +.+.++|++++++++++.++. ..+..++........
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999765 8999999985 69999999874 566778999999999998663 222222222111100
Q ss_pred --eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcC--CCceehHHHHHHHHHHHHHHH
Q 010612 113 --TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSS--AKPVHLKDHLSKLSLNVISRM 188 (506)
Q Consensus 113 --~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~vdl~~~~~~~~~~vi~~~ 188 (506)
...+...++..+|+.|+++||.+ .++|++++++.+.+.+.++++++++.+.+.. ++++|+.+.+...+.++++..
T Consensus 78 ~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~ 156 (404)
T 1jfb_A 78 KQAAKAKPTFVDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYT 156 (404)
T ss_dssp HHHTTSCCCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHH
T ss_pred cchhcccCcccccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHH
Confidence 01112345667899999999998 6999999999999999999999999997642 568999999999999999999
Q ss_pred hhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 010612 189 VLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSS 268 (506)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 268 (506)
+||.+++. .++......... .+. ...+...+..+.+.+++.+.++++++..
T Consensus 157 ~~G~~~~~---------~~~~~~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~~--- 207 (404)
T 1jfb_A 157 LLGVPFND---------LEYLTQQNAIRT-----------NGS------STAREASAANQELLDYLAILVEQRLVEP--- 207 (404)
T ss_dssp HHTCCGGG---------HHHHHHHHHHHH-----------CTT------SCHHHHHHHHHHHHHHHHHHHHHHHHSC---
T ss_pred HcCCCHHH---------HHHHHHHHHHHh-----------ccC------cchHHHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 99987632 222222221110 010 1124566677788889999998877542
Q ss_pred CCCCcccHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcc
Q 010612 269 TGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEK 345 (506)
Q Consensus 269 ~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~ 345 (506)
.+|+++.|++...++. .++.+ .....+++||+|||+++++|++++|++||++|+|++++
T Consensus 208 ----~~d~l~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-------------- 269 (404)
T 1jfb_A 208 ----KDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-------------- 269 (404)
T ss_dssp ----CSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC--------------
T ss_pred ----CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC--------------
Confidence 3589999996443221 12222 23378999999999999999999999999999999992
Q ss_pred cCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCC
Q 010612 346 DIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVK 425 (506)
Q Consensus 346 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~ 425 (506)
.+||+|||+|+||++|+++...+|++.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++++
T Consensus 270 ----~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~~---- 341 (404)
T 1jfb_A 270 ----PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQ---- 341 (404)
T ss_dssp ----GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCSS----
T ss_pred ----hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCCC----
Confidence 379999999999999999966679999999999999999999999999999999999999999999987532
Q ss_pred CCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCC
Q 010612 426 GHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGD 469 (506)
Q Consensus 426 ~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 469 (506)
.++|||.|+|.|+|++||.+|++++++.|+++| ++++..+
T Consensus 342 ----~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 342 ----DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp ----CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ----CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 489999999999999999999999999999999 7998654
No 33
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=3.9e-60 Score=454.51 Aligned_cols=379 Identities=17% Similarity=0.250 Sum_probs=300.7
Q ss_pred cCCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCC--C-CCcc-eeeccCcceEeccC
Q 010612 50 NLMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPR--T-AAGK-YTTYNYSDMVWATY 124 (506)
Q Consensus 50 ~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~~ 124 (506)
..+..+|+..+.++ ++||||+++++ |+.++++++||+++++++.++ .|++++. . .... .........++..+
T Consensus 15 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (403)
T 3aba_A 15 RSCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQD 91 (403)
T ss_dssp CSSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCC
T ss_pred cccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCC
Confidence 34667899999999 89999999997 899999999999999999864 4655532 1 1110 11110123456678
Q ss_pred ChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCC
Q 010612 125 GPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFV 203 (506)
Q Consensus 125 g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~ 203 (506)
|+.|+++||.+ .++|+++.++.+.+.+.+.++++++.+.+ .++++|+..++ ..+++++++. +||.+.+.
T Consensus 92 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------- 161 (403)
T 3aba_A 92 EPEHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVER------- 161 (403)
T ss_dssp TTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-------
T ss_pred chhHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------
Confidence 99999999998 68999999999999999999999999984 36789998766 4799999998 69987632
Q ss_pred ChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhc
Q 010612 204 TPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQL 283 (506)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~ 283 (506)
...+....+.+.... .+ .++..+..+.+.+++.+.++++++.. .+|+++.|++.
T Consensus 162 -~~~~~~~~~~~~~~~--------~~----------p~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~ 215 (403)
T 3aba_A 162 -RAEFQDIAEAMMRVD--------QD----------AAATEAAGMRLGGLLYQLVQERRANP-------GDDLISALITT 215 (403)
T ss_dssp -HHHHHHHHHHHSBSS--------SC----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHTS
T ss_pred -HHHHHHHHHHHHhcc--------Cc----------HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhh
Confidence 133433333322100 00 14566677888889999998887642 35899999986
Q ss_pred cCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHh
Q 010612 284 ADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKET 360 (506)
Q Consensus 284 ~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Et 360 (506)
..++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+
T Consensus 216 ~~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~ 277 (403)
T 3aba_A 216 EDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVEEL 277 (403)
T ss_dssp CCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHH
Confidence 54221 12222 2337899999999999999999999999999999999852 799999999
Q ss_pred hccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCC
Q 010612 361 MRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRM 440 (506)
Q Consensus 361 lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~ 440 (506)
||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.
T Consensus 278 lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~ 347 (403)
T 3aba_A 278 LRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------APHLAFGFGAHQ 347 (403)
T ss_dssp HHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCGGGS
T ss_pred HhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------CCccCCCCCCcc
Confidence 9999999955679999999999999999999999999999999999999999999982 247999999999
Q ss_pred CcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 441 CPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 441 C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
|+|++||.+|++++++.|+++| ++++.++. .++.+ ..+...++...+.|++++||
T Consensus 348 C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 348 CIGQQLARIELQIVFETLFRRLPGLRLAKPV--EELRF--RHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCB--CTTBSSCCBSCCEEECCCCC
T ss_pred CcCHHHHHHHHHHHHHHHHHhCCCceecCCc--ccccc--ccCcccCCcceeEEEecCCC
Confidence 9999999999999999999999 58887542 22223 34566677889999999996
No 34
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=1.2e-60 Score=462.05 Aligned_cols=403 Identities=16% Similarity=0.173 Sum_probs=303.8
Q ss_pred CCCCCCCCCCCCceeecCcCCC-----CCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCC
Q 010612 32 RNLNLPPGPCPWPIIGNLNLMG-----SLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPR 105 (506)
Q Consensus 32 ~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~ 105 (506)
.+.+.||| ++|++.... .+|+..+.++.+ ||||+++++ |+.++++|+++++++++++++ ..|++++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 45667777 899876552 457888888866 799999998 678999999999999999754 46776654
Q ss_pred -CCCc-----c-e---eec--cCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeh
Q 010612 106 -TAAG-----K-Y---TTY--NYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHL 173 (506)
Q Consensus 106 -~~~~-----~-~---~~~--~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl 173 (506)
.... . . .+. ....+++..+|+.|+++||.+ .++|+++.++.+.+.+.++++++++.+.+. ++++|+
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~ 153 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDF-DGECDF 153 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTS-SSEEEH
T ss_pred cccCCcccccchhccccccccccccccccCChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeeh
Confidence 2211 0 1 110 112345667899999999998 699999999999999999999999999873 367999
Q ss_pred HHH-HHHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHH
Q 010612 174 KDH-LSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDR 252 (506)
Q Consensus 174 ~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~ 252 (506)
... ...+++++|+.+ ||.+.+.. ..+....+.+..... .....+|++.... ....++..+..+.+.+
T Consensus 154 ~~~~~~~~~~~vi~~~-fG~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~ 221 (428)
T 1cpt_A 154 MTDCALYYPLHVVMTA-LGVPEDDE--------PLMLKLTQDFFGVHE--PDEQAVAAPRQSA-DEAARRFHETIATFYD 221 (428)
T ss_dssp HHHTTTTHHHHHHHHH-HTCCGGGH--------HHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHH-cCCCHhHH--------HHHHHHHHHHHhccc--ccccccccccccc-hhhHHHHHHHHHHHHH
Confidence 855 567999999999 99876421 234333333221110 0011234443221 1223566777888889
Q ss_pred HHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHH
Q 010612 253 FYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKAT 329 (506)
Q Consensus 253 ~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~ 329 (506)
++.+.++++++.. .+|+++.|++...++. .++.+ .....+++||+|||+++++|++++|++||++|+|++
T Consensus 222 ~~~~~i~~r~~~~-------~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~ 294 (428)
T 1cpt_A 222 YFNGFTVDRRSCP-------KDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAK 294 (428)
T ss_dssp HHHHHHHHHTTSC-------CSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHcCC-------CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 9999998887532 3589999998654321 12222 223789999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCC
Q 010612 330 KELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENP 409 (506)
Q Consensus 330 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p 409 (506)
+|++ |++|||+|+||++|+++. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||
T Consensus 295 ~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP 355 (428)
T 1cpt_A 295 SDPA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNP 355 (428)
T ss_dssp HCGG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSST
T ss_pred HhHH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCCh
Confidence 9874 799999999999999986 569999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcce-eecCCCCCCCCCCcccccCCCCCCC
Q 010612 410 NEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPGDMKKEDLDMEESFGLSTPKK 488 (506)
Q Consensus 410 ~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (506)
++|+||||.. .++|||+|+|.|+|++||.+|++++++.|+++|+ +++.++ + .. ..+......
T Consensus 356 ~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~----~-~~--~~~~~~~~~ 418 (428)
T 1cpt_A 356 DEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGP----P-RL--VATNFVGGP 418 (428)
T ss_dssp TSCCTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSC----C-EE--CCCSSBCSE
T ss_pred hhcCCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCC----c-cc--ccCccccCc
Confidence 9999999941 3799999999999999999999999999999997 787633 1 12 123334444
Q ss_pred CCceEeeccC
Q 010612 489 IPLLVVPQPR 498 (506)
Q Consensus 489 ~~~~~~~~~r 498 (506)
.++.|++++|
T Consensus 419 ~~lpv~~~p~ 428 (428)
T 1cpt_A 419 KNVPIRFTKA 428 (428)
T ss_dssp EECEEEEEEC
T ss_pred ceeeEEeeCC
Confidence 6788888775
No 35
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=3.1e-59 Score=449.66 Aligned_cols=391 Identities=18% Similarity=0.212 Sum_probs=300.9
Q ss_pred CCCCCCCCCCceeecCcCCCCCChHHHHHHHhhc-CCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCCCCcce
Q 010612 34 LNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKY-GPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKY 111 (506)
Q Consensus 34 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~ky-G~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (506)
...||+|+++|.+.....+..+|+..+.++ ++| |||+++++ ++.++++|+||+++++++.++. +++++.......
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~ 80 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPA 80 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccc
Confidence 356788888886644455778999999999 788 99999997 8899999999999999998653 333332111110
Q ss_pred e-----ec-cCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHH-HHHHHH
Q 010612 112 T-----TY-NYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLS-KLSLNV 184 (506)
Q Consensus 112 ~-----~~-~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~-~~~~~v 184 (506)
. .. ...+.++..+|+.|+++|+.+ .++|+.+.++.+.+.+.++++++++.+.+ .|+++|+.+++. .+++++
T Consensus 81 ~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~v 158 (412)
T 2zbx_A 81 TSPRFEAVRESPQAFIGLDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA-AGPTADLVSQFALPVPSMV 158 (412)
T ss_dssp CSGGGC----CCCCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHH
T ss_pred cccccccccccccccccCCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHH
Confidence 0 00 012345567899999999998 68999999999999999999999999975 356899999887 599999
Q ss_pred HHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 010612 185 ISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAK 264 (506)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 264 (506)
++. +||.+.+. ...+...++.++.. + .. ++..+..+.+.+++.+.++++++.
T Consensus 159 i~~-~~G~~~~~--------~~~~~~~~~~~~~~----------~--------~~-~~~~~~~~~~~~~~~~~i~~r~~~ 210 (412)
T 2zbx_A 159 ICR-LLGVPYAD--------HEFFQDASKRLVQS----------T--------DA-QSALTARNDLAGYLDGLITQFQTE 210 (412)
T ss_dssp HHH-HHTCCGGG--------HHHHHHHHHHHHHC----------S--------SH-HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHH-HcCCCHHH--------HHHHHHHHHHHhcc----------C--------cH-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 997 69987632 13444444443321 0 01 455667778888899999887764
Q ss_pred ccCCCCCCcccHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCC
Q 010612 265 RKSSTGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRL 341 (506)
Q Consensus 265 ~~~~~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~ 341 (506)
. .+|+++.|++...+.. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 211 ~-------~~d~l~~ll~~~~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------- 275 (412)
T 2zbx_A 211 P-------GAGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS-------- 275 (412)
T ss_dssp C-------CSSHHHHHHHTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------
T ss_pred C-------CCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH--------
Confidence 2 2589999998654221 12222 2337899999999999999999999999999999999753
Q ss_pred cCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCC
Q 010612 342 VEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKE 421 (506)
Q Consensus 342 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~ 421 (506)
||+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||-
T Consensus 276 ----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--- 342 (412)
T 2zbx_A 276 ----------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA--- 342 (412)
T ss_dssp ----------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---
T ss_pred ----------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC---
Confidence 6999999999999999966679999999999999999999999999999999999999999999971
Q ss_pred CCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeec
Q 010612 422 IDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQ 496 (506)
Q Consensus 422 ~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (506)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++..+. +++.+. .+...+....+.|+..
T Consensus 343 -------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~--~~~~~~g~~~lpv~~~ 407 (412)
T 2zbx_A 343 -------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPV--EQLVLR--PGTTIQGVNELPVTWH 407 (412)
T ss_dssp -------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGSCBC--CTTSCCCBSCCEEECC
T ss_pred -------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCc--ccceec--cccccCCcceeeeecc
Confidence 2579999999999999999999999999999999 79986542 223333 3333444345555443
No 36
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=1.7e-59 Score=450.57 Aligned_cols=377 Identities=19% Similarity=0.230 Sum_probs=299.6
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc-----ceeeccCcceEeccCC
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG-----KYTTYNYSDMVWATYG 125 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g 125 (506)
.+..+|+..+.++ ++||||+++++++.++++|++|+++++++.++. |++++..... ...... ...++..+|
T Consensus 17 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g 92 (411)
T 3a4g_A 17 TFWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATP-TPMMILMDP 92 (411)
T ss_dssp GGTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCS-SCCGGGCCT
T ss_pred hhhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCccc-ccccccCCc
Confidence 3568999999999 999999999999999999999999999998753 6665432211 111111 234566789
Q ss_pred hhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHH-HHHHHHHHHHHHhhccccccccccCCCC
Q 010612 126 PYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDH-LSKLSLNVISRMVLGKNYTEETEQDFVT 204 (506)
Q Consensus 126 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (506)
+.|+++||.+ .++|+++.++.+.+.+.++++++++.+.+ ++++|+... ...+++++++.+ ||.+.+. .
T Consensus 93 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~------ 161 (411)
T 3a4g_A 93 PDHTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAED-R------ 161 (411)
T ss_dssp THHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG-H------
T ss_pred hHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHHH-H------
Confidence 9999999998 68999999999999999999999999875 468999754 578999999975 9987642 1
Q ss_pred hHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhcc
Q 010612 205 PQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLA 284 (506)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~ 284 (506)
..+....+.+... .| + ++..+..+.+.+++.+.++++++.. .+|+++.|++..
T Consensus 162 -~~~~~~~~~~~~~---------~p------~----~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~ 214 (411)
T 3a4g_A 162 -DDFSAWSSVLVDD---------SP------A----DDKNAAMGKLHGYLSDLLERKRTEP-------DDALLSSLLAVS 214 (411)
T ss_dssp -HHHHHHHHHHTTS---------SC------T----TTHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCC
T ss_pred -HHHHHHHHHHhcc---------CC------H----HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhh
Confidence 3344433333211 11 1 1345566778888888888887642 358999999865
Q ss_pred C-CCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHh
Q 010612 285 D-DPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKET 360 (506)
Q Consensus 285 ~-~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Et 360 (506)
. ++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|+. ||+|||+|+
T Consensus 215 ~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~ 276 (411)
T 3a4g_A 215 DEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS------------------LISSAVEEF 276 (411)
T ss_dssp CTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH------------------HHHHHHHHH
Confidence 4 211 12222 2237899999999999999999999999999999999853 799999999
Q ss_pred hccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCC
Q 010612 361 MRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRM 440 (506)
Q Consensus 361 lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~ 440 (506)
||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||.|+|.
T Consensus 277 lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~ 346 (411)
T 3a4g_A 277 LRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------SGGVFFGHGIHF 346 (411)
T ss_dssp HHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTC
T ss_pred HHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------CCCCCCCCCCcc
Confidence 9999999966679999999999999999999999999999999999999999999983 247999999999
Q ss_pred CcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCCC
Q 010612 441 CPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLPI 501 (506)
Q Consensus 441 C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 501 (506)
|+|++||.+|++++++.|+++| ++++.++. +++.+ ..+...++..++.|++++|..+
T Consensus 347 C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~~~r~~~ 404 (411)
T 3a4g_A 347 CLGAQLARLEGRVAIGRLFADRPELALAVGL--DELVY--RESTLVRGLSRMPVTMGPRSAL 404 (411)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CCCTTBCCBSCCEEECCCCCC-
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCcEECCCc--ccccc--ccCccccCcceeEEEecCcchh
Confidence 9999999999999999999999 69987542 12223 2355666778999999998754
No 37
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=6.2e-60 Score=454.68 Aligned_cols=396 Identities=20% Similarity=0.266 Sum_probs=298.0
Q ss_pred HHHHhcccCCCCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccC
Q 010612 23 LFICGSRCRRNLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFAS 102 (506)
Q Consensus 23 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~ 102 (506)
.++++++..++...+|||. +..+|+.++.++++ |||| +.++.+.++++|++++++++.++ ..|++
T Consensus 7 ~~~iyr~~~~pl~~~PGp~----------~~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~ 71 (411)
T 2jjn_A 7 TTCCARRTLTTIDEVPGMA----------DETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSS 71 (411)
T ss_dssp ----------CCCSCCCSS----------CHHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEES
T ss_pred hHHhhhcccCCCCCCCCcc----------cccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccC
Confidence 3344455567778888888 23578889999875 9998 56767899999999999999865 35766
Q ss_pred CCCCCCcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHH-HHHHH
Q 010612 103 RPRTAAGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDH-LSKLS 181 (506)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~-~~~~~ 181 (506)
++....... . .....++..+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++. .++++|+... ...++
T Consensus 72 ~~~~~~~~~-~-~~~~~~~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~----~~~~~d~~~~~~~~~~ 144 (411)
T 2jjn_A 72 DPTRVIEGA-S-PTPGMIHEIDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD----AGESFDLVDVLAFPLP 144 (411)
T ss_dssp CGGGGSTTC-C-CCTTCGGGCCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT----SCSEEEHHHHTTTHHH
T ss_pred cccccCCcc-c-ccccccccCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc----CCCceeHHHHHHHHHH
Confidence 643221111 1 112345666899999999998 68999999999999999999999988 2558999855 56899
Q ss_pred HHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHh
Q 010612 182 LNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEH 261 (506)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 261 (506)
+++|+.+ ||.+.+..+ .+.+..+.+.... .|.+ . .....++..+..+.+.+++.+.++++
T Consensus 145 ~~vi~~~-fG~~~~~~~--------~~~~~~~~~~~~~--------~~~~--~-~p~~~~~~~~~~~~~~~~~~~~i~~r 204 (411)
T 2jjn_A 145 VTIVAEL-LGLPPMDHE--------QFGDWSGALVDIQ--------MDDP--T-DPALAERIADVLNPLTAYLKARCAER 204 (411)
T ss_dssp HHHHHHH-HTCCSCCCS--------TTCCHHHHHHHSC--------CSCT--T-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCCHHHHH--------HHHHHHHHHHhcc--------Cccc--c-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999875322 1122233333211 1110 0 01224556777788888999999888
Q ss_pred hhhccCCCCCCcccHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC
Q 010612 262 NAKRKSSTGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGR 338 (506)
Q Consensus 262 ~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~ 338 (506)
++.. .+|+++.|++...++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 205 ~~~~-------~~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----- 272 (411)
T 2jjn_A 205 RADP-------GDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG----- 272 (411)
T ss_dssp HHSC-------CSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG-----
T ss_pred HhCC-------CCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----
Confidence 7632 3689999998653221 12222 2237899999999999999999999999999999999874
Q ss_pred CCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCC
Q 010612 339 NRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFF 418 (506)
Q Consensus 339 ~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l 418 (506)
||+|||+|+||++|+++. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 273 -------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~ 338 (411)
T 2jjn_A 273 -------------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKS 338 (411)
T ss_dssp -------------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCC
T ss_pred -------------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCC
Confidence 799999999999999996 569999999999999999999999999999999999999999999984
Q ss_pred CCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcce-eecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 419 GKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 419 ~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
+ ...++|||.|+|.|+|++||.+|++++++.|+++|+ +++.++. +.+...+.......++.|++++
T Consensus 339 ~--------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~~~~~~~~~~lpv~~~~ 405 (411)
T 2jjn_A 339 G--------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD-----ERLRHFEQIVLGTRHLPVLAGS 405 (411)
T ss_dssp S--------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS-----CCCCBCCSSSSSBSCCEEECSC
T ss_pred C--------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC-----ceeccccccccCcceeEEEecC
Confidence 2 125899999999999999999999999999999995 9987431 2221234455566778888876
Q ss_pred CC
Q 010612 498 RL 499 (506)
Q Consensus 498 r~ 499 (506)
|.
T Consensus 406 ~~ 407 (411)
T 2jjn_A 406 SP 407 (411)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 38
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=4.7e-60 Score=454.70 Aligned_cols=392 Identities=14% Similarity=0.142 Sum_probs=307.4
Q ss_pred CCCCCCCCCCCCCcee--ecCcC-----CCCCChHHHHHHHhhcC--CeeEEE-ecCccEEEecCHHHHHHHHhhccccc
Q 010612 31 RRNLNLPPGPCPWPII--GNLNL-----MGSLPHRSIHSLSQKYG--PIMQLR-FGSFPVVVGSSVEMAKLFLKIHDANF 100 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~--G~~~~-----~~~~~~~~~~~~~~kyG--~v~~~~-~~~~~~v~v~dp~~~~~i~~~~~~~~ 100 (506)
.++.+.||||.+.|.. +.+-. +..+|+..+.+++ +|| |||++. +| +.++++|++++++++.+ ...|
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHC-TTTE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC-cccc
Confidence 4567899999999874 54322 3457888898985 899 999998 55 68999999999999974 3467
Q ss_pred cCCC-CCCCcceeeccCcce-EeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-
Q 010612 101 ASRP-RTAAGKYTTYNYSDM-VWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL- 177 (506)
Q Consensus 101 ~~~~-~~~~~~~~~~~~~~~-~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~- 177 (506)
++++ ...... ... ... ++..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+ ++++|+.+++
T Consensus 83 ~~~~~~~~~~~-~~~--~~~~l~~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~ 156 (415)
T 2zwu_A 83 SSECPFIPREA-GEA--YDFIPTSMDPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRP--QGQCNFTEDYA 156 (415)
T ss_dssp ETTSCSSSHHH-HHH--CCCTTTTCCTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGG--GTEEEHHHHTT
T ss_pred CCCcccCCCCc-ccc--ccccCccCCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHH
Confidence 7665 111111 111 133 5566799999999998 68999999999999999999999999987 3479999865
Q ss_pred HHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHH
Q 010612 178 SKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELV 257 (506)
Q Consensus 178 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 257 (506)
..+++++++.+ ||.+++. . ..+....+.+... ..|. +..+..+.+.+++.+.
T Consensus 157 ~~~~~~vi~~~-~G~~~~~-~-------~~~~~~~~~~~~~--------~~P~-----------~~~~~~~~~~~~~~~~ 208 (415)
T 2zwu_A 157 EPFPIRIFMLL-AGLPEED-I-------PHLKYLTDQMTRP--------DGSM-----------TFAEAKEALYDYLIPI 208 (415)
T ss_dssp THHHHHHHHHH-HTCCGGG-H-------HHHHHHHHHHHSC--------CSSS-----------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCHHH-H-------HHHHHHHHHHHhc--------cCHH-----------HHHHHHHHHHHHHHHH
Confidence 78999999999 9998742 1 3454444444321 0121 3445667788888888
Q ss_pred HHHhhhhccCCCCCCcccHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 010612 258 LHEHNAKRKSSTGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDR 334 (506)
Q Consensus 258 i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~ 334 (506)
++++++.. ..|+++.|++...++. .++.+ .....+++||+|||+++++|++++|++||++|+++++|++
T Consensus 209 i~~r~~~~-------~~dll~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~- 280 (415)
T 2zwu_A 209 IEQRRQKP-------GTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE- 280 (415)
T ss_dssp HHHHHHSC-------CSSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG-
T ss_pred HHHHHhCC-------CCCHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH-
Confidence 88887642 3589999997643221 12222 2237899999999999999999999999999999999863
Q ss_pred HhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 010612 335 VIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRP 414 (506)
Q Consensus 335 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P 414 (506)
||+|||+|+||++|+++. . |.+.+|++++|+.||||+.|+++.+++||||++|+||++|+|
T Consensus 281 -----------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P 341 (415)
T 2zwu_A 281 -----------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDF 341 (415)
T ss_dssp -----------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCT
T ss_pred -----------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCC
Confidence 799999999999999995 6 999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcce-eecCCCCCCCCCCcccccCCCCCCCCCceE
Q 010612 415 ERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPGDMKKEDLDMEESFGLSTPKKIPLLV 493 (506)
Q Consensus 415 ~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (506)
|||- ..++|||.|+|.|+|++||.+|++++++.|+++|+ +++.++. .+. ..+....+..++.|
T Consensus 342 eR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~-~~~~~~~~~~~lpv 405 (415)
T 2zwu_A 342 SRQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA-----QIQ-HKSGIVSGVQALPL 405 (415)
T ss_dssp TCSS----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC-----CCC-EECSSBCEESCCEE
T ss_pred CCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc-----ccc-cCCccccCcceeEE
Confidence 9961 25799999999999999999999999999999998 9987631 221 23455667778999
Q ss_pred eeccCCCCCC
Q 010612 494 VPQPRLPIHV 503 (506)
Q Consensus 494 ~~~~r~~~~~ 503 (506)
++++|...+|
T Consensus 406 ~~~~r~~~~~ 415 (415)
T 2zwu_A 406 VWDPATTKAV 415 (415)
T ss_dssp ECCGGGCCCC
T ss_pred EEecCCCCCC
Confidence 9999987665
No 39
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=1.2e-59 Score=452.12 Aligned_cols=377 Identities=20% Similarity=0.312 Sum_probs=296.8
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCC--CCCc-c------eeeccCcceEe
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPR--TAAG-K------YTTYNYSDMVW 121 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~--~~~~-~------~~~~~~~~~~~ 121 (506)
.+.++++..+.++ ++||||+++++++.++++|+||+++++++.++. +++++. .... . .......++++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 5678899999999 999999999998889999999999999998653 333221 0100 0 00000113456
Q ss_pred ccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcC-CCceehHHHHH-HHHHHHHHHHhhccccccccc
Q 010612 122 ATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSS-AKPVHLKDHLS-KLSLNVISRMVLGKNYTEETE 199 (506)
Q Consensus 122 ~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~ 199 (506)
..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+.. ++++|+.+++. .+++++++. +||.+.+. .
T Consensus 89 ~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~- 164 (408)
T 1odo_A 89 TAYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-R- 164 (408)
T ss_dssp GCCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-H-
T ss_pred ccCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-H-
Confidence 77899999999998 6999999999999999999999999998643 67899999887 599999996 69987531 1
Q ss_pred cCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHH
Q 010612 200 QDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDV 279 (506)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ 279 (506)
..+...++.++... . ..+...+..+.+.+++.+.++++++.. .+|+++.
T Consensus 165 ------~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ 213 (408)
T 1odo_A 165 ------DGFRALVDGVFDTT--------L----------DQAEAQANTARLYEVLDQLIAAKRATP-------GDDMTSL 213 (408)
T ss_dssp ------HHHHHHHHHHHCTT--------C----------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHH
T ss_pred ------HHHHHHHHHHhccc--------C----------CHHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCHHHH
Confidence 33444444433210 0 024456677788888999998877542 2589999
Q ss_pred HHhccCCC---c--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhH
Q 010612 280 LLQLADDP---T--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYI 353 (506)
Q Consensus 280 ll~~~~~~---~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l 353 (506)
|+++..+. . .++.+ .....+++||+|||+++++|++++|++||++|+|+++|+ +||
T Consensus 214 ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l 275 (408)
T 1odo_A 214 LIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTW 275 (408)
T ss_dssp HHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCH
T ss_pred HHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHH
Confidence 99765431 1 12222 223789999999999999999999999999999999963 369
Q ss_pred HHHHHHhhccCCCCccccceeeccceeEe-ceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 010612 354 DAIVKETMRLHPVAPMLVPRFARENCKVA-GYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELL 432 (506)
Q Consensus 354 ~a~i~EtlRl~~~~~~~~~R~~~~~~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~ 432 (506)
+|||+|+||++|+++...+|.+.+|++++ ||.||||+.|.++.+++||||++|+||++|+|||| ...++
T Consensus 276 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~ 345 (408)
T 1odo_A 276 ADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHL 345 (408)
T ss_dssp HHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCC
T ss_pred HHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCC
Confidence 99999999999999976679999999999 99999999999999999999999999999999994 13589
Q ss_pred cCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 433 PFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 433 ~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
|||.|+|.|+|++||.+|++++++.|+++| ++++..+. .+ .....+.++++..++.|++++
T Consensus 346 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 346 AFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPA--EE--LPPVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp TTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTT--SC--CCBCSCSSBCCBSCCEEECC-
T ss_pred CCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCc--cc--cccccCccccCcccceEEecC
Confidence 999999999999999999999999999999 79986442 12 333345667778899998875
No 40
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=2.7e-59 Score=449.15 Aligned_cols=387 Identities=17% Similarity=0.209 Sum_probs=298.4
Q ss_pred CCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEe-cCcc-EEEecCHHHHHHHHhhccccccCCCCCCCcc-
Q 010612 34 LNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRF-GSFP-VVVGSSVEMAKLFLKIHDANFASRPRTAAGK- 110 (506)
Q Consensus 34 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~-~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~- 110 (506)
.+.+|+|+++|+.++ +..+|+.++.+++ +||||+++.+ ++.+ +++|+||+++++++.+ ..|.+++......
T Consensus 7 ~~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~ 80 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVT 80 (406)
T ss_dssp -CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBC
T ss_pred hhhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCcc
Confidence 356788888888876 5678999999885 7999999996 6766 9999999999999985 3566654332111
Q ss_pred -e-e-eccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHH
Q 010612 111 -Y-T-TYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVIS 186 (506)
Q Consensus 111 -~-~-~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~ 186 (506)
. . ..+....++..+|+.|+++||.+ .++|+++.++.+.+.+.++++++++.+.+ .++++|+..++ ..+++++++
T Consensus 81 ~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~ 158 (406)
T 1s1f_A 81 RLAPHFIPARGAVGFLDPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLR-AGPPADLTEAVLSPFPIAVIC 158 (406)
T ss_dssp BSSSSCSSCTTSGGGCCTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTHHHHHHHH
T ss_pred cccccccccccccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhHhHHHHHH
Confidence 0 0 11112345567899999999998 58899999999999999999999999984 25689998766 479999999
Q ss_pred HHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 010612 187 RMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRK 266 (506)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 266 (506)
. +||.+.+.. ..+....+.+..... | . ++..+..+.+.+++.+.++++++.
T Consensus 159 ~-~~G~~~~~~--------~~~~~~~~~~~~~~~--------~------~----~~~~~~~~~~~~~~~~~i~~r~~~-- 209 (406)
T 1s1f_A 159 E-LMGVPATDR--------HSMHTWTQLILSSSH--------G------A----EVSERAKNEMNAYFSDLIGLRSDS-- 209 (406)
T ss_dssp H-HHTCCGGGH--------HHHHHHHHHHHHHHT--------T------C----CCCHHHHTHHHHHHHHHHHTSCCS--
T ss_pred H-HhCCCHHHH--------HHHHHHHHHHHhccC--------C------H----HHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 8 599876421 344444444433211 1 0 123345566777888888776543
Q ss_pred CCCCCCcccHHHHHHhccCCCc-cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCc
Q 010612 267 SSTGFVASDMVDVLLQLADDPT-LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEE 344 (506)
Q Consensus 267 ~~~~~~~~dll~~ll~~~~~~~-~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~ 344 (506)
..+|+++.|++...+.. .++.+ .....+++|| |||+++++|++++|++||++|+|+++|++
T Consensus 210 -----~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------- 272 (406)
T 1s1f_A 210 -----AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE----------- 272 (406)
T ss_dssp -----CCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------
T ss_pred -----CCCCHHHHHHHhhcccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------
Confidence 13589999997643211 12222 3338899999 99999999999999999999999999863
Q ss_pred ccCCCChhHHHHHHHhhccCCCCc-cccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCC
Q 010612 345 KDIVDLPYIDAIVKETMRLHPVAP-MLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEID 423 (506)
Q Consensus 345 ~~l~~lp~l~a~i~EtlRl~~~~~-~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~ 423 (506)
|++|||+|+||++|+++ ...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 273 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----- 340 (406)
T 1s1f_A 273 -------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP----- 340 (406)
T ss_dssp -------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-------
T ss_pred -------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC-----
Confidence 69999999999999999 45569999999999999999999999999999999999999999999995
Q ss_pred CCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEee
Q 010612 424 VKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVP 495 (506)
Q Consensus 424 ~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (506)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++.++. .++.+ ..+...++...+.|++
T Consensus 341 -----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~ 404 (406)
T 1s1f_A 341 -----NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP--EDVPF--KKGALIRGPEALPVTW 404 (406)
T ss_dssp -----CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCB--CSSCSBCCBSCCEEEC
T ss_pred -----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--cccee--ccCcccCCcceeEEee
Confidence 2479999999999999999999999999999999 79987652 12223 2344556667777775
No 41
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=9.7e-60 Score=452.85 Aligned_cols=377 Identities=18% Similarity=0.245 Sum_probs=293.8
Q ss_pred cCCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCC-CCcc---eeec--cCcceEec
Q 010612 50 NLMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRT-AAGK---YTTY--NYSDMVWA 122 (506)
Q Consensus 50 ~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~~~~---~~~~--~~~~~~~~ 122 (506)
..+..+|+..+.++ ++||||+++++ |+.++++++||+++++++.++. +.+++.. .... .... ...+.++.
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccccc
Confidence 45678999999999 99999999997 8899999999999999998643 3333220 1110 1100 01123556
Q ss_pred cCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHH-HHHHHHHHHHhhccccccccccC
Q 010612 123 TYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLS-KLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 123 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
.+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.. .|+++|+..++. .+++++++. +||.+.+.
T Consensus 97 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----- 168 (408)
T 3abb_A 97 VDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA-KGPGADLVSAFALPVPSVAICE-LLGVPYGD----- 168 (408)
T ss_dssp CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-----
T ss_pred CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-----
Confidence 7899999999998 68999999999999999999999999985 466899998886 599999997 69987632
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLL 281 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll 281 (506)
...+...++.++... .+ ++..+..+.+.+++.+.++++++.. .+|+++.|+
T Consensus 169 ---~~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll 219 (408)
T 3abb_A 169 ---HDFFEECSRNFVGAA--------TS-----------AEADAAFGELYTYLHGLVGRKQAEP-------EDGLLDELI 219 (408)
T ss_dssp ---HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHH
T ss_pred ---HHHHHHHHHHHhccc--------ch-----------HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHH
Confidence 133444443332110 01 1223355667778888888776542 258999999
Q ss_pred hccCCC--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHH
Q 010612 282 QLADDP--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVK 358 (506)
Q Consensus 282 ~~~~~~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~ 358 (506)
+...+. -.++.+ .....+++||+|||+++++|++++|++||++|+++++|+. ||+|||+
T Consensus 220 ~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~ 281 (408)
T 3abb_A 220 ARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------------AVSGVVE 281 (408)
T ss_dssp HHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------HHHHHHH
T ss_pred hcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHH
Confidence 764321 112222 2338899999999999999999999999999999999763 6999999
Q ss_pred HhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q 010612 359 ETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGR 438 (506)
Q Consensus 359 EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~ 438 (506)
|+||++|+++ ..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||| ...++|||+|+
T Consensus 282 E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~ 350 (408)
T 3abb_A 282 ELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN----------ARHHVGFGHGI 350 (408)
T ss_dssp HHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC----------CTTCCTTCCGG
T ss_pred HHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC----------CCCCCCCCCCC
Confidence 9999999999 567999999999999999999999999999999999999999999997 12579999999
Q ss_pred CCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 439 RMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 439 ~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
|.|+|++||.+|++++++.|+++| ++++..+. +.+.+. .+.+.++...+.|++++|+
T Consensus 351 r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~--~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 351 HQCLGQNLARAELEIALGGLFARIPGLRLAVPL--DEVPIK--AGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp GCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGSCBC--CTTSCCSBSCCEEECSCCC
T ss_pred cCCcCHHHHHHHHHHHHHHHHHhCccceecCCc--cccccc--cCcccCCcceeEEEeCCCC
Confidence 999999999999999999999999 89986542 222332 3556677789999999886
No 42
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=2.2e-59 Score=449.16 Aligned_cols=374 Identities=15% Similarity=0.153 Sum_probs=299.1
Q ss_pred CCCCCChHHHHHHHhhc--CCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhH
Q 010612 51 LMGSLPHRSIHSLSQKY--GPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYW 128 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~ky--G~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 128 (506)
.+..+|+.++.+++++| |||+++.+++ +.++|+||+++++++. +...|++++........ ..+...++..+|+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYET-GEFELMMAGQDDPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCC-cccccCcccCCchHH
Confidence 46789999999999999 9999999886 5899999999999995 44567766544332211 122234567789999
Q ss_pred HHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCChHH
Q 010612 129 RQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTPQE 207 (506)
Q Consensus 129 ~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 207 (506)
+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ ++.+|+...+ ..+++++++. +||.+... ...
T Consensus 93 ~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--------~~~ 160 (398)
T 4fb2_A 93 KKYRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPED--------GDT 160 (398)
T ss_dssp HHHHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG--------HHH
T ss_pred HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--------HHH
Confidence 9999998 69999999999999999999999998866 4568975554 6899999999 68976532 144
Q ss_pred HHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCC
Q 010612 208 YTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDP 287 (506)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~ 287 (506)
+.+....++. +. ......+..+.+.+++.+.++++++.. .+|+++.|++...++
T Consensus 161 ~~~~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~~~~ 214 (398)
T 4fb2_A 161 YRRWVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTNP-------GNDIMSRVIMSKIDG 214 (398)
T ss_dssp HHHHHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCBTT
T ss_pred HHHHHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHcccCC
Confidence 5555554443 10 123566777888889999998887642 368999999876532
Q ss_pred c--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccC
Q 010612 288 T--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLH 364 (506)
Q Consensus 288 ~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~ 364 (506)
. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ +++|||+|+||++
T Consensus 215 ~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~ 276 (398)
T 4fb2_A 215 ESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVDELLRFY 276 (398)
T ss_dssp BCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhC
Confidence 1 12222 2237899999999999999999999999999999999975 5899999999999
Q ss_pred CCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcch
Q 010612 365 PVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGY 444 (506)
Q Consensus 365 ~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~ 444 (506)
|+++ .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||- ..++|||+|+|.|+|+
T Consensus 277 p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~ 344 (398)
T 4fb2_A 277 GPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP----------NRHLSLGHGIHRCLGA 344 (398)
T ss_dssp CCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCSTTCCTTH
T ss_pred CCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC----------CCCCCCCCCCcCCCCH
Confidence 9999 459999999999999999999999999999999999999999999982 3579999999999999
Q ss_pred hhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCCC
Q 010612 445 DLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLPI 501 (506)
Q Consensus 445 ~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 501 (506)
+||.+|++++++.|+++| +++++++. ++... .+. ......+.|++++|...
T Consensus 345 ~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~--~~~-~~~~~~lpv~~~~~~~~ 396 (398)
T 4fb2_A 345 HLIRVEARVAITEFLKRIPEFSLDPNK---ECEWL--MGQ-VAGMLHVPIIFPKGKRL 396 (398)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEECTTS---CCEEE--CSS-BCEEEECEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcEECCCC---Cceec--ccc-ccccceeEEEEcCCCCC
Confidence 999999999999999999 99998663 22232 233 33335688999988764
No 43
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=1.1e-59 Score=452.21 Aligned_cols=379 Identities=19% Similarity=0.238 Sum_probs=299.1
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCCCCcc----eeec-------cC-c
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK----YTTY-------NY-S 117 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~----~~~~-------~~-~ 117 (506)
.+..+|+..+.++ ++||||+++++ ++.++++++||+++++++.++. +++++ ..... .... .. .
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 89 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDI-NVWGAWRRGEIPADWPLIGLANPG 89 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCG-GGCHHHHTTCSCTTCTTHHHHSCC
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCc-ccccccccccCCcccchhhhhccc
Confidence 5667899999999 99999999998 8899999999999999998653 33332 10100 0000 01 2
Q ss_pred ceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHH-HHHHHHHHHHhhcccccc
Q 010612 118 DMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLS-KLSLNVISRMVLGKNYTE 196 (506)
Q Consensus 118 ~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~ 196 (506)
+.++..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+ .++++|+.+++. .+++++++. +||.+.+.
T Consensus 90 ~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 166 (411)
T 1gwi_A 90 RSMLTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR 166 (411)
T ss_dssp SSGGGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred cccccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHHH
Confidence 345667899999999998 69999999999999999999999999873 367899998886 599999996 69987632
Q ss_pred ccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccH
Q 010612 197 ETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDM 276 (506)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dl 276 (506)
...+....+.++... . ..++..+..+.+.+++.+.++++++.. .+|+
T Consensus 167 --------~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~ 213 (411)
T 1gwi_A 167 --------LPRLKVLFEKFFSTQ--------T----------PPEEVVATLTELASIMTDTVAAKRAAP-------GDDL 213 (411)
T ss_dssp --------HHHHHHHHHHHHCTT--------S----------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSH
T ss_pred --------HHHHHHHHHHHhccC--------C----------ChHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCH
Confidence 134444444443210 0 024566677788889999998877542 3589
Q ss_pred HHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhH
Q 010612 277 VDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYI 353 (506)
Q Consensus 277 l~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l 353 (506)
++.|+++..+.. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|+ +||
T Consensus 214 l~~ll~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l 275 (411)
T 1gwi_A 214 TSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AEW 275 (411)
T ss_dssp HHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SCH
T ss_pred HHHHHHhcccCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HHH
Confidence 999998653221 12222 223789999999999999999999999999999999963 369
Q ss_pred HHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCCCCCCCccccc
Q 010612 354 DAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIW-ENPNEFRPERFFGKEIDVKGHDFELL 432 (506)
Q Consensus 354 ~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~R~l~~~~~~~~~~~~~~ 432 (506)
+|||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++| +||++|+||||.. ..++
T Consensus 276 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~l 346 (411)
T 1gwi_A 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRHI 346 (411)
T ss_dssp HHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCC
T ss_pred HHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCcc
Confidence 99999999999999976679999999999999999999999999999999999 9999999999942 3589
Q ss_pred cCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 433 PFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 433 ~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
|||+|+|.|+|++||.+|++++++.|+++| ++++..+. .++.. ..+...++...+.|++++|++
T Consensus 347 pFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~lpv~~~~r~~ 411 (411)
T 1gwi_A 347 SFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPA--AELRN--KPVVTQNDLFELPVRLAHHHH 411 (411)
T ss_dssp TTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CSCTTBCCBSCCEEESSCC--
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCc--ccccc--cccccccCcceeEEEecCCCC
Confidence 999999999999999999999999999999 79986442 22222 334566777899999999974
No 44
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=3.9e-59 Score=448.89 Aligned_cols=380 Identities=19% Similarity=0.237 Sum_probs=295.8
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcc----eeeccCcceEeccCCh
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK----YTTYNYSDMVWATYGP 126 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~ 126 (506)
.+..+|+..+.++ ++||||+++++++.+++++++|+++++++.++ ..|++++...... ..... ...++..+|+
T Consensus 10 ~~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~ 86 (404)
T 3ejb_B 10 EFLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQ-NQMMLFQNQP 86 (404)
T ss_dssp HHHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHH-HTSGGGCCTT
T ss_pred ccccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhh-hcchhhcCCc
Confidence 3456889999888 68999999999999999999999999999976 5666655322111 01111 2345677899
Q ss_pred hHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCCh
Q 010612 127 YWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTP 205 (506)
Q Consensus 127 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (506)
.|+++||.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+...+ ..+++++++.+ ||.+.+..
T Consensus 87 ~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------- 154 (404)
T 3ejb_B 87 DHRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANI-IGVPEEDR-------- 154 (404)
T ss_dssp HHHHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGH--------
T ss_pred hHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHHH-cCCCHHHH--------
Confidence 999999998 69999999999999999999999998876 6679986554 56999999985 89776321
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 206 QEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
..+......+..... .|+. ....+...+..+.+.+++.+.++++++.. .+|+++.|+ ...
T Consensus 155 ~~~~~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll-~~~ 214 (404)
T 3ejb_B 155 EQLKEWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRHP-------QQDMISMLL-KGR 214 (404)
T ss_dssp HHHHHHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHH-HC-
T ss_pred HHHHHHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------cchHHHHHH-hcc
Confidence 344444444432221 1321 12245667778888899999998887532 368999999 333
Q ss_pred CCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhc
Q 010612 286 DPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMR 362 (506)
Q Consensus 286 ~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlR 362 (506)
++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ |++|||+|+||
T Consensus 215 ~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR 276 (404)
T 3ejb_B 215 EKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVEECLR 276 (404)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHH
Confidence 221 12222 2337899999999999999999999999999999999864 69999999999
Q ss_pred cCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCc
Q 010612 363 LHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCP 442 (506)
Q Consensus 363 l~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~ 442 (506)
++|+++ ..+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||- ..++|||.|+|.|+
T Consensus 277 l~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----------~~~~~Fg~G~r~C~ 345 (404)
T 3ejb_B 277 YESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----------NPHLSFGHGHHVCL 345 (404)
T ss_dssp HSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTCCT
T ss_pred hCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC----------CCCCCCCCcCccCc
Confidence 999999 4569999999999999999999999999999999999999999999982 24799999999999
Q ss_pred chhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 443 GYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 443 G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
|++||.+|++++++.|+++| +++++++. +.+ ..+..++....+.|++++|.+
T Consensus 346 G~~lA~~e~~~~l~~ll~~f~~~~l~~~~----~~~--~~~~~~~~~~~lpv~~~~~~~ 398 (404)
T 3ejb_B 346 GSSLARLEAQIAINTLLQRMPSLNLADFE----WRY--RPLFGFRALEELPVTFEASWS 398 (404)
T ss_dssp THHHHHHHHHHHHHHHHHHCTTCEEC--C----CCB--CSCSSBCCBSCCEEECC----
T ss_pred CHHHHHHHHHHHHHHHHHhCcccccCCCC----cee--ccCcccCCcceeEEEEecccc
Confidence 99999999999999999999 99988542 233 345566677889999998753
No 45
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=5.6e-59 Score=446.68 Aligned_cols=374 Identities=15% Similarity=0.186 Sum_probs=293.8
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecC--ccEEEecCHHHHHHHHhhccccccCCCCCCCc--ceee-ccC-cceEeccCCh
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGS--FPVVVGSSVEMAKLFLKIHDANFASRPRTAAG--KYTT-YNY-SDMVWATYGP 126 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~--~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~--~~~~-~~~-~~~~~~~~g~ 126 (506)
+++|+..+.+++ +||||+++.+++ .+.+++++|+++++++.++ .|.+.+..... .... .+. ...++..+|+
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 102 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQP 102 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCch
Confidence 567779999987 899999999754 7899999999999999853 46554332110 0001 111 2345677899
Q ss_pred hHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHH-HHHHHHHHHHhhccccccccccCCCCh
Q 010612 127 YWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLS-KLSLNVISRMVLGKNYTEETEQDFVTP 205 (506)
Q Consensus 127 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (506)
.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ .|+++|+..++. .+++++|+. +||.+.+..
T Consensus 103 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-------- 171 (411)
T 2dkk_A 103 DHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILA-EGPPADLVERVLEPFPIAVVSE-VMGVPAADR-------- 171 (411)
T ss_dssp HHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH--------
T ss_pred HHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH--------
Confidence 999999998 68999999999999999999999999986 355899998776 799999998 599876321
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 206 QEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
..+....+.+. . ..+ ..++..++.+.+.+++.+.++++++.. .+|+++.|++. .
T Consensus 172 ~~~~~~~~~~~----~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~dll~~ll~~-~ 225 (411)
T 2dkk_A 172 ERVHSWTRQII----S-----TSG---------GAEAAERAKRGLYGWITETVRARAGSE-------GGDVYSMLGAA-V 225 (411)
T ss_dssp HHHHHHHGGGC----S-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTCC-------SSCHHHHHHHH-H
T ss_pred HHHHHHHHHHH----h-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHh-c
Confidence 22222221111 0 011 124566777888888888888776542 35899999976 2
Q ss_pred CC--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhc
Q 010612 286 DP--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMR 362 (506)
Q Consensus 286 ~~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlR 362 (506)
++ -.++.+ .....+++|| |||+++++|++++|++||++|+++++|++ ||+|||+|+||
T Consensus 226 ~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR 286 (411)
T 2dkk_A 226 GRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------ARGTALDELLR 286 (411)
T ss_dssp HTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------CCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHh
Confidence 11 112223 3338899999 99999999999999999999999999863 68999999999
Q ss_pred cCCCCccc-cceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q 010612 363 LHPVAPML-VPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMC 441 (506)
Q Consensus 363 l~~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C 441 (506)
++|+++.. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|
T Consensus 287 l~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG~G~r~C 356 (411)
T 2dkk_A 287 WISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------NPHLAYGNGHHFC 356 (411)
T ss_dssp HSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------CCCCTTCCSTTSC
T ss_pred hCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------CCCCCCCCCCCCC
Confidence 99999955 569999999999999999999999999999999999999999999995 2579999999999
Q ss_pred cchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 442 PGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 442 ~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
+|++||.+|++++++.|+++| ++++.++. .++.+. .+...++..++.|++++||
T Consensus 357 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~--~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 357 TGAVLARMQTELLVDTLLERLPGLRLAVPA--EQVAWR--RKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGCCBC--CSSSBCCBSCCEEECCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHCCCcEECCCc--cccccc--cCcccCCcceeEEEeccCC
Confidence 999999999999999999999 89987652 122232 3455667789999999997
No 46
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=2.2e-58 Score=443.38 Aligned_cols=373 Identities=21% Similarity=0.255 Sum_probs=291.0
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCC-CCccee-eccCcceEeccCChh
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRT-AAGKYT-TYNYSDMVWATYGPY 127 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~g~~ 127 (506)
.+..+|+..+.++ ++||||+++++ ++.++++++||+++++++.++ .|.+++.. ...... .......++..+|+.
T Consensus 34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 110 (417)
T 2y5n_A 34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPE 110 (417)
T ss_dssp SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTH
T ss_pred hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchH
Confidence 4567899999999 89999999997 899999999999999999864 35554332 111001 100123356678999
Q ss_pred HHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCC-ceehHHHH-HHHHHHHHHHHhhccccccccccCCCCh
Q 010612 128 WRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAK-PVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTP 205 (506)
Q Consensus 128 w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (506)
|+++||.+ .++|+++.++.+.+.+.++++++++.+.+ ++ ++|+..++ ..+++++++. +||.+.+..
T Consensus 111 h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~-------- 178 (417)
T 2y5n_A 111 HSRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAA--TGQPADLVAMFARQLPVRVICE-LLGVPSADH-------- 178 (417)
T ss_dssp HHHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHH--HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH--------
T ss_pred HHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh--CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH--------
Confidence 99999998 68999999999999999999999999975 44 89998776 4699999998 699876321
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 206 QEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
..+....+.+.. . .. . ..++..+..+.+.+++.+.++++++.. .+|+++.|++...
T Consensus 179 ~~~~~~~~~~~~------~---~~------~--~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~dll~~ll~~~~ 234 (417)
T 2y5n_A 179 DRFTRWSGAFLS------T---AE------V--TAEEMQEAAEQAYAYMGDLIDRRRKEP-------TDDLVSALVQARD 234 (417)
T ss_dssp HHHHHHHHTTST------T---CC------C--CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCB
T ss_pred HHHHHHHHHHhc------c---cC------C--CHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhhc
Confidence 233332222111 0 00 0 124566777888889999998887642 3589999998654
Q ss_pred CCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhc
Q 010612 286 DPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMR 362 (506)
Q Consensus 286 ~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlR 362 (506)
++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+||
T Consensus 235 ~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR 296 (417)
T 2y5n_A 235 QQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE------------------LIPSAVEELTR 296 (417)
T ss_dssp TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHH
Confidence 221 12222 2237899999999999999999999999999999999853 79999999999
Q ss_pred cCCCCc-cccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q 010612 363 LHPVAP-MLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMC 441 (506)
Q Consensus 363 l~~~~~-~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C 441 (506)
++|+++ ...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||.|+|.|
T Consensus 297 l~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C 366 (417)
T 2y5n_A 297 WVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------NQHLGFGHGVHHC 366 (417)
T ss_dssp HCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCSTTSC
T ss_pred hcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------CCcCCCCCCCcCC
Confidence 999999 45669999999999999999999999999999999999999999999982 2579999999999
Q ss_pred cchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEe
Q 010612 442 PGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVV 494 (506)
Q Consensus 442 ~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (506)
+|++||.+|++++++.|+++| ++++.++. .++.+. .+...+....+.|+
T Consensus 367 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~--~~~~~~~~~~lpv~ 416 (417)
T 2y5n_A 367 LGAPLARVELQVALEVLLQRLPGIRLGIPE--TQLRWS--EGMLLRGPLELPVV 416 (417)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBC--CCSSBCCBSCCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--ccceec--cCcccCCcceeEEe
Confidence 999999999999999999999 58987542 122232 34455555666664
No 47
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=6.1e-59 Score=448.58 Aligned_cols=382 Identities=18% Similarity=0.227 Sum_probs=300.4
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCC---CCCc---ceeecc-C-cceEec
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPR---TAAG---KYTTYN-Y-SDMVWA 122 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~---~~~~---~~~~~~-~-~~~~~~ 122 (506)
.+..+|+..+.++ ++||||++ + ++.++++++||+++++++.++. |++++. .... .....+ . ...++.
T Consensus 23 ~~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (419)
T 1q5d_A 23 GYAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG 97 (419)
T ss_dssp TTTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT
T ss_pred hhhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc
Confidence 3567899999998 78999999 5 7788999999999999998764 776651 0000 000111 0 233556
Q ss_pred cCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHH-HHHHHHHHHHHHhhccccccccccC
Q 010612 123 TYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDH-LSKLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 123 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
.+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+... +..+++++|+.+ ||.+.+..
T Consensus 98 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~---- 169 (419)
T 1q5d_A 98 LPPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPAECD---- 169 (419)
T ss_dssp SCHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCGGGH----
T ss_pred CCchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH----
Confidence 6899999999998 68999999999999999999999999976 347999864 589999999998 99876421
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcc-cHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVAS-DMVDVL 280 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-dll~~l 280 (506)
..+....+.+..... ...+|+.. ...++..+..+.+.+++.+.++++++.. .+ |+++.|
T Consensus 170 ----~~~~~~~~~~~~~~~----~~~~P~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~~dll~~l 229 (419)
T 1q5d_A 170 ----EKFRRFGSATARALG----VGLVPRVD-----EETKTLVASVTEGLALLHGVLDERRRNP-------LENDVLTML 229 (419)
T ss_dssp ----HHHHHHHHHHHHHTT----TTTSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSCHHHHH
T ss_pred ----HHHHHHHHHHHHhcc----cccccCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCCHHHHH
Confidence 345555555443221 11234321 1235667788888899999998887642 24 899999
Q ss_pred HhccCCC--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHH
Q 010612 281 LQLADDP--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIV 357 (506)
Q Consensus 281 l~~~~~~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i 357 (506)
++...++ -.++.+ .....+++||+|||+++++|++++|++||++|+|+++|+ .||+|||
T Consensus 230 l~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i 291 (419)
T 1q5d_A 230 LQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNAL 291 (419)
T ss_dssp HHHHHSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHH
T ss_pred HhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHH
Confidence 9764221 112222 333889999999999999999999999999999999984 3799999
Q ss_pred HHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 010612 358 KETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAG 437 (506)
Q Consensus 358 ~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G 437 (506)
+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||- ..++|||+|
T Consensus 292 ~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G 361 (419)
T 1q5d_A 292 DEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT----------SASLAYGRG 361 (419)
T ss_dssp HHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCG
T ss_pred HHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC----------CCCCCCCCC
Confidence 9999999999955679999999999999999999999999999999999999999999951 257999999
Q ss_pred CCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 438 RRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 438 ~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
+|.|+|++||.+|++++++.|+++| ++++.++. .+. .+...++..++.|++++|.+
T Consensus 362 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~--~~~~~~~~~~l~v~~~~r~~ 418 (419)
T 1q5d_A 362 PHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP-----VFG--YHPAFRNIESLNVILKPSKA 418 (419)
T ss_dssp GGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC-----EEC--CCSSBCCEEECEEESSCC--
T ss_pred CCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc-----ccc--cccccCCCceeEEEEecCCC
Confidence 9999999999999999999999999 79987641 222 35566777899999999875
No 48
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=1.5e-58 Score=443.28 Aligned_cols=376 Identities=18% Similarity=0.203 Sum_probs=293.9
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc----ce-eeccC-cceEeccCCh
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG----KY-TTYNY-SDMVWATYGP 126 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~----~~-~~~~~-~~~~~~~~g~ 126 (506)
..+|+.++.++ ++||||++ + +.++++|+||+++++++.+ ..|.+++..... .. ...+. ...++..+|+
T Consensus 12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 85 (397)
T 3buj_A 12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEP 85 (397)
T ss_dssp HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTT
T ss_pred ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCCch
Confidence 45788888877 69999998 6 5789999999999999985 345543221100 00 00010 2335566899
Q ss_pred hHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHH-HHHHHHHHHHHHhhccccccccccCCCCh
Q 010612 127 YWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDH-LSKLSLNVISRMVLGKNYTEETEQDFVTP 205 (506)
Q Consensus 127 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (506)
.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+ ++++|+... ...+++++++.+ ||.+.+..
T Consensus 86 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~-------- 153 (397)
T 3buj_A 86 DHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAADW-------- 153 (397)
T ss_dssp HHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH--------
T ss_pred hHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH--------
Confidence 999999998 68999999999999999999999999976 558998754 578999999998 99876421
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 206 QEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
..+....+.+...... .+ .....++..+..+.+.+++.+.++++++.. .+|+++.|++...
T Consensus 154 ~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~ 214 (397)
T 3buj_A 154 GAVGRWSRDVGRTLDR--------GA----SAEDMRRGHAAIAEFADYVERALARRRREG-------GEDLLALMLDAHD 214 (397)
T ss_dssp HHHHHHHHHHHGGGCS--------SC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCC--------CC----ChHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCCHHHHHHHhhh
Confidence 3444444444332110 00 112234566777888899999998887652 3589999997642
Q ss_pred CC-ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhcc
Q 010612 286 DP-TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRL 363 (506)
Q Consensus 286 ~~-~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl 363 (506)
++ -.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+||+
T Consensus 215 ~~~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl 276 (397)
T 3buj_A 215 RGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------------------LLAQAVEECLRY 276 (397)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH------------------HHHHHHHHHHhh
Confidence 21 112222 2337899999999999999999999999999999999853 899999999999
Q ss_pred CCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcc
Q 010612 364 HPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPG 443 (506)
Q Consensus 364 ~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G 443 (506)
+|+++ ..+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||.|+|.|+|
T Consensus 277 ~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G 345 (397)
T 3buj_A 277 DPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCLG 345 (397)
T ss_dssp SCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCTT
T ss_pred cCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------CCCCCCCCCCccCCC
Confidence 99999 5569999999999999999999999999999999999999999999994 247999999999999
Q ss_pred hhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 444 YDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 444 ~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
++||.+|++++++.| ++| ++++.++. .++.+ ..+...++..++.|++++|.
T Consensus 346 ~~lA~~e~~~~l~~l-~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~l~v~~~~rg 397 (397)
T 3buj_A 346 SYLARTQLRAAVAAL-ARLPGLRLGCAS--DALAY--QPRTMFRGLASLPIAFTPGG 397 (397)
T ss_dssp HHHHHHHHHHHHHHH-HTSTTCEESSCS--TTCCB--CSCSSCCCBSCCEEECCTTC
T ss_pred HHHHHHHHHHHHHHH-hcCCCceeCCCC--ccccc--ccccccCCCcceeEEecCCC
Confidence 999999999999999 999 89987652 12223 23566677889999999883
No 49
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=6.6e-58 Score=441.43 Aligned_cols=353 Identities=18% Similarity=0.228 Sum_probs=287.8
Q ss_pred cCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHhhccccccCCCCCCCcceeec------cCcceEec
Q 010612 50 NLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTY------NYSDMVWA 122 (506)
Q Consensus 50 ~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 122 (506)
..+..+|+..+.+++++ |||++++++ |.++++|++|+++++++.++ .|++++.......... ....+++.
T Consensus 25 ~~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (417)
T 3tyw_A 25 RGCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIR 101 (417)
T ss_dssp CSSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGG
T ss_pred cccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhh
Confidence 44578999999999988 999999987 58999999999999999876 5655432211111110 12245667
Q ss_pred cCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccC
Q 010612 123 TYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 123 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
.+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ .|+++|+..++ ..+++++++.+ ||.+.+..
T Consensus 102 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~---- 174 (417)
T 3tyw_A 102 TDAPEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLA-AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL---- 174 (417)
T ss_dssp CCHHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT----
T ss_pred cCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH----
Confidence 7899999999998 69999999999999999999999999987 46679999987 58999999997 99887421
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLL 281 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll 281 (506)
..+......+.... + ..+...+..+.+.+++.+.++++++.. .+|+++.++
T Consensus 175 ----~~~~~~~~~~~~~~---------~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~d~l~~ll 225 (417)
T 3tyw_A 175 ----EFFRDVTRISGSRN---------S---------TAEQVSEALGGLFGLLGGLVAERREEP-------RDDLISKLV 225 (417)
T ss_dssp ----THHHHHHHHHHSSS---------S---------CTTHHHHHHHHHHHHHHHHHHHHHSSC-------CSSHHHHHH
T ss_pred ----HHHHHHHHHHhccc---------C---------CHHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCHHHHHH
Confidence 33444433332110 0 113466777888888999988877642 368999999
Q ss_pred hccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHH
Q 010612 282 QLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVK 358 (506)
Q Consensus 282 ~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~ 358 (506)
....++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+
T Consensus 226 ~~~~~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~ 287 (417)
T 3tyw_A 226 TDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------LMPAAVD 287 (417)
T ss_dssp HHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------------GHHHHHH
T ss_pred HhcccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------HHHHHHH
Confidence 8755432 12222 2337899999999999999999999999999999999864 6999999
Q ss_pred HhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q 010612 359 ETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGR 438 (506)
Q Consensus 359 EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~ 438 (506)
|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||.|+
T Consensus 288 E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~ 357 (417)
T 3tyw_A 288 ELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD----------NHHVAFGYGV 357 (417)
T ss_dssp HHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTCCST
T ss_pred HHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------CCCCCCCCCC
Confidence 999999999986679999999999999999999999999999999999999999999993 2579999999
Q ss_pred CCCcchhhHHHHHHHHHHhhhhcc-eeecCCC
Q 010612 439 RMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGD 469 (506)
Q Consensus 439 ~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 469 (506)
|.|+|++||.+|++++++.|+++| +++++.+
T Consensus 358 r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~ 389 (417)
T 3tyw_A 358 HQCVGQHLARLELEVALETLLRRVPTLRLAGE 389 (417)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred ccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence 999999999999999999999999 9998754
No 50
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=2e-58 Score=446.64 Aligned_cols=394 Identities=17% Similarity=0.148 Sum_probs=296.4
Q ss_pred CCCCCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEE--------ecCccEEEecCHHHHHHHHhhccccccCCC
Q 010612 33 NLNLPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLR--------FGSFPVVVGSSVEMAKLFLKIHDANFASRP 104 (506)
Q Consensus 33 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~--------~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~ 104 (506)
....||.|.++++++......++|+..+.++ ++||||+++. +|+.++++|+++++++++++++ ..|++++
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~ 93 (433)
T 3ivy_A 16 TVPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYE 93 (433)
T ss_dssp ----CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTT
T ss_pred ccCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCc
Confidence 3456777777777766554457899999999 8899999998 4557899999999999999754 5576665
Q ss_pred CCCCcce-------eeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH
Q 010612 105 RTAAGKY-------TTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL 177 (506)
Q Consensus 105 ~~~~~~~-------~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~ 177 (506)
....... ........++..+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~ 170 (433)
T 3ivy_A 94 NGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA--AGSGDFVEQV 170 (433)
T ss_dssp TCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH--HCEEEHHHHT
T ss_pred ccccccccccccccccccccCCccccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeHHHHH
Confidence 4332210 001112445677899999999998 69999999999999999999999999975 5679999888
Q ss_pred -HHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHH
Q 010612 178 -SKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYEL 256 (506)
Q Consensus 178 -~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~ 256 (506)
..+++++|+.+ ||.+.. + ...+....+.+. ....|.... .+..+..+.+.+++.+
T Consensus 171 ~~~~~~~vi~~l-~G~~~~--~------~~~~~~~~~~~~--------~~~~p~~~~-------~~~~~~~~~~~~~~~~ 226 (433)
T 3ivy_A 171 SCELPLQAIAGL-LGVPQE--D------RGKLFHWSNEMT--------GNEDPEYAH-------IDPKASSAELIGYAMK 226 (433)
T ss_dssp TSHHHHHHHHHH-HTCCHH--H------HHHHHHHHTTCS--------CCCCGGGTT-------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCCHH--H------HHHHHHHHHHHh--------ccCCchhhh-------HHHHHHHHHHHHHHHH
Confidence 99999999996 886431 1 022222211111 112232211 1345666778888888
Q ss_pred HHHHhhhhccCCCCCCcccHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHH
Q 010612 257 VLHEHNAKRKSSTGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELD 333 (506)
Q Consensus 257 ~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~ 333 (506)
.++++++.. .+|+++.|++...++. .++++ .....+++||+|||+++++|++++|++||++|+++++|++
T Consensus 227 ~i~~r~~~~-------~~dll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~ 299 (433)
T 3ivy_A 227 MAEEKAKNP-------ADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP 299 (433)
T ss_dssp HHHHC--------------CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHhcCC-------CCcHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc
Confidence 888776542 4589999998654321 12222 2337899999999999999999999999999999999984
Q ss_pred HHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 010612 334 RVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFR 413 (506)
Q Consensus 334 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~ 413 (506)
+|||+|+||++|+++.. +|.+++|++++|+.||||+.|.++.+++||||++|+||++|+
T Consensus 300 --------------------~a~i~E~LRl~p~~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~ 358 (433)
T 3ivy_A 300 --------------------ETAADEIVRWATPVTAF-QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFN 358 (433)
T ss_dssp --------------------TTHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCC
T ss_pred --------------------cchhHHHhhhCcchhce-eeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccC
Confidence 79999999999999985 699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCccccccCC-CCCCCCcchhhHHHHHHHHHHhhhhcce-eecCCCCCCCCCCcccccCCCCCCCCCc
Q 010612 414 PERFFGKEIDVKGHDFELLPFG-AGRRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPGDMKKEDLDMEESFGLSTPKKIPL 491 (506)
Q Consensus 414 P~R~l~~~~~~~~~~~~~~~Fg-~G~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (506)
||||. ..++||| .|+|.|+|++||.+|++++++.|+++|+ +++.++. ... .+........+
T Consensus 359 p~R~~----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~~--~~~~~~g~~~l 421 (433)
T 3ivy_A 359 ILRNP----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP-----ERL--RSGWLNGIKHW 421 (433)
T ss_dssp TTCCS----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC-----EEC--CCSSBCCEEEC
T ss_pred CCCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC-----cee--ccCcccCccee
Confidence 99993 2479999 9999999999999999999999999999 9987542 111 23333444578
Q ss_pred eEeeccCCC
Q 010612 492 LVVPQPRLP 500 (506)
Q Consensus 492 ~~~~~~r~~ 500 (506)
.|++++|.+
T Consensus 422 pv~~~~R~~ 430 (433)
T 3ivy_A 422 QVDYTGRCP 430 (433)
T ss_dssp EEESCC---
T ss_pred EEEEecccc
Confidence 899998865
No 51
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=1.1e-58 Score=445.42 Aligned_cols=371 Identities=16% Similarity=0.164 Sum_probs=290.9
Q ss_pred CCCChHHHHHHHhhcCCee-----EEEecCccEEEecCHHHHHHHHhhccccccCCCCCC-Ccc--ee-e-ccCcceEec
Q 010612 53 GSLPHRSIHSLSQKYGPIM-----QLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTA-AGK--YT-T-YNYSDMVWA 122 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~-----~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 122 (506)
..+|+.++.++ ++||||+ ++++ .++++|+||+++++++.++ ..|++++... ... .. . .+ ...++.
T Consensus 24 ~~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~-~~~l~~ 98 (414)
T 2uuq_A 24 WPNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHD-TPPMVM 98 (414)
T ss_dssp TTCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSS-SCCGGG
T ss_pred ccCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccccccccc-cccccc
Confidence 46889999988 5799999 8776 6789999999999999976 5677765432 111 11 1 11 233555
Q ss_pred cCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehH-HHHHHHHHHHHHHHhhccccccccccC
Q 010612 123 TYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLK-DHLSKLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 123 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
.+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+. +++..+++++++. +||.+++. .
T Consensus 99 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-~--- 170 (414)
T 2uuq_A 99 QDPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRA--NGGGDIVTELFKPLPSMVVAH-YLGVPEED-W--- 170 (414)
T ss_dssp CCTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEHHHHTTTHHHHHHHHH-HTTCCGGG-H---
T ss_pred CCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHH-HhCCCHHH-H---
Confidence 6899999999998 69999999999999999999999999987 3469997 5668999999999 68988742 1
Q ss_pred CCChHHHHHHHHHHHHhhccccccccc-cccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSI-PWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVL 280 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~l 280 (506)
..+....+.+.... .+ |.. ....+..+.+.+++.+.++++++.. .+|+++.|
T Consensus 171 ----~~~~~~~~~~~~~~-------~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l 223 (414)
T 2uuq_A 171 ----TQFDGWTQAIVAAN-------AVDGAT---------TGALDAVGSMMAYFTGLIERRRTEP-------ADDAISHL 223 (414)
T ss_dssp ----HHHHHHHHHHHHHH-------HC--------------CCHHHHHHHHHHHHHHHHHHTTSC-------CSSHHHHH
T ss_pred ----HHHHHHHHHHHhhc-------ccCCch---------hHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHH
Confidence 34444444443310 11 210 1233456677788888888776541 36899999
Q ss_pred HhccC--CCc--cccchh-hhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHH
Q 010612 281 LQLAD--DPT--LEFKLE-RDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDA 355 (506)
Q Consensus 281 l~~~~--~~~--~~~~~~-~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a 355 (506)
++... ++. .++.+. ....+++||+|||+++++|++++|++||++|+|+++|+ +||+|
T Consensus 224 l~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a 285 (414)
T 2uuq_A 224 VAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPD 285 (414)
T ss_dssp HHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHH
T ss_pred HhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHH
Confidence 98754 111 112222 22789999999999999999999999999999999986 38999
Q ss_pred HHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCCCCCCCccccccC
Q 010612 356 IVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIW-ENPNEFRPERFFGKEIDVKGHDFELLPF 434 (506)
Q Consensus 356 ~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~R~l~~~~~~~~~~~~~~~F 434 (506)
||+|+||++|+++ ..+|.+.+|++++|+.||||+.|.++.+++||||++| +||++|+||||. ..++||
T Consensus 286 ~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~----------~~~~~F 354 (414)
T 2uuq_A 286 AVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP----------RNILTF 354 (414)
T ss_dssp HHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC----------CSCCTT
T ss_pred HHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC----------CCCcCC
Confidence 9999999999999 5679999999999999999999999999999999999 999999999984 247999
Q ss_pred CCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccC
Q 010612 435 GAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPR 498 (506)
Q Consensus 435 g~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 498 (506)
|.|+|.|+|++||.+|++++++.|+++| ++++.++ ++.+ ..+.++++..++.|++++|
T Consensus 355 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~~~~--~~~~~~~~~~~lpv~~~~r 413 (414)
T 2uuq_A 355 SHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES----RIVW--SGGSYVRRPLSVPFRVTSS 413 (414)
T ss_dssp CSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----GCEE--CCCSSBCCEEECEEEEC--
T ss_pred CCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----Cccc--cccccccCcceeEEEecCC
Confidence 9999999999999999999999999999 6998732 2233 3456667778999999887
No 52
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=3.3e-58 Score=441.58 Aligned_cols=372 Identities=20% Similarity=0.245 Sum_probs=295.2
Q ss_pred CCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCC--C----Cc----ce-eec--cCcc
Q 010612 52 MGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRT--A----AG----KY-TTY--NYSD 118 (506)
Q Consensus 52 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~--~----~~----~~-~~~--~~~~ 118 (506)
+..+|+..+.++ ++||||+++++++.+++++++|+++++++.++ .|++++.. . .. .. ... ....
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 567899999999 99999999999999999999999999999876 56665432 1 00 11 010 0123
Q ss_pred eEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccc
Q 010612 119 MVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEE 197 (506)
Q Consensus 119 ~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~ 197 (506)
.++..+|+.|+++||.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+..++ ..+++++++.+ ||.+.+..
T Consensus 89 ~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~ 164 (404)
T 1z8o_A 89 NMGTSDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICEL-LGVDEKYR 164 (404)
T ss_dssp SGGGCCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHHH-TTCCGGGT
T ss_pred ccccCCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHHH-hCCCHHHH
Confidence 35567899999999998 68999999999999999999999998865 6689998765 68999999985 99876421
Q ss_pred cccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHH
Q 010612 198 TEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMV 277 (506)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll 277 (506)
..+....+.+.. . ..| . .++..+..+.+.+++.+.++++++.. .+|++
T Consensus 165 --------~~~~~~~~~~~~-~-------~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll 212 (404)
T 1z8o_A 165 --------GEFGRWSSEILV-M-------DPE--------R-AEQRGQAAREVVNFILDLVERRRTEP-------GDDLL 212 (404)
T ss_dssp --------TTHHHHHHHHHC-C-------CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHH
T ss_pred --------HHHHHHHHHHhc-c-------CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHH
Confidence 233444443332 0 011 1 35566778888889999998887642 35899
Q ss_pred HHHHhc-cCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhH
Q 010612 278 DVLLQL-ADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYI 353 (506)
Q Consensus 278 ~~ll~~-~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l 353 (506)
+.|++. ..++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||
T Consensus 213 ~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l 274 (404)
T 1z8o_A 213 SALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------------AL 274 (404)
T ss_dssp HHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred HHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------hH
Confidence 999986 43221 12222 2237899999999999999999999999999999999853 69
Q ss_pred HHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 010612 354 DAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLP 433 (506)
Q Consensus 354 ~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~ 433 (506)
+|||+|+||++|+++ ..+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|
T Consensus 275 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~~ 343 (404)
T 1z8o_A 275 PNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT----------RGHLS 343 (404)
T ss_dssp HHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCT
T ss_pred HHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC----------CCccC
Confidence 999999999999999 5569999999999999999999999999999999999999999999983 24799
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEee
Q 010612 434 FGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVP 495 (506)
Q Consensus 434 Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (506)
||.|+|.|+|++||.+|++++++.|+++| ++++.++. .++.+ ..+..+++..++.|++
T Consensus 344 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 344 FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDA--DDVVW--RRSLLLRGIDHLPVRL 402 (404)
T ss_dssp TCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCC--CCCSSSCCCSCCEEET
T ss_pred CCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCC--Cccee--ccccccCCcceeEEEe
Confidence 99999999999999999999999999999 58987542 12233 2356666777888876
No 53
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=4.9e-59 Score=451.29 Aligned_cols=384 Identities=18% Similarity=0.221 Sum_probs=287.9
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHHHH
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQAR 132 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (506)
..+|+.++.++ ++||||+++..++ +++|++|+++++++.+++. |++++........ . +.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~-~-~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPV-M-RGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCS-C-C-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccc-c-CCCccccCCcHHHHHHH
Confidence 46888888876 6899999987665 8999999999999987643 6665443322111 1 22346777899999999
Q ss_pred HHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehH-HHHHHHHHHHHHHHhhccccccccccCCCChHHHHHH
Q 010612 133 KIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLK-DHLSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEM 211 (506)
Q Consensus 133 ~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 211 (506)
+.+ .++|+++.++.+.+.+.+.++++++.|.+ ++++|+. ++...+++++++. +||.+... ...+...
T Consensus 126 r~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--------~~~~~~~ 193 (441)
T 3nc3_A 126 RIV-VRSFIGDALDHLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD--------HEKISEW 193 (441)
T ss_dssp HHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGGG--------HHHHHHH
T ss_pred HHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH--------HHHHHHH
Confidence 998 69999999999999999999999988865 5679974 5556799999999 58987532 1445555
Q ss_pred HHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc--c
Q 010612 212 LQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT--L 289 (506)
Q Consensus 212 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~ 289 (506)
.+.+......... .....+...+..+.+.+++.+.++++++.. .+|+++.|++...++. .
T Consensus 194 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------~~Dll~~Ll~~~~~~~~ls 255 (441)
T 3nc3_A 194 HSGVADFITSISQ-----------SPEARAHSLWCSEQLSQYLMPVIKERRVNP-------GSDLISILCTSEYEGMALS 255 (441)
T ss_dssp HHHHHHHHHCSCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------CSSHHHHHCC------CCC
T ss_pred HHHHHHhcccccC-----------ChHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhhccCCCCC
Confidence 5555543322110 111235566777888899999998886542 3589999998654321 1
Q ss_pred ccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCc
Q 010612 290 EFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAP 368 (506)
Q Consensus 290 ~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~ 368 (506)
++++ .....+++||+|||+++++|++++|++||++|+++++|+ +|++|||+|+||++|+++
T Consensus 256 ~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~ 317 (441)
T 3nc3_A 256 DKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPVQ 317 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCccc
Confidence 2222 233789999999999999999999999999999999975 689999999999999999
Q ss_pred cccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHH
Q 010612 369 MLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGL 448 (506)
Q Consensus 369 ~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~ 448 (506)
. .+|.+++|++++|+.||||+.|.++.+++||||++|+||++||||||+.++.........++|||.|+|.|+|++||.
T Consensus 318 ~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~ 396 (441)
T 3nc3_A 318 L-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAK 396 (441)
T ss_dssp E-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHH
T ss_pred C-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHH
Confidence 8 569999999999999999999999999999999999999999999997654332223567899999999999999999
Q ss_pred HHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 449 KVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 449 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
+|++++++.|+++| +++++++. ... ..+...+....+.|++++
T Consensus 397 ~e~~~~l~~ll~~f~~~~l~~~~----~~~--~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 397 NEIEIVANIVLDKMRNIRLEEDF----CYA--ESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp HHHHHHHHHHHHHSTTCEECTTC----CCC--EECSSBCEESCCEEECC-
T ss_pred HHHHHHHHHHHHhCcccEECCCC----ccc--ccCccccCcceeEEEEec
Confidence 99999999999999 99988652 122 234556666778888764
No 54
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=1.4e-57 Score=435.62 Aligned_cols=368 Identities=19% Similarity=0.216 Sum_probs=288.3
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCCCC-cceeeccCcce-EeccCC--
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRTAA-GKYTTYNYSDM-VWATYG-- 125 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g-- 125 (506)
.+..+|+.++.++ ++||||+++++ ++.++++|+||+++++++.++ .|.+++.... ..... ...+. ++..+|
T Consensus 23 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~ 98 (404)
T 2xbk_A 23 PKMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADA 98 (404)
T ss_dssp CBTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCH
T ss_pred ccccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCC
Confidence 3567899999999 89999999997 889999999999999999864 3555443211 11101 11221 556679
Q ss_pred ----hhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhcccccccccc
Q 010612 126 ----PYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQ 200 (506)
Q Consensus 126 ----~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 200 (506)
+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ .|+++|+..++ ..+++++++. +||.+.+. .
T Consensus 99 ~~~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~-- 172 (404)
T 2xbk_A 99 ESGRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA-QGPPGDLHGELTVPFALTVLCE-VIGVPPQR-R-- 172 (404)
T ss_dssp HHHHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-H--
T ss_pred CCCCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-H--
Confidence 9999999998 68999999999999999999999999985 45689998766 5799999997 79987632 1
Q ss_pred CCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHH
Q 010612 201 DFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVL 280 (506)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~l 280 (506)
..+...++.+.... .| . +..++.+.+.+++.+.++++++.. .+|+++.|
T Consensus 173 -----~~~~~~~~~~~~~~--------~~--------p---~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l 221 (404)
T 2xbk_A 173 -----AELTTLLAGIAKLD--------DR--------E---GAVRAQDDLFGYVAGLVEHKRAEP-------GPDIISRL 221 (404)
T ss_dssp -----HHHHHHHHHHTBSS--------CH--------H---HHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH
T ss_pred -----HHHHHHHHHHHhcc--------Cc--------H---HHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHh
Confidence 33444433332100 00 0 455667788888888888877642 25899988
Q ss_pred HhccCCCccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHH
Q 010612 281 LQLADDPTLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKE 359 (506)
Q Consensus 281 l~~~~~~~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E 359 (506)
+.. .-.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|
T Consensus 222 -~~~--~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E 280 (404)
T 2xbk_A 222 -NDG--ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VMARAVEE 280 (404)
T ss_dssp -HSS--SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HHHHHHHH
T ss_pred -hcC--CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHH
Confidence 321 1112233 3338899999999999999999999999999999999874 69999999
Q ss_pred hhccCCCCc-cccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q 010612 360 TMRLHPVAP-MLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGR 438 (506)
Q Consensus 360 tlRl~~~~~-~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~ 438 (506)
+||++|+++ ...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||. ..++|||.|+
T Consensus 281 ~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~ 350 (404)
T 2xbk_A 281 VLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHLTFGHGI 350 (404)
T ss_dssp HHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETT
T ss_pred HHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCCCCCCCC
Confidence 999999999 45669999999999999999999999999999999999999999999983 2579999999
Q ss_pred CCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEe
Q 010612 439 RMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVV 494 (506)
Q Consensus 439 ~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (506)
|.|+|++||.+|++++++.|+++| ++++.++. +.+.+ ..+..++....+.|+
T Consensus 351 r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~ 403 (404)
T 2xbk_A 351 WHCIGAPLARLELRTMFTKLFTRLPELRPELPV--EQLRL--KEGQLSGGFAELRVV 403 (404)
T ss_dssp EECTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CSSBTTCCBSCCEEE
T ss_pred cCCCcHHHHHHHHHHHHHHHHHhCCcceecCCC--Cccee--ccCcccCCcceeeee
Confidence 999999999999999999999999 79987552 12223 234455555666664
No 55
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8e-58 Score=438.31 Aligned_cols=374 Identities=16% Similarity=0.194 Sum_probs=295.2
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHHHH
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQAR 132 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (506)
..+|+.++.++++ |||||++. . ++++|+||+++++++.+++ .|++++... .... . .+.++..+|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~-~~~l~~~~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--A-LPMMIDMDDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--C-CSSGGGCCTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--c-cccccccCchHHHHHH
Confidence 4788999999987 99999764 3 7899999999999998653 576664322 1111 1 2345566899999999
Q ss_pred HHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehH-HHHHHHHHHHHHHHhhccccccccccCCCChHHHHHH
Q 010612 133 KIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLK-DHLSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEM 211 (506)
Q Consensus 133 ~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 211 (506)
+.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+. +++..+++++|+.+ ||.+.+.. ..+...
T Consensus 88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--------~~~~~~ 155 (398)
T 2xkr_A 88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR--------DMFLRW 155 (398)
T ss_dssp HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH--------HHHHHH
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH--------HHHHHH
Confidence 998 69999999999999999999999999876 4579998 55568999999998 99986421 345555
Q ss_pred HHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc--c
Q 010612 212 LQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT--L 289 (506)
Q Consensus 212 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~ 289 (506)
.+.+..... |.+ . +...++..+..+.+.+++.+.++++++.. ..|+++.|++...++. .
T Consensus 156 ~~~~~~~~~--------~~~--~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~~~~~ls 216 (398)
T 2xkr_A 156 SDDLVTFLS--------SHV--S--QEDFQITMDAFAAYNDFTRATIAARRADP-------TDDLVSVLVSSEVDGERLS 216 (398)
T ss_dssp HHHHHHHHT--------SCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCBTTBCCC
T ss_pred HHHHHhccC--------ccc--c--hhhHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhhccCCCCC
Confidence 554443211 111 0 12234566777888899999998887632 3689999998654321 1
Q ss_pred ccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCc
Q 010612 290 EFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAP 368 (506)
Q Consensus 290 ~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~ 368 (506)
++.+ .....+++||+|||+++++|++++|++||++|+++++|++ ||+|||+|+||++|+++
T Consensus 217 ~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~ 278 (398)
T 2xkr_A 217 DDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVK 278 (398)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhccccc
Confidence 2222 2237899999999999999999999999999999999875 79999999999999999
Q ss_pred cccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHH
Q 010612 369 MLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGL 448 (506)
Q Consensus 369 ~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~ 448 (506)
. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||.. .++|||.|+|.|+|++||.
T Consensus 279 ~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~ 347 (398)
T 2xkr_A 279 N-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------SHLAFGFGTHFCLGNQLAR 347 (398)
T ss_dssp E-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------CCCTTCCSTTCCTTHHHHH
T ss_pred C-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------CCCcCCCCCcCCcCHHHHH
Confidence 7 6699999999999999999999999999999999999999999999842 3799999999999999999
Q ss_pred HHHHHHHHhhhhcc-eeecCCCCCCCCCCcc-cccCCCCCCCCCceEeeccCCC
Q 010612 449 KVIQTSLSNLLQCF-EWKLPGDMKKEDLDME-ESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 449 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
+|++++++.|+++| ++++.++. ++. ...+...+....+.|++++|..
T Consensus 348 ~e~~~~l~~ll~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~lpv~~~p~~r 396 (398)
T 2xkr_A 348 LELSLMTERVLRRLPDLRLVADD-----SVLPLRPANFVSGLESMPVVFTPSPP 396 (398)
T ss_dssp HHHHHHHHHHHHHSTTCEESCTT-----CCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred HHHHHHHHHHHHhCCCceECCCc-----ceecccCcccccCccceeEEecCCCC
Confidence 99999999999999 59987431 221 0223445556788888888764
No 56
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=4.9e-58 Score=442.50 Aligned_cols=380 Identities=18% Similarity=0.193 Sum_probs=290.1
Q ss_pred CCCCChHHHHHHHhhcCCeeEEEec--CccEEEecCHHHHHHHHhhccccccCCCCC--C----Ccce--------eecc
Q 010612 52 MGSLPHRSIHSLSQKYGPIMQLRFG--SFPVVVGSSVEMAKLFLKIHDANFASRPRT--A----AGKY--------TTYN 115 (506)
Q Consensus 52 ~~~~~~~~~~~~~~kyG~v~~~~~~--~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~--~----~~~~--------~~~~ 115 (506)
+..+|+.++.++. +||||+++++| +.++++|+||+++++++.++ .|++++.. . .... ...+
T Consensus 18 ~~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (425)
T 2z3t_A 18 DIADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVV 94 (425)
T ss_dssp HHHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHH
T ss_pred hhcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccc
Confidence 3468899999985 59999999987 78899999999999999864 67766431 0 0000 0111
Q ss_pred CcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhcccc
Q 010612 116 YSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNY 194 (506)
Q Consensus 116 ~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~ 194 (506)
+ ..++..+|+.|+++||.+ .++|+++.++.+.+.+.+.++++++.+.+. +++|+..++ ..+++++++.+ ||.+.
T Consensus 95 ~-~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--g~~dl~~~~~~~~~~~vi~~~-~G~~~ 169 (425)
T 2z3t_A 95 E-NWLVFLDPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQ--RRPDLVEGFAAPLPILVISAL-LGIPE 169 (425)
T ss_dssp T-TCGGGCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTS--SSCBHHHHTTTHHHHHHHHHH-HTCCG
T ss_pred c-cccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHHHHHHHHHH-hCCCH
Confidence 1 335556799999999998 699999999999999999999999999763 479998754 78999999998 99876
Q ss_pred ccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcc
Q 010612 195 TEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVAS 274 (506)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 274 (506)
+. . ..+....+.+..... .+|. .....++..+..+.+.+++.+.++++++.. .+
T Consensus 170 ~~-~-------~~~~~~~~~~~~~~~------~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~ 223 (425)
T 2z3t_A 170 ED-H-------TWLRANAVALQEAST------TRAR-----DGRGYARAEAASQEFTRYFRREVDRRGGDD-------RD 223 (425)
T ss_dssp GG-H-------HHHHHHHHHHHTTCT------TCCC--------HHHHHHHHHHHHHHHHHHHHCC--------------
T ss_pred HH-H-------HHHHHHHHHHHhhcc------ccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CC
Confidence 42 1 344444444432111 1121 112234566777788888888887766431 46
Q ss_pred cHHHHHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCCh
Q 010612 275 DMVDVLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLP 351 (506)
Q Consensus 275 dll~~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp 351 (506)
|+++.|++...++. .++.+ .....+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 224 dll~~ll~~~~~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------ 285 (425)
T 2z3t_A 224 DLLTLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------------ 285 (425)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------
T ss_pred CHHHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------
Confidence 89999997643211 12222 3338899999999999999999999999999999999863
Q ss_pred hHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 010612 352 YIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFEL 431 (506)
Q Consensus 352 ~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~ 431 (506)
||+|||+|+||++|+++ ..+|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||. ..+
T Consensus 286 ~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~ 354 (425)
T 2z3t_A 286 STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA----------ERQ 354 (425)
T ss_dssp GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS----------SCC
T ss_pred hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC----------CCC
Confidence 79999999999999999 5669999999999999999999999999999999999999999999995 257
Q ss_pred ccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCC
Q 010612 432 LPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLP 500 (506)
Q Consensus 432 ~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 500 (506)
+|||.|+|.|+|++||.+|++++++.|+++| +++ .++. ...+ ..+...++..++.|++++.+-
T Consensus 355 l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~---~~~~--~~~~~~~~~~~lpv~~~~~~~ 418 (425)
T 2z3t_A 355 VGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAH---EVEY--ADDMVFHGPTRLLLDLPDAAL 418 (425)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCE---EEEE--CSCSSBCCEEEEEECCC----
T ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCC---cccc--ccccccCCcceeeEEecchhh
Confidence 9999999999999999999999999999999 899 6542 1122 234566777889999988763
No 57
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=3e-59 Score=462.83 Aligned_cols=411 Identities=13% Similarity=0.138 Sum_probs=286.5
Q ss_pred CCCCCCCCCCCCCceeecCcCC-----CCCChHHHHHHHhhcCC-eeEEEecCccE-------EEecCHHHHHHHHhhcc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLM-----GSLPHRSIHSLSQKYGP-IMQLRFGSFPV-------VVGSSVEMAKLFLKIHD 97 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~v~dp~~~~~i~~~~~ 97 (506)
..+.+.||||.+||++|+++.+ .++++.++.++.+|||+ ||++++++.++ +++++++..+.++....
T Consensus 24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 4567899999999999999776 57899999999999999 99999998887 66677766655554321
Q ss_pred ----ccccCCCCCCCcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc--CCCce
Q 010612 98 ----ANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS--SAKPV 171 (506)
Q Consensus 98 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~v 171 (506)
..+........ ...+......++..+|+.|+++|+++ .+.|+... +.+.+.+.+.++++++.|.+. +++++
T Consensus 104 v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~v 180 (495)
T 3dsk_A 104 VEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKA 180 (495)
T ss_dssp EECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSE
T ss_pred ccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 11111111111 22221112345556799999999998 57888754 889999999999999999763 35689
Q ss_pred ehHHHHHHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccccccccccc-ccccccc---hHHHHHHHH
Q 010612 172 HLKDHLSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWL-GFLDLQG---HIKRMKALM 247 (506)
Q Consensus 172 dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~~~~~~---~~~~~~~~~ 247 (506)
|+.+++..+++++++.++||.+..... ....+...++.+............+|.. ..+.... .........
T Consensus 181 dl~~~~~~~~~~~i~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 255 (495)
T 3dsk_A 181 DFGGSSDGTAFNFLARAFYGTNPADTK-----LKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDY 255 (495)
T ss_dssp ESHHHHHHHHHHHHHHHHHSCCGGGST-----TTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcchhh-----hhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhH
Confidence 999999999999999999999876542 1122333333333221110000011100 0000000 000000001
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCccccchhh-hh-hhHhccccchHHHHHHHHHHHhh-CchH
Q 010612 248 KKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPTLEFKLER-DQ-DLLAGGTESSTVTLEWAISELMK-KPEI 324 (506)
Q Consensus 248 ~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~-~~-~~~~aG~~tt~~~l~~~l~~l~~-~p~~ 324 (506)
+...+++.. ...++++...+. .. .++++.. .. .+++||+|||+.+++|++++|+. ||++
T Consensus 256 ~~~~~~~~~---------------~~~~ll~~~~~~--~l-~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~ 317 (495)
T 3dsk_A 256 QRLYEFFLE---------------SAGEILVEADKL--GI-SREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQV 317 (495)
T ss_dssp HHHHHHHHH---------------HCHHHHHHHHHT--TC-CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHH---------------HHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHH
Confidence 111111100 012333333111 11 1223332 33 34599999999999999999996 9999
Q ss_pred HHHHHHHHHHHhcCC-CCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEe----ceeeCCCCEEEEehhhh
Q 010612 325 FDKATKELDRVIGRN-RLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVA----GYDIPKNTRVLVNVWAI 399 (506)
Q Consensus 325 q~~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~----g~~ip~G~~v~~~~~~~ 399 (506)
|++|++|++++++++ +.++.+++.+||||+|||+|+||++|+++... |.+.+|+++. ||.||||+.|+++.+++
T Consensus 318 ~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~ 396 (495)
T 3dsk_A 318 HNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLA 396 (495)
T ss_dssp HHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHH
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEeccHHh
Confidence 999999999998764 67899999999999999999999999999887 7899999994 99999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCC------CCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcceeecCC
Q 010612 400 GRDPTIWENPNEFRPERFFGKEIDVK------GHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLPG 468 (506)
Q Consensus 400 ~~d~~~~~~p~~f~P~R~l~~~~~~~------~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 468 (506)
||||++|+||++|+||||++++.... .....++|||+|+|.|+|++||.+|++++++.|+++|++...+
T Consensus 397 ~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 471 (495)
T 3dsk_A 397 TRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE 471 (495)
T ss_dssp HTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred hCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence 99999999999999999997521100 0111245555666999999999999999999999999987543
No 58
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=3.1e-57 Score=435.16 Aligned_cols=375 Identities=19% Similarity=0.244 Sum_probs=289.9
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCCCCCcc----eeec-----cCcceE
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK----YTTY-----NYSDMV 120 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~ 120 (506)
.+..+|+.++.++. +||||+++++ |+.++++++||+++++++.++ .|++++...... .... ++.+.+
T Consensus 19 ~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (413)
T 2z36_A 19 GCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLM 95 (413)
T ss_dssp CBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCG
T ss_pred ccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccc
Confidence 45678999999996 7899999997 889999999999999999863 466654321111 1011 122315
Q ss_pred eccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHH-HHHHHHHHHHhhccccccccc
Q 010612 121 WATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLS-KLSLNVISRMVLGKNYTEETE 199 (506)
Q Consensus 121 ~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~ 199 (506)
+..+|+.|+++|+.+ .++|+++.++.+.+.+.++++++++.+.+..++++|+...+. .+++++++.+ ||.+.+..
T Consensus 96 ~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-- 171 (413)
T 2z36_A 96 LGMDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYTDH-- 171 (413)
T ss_dssp GGCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGH--
T ss_pred cccCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHHHH--
Confidence 566899999999998 689999999999999999999999999753367899987665 7999999995 89876321
Q ss_pred cCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHH
Q 010612 200 QDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDV 279 (506)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ 279 (506)
..+....+.+.. .. .. ++..+..+.+.+++.+.++++++.. .+|+++.
T Consensus 172 ------~~~~~~~~~~~~------------~~------~~-~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ 219 (413)
T 2z36_A 172 ------DFFQSRTTMMVS------------RT------SM-EDRRRAFAELRAYIDDLITRKESEP-------GDDLFSR 219 (413)
T ss_dssp ------HHHHHHHHHTTC------------SS------CH-HHHHHHHHHHHHHHHHHHHHHHSSC-------CSSHHHH
T ss_pred ------HHHHHHHHHHhc------------cc------Cc-HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHH
Confidence 233332222110 00 00 4556677788888999988877542 3589999
Q ss_pred HHhccCCC--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHH
Q 010612 280 LLQLADDP--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAI 356 (506)
Q Consensus 280 ll~~~~~~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~ 356 (506)
|+++..++ -.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+||
T Consensus 220 ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~ 281 (413)
T 2z36_A 220 QIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG------------------RTPMA 281 (413)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHH
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------HHHHH
Confidence 99753211 112222 3337899999999999999999999999999999999863 69999
Q ss_pred HHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 010612 357 VKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGA 436 (506)
Q Consensus 357 i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~ 436 (506)
|+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||.
T Consensus 282 i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~ 351 (413)
T 2z36_A 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA----------RHHLAFGF 351 (413)
T ss_dssp HHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC----------CCCCTTCC
T ss_pred HHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC----------CCCCCCCC
Confidence 99999999999966679999999999999999999999999999999999999999999983 24799999
Q ss_pred CCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeec
Q 010612 437 GRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQ 496 (506)
Q Consensus 437 G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (506)
|+|.|+|++||.+|++++++.|+++| ++++.++. ..+.+. .+...+....+.|++.
T Consensus 352 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~--~~~~~~g~~~lpv~~~ 408 (413)
T 2z36_A 352 GPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPM--EDVPFK--GDSVIYGVHELPVTWH 408 (413)
T ss_dssp STTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCBC--TTSSSCCBSCCEEECC
T ss_pred CCccCccHHHHHHHHHHHHHHHHHhCCCccccCCc--ccceec--ccccccCcceeeEEee
Confidence 99999999999999999999999999 58887652 223333 2333444445666554
No 59
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=6.8e-58 Score=441.88 Aligned_cols=379 Identities=15% Similarity=0.158 Sum_probs=294.4
Q ss_pred CCCCChHHHHHHHhhcC-CeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHH
Q 010612 52 MGSLPHRSIHSLSQKYG-PIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQ 130 (506)
Q Consensus 52 ~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 130 (506)
+..+|+.++.++++++| ||+++..++ ++++|+||+++++++. +...|++++...... ........++..+|+.|++
T Consensus 36 ~~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~-~~~~~~~~~~~~dg~~h~~ 112 (421)
T 3lxh_A 36 LEQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPRE-AGEAYDMVPTKLDPPEHTP 112 (421)
T ss_dssp GGGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHH-HHHHCCCTTTTCCTTTHHH
T ss_pred hhcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcc-cccccccCCccCCcHHHHH
Confidence 34688999999987766 899998776 4899999999999995 445676665322111 1111123456778999999
Q ss_pred HHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCChHHHH
Q 010612 131 ARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTPQEYT 209 (506)
Q Consensus 131 ~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (506)
+|+.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+...+ ..++.++++. +||.+... ...+.
T Consensus 113 ~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--------~~~~~ 180 (421)
T 3lxh_A 113 YRKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLA-LAGLPVED--------ATKLG 180 (421)
T ss_dssp HHHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG--------HHHHH
T ss_pred HHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHH-HcCCCHHH--------HHHHH
Confidence 99998 68999999999999999999999998865 5579986555 5688888876 48876532 14455
Q ss_pred HHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc-
Q 010612 210 EMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT- 288 (506)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~- 288 (506)
.....++.... .+| ....++..+..+.+.+++.+.++++++.. .+|+++.|++...++.
T Consensus 181 ~~~~~~~~~~~------~~p-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~~~~~ 240 (421)
T 3lxh_A 181 LLANEMTRPSG------NTP-------EEQGRSLEAANKGFFEYVAPIIAARRGGS-------GTDLITRILNVEIDGKP 240 (421)
T ss_dssp HHHHHHHSCCC------SSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------CCSHHHHHHTSCBTTBC
T ss_pred HHHHHHhcccc------CCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhhccCCC
Confidence 55554432111 111 12245677888888999999998887652 4689999998754321
Q ss_pred -cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCC
Q 010612 289 -LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPV 366 (506)
Q Consensus 289 -~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~ 366 (506)
.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ |++|||+|+||++|+
T Consensus 241 l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~ 302 (421)
T 3lxh_A 241 MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAV 302 (421)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCc
Confidence 12222 2338899999999999999999999999999999999986 699999999999999
Q ss_pred CccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhh
Q 010612 367 APMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDL 446 (506)
Q Consensus 367 ~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~l 446 (506)
+ . .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|||| ...++|||+|+|.|+|++|
T Consensus 303 ~-~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~l 370 (421)
T 3lxh_A 303 V-S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRCAGMHL 370 (421)
T ss_dssp B-E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHH
T ss_pred c-C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccCcCHHH
Confidence 9 4 45999999999999999999999999999999999999999999995 2368999999999999999
Q ss_pred HHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCCCC
Q 010612 447 GLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRLPI 501 (506)
Q Consensus 447 A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 501 (506)
|.+|++++++.|+++| ++++.++. +.... .+.. +....+.|++++|.++
T Consensus 371 A~~e~~~~l~~ll~~fp~~~l~~~~---~~~~~--~~~~-~~~~~lpv~~~p~~~~ 420 (421)
T 3lxh_A 371 ARLEVTVMLQEWLARIPEFRLKDRA---VPIYH--SGIV-AAVENIPLEWEPQRVS 420 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCEECTTC---CCEEE--CSSB-CEEECCEEECCCC---
T ss_pred HHHHHHHHHHHHHHhCCCcEECCCC---Cceec--cccc-cCceeeeEEEeccccC
Confidence 9999999999999999 99998663 22232 2333 3445799999998754
No 60
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=2.1e-58 Score=442.82 Aligned_cols=373 Identities=17% Similarity=0.179 Sum_probs=291.2
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecC--ccEEEecCHHHHHHHHhhccccccCCCCCCCcceeec--cC-cceEeccCChh
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGS--FPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTY--NY-SDMVWATYGPY 127 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~--~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~g~~ 127 (506)
..+|+..+.++.+ ||||+++...| .++++|+++++++++++++ ..|++++.......... .. ...++..+|+.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 113 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ 113 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence 4588999999876 99999987444 7899999999999999654 45666544332211110 01 34567778999
Q ss_pred HHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCChH
Q 010612 128 WRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTPQ 206 (506)
Q Consensus 128 w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 206 (506)
|+++||.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+..++ ..+++++|+. +||.+... ..
T Consensus 114 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--------~~ 181 (415)
T 3mgx_A 114 HRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE-ILGVPAED--------ED 181 (415)
T ss_dssp HHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHH-HHTCCGGG--------HH
T ss_pred HHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--------HH
Confidence 99999998 69999999999999999999999988765 4579998887 6799999998 58865421 14
Q ss_pred HHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCC
Q 010612 207 EYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADD 286 (506)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~ 286 (506)
.+.+..+.+..... ....| .. ..+..+.+.+++.+.++++++.. .+|+++.|+++. .
T Consensus 182 ~~~~~~~~~~~~~~----~~~~~-------~~----~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~ll~~~-~ 238 (415)
T 3mgx_A 182 MLIDLTNHAFGGED----ELFDG-------MT----PRQAHTEILVYFDELITARRKEP-------GDDLVSTLVTDD-D 238 (415)
T ss_dssp HHHHHHHHHTSCCC--------C-------CC----HHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCT-T
T ss_pred HHHHHHHHHHcccC----cccch-------HH----HHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhCC-C
Confidence 45555444432111 00111 11 12566778888888888887652 358999999865 2
Q ss_pred CccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCC
Q 010612 287 PTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPV 366 (506)
Q Consensus 287 ~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~ 366 (506)
.+.++.......+++||+|||+++++|++++|++||++|+|+++|+ ||++|||+|+||++|+
T Consensus 239 ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp 300 (415)
T 3mgx_A 239 LTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVEEVLRWTSP 300 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhcCc
Confidence 2222233344889999999999999999999999999999999986 7999999999999999
Q ss_pred CccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhh
Q 010612 367 APMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDL 446 (506)
Q Consensus 367 ~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~l 446 (506)
++.. +|.+++|++++|+.||||+.|+++.+++||||++|+||++||||||- ..++|||+|+|.|+|++|
T Consensus 301 ~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~l~FG~G~r~C~G~~l 369 (415)
T 3mgx_A 301 AMHV-LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRHITFGHGMHHCLGSAL 369 (415)
T ss_dssp BCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCGGGCCTTHHH
T ss_pred cccc-ceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHHH
Confidence 9964 69999999999999999999999999999999999999999999982 247999999999999999
Q ss_pred HHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccC
Q 010612 447 GLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPR 498 (506)
Q Consensus 447 A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 498 (506)
|.+|++++++.|+++| ++++.++. .. ..+...+....+.|++++|
T Consensus 370 A~~e~~~~l~~ll~~f~~~~l~~~~-----~~--~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 370 ARIELSVVLRVLAERVSRVDLEREP-----AW--LRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp HHHHHHHHHHHHHHHEEEEEECSCC-----EE--CSCSSBCCEEECEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCccCCCc-----cc--ccCCcccCceeeeEEEecC
Confidence 9999999999999999 89987441 11 2234444556788888876
No 61
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=5.8e-57 Score=435.97 Aligned_cols=354 Identities=16% Similarity=0.199 Sum_probs=285.3
Q ss_pred CCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhhccccccCCCCC--C-CcceeeccCcceEecc
Q 010612 54 SLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKIHDANFASRPRT--A-AGKYTTYNYSDMVWAT 123 (506)
Q Consensus 54 ~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 123 (506)
.+|+..+.++. +||||+++.++ +.++++|+||+++++++.++ ..|++++.. . ....... ....++..
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~-~~~~l~~~ 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAE-YFGSMIVL 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHH-HHHGGGGC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhh-hccccccC
Confidence 56788898985 79999999986 67899999999999999975 467776532 1 1111110 12335556
Q ss_pred CChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcC-CCceehHHHH-HHHHHHHHHHHhhccccccccccC
Q 010612 124 YGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSS-AKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 124 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+.+ ++++|+.+++ ..+++++++.+ ||.+++. .
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~--- 194 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD-H--- 194 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-H---
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH-H---
Confidence 799999999998 6899999999999999999999999997642 4489999766 79999999999 9998742 1
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLL 281 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll 281 (506)
..+....+.+.... .|++. ...++..+..+.+.+++.+.++++++.. ..|+++.|+
T Consensus 195 ----~~~~~~~~~~~~~~--------~p~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll 250 (435)
T 2wm5_A 195 ----QRIFHWTNVILGFG--------DPDLA-----TDFDEFMQVSADIGAYATALAEDRRVNH-------HDDLTSSLV 250 (435)
T ss_dssp ----HHHHHHHHHHHHTT--------CTTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHH
T ss_pred ----HHHHHHHHHHhccC--------Ccchh-----hhHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCCHHHHHH
Confidence 34555555544321 13221 1135667778888899999998887632 368999999
Q ss_pred hccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHH
Q 010612 282 QLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVK 358 (506)
Q Consensus 282 ~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~ 358 (506)
+...++. .++.+ .....+++||+|||+++++|++++|++||++|+++++|++ +||+|||+
T Consensus 251 ~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~ 313 (435)
T 2wm5_A 251 EAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVE 313 (435)
T ss_dssp HCCBTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHH
T ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHH
Confidence 8653321 12222 2237899999999999999999999999999999999986 37999999
Q ss_pred HhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC-C
Q 010612 359 ETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGA-G 437 (506)
Q Consensus 359 EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~-G 437 (506)
|+||++|+++ ..+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|||| + ..++|||. |
T Consensus 314 E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~--------~~~lpFG~~G 382 (435)
T 2wm5_A 314 EIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P--------NPHLGFGGGG 382 (435)
T ss_dssp HHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S--------CCCCTTCSSS
T ss_pred HHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C--------CCCCCCCCCC
Confidence 9999999999 556999999999999999999999999999999999999999999994 1 25799999 9
Q ss_pred CCCCcchhhHHHHHHHHHHhhhhcce-eecCC
Q 010612 438 RRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPG 468 (506)
Q Consensus 438 ~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~ 468 (506)
+|.|+|++||.+|++++++.|+++|+ +++.+
T Consensus 383 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~ 414 (435)
T 2wm5_A 383 AHFCLGANLARREIRVAFDELRRQMPDVVATE 414 (435)
T ss_dssp TTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence 99999999999999999999999997 99875
No 62
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=9e-58 Score=438.17 Aligned_cols=349 Identities=16% Similarity=0.155 Sum_probs=280.4
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHH
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQ 130 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 130 (506)
.+..+|+.++.+++++ |||+++..++ +.++|+||+++++++.++ ..|++++......... .....++..+|+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGK-VMQFIPLQQDGAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHH-HHCCTTTTCCHHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccc-ccccCccccCCcHHHH
Confidence 4567899999999999 9999998874 588999999999999654 5676665322211111 1123456778999999
Q ss_pred HHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCChHHHH
Q 010612 131 ARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTPQEYT 209 (506)
Q Consensus 131 ~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (506)
+||.+ .++|+++.++.+.+.+.+.++++++.+.+ ++++|+...+ ..++.++++. +||.+... ...+.
T Consensus 97 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--------~~~~~ 164 (396)
T 3oft_A 97 FRTPV-MKGLASRFVVALEPKVQAVARKLMESLRP--RGSCDFVSDFAEILPLNIFLT-LIDVPLED--------RPRLR 164 (396)
T ss_dssp HHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGG--GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--------HHHHH
T ss_pred HHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--------HHHHH
Confidence 99998 69999999999999999999999999976 4578987666 5677777776 58876422 13444
Q ss_pred HHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc-
Q 010612 210 EMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT- 288 (506)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~- 288 (506)
.....+..... .+...+..+.+.+++.+.++++++.. .+|+++.|++...++.
T Consensus 165 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~~~~~~ 218 (396)
T 3oft_A 165 QLGVQLTRPDG-------------------SMTVEQLKQAADDYLWPFIEKRMAQP-------GDDLFSRILSEPVGGRP 218 (396)
T ss_dssp HHHHHHHSCCS-------------------SCCHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHTSCBTTBC
T ss_pred HHHHHHhCCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhhccCCC
Confidence 44444331100 12345667778888888988887662 4689999998754321
Q ss_pred -cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCC
Q 010612 289 -LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPV 366 (506)
Q Consensus 289 -~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~ 366 (506)
.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ |++|||+|+||++|+
T Consensus 219 l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~ 280 (396)
T 3oft_A 219 WTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADELMRRYPT 280 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCc
Confidence 12222 2237899999999999999999999999999999999875 799999999999999
Q ss_pred CccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhh
Q 010612 367 APMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDL 446 (506)
Q Consensus 367 ~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~l 446 (506)
+ . .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||+. ...++|||+|+|.|+|++|
T Consensus 281 ~-~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~G~~l 350 (396)
T 3oft_A 281 V-A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTMGVGAHRCVGAGL 350 (396)
T ss_dssp B-E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTTCCGGGCCTTHHH
T ss_pred c-c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccCCCCCccCcCHHH
Confidence 9 4 4599999999999999999999999999999999999999999999973 3468999999999999999
Q ss_pred HHHHHHHHHHhhhhcc-eeecCCC
Q 010612 447 GLKVIQTSLSNLLQCF-EWKLPGD 469 (506)
Q Consensus 447 A~~e~~~~l~~ll~~f-~~~~~~~ 469 (506)
|.+|++++++.|+++| +++++++
T Consensus 351 A~~e~~~~l~~ll~~~~~~~l~~~ 374 (396)
T 3oft_A 351 ARMEVIVFLREWLGGMPEFALAPD 374 (396)
T ss_dssp HHHHHHHHHHHHHHHSCCEEECSS
T ss_pred HHHHHHHHHHHHHHhCCCceECCC
Confidence 9999999999999999 9999866
No 63
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=1.6e-58 Score=455.25 Aligned_cols=407 Identities=14% Similarity=0.177 Sum_probs=280.0
Q ss_pred CCCCCCCCCCCCCceeecCcCC-----CC-CChHHHHHHHhhcCC-eeEEEecCc-------cEEEecCHHHHHHHHhhc
Q 010612 31 RRNLNLPPGPCPWPIIGNLNLM-----GS-LPHRSIHSLSQKYGP-IMQLRFGSF-------PVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 31 ~~~~~~ppgp~~~p~~G~~~~~-----~~-~~~~~~~~~~~kyG~-v~~~~~~~~-------~~v~v~dp~~~~~i~~~~ 96 (506)
..+.+.||||.+||++|++..+ .. +++.++.++.+|||+ ||++++++. .++++++....+.++...
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 4567889999999999999875 45 789999999999999 999998744 344445555443444311
Q ss_pred ----cccccCCCCCCCcceeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhc--CCCc
Q 010612 97 ----DANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKS--SAKP 170 (506)
Q Consensus 97 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~ 170 (506)
...+..... ......+......+...+|+.|+++|+.+ .++|+++ ++.+.+.+.+.++++++.|.+. ++++
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~ 161 (473)
T 3dan_A 85 KVEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGK 161 (473)
T ss_dssp TEECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ceecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 111111110 00111111112345667799999999998 6889885 8999999999999999999753 3568
Q ss_pred eehHHHHHHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccc-cccccccch---HHHHHHH
Q 010612 171 VHLKDHLSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPW-LGFLDLQGH---IKRMKAL 246 (506)
Q Consensus 171 vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~~~~~~~~---~~~~~~~ 246 (506)
+|+.+++..+++++++.++||.++.... ....+....+.+........+...+|. +........ .....+.
T Consensus 162 vdl~~~~~~~~~~~i~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~ 236 (473)
T 3dan_A 162 AAFNDVGEQAAFRFLGRAYFNSNPEETK-----LGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKST 236 (473)
T ss_dssp EECHHHHHHHHHHHHHHHHHSCCGGGST-----TTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCchh-----hhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhhhhc
Confidence 9999999999999999999999986621 122233333332211110000001110 000000000 0000111
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc-cccchhh-hhhhH-hccccchHHHHHHHHHHHhh-Cc
Q 010612 247 MKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT-LEFKLER-DQDLL-AGGTESSTVTLEWAISELMK-KP 322 (506)
Q Consensus 247 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~-~~~~~~~-~~~~~-~aG~~tt~~~l~~~l~~l~~-~p 322 (506)
.+.+.+.+ .|+++.+++..++.. .++++.. .+.++ ++|++||+++++|++++|++ ||
T Consensus 237 ~~~~~~~~-------------------~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P 297 (473)
T 3dan_A 237 YNKLYDYF-------------------QSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGE 297 (473)
T ss_dssp HHHHHHHH-------------------HHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCH
T ss_pred hhhhHHHH-------------------HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCH
Confidence 11111111 123333433221110 1112222 22333 67777799999999999999 89
Q ss_pred hHHHHHHHHHHHHhcC-C-CCcCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeE----eceeeCCCCEEEEeh
Q 010612 323 EIFDKATKELDRVIGR-N-RLVEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKV----AGYDIPKNTRVLVNV 396 (506)
Q Consensus 323 ~~q~~l~~Ei~~~~~~-~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i----~g~~ip~G~~v~~~~ 396 (506)
++|++||+|+++++++ . +.++.+++++||||+|||+|+||++|+++... |.+.+|+++ +||.||||+.|.++.
T Consensus 298 ~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~v~~~~ 376 (473)
T 3dan_A 298 NLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEMLFGYQ 376 (473)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEH
T ss_pred HHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCEEEech
Confidence 9999999999999875 3 67899999999999999999999999999887 779999999 999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC---------CCCCCCcchhhHHHHHHHHHHhhhhcceeecC
Q 010612 397 WAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFG---------AGRRMCPGYDLGLKVIQTSLSNLLQCFEWKLP 467 (506)
Q Consensus 397 ~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg---------~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~ 467 (506)
+++||||++|+||++|||+||++++. ....+++|| +|+|.|+|++||.+|++++++.|+++|++...
T Consensus 377 ~~~~~dp~~~~dp~~F~p~R~~~~~~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~ 452 (473)
T 3dan_A 377 PFATKDPKVFDRPEEYVPDRFVGDGE----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEI 452 (473)
T ss_dssp HHHTTCTTTSSSTTSCCTTTTSGGGG----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred HHhhCCchhcCCcccCCccccCCCcc----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEc
Confidence 99999999999999999999997521 222344554 55599999999999999999999999997654
Q ss_pred CC
Q 010612 468 GD 469 (506)
Q Consensus 468 ~~ 469 (506)
++
T Consensus 453 ~~ 454 (473)
T 3dan_A 453 EL 454 (473)
T ss_dssp EE
T ss_pred cC
Confidence 33
No 64
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=4.9e-57 Score=431.21 Aligned_cols=369 Identities=17% Similarity=0.177 Sum_probs=291.7
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecC----ccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCCh
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGS----FPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGP 126 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~----~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 126 (506)
.+..+|+..+.++ ++||||+++++++ .++++|+||++++++++ +...|++++........ ....+.++..+|+
T Consensus 9 ~~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~ 85 (384)
T 3oo3_A 9 RLRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADR-ALLPGILQAYDPP 85 (384)
T ss_dssp EETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC------CCCTTCGGGCCTT
T ss_pred ccccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccc-cccccccccCCCh
Confidence 3468999999999 5999999999886 89999999999999995 44677776544322211 1223556677899
Q ss_pred hHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhccccccccccCCCChH
Q 010612 127 YWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGKNYTEETEQDFVTPQ 206 (506)
Q Consensus 127 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 206 (506)
.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ .++++|+.+++...+.+.+...+||.+.+.. .
T Consensus 86 ~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~--------~ 155 (384)
T 3oo3_A 86 DHTRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ--------A 155 (384)
T ss_dssp HHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH--------H
T ss_pred hHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH--------H
Confidence 999999998 69999999999999999999999999976 4678999999999888888888899876321 3
Q ss_pred HHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCC
Q 010612 207 EYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADD 286 (506)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~ 286 (506)
.+...++.++. ....+...+..+.+.+++.+.++++++.. .+|+++.+++....
T Consensus 156 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~d~l~~ll~~~~~ 209 (384)
T 3oo3_A 156 ELSRMIRESRE-------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRDP-------GDGMIGVIVREHGA 209 (384)
T ss_dssp HHHHHHHHHHH-------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHHGG
T ss_pred HHHHHHHHHhc-------------------cCChHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhcCC
Confidence 45555554443 01135566778888889999998876532 35899999986221
Q ss_pred Cccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCC
Q 010612 287 PTLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHP 365 (506)
Q Consensus 287 ~~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~ 365 (506)
.-.++.+ .....+++||+|||+++++|++++|++||++|+++++|++. |+|||+|+||++|
T Consensus 210 ~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p 271 (384)
T 3oo3_A 210 EISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVLRHAS 271 (384)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCC
Confidence 1112222 23388999999999999999999999999999999999874 8999999999999
Q ss_pred CCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchh
Q 010612 366 VAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYD 445 (506)
Q Consensus 366 ~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~ 445 (506)
+++...+|.+.+|++++|+.||||+.|.++.+++|| +||++|+|||| ...++|||.|+|.|+|++
T Consensus 272 ~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~ 336 (384)
T 3oo3_A 272 IVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE----------KATHMAFGHGIHHCIGAP 336 (384)
T ss_dssp SCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS----------CCCCCTTCCSTTSCTTHH
T ss_pred cccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC----------CCCcCCCCCCCcCCCCHH
Confidence 998766799999999999999999999999999999 89999999996 235899999999999999
Q ss_pred hHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEe
Q 010612 446 LGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVV 494 (506)
Q Consensus 446 lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (506)
||.+|++++++.|+++| ++++.++. .++.+.. .+...++...+.|+
T Consensus 337 lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~-~~~~~~~~~~lpv~ 383 (384)
T 3oo3_A 337 LARLQLRVALPAVVGRFPSLRLAVPE--EDLRFKP-GRPAPFAVEELPLE 383 (384)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEESSCG--GGCCEEC-SSSSCCEESCCEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCeeCCCC--ccceeec-ccccccCcceeeee
Confidence 99999999999999999 99987653 2233332 03444444455554
No 65
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=5.9e-57 Score=438.24 Aligned_cols=360 Identities=17% Similarity=0.205 Sum_probs=281.7
Q ss_pred ChHHHHHHHhhcCCee--EEE-ecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeec------------cCcceE
Q 010612 56 PHRSIHSLSQKYGPIM--QLR-FGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTY------------NYSDMV 120 (506)
Q Consensus 56 ~~~~~~~~~~kyG~v~--~~~-~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 120 (506)
|+..+.++ ++||||+ ++. +++.++++|+++++++++++++ ..|++++.......... .....+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 77888888 7899999 888 7888999999999999999765 66777654332111100 012356
Q ss_pred eccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccc
Q 010612 121 WATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETE 199 (506)
Q Consensus 121 ~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~ 199 (506)
+..+|+.|+++||.+ .++|+++.++.+.+.+.++++++++.+.+. ++++|+..++ ..+++++|+.+ ||.+...
T Consensus 125 ~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~--- 198 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGA-GEEGDFMALVAAPYPLHVVMQI-LGVPPED--- 198 (450)
T ss_dssp GGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHT-CSEEEHHHHTTTHHHHHHHHHH-TTCCGGG---
T ss_pred ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEeeHHHHHHHHHHHHHHHH-cCCChhH---
Confidence 677899999999998 699999999999999999999999999863 6789998888 69999999996 8876421
Q ss_pred cCCCChHHHHHHHHHHHHhhccccccccccccccc-cccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHH
Q 010612 200 QDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFL-DLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVD 278 (506)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~ 278 (506)
...+....+.+.... .....+++.+. ......+...+..+.+.+++.+.++++++.. .+|+++
T Consensus 199 -----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~ 262 (450)
T 3tkt_A 199 -----EPKMLFLTQQMFGGQ----DEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP-------TDDVAT 262 (450)
T ss_dssp -----HHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHH
T ss_pred -----HHHHHHHHHHHhccc----cchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHH
Confidence 134444433332111 11112222111 1123346677788888999999998887652 358999
Q ss_pred HHHhccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHH
Q 010612 279 VLLQLADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDA 355 (506)
Q Consensus 279 ~ll~~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a 355 (506)
.|++...++. .++++ .....+++||+|||+++++|++++|++||++|+|+++|+ +|++|
T Consensus 263 ~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a 324 (450)
T 3tkt_A 263 VIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR------------------NLLPG 324 (450)
T ss_dssp HHHTCEETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHH
T ss_pred HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH------------------HHHHH
Confidence 9998654321 11222 223789999999999999999999999999999999986 37999
Q ss_pred HHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 010612 356 IVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFG 435 (506)
Q Consensus 356 ~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg 435 (506)
||+|+||++|+++. .+|.+++|++++|+.||||+.|.++.+++||||++|+||++|+||||- ..++|||
T Consensus 325 ~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~~l~FG 393 (450)
T 3tkt_A 325 IVEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NRHLAFG 393 (450)
T ss_dssp HHHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TCSSTTC
T ss_pred HHHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CCCCCCC
Confidence 99999999999995 569999999999999999999999999999999999999999999952 2479999
Q ss_pred CCCCCCcchhhHHHHHHHHHHhhhhcce-eecCC
Q 010612 436 AGRRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPG 468 (506)
Q Consensus 436 ~G~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~ 468 (506)
.|+|.|+|++||.+|++++++.|+++|+ +++.+
T Consensus 394 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~ 427 (450)
T 3tkt_A 394 AGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG 427 (450)
T ss_dssp CSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS
T ss_pred CcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence 9999999999999999999999999998 67663
No 66
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=2.1e-57 Score=435.16 Aligned_cols=349 Identities=17% Similarity=0.252 Sum_probs=271.1
Q ss_pred CChHHHHHHHhhcCCeeEEEec-Cc---cEEEecCHHHHHHHHhhccccccCCCCC------C-CcceeeccCcceEecc
Q 010612 55 LPHRSIHSLSQKYGPIMQLRFG-SF---PVVVGSSVEMAKLFLKIHDANFASRPRT------A-AGKYTTYNYSDMVWAT 123 (506)
Q Consensus 55 ~~~~~~~~~~~kyG~v~~~~~~-~~---~~v~v~dp~~~~~i~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~ 123 (506)
+++..+.+++++ |||+++.++ +. ++++|+||+++++++.++ ..|++++.. . ............++..
T Consensus 14 ~~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (398)
T 1lfk_A 14 QGLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDY 91 (398)
T ss_dssp ETTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGC
T ss_pred CCCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCcccc
Confidence 334445567666 999999875 45 899999999999999323 345555431 0 0001011112345566
Q ss_pred CChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHH-HHHHHHHHHhhccccccccccCC
Q 010612 124 YGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSK-LSLNVISRMVLGKNYTEETEQDF 202 (506)
Q Consensus 124 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~-~~~~vi~~~~fG~~~~~~~~~~~ 202 (506)
+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.+ .++++|+.+++.. ++.++++. +||.+++. .
T Consensus 92 ~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~---- 163 (398)
T 1lfk_A 92 DPPEHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER-AGSPADLIAFVADKVPGAVLCE-LVGVPRDD-R---- 163 (398)
T ss_dssp CTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-H----
T ss_pred CCHHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-H----
Confidence 799999999998 68899999999999999999999999975 3668999999987 99999998 58987632 1
Q ss_pred CChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHh
Q 010612 203 VTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQ 282 (506)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~ 282 (506)
..+....+.++. . ....+...+..+.+.+++.+.++++++.. .+|+++.|++
T Consensus 164 ---~~~~~~~~~~~~------------~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~ 215 (398)
T 1lfk_A 164 ---DMFMKLCHGHLD------------A------SLSQKRRAALGDKFSRYLLAMIARERKEP-------GEGMIGAVVA 215 (398)
T ss_dssp ---HHHHHHHHHTTC------------T------TSCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHH
T ss_pred ---HHHHHHHHHHHh------------c------ccchHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHH
Confidence 233333332211 0 01125566777888889999998887642 3589999997
Q ss_pred ccCCCccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhh
Q 010612 283 LADDPTLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETM 361 (506)
Q Consensus 283 ~~~~~~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Etl 361 (506)
.....-.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ |++|||+|+|
T Consensus 216 ~~~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l 277 (398)
T 1lfk_A 216 EYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELI 277 (398)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHH
Confidence 64111112223 3338899999999999999999999999999999999875 6999999999
Q ss_pred ccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q 010612 362 RLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMC 441 (506)
Q Consensus 362 Rl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C 441 (506)
|++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|
T Consensus 278 Rl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C 347 (398)
T 1lfk_A 278 RYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------IPHVAFGHGVHHC 347 (398)
T ss_dssp HHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSC
T ss_pred HhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------CCCCCCCCCCCcC
Confidence 999999966679999999999999999999999999999999999999999999983 2479999999999
Q ss_pred cchhhHHHHHHHHHHhhhhcc-eeecCCC
Q 010612 442 PGYDLGLKVIQTSLSNLLQCF-EWKLPGD 469 (506)
Q Consensus 442 ~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 469 (506)
+|++||.+|++++++.|+++| ++++..+
T Consensus 348 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 376 (398)
T 1lfk_A 348 LGAALARLELRTVFTELWRRFPALRLADP 376 (398)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCTTCEESST
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEeCCC
Confidence 999999999999999999999 8998743
No 67
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=7.9e-57 Score=430.54 Aligned_cols=368 Identities=18% Similarity=0.217 Sum_probs=281.4
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhcccccc-C-CCCC--CCc---ceeeccCcceEec
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFA-S-RPRT--AAG---KYTTYNYSDMVWA 122 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~-~-~~~~--~~~---~~~~~~~~~~~~~ 122 (506)
.+..+|+..+.++ ++||||+++++ ++.++++++||+++++++.++ .|. + ++.. ... ......+.+ ++.
T Consensus 13 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 88 (396)
T 1n40_A 13 ARGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNN-MGN 88 (396)
T ss_dssp CCSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGH-HHH
T ss_pred ccccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhh-hhh
Confidence 3567899999999 99999999997 789999999999999999865 355 4 3321 111 011101122 222
Q ss_pred cCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccC
Q 010612 123 TYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQD 201 (506)
Q Consensus 123 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (506)
. .|+++||.+ .++|+++ ++.+.+.+.+.++++++.+.+. ++++|+..++ ..+++++++. +||.+.+.
T Consensus 89 ~---~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----- 156 (396)
T 1n40_A 89 I---ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQED----- 156 (396)
T ss_dssp H---HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred H---HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChhh-----
Confidence 2 899999998 5889999 9999999999999999998763 6689998665 5899999999 79987632
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHH
Q 010612 202 FVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLL 281 (506)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll 281 (506)
...+....+.+..... ..| .++..+..+.+ +++.+.++ + ....+|+++.|+
T Consensus 157 ---~~~~~~~~~~~~~~~~------~~p----------~~~~~~~~~~~-~~~~~~i~----~-----~~~~~dll~~ll 207 (396)
T 1n40_A 157 ---GPKLFRSLSIAFMSSA------DPI----------PAAKINWDRDI-EYMAGILE----N-----PNITTGLMGELS 207 (396)
T ss_dssp ---HHHHHHTHHHHTBCCS------SCC----------HHHHHHHHHHH-HHHHHHHH----C-----TTCCSHHHHHHH
T ss_pred ---HHHHHHHHHHHhcccc------CCC----------HHHHHHHHHHH-HHHHHHHh----C-----CCCCCCHHHHHH
Confidence 1344444443322100 011 13455566666 77777776 1 122468999999
Q ss_pred hcc-C-CC--ccccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHH
Q 010612 282 QLA-D-DP--TLEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAI 356 (506)
Q Consensus 282 ~~~-~-~~--~~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~ 356 (506)
+.. . ++ -.++.+ .....+++||+|||+++++|++++|++||++|+|+++|++ ||+||
T Consensus 208 ~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~ 269 (396)
T 1n40_A 208 RLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------LIPAG 269 (396)
T ss_dssp HHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHH
T ss_pred HhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------------HHHHH
Confidence 764 2 11 112222 2237899999999999999999999999999999999853 79999
Q ss_pred HHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 010612 357 VKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGA 436 (506)
Q Consensus 357 i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~ 436 (506)
|+|+||++|+++...+|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||++ ..++|||.
T Consensus 270 i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~ 340 (396)
T 1n40_A 270 VEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---------TSHLAFGR 340 (396)
T ss_dssp HHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------TCSSTTCC
T ss_pred HHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------CCCCCCCC
Confidence 999999999999666799999999999999999999999999999999999999999999963 35799999
Q ss_pred CCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEe
Q 010612 437 GRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVV 494 (506)
Q Consensus 437 G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (506)
|+|.|+|++||.+|++++++.|+++| ++++.++. .++.+ ..+...+....+.|+
T Consensus 341 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~ 395 (396)
T 1n40_A 341 GQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPI--DQLVW--RTRFQRRIPERLPVL 395 (396)
T ss_dssp GGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CCSBSBCCBSCCEEE
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCc--ccccc--ccccccCCcceeeee
Confidence 99999999999999999999999999 59987542 12222 234455555666665
No 68
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=1.6e-56 Score=432.75 Aligned_cols=381 Identities=19% Similarity=0.243 Sum_probs=292.1
Q ss_pred CCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcc-ee------eccCcceEecc
Q 010612 51 LMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK-YT------TYNYSDMVWAT 123 (506)
Q Consensus 51 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~ 123 (506)
.+..+|+.++.++ ++||||+++.+| +++|++|++++++++++ ..+++++...... .. .......++..
T Consensus 26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (418)
T 3r9b_A 26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL 100 (418)
T ss_dssp GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence 3578999999988 688999998766 89999999999999754 3333333221110 00 00112345667
Q ss_pred CChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCC
Q 010612 124 YGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDF 202 (506)
Q Consensus 124 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 202 (506)
+|+.|+++||.+ .++|+++.++.+.+.+.+.++++++ +.+ ++++|+...+ ..+++++++. +||.+....
T Consensus 101 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~----- 170 (418)
T 3r9b_A 101 DPPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIEDE----- 170 (418)
T ss_dssp CTTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----
T ss_pred CCchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHHHH-----
Confidence 799999999998 6999999999999999999999999 754 5589986555 6899999999 899876421
Q ss_pred CChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHh
Q 010612 203 VTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQ 282 (506)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~ 282 (506)
..+....+.+...... .+.+..+ +....++..+..+.+.+++.+.++++++.. .+|+++.|++
T Consensus 171 ---~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~d~l~~ll~ 233 (418)
T 3r9b_A 171 ---PKFSRASALLAAALDP------FLALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRTP-------GEDLMSGLVA 233 (418)
T ss_dssp ---HHHHHHHHHHHHTTSC------HHHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTSC-------CSSHHHHHHH
T ss_pred ---HHHHHHHHHHHhhcCc------ccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CccHHHHHHH
Confidence 3444444443322211 1111111 123356777888889999999998877542 4589999997
Q ss_pred ccCCCc--cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHH
Q 010612 283 LADDPT--LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKE 359 (506)
Q Consensus 283 ~~~~~~--~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E 359 (506)
...+.. .++.+ .....+++||+|||+++++|++++|++||++|+++++|++ |++|||+|
T Consensus 234 ~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E 295 (418)
T 3r9b_A 234 VEESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEE 295 (418)
T ss_dssp HHHHSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHH
T ss_pred hhhccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHH
Confidence 532211 12222 3337899999999999999999999999999999999864 69999999
Q ss_pred hhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCC
Q 010612 360 TMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRR 439 (506)
Q Consensus 360 tlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~ 439 (506)
+||++|+++... |.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|||+ ...++|||+|+|
T Consensus 296 ~lRl~p~~~~~~-R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG~G~r 364 (418)
T 3r9b_A 296 TMRYDPPVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFGKGAH 364 (418)
T ss_dssp HHHHSCSBCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGG
T ss_pred HHHhCCccccce-eEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCCCcCc
Confidence 999999999865 999999999999999999999999999999999999999999992 235799999999
Q ss_pred CCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 440 MCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 440 ~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
.|+|++||.+|++++++.|+++| ++++.++ .....+..+++...+.|++++|.
T Consensus 365 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-------~~~~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 365 FCLGAPLARLEATVALPALAARFPEARLSGE-------PEYKRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-------CEECSCSSBCCEEECEEEC----
T ss_pred cCccHHHHHHHHHHHHHHHHHhCccceeCCC-------CccccCCcccCcceeEEEecCCC
Confidence 99999999999999999999999 8988754 12234567777788999998874
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=1.4e-55 Score=425.09 Aligned_cols=377 Identities=16% Similarity=0.175 Sum_probs=287.8
Q ss_pred CCCChHHHHHHHhhcCCeeEEEe-cCccEEEecCHHHHHHHHhhccccccCCCC---CCCcc-----eeeccCcceEecc
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRF-GSFPVVVGSSVEMAKLFLKIHDANFASRPR---TAAGK-----YTTYNYSDMVWAT 123 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~ 123 (506)
..+|+..+.++.++ |||+++.. ++.++++|+++++++++++++ ..|++.+. ..... ........+++..
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccccc
Confidence 35688999998776 99999987 557799999999999999865 34554331 11111 1111122446677
Q ss_pred CChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCC
Q 010612 124 YGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDF 202 (506)
Q Consensus 124 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 202 (506)
+|+.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+.. ++++|+..++ ..++.++++. +||.+....
T Consensus 115 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~----- 185 (426)
T 3rwl_A 115 DRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLPV--GEEFDWVDRVSIEITTQMLAT-LFDFPFEER----- 185 (426)
T ss_dssp CTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSCS--SSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT-----
T ss_pred CchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhc--CCCcchHHHHHHHHHHHHHHH-HcCCCHHHH-----
Confidence 899999999998 69999999999999999999999998844 6789987776 6888888886 799764221
Q ss_pred CChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHh
Q 010612 203 VTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQ 282 (506)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~ 282 (506)
..+....+.+... +... .....+...+..+.+.+++.+.+++++.. ...+|+++.|++
T Consensus 186 ---~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~~dll~~ll~ 243 (426)
T 3rwl_A 186 ---RKLTRWSDVTTAA----------PGGG---VVESWDQRKTELLECAAYFQVLWNERVNK------DPGNDLISMLAH 243 (426)
T ss_dssp ---HHHHHHHHHHTCC----------TTSS---SCSSHHHHHHHHHHHHHHHHHHHHHHHTS------CCCSSHHHHHHH
T ss_pred ---HHHHHHHHHHHhc----------cCcc---ccccHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCCHHHHHHh
Confidence 3333332222110 0000 01123455667788888999988887322 235689999998
Q ss_pred ccCCCc-cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHh
Q 010612 283 LADDPT-LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKET 360 (506)
Q Consensus 283 ~~~~~~-~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Et 360 (506)
...+.. .++++ .....+++||+|||+++++|++++|++||++|+++++|+ +|++|||+|+
T Consensus 244 ~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~------------------~~l~a~i~E~ 305 (426)
T 3rwl_A 244 SPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP------------------ALVETMVPEI 305 (426)
T ss_dssp CGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhHHHHHHHH
Confidence 654321 12222 223789999999999999999999999999999999974 4899999999
Q ss_pred hccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCC
Q 010612 361 MRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRM 440 (506)
Q Consensus 361 lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~ 440 (506)
||++|+++. .+|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.. ..++|||.|+|.
T Consensus 306 LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~FG~G~r~ 375 (426)
T 3rwl_A 306 IRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSFGFGIHR 375 (426)
T ss_dssp HHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTTCCSTTS
T ss_pred HHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CCccCCCCCCcC
Confidence 999999997 4599999999999999999999999999999999999999999999942 357999999999
Q ss_pred CcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 441 CPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 441 C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
|+|++||.+|++++++.|+++| ++++.++. .. ..+...+....+.|+++|
T Consensus 376 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~--~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 376 CVGNRLAEMQLRILWEEILTRFSRIEVMAEP-----ER--VRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCSEEEECSCC-----EE--CCCSSBCCEEECEEEEEC
T ss_pred CccHHHHHHHHHHHHHHHHHhCccCeeCCCC-----cc--cccccccCcceeeEEEeC
Confidence 9999999999999999999999 99987542 12 123344454567777764
No 70
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=3.4e-55 Score=415.28 Aligned_cols=357 Identities=17% Similarity=0.201 Sum_probs=272.8
Q ss_pred ChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCC-----CCCc--ce--eeccCcceEeccCCh
Q 010612 56 PHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPR-----TAAG--KY--TTYNYSDMVWATYGP 126 (506)
Q Consensus 56 ~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-----~~~~--~~--~~~~~~~~~~~~~g~ 126 (506)
|+..+.++ ++||||+++ | +.+++++|+++++++.++ ..|++++. .... .. ........++..+|+
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 74 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP 74 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCCh
Confidence 45677777 599999987 4 579999999999999864 45766653 1100 01 110011345667899
Q ss_pred hHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCCh
Q 010612 127 YWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTP 205 (506)
Q Consensus 127 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (506)
.|+++|+.+ .++|+++.++.+.+.+.+.++++++.+ + ++++|+.+++ ..+++++++.+ ||.+.+..
T Consensus 75 ~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~--~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------- 141 (368)
T 1io7_A 75 LHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-D--PREDDIVKKLAVPLPIIVISKI-LGLPIEDK-------- 141 (368)
T ss_dssp HHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-C--TTSEEHHHHTTTHHHHHHHHHH-HTCCGGGH--------
T ss_pred HHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-h--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH--------
Confidence 999999998 689999999999999999999999999 4 3479999876 78999999999 99876321
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 206 QEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
..+....+.+. ... ..|. ..++..+..+.+.+++.+.+ . ..+|+++.|++.
T Consensus 142 ~~~~~~~~~~~------~~~-~~p~--------~~~~~~~~~~~~~~~~~~~i-----~-------~~~d~l~~ll~~-- 192 (368)
T 1io7_A 142 EKFKEWSDLVA------FRL-GKPG--------EIFELGKKYLELIGYVKDHL-----N-------SGTEVVSRVVNS-- 192 (368)
T ss_dssp HHHHHHGGGCT------TSC-CCTT--------CHHHHHHHHHHHHHHHHHHT-----T-------SSCHHHHHHHTS--
T ss_pred HHHHHHHHHHH------hcc-CChH--------HHHHHHHHHHHHHHHHHHHh-----C-------CCCCHHHHHHhc--
Confidence 22222211111 000 0121 12345556666777776665 1 135899999976
Q ss_pred CCccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCC
Q 010612 286 DPTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHP 365 (506)
Q Consensus 286 ~~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~ 365 (506)
..+.++.......+++||+|||+++++|++++|++|| +|+|+++| + |++|||+|+||++|
T Consensus 193 ~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl~p 252 (368)
T 1io7_A 193 NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRYSP 252 (368)
T ss_dssp SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHhCc
Confidence 2221223334488999999999999999999999999 99999998 2 69999999999999
Q ss_pred CCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchh
Q 010612 366 VAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYD 445 (506)
Q Consensus 366 ~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~ 445 (506)
+++ ..+|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|||| + ..++|||.|+|.|+|++
T Consensus 253 ~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------~~~~~FG~G~r~C~G~~ 321 (368)
T 1io7_A 253 PVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN--P--------NPHLSFGSGIHLCLGAP 321 (368)
T ss_dssp SBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC--S--------CCCCTTCCGGGSCTTHH
T ss_pred ccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC--C--------CCCcCCCCCccCCCCHH
Confidence 999 456999999999999999999999999999999999999999999994 1 24799999999999999
Q ss_pred hHHHHHHHHHHhhhhcce-eecCCCCCCCCCCcccccCCCCCCCCCceEeeccCC
Q 010612 446 LGLKVIQTSLSNLLQCFE-WKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQPRL 499 (506)
Q Consensus 446 lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 499 (506)
||.+|++++++.|+++|+ +++.+ . .+. .+...++...+.|++++|+
T Consensus 322 lA~~e~~~~l~~ll~~f~~~~~~~-~-----~~~--~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 322 LARLEARIAIEEFSKRFRHIEILD-T-----EKV--PNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEE-E-----EEC--CCSSBCCEEEEEEEEEC--
T ss_pred HHHHHHHHHHHHHHHhCCCCEecC-c-----eec--cCCcccCCceeEEEeccCC
Confidence 999999999999999996 98864 1 122 2345556678999999884
No 71
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=7.2e-55 Score=412.29 Aligned_cols=355 Identities=18% Similarity=0.171 Sum_probs=273.7
Q ss_pred ChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCC-CC-Cc-----ceeeccC--cceEeccCCh
Q 010612 56 PHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPR-TA-AG-----KYTTYNY--SDMVWATYGP 126 (506)
Q Consensus 56 ~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~-~~-----~~~~~~~--~~~~~~~~g~ 126 (506)
|+..+.++ ++||||+++. | .+++++|+++++++.++ ..|++++. .. .. .....+. ...++..+|+
T Consensus 1 p~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 74 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP 74 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred CCHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCch
Confidence 45667777 5899999988 3 79999999999999865 36666532 11 11 1011111 1335566899
Q ss_pred hHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCCh
Q 010612 127 YWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTP 205 (506)
Q Consensus 127 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (506)
.|+++||.+ .++|+++.++. +.+.+.++++++.+. | ++|+..++ ..+++++|+. +||.+ + ..
T Consensus 75 ~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~---g-~~d~~~~~~~~~~~~vi~~-~~G~~-~-~~------- 137 (367)
T 3b4x_A 75 LHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD---E-EFDVIESFAIPLPILVISK-MLGIN-P-DV------- 137 (367)
T ss_dssp HHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC---S-EEEHHHHTTTHHHHHHHHH-HHTCC-C-CH-------
T ss_pred hHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc---C-CcchHHHHHHhhHHHHHHH-HcCCC-C-cH-------
Confidence 999999998 68999999988 899999999998875 3 49999765 8999999999 79988 3 11
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccC
Q 010612 206 QEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLAD 285 (506)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~ 285 (506)
..+....+.+..... ..|.. .+.. +..+.+.+++.+.++++++.. .+|+++.|++.
T Consensus 138 ~~~~~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~-- 193 (367)
T 3b4x_A 138 KKVKDWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKGKE-------IVDLTGKIANS-- 193 (367)
T ss_dssp HHHHHHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTTTC-------CSSHHHHHHTS--
T ss_pred HHHHHHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhcCC-------CCCHHHHHHhc--
Confidence 445555555443211 02211 0112 456677788888888776532 35899999976
Q ss_pred CCccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCC
Q 010612 286 DPTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHP 365 (506)
Q Consensus 286 ~~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~ 365 (506)
..+.++.......+++||+|||+++++|++++|++ |++|+++++|++ +|||+|+||++|
T Consensus 194 ~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl~p 252 (367)
T 3b4x_A 194 NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRFSP 252 (367)
T ss_dssp SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHhcC
Confidence 22212233344889999999999999999999999 999999999863 899999999999
Q ss_pred CCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchh
Q 010612 366 VAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYD 445 (506)
Q Consensus 366 ~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~ 445 (506)
+++ ..+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++
T Consensus 253 ~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~ 321 (367)
T 3b4x_A 253 PVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------NPHLSFGSGIHLCLGAP 321 (367)
T ss_dssp SBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTSCTTHH
T ss_pred ccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------CCCcCCCCCCccCccHH
Confidence 999 5569999999999999999999999999999999999999999999984 25799999999999999
Q ss_pred hHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 446 LGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 446 lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
||.+|++++++.|+++| ++++.++ .+. .+...+....+.|++++
T Consensus 322 lA~~e~~~~l~~ll~~f~~~~l~~~------~~~--~~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 322 LARLEARIALEEFAKKFRVKEIVKK------EKI--DNEVLNGYRKLVVRVER 366 (367)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEE------EEC--CCSSBCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCceeCCc------ccc--ccccccCcceEEEEecC
Confidence 99999999999999999 7998642 122 23444555677777754
No 72
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=4.8e-55 Score=420.72 Aligned_cols=385 Identities=15% Similarity=0.194 Sum_probs=289.0
Q ss_pred CCceeecCcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcc----eeeccCc
Q 010612 42 PWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGK----YTTYNYS 117 (506)
Q Consensus 42 ~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~ 117 (506)
.+|.+++. ...+|+.+ +..++|||++++.+++.. ++|++++++++++.++...+..+....... .......
T Consensus 23 ~lp~~~~~--~~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (416)
T 3p3o_A 23 DLPFLDFT--DPNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMV 97 (416)
T ss_dssp TCCBCCTT--STTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHH
T ss_pred CCCCCCcc--cccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhc
Confidence 45555533 35678888 556789999999987766 999999999999986642221110000000 0000012
Q ss_pred ceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHH-HHHHHHHHHHHHhhcccccc
Q 010612 118 DMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDH-LSKLSLNVISRMVLGKNYTE 196 (506)
Q Consensus 118 ~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~ 196 (506)
++++..+|+.|+++||.+ .++|+++.++.+.+.+.+.++++++.+ + ++++|+... ...+++++|+. +||.+...
T Consensus 98 ~~l~~~dg~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~ 172 (416)
T 3p3o_A 98 DFLQSLDGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPLED 172 (416)
T ss_dssp HSGGGCCHHHHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred CccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCHHH
Confidence 456778899999999998 699999999999999999999999999 4 445997555 45799999998 58876421
Q ss_pred ccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccH
Q 010612 197 ETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDM 276 (506)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dl 276 (506)
. ..+....+.+.... ... ......+...+..+.+.+++.+.++++++.. .+|+
T Consensus 173 ~--------~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------~~dl 225 (416)
T 3p3o_A 173 Y--------DTVGRLSIETNLGL---------ALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP-------GDDL 225 (416)
T ss_dssp H--------HHHHHHHHTTCGGG---------TTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSH
T ss_pred H--------HHHHHHHHHHHhhc---------ccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-------CccH
Confidence 1 23333322221111 000 0122346677888889999999999887652 4589
Q ss_pred HHHHHhccCCCc-cccch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHH
Q 010612 277 VDVLLQLADDPT-LEFKL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYID 354 (506)
Q Consensus 277 l~~ll~~~~~~~-~~~~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~ 354 (506)
++.|++...++. .++++ .....+++||+|||+++++|++++|++||++|+++++|++ |++
T Consensus 226 l~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~ 287 (416)
T 3p3o_A 226 TSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAP 287 (416)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHH
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHH
Confidence 999997654321 12222 3337899999999999999999999999999999999874 799
Q ss_pred HHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 010612 355 AIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPF 434 (506)
Q Consensus 355 a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~F 434 (506)
+||+|+||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||.. ..++||
T Consensus 288 a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~~l~F 358 (416)
T 3p3o_A 288 QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------APSIAF 358 (416)
T ss_dssp HHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SCCCTT
T ss_pred HHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CCeecC
Confidence 99999999999997667799999999999999999999999999999999999999999999832 247999
Q ss_pred CCCCCCCcchhhHHHHHHHHHHhhhhcce-eecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 435 GAGRRMCPGYDLGLKVIQTSLSNLLQCFE-WKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 435 g~G~~~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
|.|+|.|+|++||.+|++++++.|+++|+ +++.++. .+. .+...+....+.|++++
T Consensus 359 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~~--~~~~~~g~~~lpv~~~p 415 (416)
T 3p3o_A 359 GGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI-----TWR--HELGVAGPDALPLRFGA 415 (416)
T ss_dssp CCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC-----EEC--CCTTCCCEEECEEEESC
T ss_pred CCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC-----cee--cCCCccCcceeeEEEec
Confidence 99999999999999999999999999995 8876541 232 23334444556676653
No 73
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=5.7e-54 Score=410.17 Aligned_cols=353 Identities=20% Similarity=0.241 Sum_probs=274.5
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHHHH
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQAR 132 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (506)
..+|+..+.++.+ +|||+++..| .++++++++++++++++ .|+.++...... ........++..+|+.|+++|
T Consensus 19 ~~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~-~~~~~~~~l~~~dg~~h~~~R 91 (394)
T 2wiy_A 19 RNNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAG-PWAVASDTALGSDPPHHTVLR 91 (394)
T ss_dssp HHCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCG-GGGGGGGSGGGCCTTHHHHHH
T ss_pred ccCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccc-cchhcccccccCCchHHHHHH
Confidence 3588999988855 5899987643 58999999999999753 343321110000 001112346777899999999
Q ss_pred HHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhccccccccccCCCChHHHHHHH
Q 010612 133 KIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHLSKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEML 212 (506)
Q Consensus 133 ~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 212 (506)
+.+ .++|+++.++.+.+.+.+.++++++.+.. ++++|+...+..+++++++..+||.+.+. ...+...+
T Consensus 92 ~~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--------~~~~~~~~ 160 (394)
T 2wiy_A 92 RQT-NKWFTPKLVDGWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPEDD--------ADAVMEAM 160 (394)
T ss_dssp HHH-HTTCSHHHHHHHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCCC--------HHHHHHHH
T ss_pred HHH-HhccCHHHHHHHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHhH--------HHHHHHHH
Confidence 998 69999999999999999999999988764 67899999999999999999999986531 13343333
Q ss_pred HHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc-ccc
Q 010612 213 QELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT-LEF 291 (506)
Q Consensus 213 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~-~~~ 291 (506)
...... ....|.. ....+.....+.+.+++.+.++++++.. .+|+++.|++...++. .++
T Consensus 161 ~~~~~~------~~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~Ll~~~~~~~ls~~ 221 (394)
T 2wiy_A 161 FEAMLM------QSAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVNP-------GDGLADSLLDAARAGEITES 221 (394)
T ss_dssp HHHHGG------GSSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHHHTTSSCHH
T ss_pred HHHHHh------ccCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcCC-------CCcHHHHHHHhhhcCCCCHH
Confidence 222211 0111211 1224455566778888888888876542 2479999987543221 122
Q ss_pred ch-hhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCccc
Q 010612 292 KL-ERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAPML 370 (506)
Q Consensus 292 ~~-~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~ 370 (506)
++ .....+++||+|||+++++|++++|++||++|+++++|+ +|++|||+|+||++||++..
T Consensus 222 el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~LRl~pp~~~~ 283 (394)
T 2wiy_A 222 EAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE------------------SARAAIINEMVRMDPPQLSF 283 (394)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEE
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHhhCCCccCe
Confidence 22 333789999999999999999999999999999999976 36999999999999999865
Q ss_pred cceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHH
Q 010612 371 VPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKV 450 (506)
Q Consensus 371 ~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e 450 (506)
+|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||++. ..++|||+|+|.|+|++||.+|
T Consensus 284 -~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~~e 354 (394)
T 2wiy_A 284 -LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQIISRAE 354 (394)
T ss_dssp -EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHHHH
T ss_pred -eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcHHHHHHH
Confidence 5999999999999999999999999999999999999999999999742 2479999999999999999999
Q ss_pred HHHHHHhhhhcce-eecCCC
Q 010612 451 IQTSLSNLLQCFE-WKLPGD 469 (506)
Q Consensus 451 ~~~~l~~ll~~f~-~~~~~~ 469 (506)
++++++.|+++|+ +++.++
T Consensus 355 ~~~~l~~ll~~~~~~~l~~~ 374 (394)
T 2wiy_A 355 ATTVFAVLAERYERIELAEE 374 (394)
T ss_dssp HHHHHHHHHHHCSCEEESSC
T ss_pred HHHHHHHHHHhCCCceECCC
Confidence 9999999999998 898754
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.8e-54 Score=403.99 Aligned_cols=317 Identities=20% Similarity=0.215 Sum_probs=248.8
Q ss_pred hhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHHHHHHHhhccCChhh
Q 010612 65 QKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKR 144 (506)
Q Consensus 65 ~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~ 144 (506)
++||||+++ | +++++||+++++++.++ ..|++++..... ..+ ...++..+|+.|+++||.+ .++|+++.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~---~~~-~~~l~~~~g~~~~~~R~~~-~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS---NAG-GISFITMDNPEHKEFRDIS-APYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-------CCGGGGCCHHHHHHHHHHH-HHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC---Ccc-ccccccCCchHHHHHHHHh-hhhcCHHH
Confidence 689999986 3 89999999999999875 367766521111 111 2345567899999999998 68999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhcccc
Q 010612 145 LESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLE 223 (506)
Q Consensus 145 l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (506)
++.+.+.+.++++++++.+. ++|+.+++ ..+++++++.+ ||.+.+. . ..+....+.+...
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~-------~~~~~~~~~~~~~----- 131 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDSD-M-------PLFKLWSDYIIGN----- 131 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGGG-H-------HHHHHHHHHHHTS-----
T ss_pred HHHHHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHHH-H-------HHHHHHHHHHhhc-----
Confidence 99999999999999998775 69998865 89999999998 9987632 1 3444444444321
Q ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc--cccch-hhhhhhH
Q 010612 224 IGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT--LEFKL-ERDQDLL 300 (506)
Q Consensus 224 ~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~~-~~~~~~~ 300 (506)
..|.+. ..++. +..+.+.+++.+.+ .+| ++.|++...++. .++.+ .....++
T Consensus 132 ---~~p~~~------~~~~~-~~~~~~~~~~~~~i--------------~~d-l~~ll~~~~~~~~l~~~ei~~~~~~~~ 186 (343)
T 2rfb_A 132 ---KRDENF------NYVNN-RMVSRLLEIFKSDS--------------HGI-INVLAGSSLKNRKLTMDEKIKYIMLLI 186 (343)
T ss_dssp ---CCSSHH------HHHHH-HHHHHHHHHHHSCC--------------SSH-HHHHHTCBCSSSBCCHHHHHHHHHHHH
T ss_pred ---cCcchh------hHHHH-HHHHHHHHHHHHHH--------------hcc-HHHHHhhhcCCCCCCHHHHHHHHHHHH
Confidence 113210 11223 44445555444333 246 888987643321 12222 2237899
Q ss_pred hccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCC-ccccceeeccce
Q 010612 301 AGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVA-PMLVPRFARENC 379 (506)
Q Consensus 301 ~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~-~~~~~R~~~~~~ 379 (506)
+||+|||+++++|++++|++||++|+|+++|+ +|||+|+||++|++ + ..+|.+.+|+
T Consensus 187 ~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R~~~~d~ 244 (343)
T 2rfb_A 187 IGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHRFAAEDS 244 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCCEESSCE
T ss_pred HHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccceEECCCe
Confidence 99999999999999999999999999999985 89999999999999 8 5569999999
Q ss_pred eEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhh
Q 010612 380 KVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLL 459 (506)
Q Consensus 380 ~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll 459 (506)
+++|+.||||+.|.++.+++||||++|+||++|+|||| ..++|||.|+|.|+|++||.+|++++++.|+
T Consensus 245 ~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll 313 (343)
T 2rfb_A 245 YINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASIALNDIL 313 (343)
T ss_dssp EETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred EECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999995 1479999999999999999999999999999
Q ss_pred hcce-eecCCC
Q 010612 460 QCFE-WKLPGD 469 (506)
Q Consensus 460 ~~f~-~~~~~~ 469 (506)
++|+ ++++++
T Consensus 314 ~~f~~~~~~~~ 324 (343)
T 2rfb_A 314 NHFKRIKIDYK 324 (343)
T ss_dssp HHCSCCCBCTT
T ss_pred HhCCCceeCCC
Confidence 9996 998764
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=1.6e-52 Score=401.92 Aligned_cols=384 Identities=16% Similarity=0.176 Sum_probs=274.1
Q ss_pred CCCCceeec---CcCCCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCC---cceee
Q 010612 40 PCPWPIIGN---LNLMGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAA---GKYTT 113 (506)
Q Consensus 40 p~~~p~~G~---~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~---~~~~~ 113 (506)
+.++|.+|. ...+..||+.++.++. ++|||+++ ++..+++|++++++++++.++. .|+....... .....
T Consensus 17 ~~~~P~~~~dp~~~~~~~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~ 92 (412)
T 4dnj_A 17 GAGVPHLGIDPFALDYFADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKP 92 (412)
T ss_dssp STTSCEECCCTTSHHHHHSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCC
T ss_pred CCCCCccCCCCCCHHHHhCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccccc
Confidence 345788873 2234678999998875 57999754 5667899999999999997553 3333221111 11111
Q ss_pred ccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeh-HHHHHHHHHHHHHHHhhcc
Q 010612 114 YNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHL-KDHLSKLSLNVISRMVLGK 192 (506)
Q Consensus 114 ~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl-~~~~~~~~~~vi~~~~fG~ 192 (506)
....+.++..||++|+++||.+ .++|++++++.+.+.+.+.++++++.+.+. ++++|+ .++...+++++++.++...
T Consensus 93 ~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~-~~~~D~v~~~~~~~~~~~i~~l~g~~ 170 (412)
T 4dnj_A 93 WRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLAR-GGNIDAIADLAEAYPLSVFPDAMGLK 170 (412)
T ss_dssp SSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEETCCCCCCHHHHHHHHHHHTCC
T ss_pred ccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhcc-CCCceeHHHHHhhhhHhHHHHHcCCc
Confidence 1223456778899999999998 699999999999999999999999998764 456775 5667788889998875433
Q ss_pred ccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 010612 193 NYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFV 272 (506)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~ 272 (506)
.... ..+......+....... .............+.. .+.++.++.. .
T Consensus 171 ~~~~---------~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~~----~- 218 (412)
T 4dnj_A 171 QEGR---------ENLLPYAGLVFNAFGPP--------------NELRQSAIERSAPHQA----YVAEQCQRPN----L- 218 (412)
T ss_dssp STTG---------GGHHHHHHHHHHHTSCS--------------SHHHHHHHHTCHHHHH----HHHHHTSGGG----S-
T ss_pred hhhh---------hhhhhhhhccccccccc--------------HHHHHHHHHHHHHHHH----HHHHHHHhhc----c-
Confidence 3221 22333333333221110 0111112222222222 2222222221 1
Q ss_pred cccHHHHHHhccCCCc--c-ccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCC
Q 010612 273 ASDMVDVLLQLADDPT--L-EFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVD 349 (506)
Q Consensus 273 ~~dll~~ll~~~~~~~--~-~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~ 349 (506)
..+.+..++....+.. . ++.......+++||+|||+++++|++++|++||++|+||++|
T Consensus 219 ~~~~~~~l~~~~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~------------------ 280 (412)
T 4dnj_A 219 APGGFGACIHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD------------------ 280 (412)
T ss_dssp CTTSHHHHHHHTTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------
T ss_pred ccccchhhhHhhhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC------------------
Confidence 1233444544333321 1 222233388999999999999999999999999999999985
Q ss_pred ChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 010612 350 LPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDF 429 (506)
Q Consensus 350 lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~ 429 (506)
..++.++++|++|++|+++... |.+++|++|+|+.||||+.|.++.+++||||++|+||++|+||||..
T Consensus 281 ~~~~~~~~eE~lR~~pp~~~~~-R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~---------- 349 (412)
T 4dnj_A 281 PSLARNAFEEAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS---------- 349 (412)
T ss_dssp GGGHHHHHHHHHHHHCSBCEEE-EEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT----------
T ss_pred ccccccccceeeeecCCccccc-ccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCCC----------
Confidence 3568999999999999999765 99999999999999999999999999999999999999999999832
Q ss_pred ccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCCCCCCCCCcccccCCCCCCCCCceEeecc
Q 010612 430 ELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGDMKKEDLDMEESFGLSTPKKIPLLVVPQP 497 (506)
Q Consensus 430 ~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (506)
.|+|||+|+|.|+|++||++|++++++.|+++| ++++.++ ... ..+.++++...+.|+++|
T Consensus 350 ~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~-----~~~--~~~~~~rg~~~LpV~~tP 411 (412)
T 4dnj_A 350 GHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP-----LKR--RFNNTLRGLESLPIQLTP 411 (412)
T ss_dssp TCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-----CEE--EECSSBEEEEECEEEEEE
T ss_pred CCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC-----Cee--ecCCCccCCcceeEEEEe
Confidence 479999999999999999999999999999999 8988754 122 345566666778888875
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=1.5e-47 Score=366.44 Aligned_cols=353 Identities=12% Similarity=0.082 Sum_probs=257.1
Q ss_pred CCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCcceeeccCcceEeccCChhHHHHH
Q 010612 53 GSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAGKYTTYNYSDMVWATYGPYWRQAR 132 (506)
Q Consensus 53 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (506)
..+|+..+.++.+..++.+.....+..+++|+.++++++++.++ ..|+......... ........+...|+++|+++|
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~R 113 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPYR 113 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCCCEEEECCHHHHHHHHcCc-hhccCCCcccccc-cccccccCcccCCcHHHHHHH
Confidence 35677778887665443332222333578999999999999754 3455433221111 111122344567899999999
Q ss_pred HHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHHHHHHHHHhhccccccccccCCCChHHHHHH
Q 010612 133 KIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLSLNVISRMVLGKNYTEETEQDFVTPQEYTEM 211 (506)
Q Consensus 133 ~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 211 (506)
|++ .++|++++++.+.+.+.+.++++++.+.+ ++++|+...+ ..+...+++.+ +|..... ...+.+.
T Consensus 114 rll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~~l-lg~~~~d--------~~~~~~~ 181 (417)
T 4dxy_A 114 KAL-DKGLNLAKIRKVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFMAL-ADLPLED--------IPVLSEY 181 (417)
T ss_dssp HHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHHHH-TTCCGGG--------HHHHHHH
T ss_pred HHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHHHH-cCCCHHH--------HHHHHhh
Confidence 998 69999999999999999999999999877 5678875554 56677777664 6665421 1344444
Q ss_pred HHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccHHHHHHhccCCCc--c
Q 010612 212 LQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEHNAKRKSSTGFVASDMVDVLLQLADDPT--L 289 (506)
Q Consensus 212 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~ 289 (506)
...+..... ..+...........+.+..++.+.++++++.. .+|+++.|+....++. .
T Consensus 182 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~-------~ddl~s~L~~~~~~~~~~~ 241 (417)
T 4dxy_A 182 ARQMTRPEG-------------NTPEEMATDLEAGNNGFYAYVDPIIRARVGGD-------GDDLITLMVNSEINGERIA 241 (417)
T ss_dssp HHHHHSCCC-------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------CCSHHHHHHTCEETTEECC
T ss_pred hhhhccccc-------------cChHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------ccchhhhhccccccCCccc
Confidence 433321110 00122234566677778888888887775442 4689999997655432 1
Q ss_pred ccc-hhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCcCcccCCCChhHHHHHHHhhccCCCCc
Q 010612 290 EFK-LERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRLVEEKDIVDLPYIDAIVKETMRLHPVAP 368 (506)
Q Consensus 290 ~~~-~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~ 368 (506)
++. ......+++||+|||+++++|++++|++||++|+++++|...+ ..++ |.+|++++.+
T Consensus 242 ~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~av-ee~~~~~~~~ 302 (417)
T 4dxy_A 242 HDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGA-EEMFRRFPVV 302 (417)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTH-HHHHHHSCCB
T ss_pred hhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccce-eeeecccccc
Confidence 122 2233789999999999999999999999999999999986643 2233 4444444444
Q ss_pred cccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcchhhHH
Q 010612 369 MLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKEIDVKGHDFELLPFGAGRRMCPGYDLGL 448 (506)
Q Consensus 369 ~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~ 448 (506)
.. +|.+++|++++|+.||+|+.|.++.+++||||++|+||++|||+|+ ...++|||+|+|.|+|++||.
T Consensus 303 ~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~ClG~~LA~ 371 (417)
T 4dxy_A 303 SE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCAGMHLAR 371 (417)
T ss_dssp EE-EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHH
T ss_pred cc-ccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCccHHHHH
Confidence 44 4999999999999999999999999999999999999999999994 235799999999999999999
Q ss_pred HHHHHHHHhhhhcc-eeecCCC
Q 010612 449 KVIQTSLSNLLQCF-EWKLPGD 469 (506)
Q Consensus 449 ~e~~~~l~~ll~~f-~~~~~~~ 469 (506)
+|++++|+.|+++| +++++++
T Consensus 372 ~E~~i~l~~Ll~rfp~~~l~~~ 393 (417)
T 4dxy_A 372 MEVIVTLEEWLKRIPEFSFKEG 393 (417)
T ss_dssp HHHHHHHHHHHHHCSSCEECTT
T ss_pred HHHHHHHHHHHHhCCCceeCCC
Confidence 99999999999999 9998766
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.6e-47 Score=357.63 Aligned_cols=312 Identities=16% Similarity=0.137 Sum_probs=214.9
Q ss_pred CCCC-CCCCceeecCcC-----CCCCChHHHHHHHhhcCCeeEEEecCccEEEecCHHHHHHHHhhccccccCCCCCCCc
Q 010612 36 LPPG-PCPWPIIGNLNL-----MGSLPHRSIHSLSQKYGPIMQLRFGSFPVVVGSSVEMAKLFLKIHDANFASRPRTAAG 109 (506)
Q Consensus 36 ~ppg-p~~~p~~G~~~~-----~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~ 109 (506)
.||| ++++|++|+... +..+|+.++.+++++ ||++.. .+.+++++++++++++.++ .|++.+.....
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4666 446899998644 467899999998866 998765 3579999999999999853 46554321100
Q ss_pred c-------eeeccCcceEeccCChhHHHHHHHHhhccCChhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHH-HHHH
Q 010612 110 K-------YTTYNYSDMVWATYGPYWRQARKIFLIEIFSPKRLESFEFIRVQEIKKFLFGLYKSSAKPVHLKDHL-SKLS 181 (506)
Q Consensus 110 ~-------~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~-~~~~ 181 (506)
. ....+ ..+...+|+.| .++|+ . .+.+.+.++++++.+. +++|+...+ ..++
T Consensus 108 ~~~~~~~~~~~~~--~~l~~~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~ 167 (381)
T 2yjn_B 108 WMRAAGAPPAEWA--QPFRDVHAASW--------EGEVP-----D-VGELAESFAGLLPGAG----ARLDLVGDFAWQVP 167 (381)
T ss_dssp HHHHHTCCHHHHT--HHHHHHHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC----------CCCCCCTHHH
T ss_pred cccccccccchhh--hhhhhCCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc----CcchHHHHHHHHHH
Confidence 0 00011 23445568887 36777 2 6788888888888775 369988665 7999
Q ss_pred HHHHHHHhhccccccccccCCCChHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHh
Q 010612 182 LNVISRMVLGKNYTEETEQDFVTPQEYTEMLQELFYLNGVLEIGDSIPWLGFLDLQGHIKRMKALMKKLDRFYELVLHEH 261 (506)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 261 (506)
+++|+++ ||.+.+. . ...+.+..... .+ ..+.. ..+. . +
T Consensus 168 ~~vi~~l-~G~~~~~---------~---~~~~~~~~~~~-------~~----~~~~~-~~~~---~----~--------- 206 (381)
T 2yjn_B 168 VQGMTAV-LGAAGVL---------R---GAAWDARVSLD-------AQ----LSPQQ-LAVT---E----A--------- 206 (381)
T ss_dssp HHHHHTC------CC---------H---HHHHHHTTHHH-------HT----TSCCC-HHHH---H----H---------
T ss_pred HHHHHHH-cCCCHHH---------H---HHHHHHHHhcc-------CC----CCHHH-HHHH---H----H---------
Confidence 9999995 9987632 1 11222111000 00 00000 0000 0 0
Q ss_pred hhhccCCCCCCcccHHHHHHhccCCCccccchhhhhhhHhccccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCC
Q 010612 262 NAKRKSSTGFVASDMVDVLLQLADDPTLEFKLERDQDLLAGGTESSTVTLEWAISELMKKPEIFDKATKELDRVIGRNRL 341 (506)
Q Consensus 262 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~ 341 (506)
.++.++. .....+++||+|||+++++|++++|++||++|+++++|++
T Consensus 207 --------------~~~~l~~-----------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------- 253 (381)
T 2yjn_B 207 --------------AVAALPA-----------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA-------- 253 (381)
T ss_dssp --------------HHHHCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--------
T ss_pred --------------HHHHHHH-----------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH--------
Confidence 0111110 3347799999999999999999999999999999999763
Q ss_pred cCcccCCCChhHHHHHHHhhccCCCCccccceeeccceeEeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCC
Q 010612 342 VEEKDIVDLPYIDAIVKETMRLHPVAPMLVPRFARENCKVAGYDIPKNTRVLVNVWAIGRDPTIWENPNEFRPERFFGKE 421 (506)
Q Consensus 342 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~ 421 (506)
|+++||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||++
T Consensus 254 ----------~l~~~i~E~LR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~-- 320 (381)
T 2yjn_B 254 ----------AAQRTVAEVLRLHPALHLE-RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA-- 320 (381)
T ss_dssp ------------HHHHHHHHHHSCSCSEE-EEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC--
T ss_pred ----------HHHHHhCeeeeecCCCcce-eEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC--
Confidence 8999999999999999974 599999999999999999999999999999999999999999999974
Q ss_pred CCCCCCccccccCCCCCCCCcchhhHHHHHHHHHHhhhhcc-eeecCCC
Q 010612 422 IDVKGHDFELLPFGAGRRMCPGYDLGLKVIQTSLSNLLQCF-EWKLPGD 469 (506)
Q Consensus 422 ~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 469 (506)
..++|||+| |.|+|++||.+|++++++.|+++| ++++.++
T Consensus 321 -------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~ 361 (381)
T 2yjn_B 321 -------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP 361 (381)
T ss_dssp -------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred -------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence 357999999 999999999999999999999999 9998765
No 78
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=69.29 E-value=15 Score=24.59 Aligned_cols=51 Identities=20% Similarity=0.213 Sum_probs=37.0
Q ss_pred eeecCcCCCCC----ChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSL----PHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~----~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..-..+ ..+.++++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 56777543322 347788999999999888765 3457777899998888863
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=68.29 E-value=23 Score=25.13 Aligned_cols=51 Identities=20% Similarity=0.206 Sum_probs=37.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHhhc
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~~ 96 (506)
=++|++..- -..+.+.++..+||+|..+.+. |.-+|...+++.+..++..+
T Consensus 14 lfV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~ 72 (103)
T 1s79_A 14 VYIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 72 (103)
T ss_dssp EEEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred EEEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence 466766443 2357788999999999888764 34577889999999988743
No 80
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.42 E-value=8.4 Score=27.06 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=38.1
Q ss_pred ceeecCcCCCCC--ChHHHHHHHhhcC-CeeEEEecCccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSL--PHRSIHSLSQKYG-PIMQLRFGSFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~--~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~~~~i~~ 94 (506)
-+++|+..-... ....++++..+|| +|..+ .+|+-+|...+.+.++..++
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~ 64 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQK 64 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHH
Confidence 458888665331 1244778999995 99888 56899999999999988885
No 81
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=55.42 E-value=31 Score=22.34 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=31.6
Q ss_pred hHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhcc
Q 010612 57 HRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIHD 97 (506)
Q Consensus 57 ~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~~ 97 (506)
.+.++++..+||+|..+.+. |.-+|-..+++.+...+..+.
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 57788999999999887763 344677789999998887543
No 82
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=54.74 E-value=56 Score=23.41 Aligned_cols=57 Identities=32% Similarity=0.377 Sum_probs=41.6
Q ss_pred CCCCCCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec------CccEEEecCHHHHHHHHh
Q 010612 36 LPPGPCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 36 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------~~~~v~v~dp~~~~~i~~ 94 (506)
.||.|...=++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 34555555678887543 2356788999999999888762 345788889999888886
No 83
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=53.99 E-value=51 Score=23.38 Aligned_cols=50 Identities=10% Similarity=-0.015 Sum_probs=38.7
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|...+++.+...+..
T Consensus 18 l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCSS--CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 467877633 3367789999999999888764 5667888999999988874
No 84
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=53.91 E-value=37 Score=23.16 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=37.2
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec----CccEEEecCHHHHHHH
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG----SFPVVVGSSVEMAKLF 92 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----~~~~v~v~dp~~~~~i 92 (506)
|...=++|++..-. ..+.+++...+||+|..+.+. |.-+|-..+++.+..+
T Consensus 10 ~~~~l~V~~Lp~~~--te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 10 HGSKVFVGRCTEDM--TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp -CCEEEEESCCTTC--CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCCC--CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 33445778775432 357789999999999988875 4567888999988853
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=53.58 E-value=49 Score=23.91 Aligned_cols=49 Identities=10% Similarity=-0.001 Sum_probs=37.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|...+++.+...+.
T Consensus 19 l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~ 69 (115)
T 3beg_B 19 VVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVR 69 (115)
T ss_dssp EEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHH
Confidence 467887643 2356788999999999888765 566788899999988887
No 86
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=52.72 E-value=41 Score=21.71 Aligned_cols=50 Identities=16% Similarity=0.293 Sum_probs=34.5
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++||+..- -..+.++++..+||+|..+.+. |.-+|-..+++.++.++..+
T Consensus 3 ~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 61 (75)
T 2mss_A 3 FVGGLSVN--TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIH 61 (75)
T ss_dssp EEECCCSS--CCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSS
T ss_pred EEecCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCC
Confidence 34554332 2356788999999999887753 23467778999998887644
No 87
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=48.37 E-value=53 Score=23.13 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=38.8
Q ss_pred CceeecCcCCCCC----ChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSL----PHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~----~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..-... ..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3578888754322 347788999999999888875 4457777888888887764
No 88
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=47.69 E-value=57 Score=23.52 Aligned_cols=50 Identities=16% Similarity=0.214 Sum_probs=37.4
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 8 lfV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 467777543 2367799999999999877753 2357888999999988864
No 89
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=46.77 E-value=68 Score=22.08 Aligned_cols=51 Identities=16% Similarity=0.224 Sum_probs=36.2
Q ss_pred CCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 42 PWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 42 ~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
.|=++||+..-. ..+.++++..+||+|..+++. |.-+|-..+++.+....+
T Consensus 8 ~wL~VgNL~~~~--te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 8 SWLLLKNLTAQI--DGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp CEEEEECCCTTC--CCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred ceEEEeCCCccC--CHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 356788875442 357899999999999888764 344666778877666654
No 90
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=43.21 E-value=75 Score=22.11 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=35.7
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-----C----ccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-----S----FPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-----~----~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..-. ..+.++++..+||+|..+.+. + .-+|-..+++.+...+..
T Consensus 22 lfV~nLp~~~--te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQNM--TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTTC--CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 3677765432 357788999999999887753 1 236777899998888753
No 91
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.71 E-value=83 Score=21.63 Aligned_cols=55 Identities=9% Similarity=0.176 Sum_probs=39.6
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhccccc
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIHDANF 100 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~~~~~ 100 (506)
=++|++..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..+...+
T Consensus 13 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~ 76 (99)
T 2dgs_A 13 IFVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDI 76 (99)
T ss_dssp EEEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEE
Confidence 467776543 2357788999999999888763 234777899999999887544333
No 92
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=40.98 E-value=85 Score=21.93 Aligned_cols=50 Identities=14% Similarity=0.226 Sum_probs=36.6
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 26 l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 467776543 2357788999999999888763 3346777899999888863
No 93
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=40.80 E-value=57 Score=21.79 Aligned_cols=52 Identities=12% Similarity=0.234 Sum_probs=37.3
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
-=++||+..-. ..+.++++..+||+|..+.+. |.-+|-..+++.+...+...
T Consensus 13 ~l~V~nlp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 13 KMFVGGLSWDT--SKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEEECCCTTC--CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 34677775432 367788999999999887753 23467778899888888643
No 94
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.79 E-value=94 Score=21.95 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=37.8
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+..- -..+.++++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~~--~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 17 VVHVRGLCES--VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp EEEEESCCSS--CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4578887543 2367789999999999888764 345777889998888876
No 95
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=40.39 E-value=77 Score=22.10 Aligned_cols=51 Identities=22% Similarity=0.121 Sum_probs=37.3
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 17 ~l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 17 KLFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3567777543 2357788999999999887764 3446777899999888863
No 96
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=39.86 E-value=97 Score=21.84 Aligned_cols=49 Identities=12% Similarity=0.153 Sum_probs=36.8
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 29 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 29 LFVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 467776543 2357788999999999888763 345777889999988886
No 97
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=39.66 E-value=94 Score=22.62 Aligned_cols=55 Identities=13% Similarity=0.238 Sum_probs=39.5
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh-ccccc
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI-HDANF 100 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~-~~~~~ 100 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|...+++.+..++.. +...+
T Consensus 25 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 89 (126)
T 3ex7_B 25 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDL 89 (126)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCee
Confidence 467776533 2367788999999999888763 3457888999999988863 44333
No 98
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=39.58 E-value=85 Score=21.50 Aligned_cols=51 Identities=25% Similarity=0.228 Sum_probs=37.2
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec------------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG------------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 7 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3467776543 2367788999999998777653 2446777899999998874
No 99
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.04 E-value=95 Score=21.53 Aligned_cols=50 Identities=20% Similarity=0.097 Sum_probs=37.2
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~ 94 (506)
.=++|++..- -..+.++++..+||+|..+.+. +.-+|-..+++.+..++.
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 17 TLYVGNLSRD--VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc--CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 3567777543 2367788999999999887764 245777889999988886
No 100
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=38.97 E-value=92 Score=22.37 Aligned_cols=51 Identities=12% Similarity=-0.031 Sum_probs=38.4
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcC-CeeEEEec-----CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYG-PIMQLRFG-----SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~-----~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++||+..- -..+.++++.++|| .|..+.+. |.-+|-..+++.+...+..
T Consensus 30 ~l~VgnLp~~--~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPEG--CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSCC--CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 3567877543 33678999999999 78777763 5568888999999988864
No 101
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=38.34 E-value=33 Score=19.94 Aligned_cols=6 Identities=33% Similarity=-0.131 Sum_probs=2.2
Q ss_pred HHHhcc
Q 010612 24 FICGSR 29 (506)
Q Consensus 24 ~~~~~~ 29 (506)
++|.++
T Consensus 32 ~~~~RR 37 (44)
T 2jwa_A 32 GILIKR 37 (44)
T ss_dssp HHHHHH
T ss_pred Hhheeh
Confidence 333333
No 102
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=38.26 E-value=25 Score=16.71 Aligned_cols=12 Identities=33% Similarity=0.462 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHH
Q 010612 323 EIFDKATKELDR 334 (506)
Q Consensus 323 ~~q~~l~~Ei~~ 334 (506)
..|.++|.|+..
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578999999864
No 103
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=38.20 E-value=90 Score=21.00 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=36.2
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 11 l~V~nlp~~--~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 11 IFVRNLPFD--FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEECSCCTT--CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 457776532 3367788999999999877654 3346777899999888863
No 104
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=37.81 E-value=1.1e+02 Score=21.80 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=36.1
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+.. .-..+.++++..+||+|..+.+. +.-+|...+++.+...+..
T Consensus 14 ~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 14 LAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 5666643 23467789999999999888863 3457778899998888763
No 105
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.01 E-value=96 Score=20.99 Aligned_cols=54 Identities=26% Similarity=0.274 Sum_probs=38.4
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
|...=++||+..- -..+.++++.++||+|..+.+. +.-+|-..+++.+..++..
T Consensus 14 ~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 14 PNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp GGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3334577777543 2357788999999999887763 2346777899999888873
No 106
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.97 E-value=1.1e+02 Score=21.73 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=39.1
Q ss_pred CCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 41 CPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 41 ~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
...=++||+..- -..+.++++..+||.|..+.+. |.-+|-..+++.+...+.
T Consensus 16 ~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 16 SRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334577887543 2357789999999999888865 455788889998888876
No 107
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=36.87 E-value=1.1e+02 Score=21.86 Aligned_cols=51 Identities=20% Similarity=0.173 Sum_probs=37.9
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++||+..- -..+.++++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 8 ~lfV~nL~~~--~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLNDN--VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3467877543 2367789999999999888763 2347888999999988863
No 108
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=36.29 E-value=47 Score=24.68 Aligned_cols=52 Identities=19% Similarity=0.220 Sum_probs=35.7
Q ss_pred ceeecCcCCCCC--ChHHHHHHHhhcCCeeEEEec------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSL--PHRSIHSLSQKYGPIMQLRFG------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~--~~~~~~~~~~kyG~v~~~~~~------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..-... ..+.+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 467887643221 112356788999999888763 4567888999988888753
No 109
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=36.22 E-value=1e+02 Score=21.28 Aligned_cols=49 Identities=18% Similarity=0.199 Sum_probs=35.5
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec----CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG----SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 4 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 4 YVGNLGTG--AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp EEECCCSS--CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 45555432 2357788999999999877763 3457777999999988873
No 110
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=35.99 E-value=74 Score=23.13 Aligned_cols=50 Identities=8% Similarity=0.151 Sum_probs=35.7
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++||+..- -..+.+.++..+||+|..+.+. +.-+|...+.+.+...+..+
T Consensus 40 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~ 98 (124)
T 2jwn_A 40 YVGNVDYG--STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMD 98 (124)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcC
Confidence 56666432 2367788999999999877763 23477789999999888433
No 111
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.61 E-value=1.1e+02 Score=21.02 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=37.5
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++||+ .-..+.++++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 17 ~l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3578883 34467799999999999888875 3446777899999988854
No 112
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.44 E-value=1.2e+02 Score=21.42 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=37.4
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
=++|++..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 28 l~V~nl~~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 28 VYCGGIASG--LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEECCSSC--CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 467776543 2367788999999999888874 4557778999998888853
No 113
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=35.39 E-value=1.1e+02 Score=20.95 Aligned_cols=48 Identities=15% Similarity=0.327 Sum_probs=35.2
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++.
T Consensus 6 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 6 YLGSIPYD--QTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred EEECCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 56665432 2357788999999999888763 335677789999988885
No 114
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=35.26 E-value=1.3e+02 Score=22.11 Aligned_cols=52 Identities=25% Similarity=0.247 Sum_probs=37.9
Q ss_pred CCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 42 PWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 42 ~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
..=++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 47 ~~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 47 CCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp SCBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34567776543 2356788999999999888763 2346777899999988873
No 115
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.84 E-value=1.1e+02 Score=20.95 Aligned_cols=49 Identities=10% Similarity=0.097 Sum_probs=35.4
Q ss_pred ceeecCcCCCCCChHHHH----HHHhhcCCeeEEEec------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIH----SLSQKYGPIMQLRFG------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~----~~~~kyG~v~~~~~~------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..-. ..+.++ ++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 12 l~V~nL~~~~--~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 12 VQVSNIDYRL--SRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEEESCCTTS--CHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred EEEECCCCCC--CHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 4677775432 234455 899999999888874 345777789999888876
No 116
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=34.73 E-value=1e+02 Score=20.93 Aligned_cols=49 Identities=20% Similarity=0.269 Sum_probs=35.8
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 19 l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 19 VFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 467776543 2367788999999999887763 234677788888888886
No 117
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.40 E-value=1.1e+02 Score=20.93 Aligned_cols=49 Identities=22% Similarity=0.302 Sum_probs=36.2
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 11 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 68 (99)
T 1whw_A 11 LFVRNLSYT--SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA 68 (99)
T ss_dssp EEEECCCTT--CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 356666433 2356788999999999888763 335777899999998885
No 118
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=34.18 E-value=1.1e+02 Score=24.00 Aligned_cols=49 Identities=14% Similarity=0.124 Sum_probs=36.3
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec-----CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-----SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-----~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+.. .-..+.++++..+||.|..+.+. +.-+|-..|++.+......
T Consensus 50 ~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 4777743 33467799999999999888763 2457788899888877763
No 119
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.88 E-value=83 Score=22.43 Aligned_cols=50 Identities=12% Similarity=0.154 Sum_probs=35.4
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++||+..- -..+.+.++..+||.|..+.+. +.-+|-..+++.+..++..+
T Consensus 29 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~ 87 (114)
T 2cq4_A 29 FCMQLAAR--IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLT 87 (114)
T ss_dssp EEESCCTT--CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHT
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcC
Confidence 57766433 2356788999999999888774 23467778888888777433
No 120
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=33.84 E-value=1.1e+02 Score=22.76 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=36.2
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC-----ccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS-----FPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~-----~~~v~v~dp~~~~~i~~ 94 (506)
=++||+.. .-..+.++++..+||.|..+.+.. +-+|...+++.+.....
T Consensus 31 I~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 31 IIVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EEECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 45888852 234677999999999998887642 35788888888887765
No 121
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=33.72 E-value=1.1e+02 Score=21.99 Aligned_cols=50 Identities=24% Similarity=0.218 Sum_probs=36.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 10 l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 10 LFIGGLNRE--TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEECCTTT--CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 356766443 3367788999999999877764 3457778999999988864
No 122
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=33.59 E-value=1e+02 Score=20.26 Aligned_cols=50 Identities=18% Similarity=0.226 Sum_probs=36.5
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 9 ~l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 9 VLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp EEEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 3467777543 2357788999999999888762 234777889999888885
No 123
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=33.57 E-value=1.1e+02 Score=20.81 Aligned_cols=51 Identities=22% Similarity=0.361 Sum_probs=37.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~~ 95 (506)
=++|++..- .-..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 13 l~V~nlp~~-~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 13 LFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEESSTTS-CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 467777541 22357788999999999888764 4557788999999998874
No 124
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.33 E-value=94 Score=21.32 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=36.4
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCee-EEEec---------CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIM-QLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~-~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
-=++||+..- -..+.++++..+||+|. .+.+. +.-+|-..+++.+...+.
T Consensus 11 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 70 (99)
T 2div_A 11 SLWMGDLEPY--MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 70 (99)
T ss_dssp EEEECSCCTT--CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHH
Confidence 3467777543 23677889999999988 77653 234677789999998886
No 125
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=32.77 E-value=1.2e+02 Score=20.96 Aligned_cols=51 Identities=8% Similarity=0.078 Sum_probs=38.3
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 13 ~l~V~nl~~~--~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANT--VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 3467777543 2357788999999999888864 4557778899999988873
No 126
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=32.64 E-value=1.3e+02 Score=21.03 Aligned_cols=50 Identities=16% Similarity=0.144 Sum_probs=36.0
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 32 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 32 LLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 467776433 2356788999999999877654 2346777899999888873
No 127
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=32.52 E-value=1.2e+02 Score=20.65 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=36.3
Q ss_pred ceeecCcCCCCCChHHHH----HHHhhcCCeeEEEec------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIH----SLSQKYGPIMQLRFG------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~----~~~~kyG~v~~~~~~------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..-. ..+.++ ++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 11 l~V~nLp~~~--~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 11 IYINNLNEKI--KKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEESCCTTS--CHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC--CHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 4677765432 244455 889999999888764 5567888999999888863
No 128
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.78 E-value=1.1e+02 Score=20.13 Aligned_cols=50 Identities=20% Similarity=0.128 Sum_probs=35.2
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3467776433 2356688888999999887753 234677788888888776
No 129
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.34 E-value=1e+02 Score=21.57 Aligned_cols=39 Identities=28% Similarity=0.370 Sum_probs=32.0
Q ss_pred hHHHHHHHhhcCCeeEEEec----CccEEEecCHHHHHHHHhh
Q 010612 57 HRSIHSLSQKYGPIMQLRFG----SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 57 ~~~~~~~~~kyG~v~~~~~~----~~~~v~v~dp~~~~~i~~~ 95 (506)
.+.++++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 57799999999999888874 3457778899999888875
No 130
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=31.00 E-value=1.4e+02 Score=21.13 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=37.2
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++|++..- -..+.++++..+||+|..+.+. +.-+|...+++.+..++..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 17 HVFVGDLSPE--ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3467776543 2357788999999999887763 2346777899999998863
No 131
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=30.91 E-value=1.4e+02 Score=21.12 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=36.5
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 34 l~V~nLp~~--~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 34 LFVRPFPLD--VQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EEECSSCTT--CCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 356666432 2356788999999999877764 5557777899999888863
No 132
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=30.86 E-value=1.2e+02 Score=21.65 Aligned_cols=51 Identities=12% Similarity=0.043 Sum_probs=36.8
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..-. ..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 27 ~l~V~nLp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 27 NLFIYHLPQEF--GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp CEEEESCCSSC--CHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 34677775432 357788999999998777653 1346777899999988854
No 133
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.60 E-value=80 Score=21.12 Aligned_cols=46 Identities=15% Similarity=0.318 Sum_probs=34.1
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec----CccEEEecCHHHHHHH
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG----SFPVVVGSSVEMAKLF 92 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----~~~~v~v~dp~~~~~i 92 (506)
++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.++.+
T Consensus 9 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 9 FVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 56766433 2357788999999999888874 4567888999988754
No 134
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=30.42 E-value=1.2e+02 Score=20.15 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=33.8
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..+
T Consensus 10 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 68 (89)
T 3ucg_A 10 YVGNVDYG--ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 68 (89)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGT
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcC
Confidence 45555332 2357788999999999877653 13467778888888877433
No 135
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=30.17 E-value=1.1e+02 Score=22.31 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=36.8
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++||+ .-..+.++++..+||+|..+.++ +.-+|...+++.+...+..
T Consensus 41 ~lfVgnl----~~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 41 TLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEEECS----SCCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEEcCC----CCCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3578883 24467789999999999887765 4457777899988888853
No 136
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=29.96 E-value=1.4e+02 Score=23.19 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=37.1
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 75 l~V~nLp~~--~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 467776543 3467789999999999887763 3457777899999888863
No 137
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=29.67 E-value=1.2e+02 Score=19.79 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=34.3
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 5 ~V~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 5 FVGDLNVN--VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EEECCCTT--CCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 35555332 2356788899999999877653 2347778899999888863
No 138
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=29.65 E-value=82 Score=22.14 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=31.8
Q ss_pred hHHHHHHHhhcCCeeEEEecCcc-EEEecCHHHHHHHHh
Q 010612 57 HRSIHSLSQKYGPIMQLRFGSFP-VVVGSSVEMAKLFLK 94 (506)
Q Consensus 57 ~~~~~~~~~kyG~v~~~~~~~~~-~v~v~dp~~~~~i~~ 94 (506)
..-+.++.+.||.|.--|+.... ++++.+|+.+++++.
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 56688999999988777887654 778899999999987
No 139
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.22 E-value=1.5e+02 Score=20.99 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=38.0
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC---------ccEEEecCHHHHHHHHhhc
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS---------FPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~v~v~dp~~~~~i~~~~ 96 (506)
=++||+..- -..+.++++..+||+|..+.+.. .-+|-..+++.+..++..-
T Consensus 20 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 20 IFVGGLPYH--TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp EEEECCCSS--CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 467777543 23677889999999998887643 3477789999999988753
No 140
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=29.16 E-value=1.4e+02 Score=20.48 Aligned_cols=51 Identities=22% Similarity=0.361 Sum_probs=37.2
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- .-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 25 l~V~nLp~~-~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 25 LFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEEESCCSS-CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 367777530 12356788999999999888764 4557777899999888873
No 141
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.99 E-value=1.7e+02 Score=21.35 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=38.2
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+..- -..+.++++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 33 ~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4578887653 2357789999999999888765 456778889998888876
No 142
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.92 E-value=1e+02 Score=21.98 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=36.7
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++||+..- -..+.++++..+||+|..+.+. +.-+|...+++.+..++..+
T Consensus 31 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~ 89 (116)
T 1x4b_A 31 FIGGLSFE--TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAAR 89 (116)
T ss_dssp EEECCTTC--CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSC
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhC
Confidence 67776433 2357788999999999777763 24467778999999988753
No 143
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=28.87 E-value=1.5e+02 Score=20.84 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=38.1
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
-=++||+..- -..+.+.++..+||+|..+.+. |.-+|...+++.+...+...
T Consensus 27 ~lfV~nLp~~--~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 27 KMFIGGLSWQ--TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 3467776432 2357788999999999888763 23578889999999988743
No 144
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.83 E-value=1.2e+02 Score=20.95 Aligned_cols=49 Identities=14% Similarity=0.287 Sum_probs=35.0
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 12 ~V~nlp~~--~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 12 FVGNIPYE--ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEESCCTT--SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEeCCCCc--CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 56665432 2356788999999998777653 3346777899999988863
No 145
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.82 E-value=96 Score=21.94 Aligned_cols=49 Identities=12% Similarity=0.181 Sum_probs=35.0
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~ 94 (506)
=++|++..- -..+.++++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 32 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 32 LHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp EEEESCCTT--CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred EEEECCCCc--CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 457766433 2367788999999999877763 344677788888887776
No 146
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.57 E-value=96 Score=21.61 Aligned_cols=54 Identities=15% Similarity=0.205 Sum_probs=37.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC---------ccEEEecCHHHHHHHHhhcccc
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS---------FPVVVGSSVEMAKLFLKIHDAN 99 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~v~v~dp~~~~~i~~~~~~~ 99 (506)
=++||+..- -..+.++++..+||+|..+.+.. .-+|-..+++.+..++..+...
T Consensus 19 l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~ 81 (105)
T 2dh8_A 19 LFVGGLDWS--TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT 81 (105)
T ss_dssp ECCBSCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCe
Confidence 456666433 23577889999999998776532 3467778999999888764333
No 147
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.36 E-value=92 Score=21.42 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=36.8
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++|++..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 17 RLFVGNLPPD--ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp EEEEESCCTT--CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 3467777543 2367788999999999888765 3446667888888887753
No 148
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.20 E-value=69 Score=22.82 Aligned_cols=51 Identities=14% Similarity=0.051 Sum_probs=36.2
Q ss_pred CceeecCcCCCCCChHHHH---HHHhhcCCeeEEEec------------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIH---SLSQKYGPIMQLRFG------------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~---~~~~kyG~v~~~~~~------------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..-.. .+.+. ++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 17 ~l~V~nLp~~~~--~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 17 LVFVVGLSQRLA--DPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp CEEEEEECTTTC--CHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCCC--HHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 447787754322 45566 788999999887764 2446777899999888875
No 149
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=28.06 E-value=1.5e+02 Score=20.38 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=35.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||.|..+.+. +.-+|...+.+.+...+..
T Consensus 30 l~V~nlp~~--~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 82 (101)
T 2la4_A 30 AYIGNIPHF--ATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 82 (101)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEcCCCcc--cCHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 357776542 2367788999999999888764 3446677888888887753
No 150
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=27.91 E-value=1.6e+02 Score=23.89 Aligned_cols=50 Identities=10% Similarity=0.119 Sum_probs=38.0
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec----CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG----SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+... .-..+.+.++..+||+|..+.+. |.-+|...+++.+...+.
T Consensus 7 l~V~nL~~~-~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 7 LMVYGLDQS-KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEECCCTT-TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 468887622 22356788999999999998874 456888899999988875
No 151
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=27.80 E-value=1.5e+02 Score=20.85 Aligned_cols=55 Identities=15% Similarity=0.003 Sum_probs=35.2
Q ss_pred CCCCceeecCcC---CCCCChHHHHHHHhhcCCeeEEEec----------CccEEEecCHHHHHHHHh
Q 010612 40 PCPWPIIGNLNL---MGSLPHRSIHSLSQKYGPIMQLRFG----------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 40 p~~~p~~G~~~~---~~~~~~~~~~~~~~kyG~v~~~~~~----------~~~~v~v~dp~~~~~i~~ 94 (506)
|...=+++|+.. +..+..+.+++...+||.|..+.+. |.-+|-..+++.+.....
T Consensus 7 ~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~ 74 (105)
T 2pe8_A 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVV 74 (105)
T ss_dssp CCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHH
Confidence 444556777753 2234467788888999999887753 123566678887777665
No 152
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.76 E-value=1.6e+02 Score=20.78 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=36.7
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+..- -..+.++++..+||+|..+.+. +.-+|...+++.+...+.
T Consensus 17 ~l~V~nlp~~--~~~~~l~~~f~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 74 (114)
T 2do0_A 17 TVFVANLDYK--VGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIS 74 (114)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHH
Confidence 3567777543 2367788999999999877653 234677789999988886
No 153
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.72 E-value=1.6e+02 Score=20.58 Aligned_cols=50 Identities=18% Similarity=0.128 Sum_probs=36.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCC-eeEEEec----------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGP-IMQLRFG----------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~-v~~~~~~----------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||+ |..+.+. +.-+|-..+++.+...+..
T Consensus 11 l~V~nLp~~--~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 11 LFIGGIPKM--KKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEECCCTT--SCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCCc--CCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 367776532 336778899999998 8887764 3447777899999988874
No 154
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=27.67 E-value=1.5e+02 Score=21.88 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=36.1
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 45 l~V~nLp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 45 LMVNYIPTT--VDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp EEEESCSTT--CCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 356766432 2356788999999999887763 2346778999999988874
No 155
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.59 E-value=1.5e+02 Score=20.40 Aligned_cols=54 Identities=19% Similarity=0.106 Sum_probs=39.0
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhh
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~ 95 (506)
+..-=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 3445578877543 2357788899999999887764 2346778999999988873
No 156
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.40 E-value=1.6e+02 Score=20.65 Aligned_cols=54 Identities=11% Similarity=-0.023 Sum_probs=39.5
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
|...=++||+..- .-..+.++++..+||.|..+.+. +.-+|-..+++.+.....
T Consensus 14 p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 14 TRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4444678888651 12356688899999999988875 345788889999888876
No 157
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.97 E-value=1.5e+02 Score=19.96 Aligned_cols=50 Identities=16% Similarity=0.267 Sum_probs=37.1
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC-ccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS-FPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~-~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 13 l~V~nLp~~--~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 13 LHVGNISPT--CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 467777543 23677889999999998887653 456777889998888853
No 158
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.94 E-value=1.6e+02 Score=20.33 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=37.2
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 17 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (103)
T 2cqg_A 17 DLIVLGLPWK--TTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 76 (103)
T ss_dssp CEEEESCCSS--CCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS
T ss_pred EEEEEcCCCc--CCHHHHHHHHHhcCCeEEEEEEecCCCCCccceEEEEECCHHHHHHHHHc
Confidence 3467876433 2367788999999999877653 1346777899999998873
No 159
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.14 E-value=1.6e+02 Score=20.19 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=37.1
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC---------ccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS---------FPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..- -..+.+.++..+||+|..+.+.. .-+|-..+++.+..++..
T Consensus 14 ~l~v~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 1x5s_A 14 KLFVGGLSFD--TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73 (102)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3567777533 33677889999999998887642 346777899999988853
No 160
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=25.80 E-value=1.7e+02 Score=22.43 Aligned_cols=49 Identities=16% Similarity=0.390 Sum_probs=35.0
Q ss_pred eeecCcCCCCCChHHHHHHHhhcC--CeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYG--PIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG--~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.++++..+|| .|..+.+. |.-+|-..+++.+...+..
T Consensus 59 fVgnLp~~--~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 59 YVGSFSWW--TTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp EEECCCTT--CCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45554332 23577889999999 88877762 2357888999999998875
No 161
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=25.42 E-value=1.2e+02 Score=21.72 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=34.9
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 44 ~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 44 FIYHLPQE--FTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp EEECSCTT--CCHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 56666433 2357788999999999888764 2346677888888888763
No 162
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.32 E-value=1.6e+02 Score=21.15 Aligned_cols=54 Identities=17% Similarity=0.118 Sum_probs=39.3
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
|...=++||+..- +-..+.++++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 24 p~~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 24 LGRVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CCCEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 3344678887653 12356788999999999888875 345777889998888776
No 163
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=25.27 E-value=1.8e+02 Score=20.44 Aligned_cols=49 Identities=18% Similarity=0.325 Sum_probs=36.5
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
=++|++..- -..+.+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 29 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 29 LYVGSLHFN--ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEECCCSS--CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 467777543 3467788999999999877653 245777899999998886
No 164
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=25.08 E-value=1.5e+02 Score=19.48 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=35.9
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 9 l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSPE--ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 356766433 3367788999999999887763 2346777899999888873
No 165
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=25.05 E-value=1.6e+02 Score=20.69 Aligned_cols=37 Identities=16% Similarity=0.141 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCeeEEEec-----------CccEEEecCHHHHHHHHh
Q 010612 58 RSIHSLSQKYGPIMQLRFG-----------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 58 ~~~~~~~~kyG~v~~~~~~-----------~~~~v~v~dp~~~~~i~~ 94 (506)
+-+++...+||+|..+.+. |.-+|-..+++.+.....
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~ 77 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQ 77 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHH
Confidence 4566777899999988864 223566688888777664
No 166
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.04 E-value=1.6e+02 Score=19.67 Aligned_cols=49 Identities=22% Similarity=0.292 Sum_probs=36.7
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 11 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 11 LFIGNLPRE--ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 467776543 2357788999999999888764 445777899999988885
No 167
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=24.83 E-value=1.6e+02 Score=20.26 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=35.6
Q ss_pred ceeecCcCCC----CCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMG----SLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~----~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+.... ....+.++++..+||+|..+.+. |.-+|...+++.+...+.
T Consensus 9 vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 9 IVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp EEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 3566665431 11235678889999999888764 345788889999988885
No 168
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.51 E-value=1.4e+02 Score=18.99 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=32.6
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++||+..- -..+.++++..+||+|..+.+. |.-+|-..+++.+...+...
T Consensus 4 ~v~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 4 FIGGLSWQ--TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp EEESCCSS--CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 45555432 2356688899999998776653 22355567888888777644
No 169
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.26 E-value=1.1e+02 Score=21.17 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=36.8
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC---------ccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS---------FPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..- -..+.+.++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 17 TIRVTNLSED--TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3467777543 23567888889999998877632 346778899999988873
No 170
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.23 E-value=1.8e+02 Score=20.03 Aligned_cols=51 Identities=12% Similarity=0.150 Sum_probs=37.8
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec-------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG-------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~v~v~dp~~~~~i~~~ 95 (506)
-=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 17 RLHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 4567777543 2357788999999999888764 3457777899999988863
No 171
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=23.16 E-value=2.2e+02 Score=21.62 Aligned_cols=51 Identities=25% Similarity=0.244 Sum_probs=37.9
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++||+..- -..+.+.++..+||+|..+.+. +.-+|...+++.+..++..
T Consensus 41 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 100 (156)
T 1h2v_Z 41 TLYVGNLSFY--TTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 (156)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4567777533 2367789999999999888762 2347778999999998874
No 172
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=22.99 E-value=2.9e+02 Score=22.07 Aligned_cols=49 Identities=24% Similarity=0.371 Sum_probs=36.5
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 32 ~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 32 YVGSIYYE--LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 56666443 2367788999999999888763 3457888999999998873
No 173
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.99 E-value=1.7e+02 Score=19.77 Aligned_cols=49 Identities=16% Similarity=0.287 Sum_probs=35.4
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEE-Eec---------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQL-RFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~-~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.+.++..+||+|..+ .+. +.-+|-..+++.+...+.
T Consensus 8 l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 66 (96)
T 1x5t_A 8 IFIGNLDPE--IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 66 (96)
T ss_dssp EEEECCCTT--CCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 356766543 2367788999999998666 542 244777899999999887
No 174
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.92 E-value=2.3e+02 Score=20.81 Aligned_cols=48 Identities=15% Similarity=0.030 Sum_probs=34.4
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec---C-ccEEEecCHHHHHHHHh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---S-FPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~-~~~v~v~dp~~~~~i~~ 94 (506)
++||+.. .-..+.+.++..+||.|..+.+. | .-+|-..|++.+.....
T Consensus 29 ~V~NL~~--~vt~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~~~A~~A~~ 80 (124)
T 2e5i_A 29 SIQNPLY--PITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKA 80 (124)
T ss_dssp EEESCCS--CCCHHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSHHHHHHHHH
T ss_pred EEcCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3677653 23367899999999999777653 3 36777888887776665
No 175
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=22.73 E-value=1.7e+02 Score=19.23 Aligned_cols=49 Identities=22% Similarity=0.254 Sum_probs=35.1
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec----------CccEEEecCHHHHHHHHhh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG----------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----------~~~~v~v~dp~~~~~i~~~ 95 (506)
++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 8 ~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 8 HIGRLTRN--VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp EEECCCTT--CCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 56665432 2356788899999999877652 3447778899999988873
No 176
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.55 E-value=1.9e+02 Score=19.83 Aligned_cols=49 Identities=18% Similarity=0.137 Sum_probs=36.8
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+++.+..++.
T Consensus 16 l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2dnm_A 16 LKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73 (103)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHH
Confidence 467777543 2367788999999999888764 345777888888888887
No 177
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.38 E-value=2.2e+02 Score=20.51 Aligned_cols=51 Identities=14% Similarity=0.137 Sum_probs=36.6
Q ss_pred Ccee--ecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHhh
Q 010612 43 WPII--GNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~--G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~~ 95 (506)
.=++ |++..- -..+.+++...+||.|..+.+. +.-+|-..+++.+.+.+..
T Consensus 27 ~L~V~Ng~L~~~--~te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 27 SLVVANGGLGNG--VSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp EEEEETCTGGGT--CCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCCC--CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4567 555332 2357899999999999888764 2457777899988888763
No 178
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=22.01 E-value=1.5e+02 Score=27.64 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=37.6
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
.=+|||+..-. ....|.++..+||+|..+.+. |.-+|...+++.+..++..
T Consensus 104 ~lfV~nL~~~~--te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNYDT--TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCCCC--CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 45777775432 357788999999999888763 3457888899999888854
No 179
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=21.91 E-value=1.7e+02 Score=23.51 Aligned_cols=50 Identities=20% Similarity=0.222 Sum_probs=37.0
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHhhc
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~~ 96 (506)
++|++..- -..+.++++..+||+|..+.+. |.-+|-..+++.+...+...
T Consensus 113 ~V~nLp~~--~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 113 YIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp EEECCCTT--CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred EecCCCCc--CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 56776532 3467899999999998877653 34577778999999988643
No 180
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.86 E-value=2e+02 Score=19.76 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=38.9
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhh-cCCeeEEEec--------CccEEEecCHHHHHHHHhh
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQK-YGPIMQLRFG--------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~k-yG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~ 95 (506)
|..-=++||+..- -..+.+.++..+ ||+|..+.+. +.-+|-..+++.+...+..
T Consensus 8 ~~~~l~V~nLp~~--~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 8 PEYSLFVGDLTPD--VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp CCCCEEEECCCTT--CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 3344578887543 236778889998 9999887763 2346778899999988874
No 181
>2kt5_A RNA and export factor-binding protein 2; chaperone, mRNA processing, mRNA splicing, transport, nucleus, RNA-binding, spliceosome, transport; NMR {Mus musculus}
Probab=21.73 E-value=2.3e+02 Score=20.38 Aligned_cols=49 Identities=16% Similarity=0.168 Sum_probs=35.7
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHh
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~ 94 (506)
=++||+..- -..+.++++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 38 l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 94 (124)
T 2kt5_A 38 LLVSNLDFG--VSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMK 94 (124)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTTSCCSEEEEECCSSSSCCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCEeeEEEEEECCHHHHHHHHH
Confidence 356766432 2357788999999999877763 345777789999988886
No 182
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.63 E-value=1.9e+02 Score=19.41 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=36.9
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEecC---------ccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFGS---------FPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+..- -..+.++++..+||+|..+.+.. .-+|-..+++.+..++.
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (95)
T 2dnz_A 7 GLYVGSLHFN--ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 65 (95)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 3467776543 23677889999999998877632 34677789999998887
No 183
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=21.01 E-value=2.4e+02 Score=22.13 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=31.0
Q ss_pred hHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHhh
Q 010612 57 HRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 57 ~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~~ 95 (506)
.+.+.++..+||+|..+.+. +.-+|...+++.+...+..
T Consensus 102 e~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~ 148 (177)
T 2f3j_A 102 DADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQ 148 (177)
T ss_dssp HHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHH
Confidence 56788999999999888763 3457778899999988873
No 184
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=21.00 E-value=2.1e+02 Score=22.49 Aligned_cols=51 Identities=20% Similarity=0.269 Sum_probs=38.2
Q ss_pred ceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhhc
Q 010612 44 PIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKIH 96 (506)
Q Consensus 44 p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~~ 96 (506)
=++||+..- -..+.++++..+||+|..+.+. |.-+|...+++.+...+..+
T Consensus 16 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~ 75 (196)
T 1l3k_A 16 LFIGGLSFE--TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 (196)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcC
Confidence 467777543 2367788999999999777653 24578889999999998754
No 185
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=20.73 E-value=2.2e+02 Score=23.11 Aligned_cols=54 Identities=19% Similarity=0.200 Sum_probs=38.8
Q ss_pred CCCCceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---------CccEEEecCHHHHHHHHhh
Q 010612 40 PCPWPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---------SFPVVVGSSVEMAKLFLKI 95 (506)
Q Consensus 40 p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~v~v~dp~~~~~i~~~ 95 (506)
|..-=++||+..- -..+.+.++.++||+|..+.+. |.-+|-..+++.+...+..
T Consensus 14 p~~tlfVgnLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 14 PMASLYVGDLHPD--VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp -CCEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3333578887543 2367789999999999887753 2347888999999988864
No 186
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=20.36 E-value=2.1e+02 Score=21.65 Aligned_cols=48 Identities=21% Similarity=0.320 Sum_probs=34.6
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~ 94 (506)
++||+..- -..+.+.++.++||+|..+.+. +.-+|-..+++.+...+.
T Consensus 4 ~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 4 YVGNLDKA--ITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp EEEEEETT--CCHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred EECCCCCc--CCHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 35555422 2356788999999999888763 345777889999998884
No 187
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=20.28 E-value=89 Score=21.63 Aligned_cols=48 Identities=13% Similarity=0.295 Sum_probs=34.1
Q ss_pred eeecCcCCCCCChHHHHHHHhhcCCeeEEEec--------CccEEEecCHHHHHHHHh
Q 010612 45 IIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG--------SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 45 ~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~v~v~dp~~~~~i~~ 94 (506)
++|++..- -..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 13 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 13 FVGGIDVR--MDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 56666432 2367788999999999887763 334666778888888776
No 188
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.00 E-value=2.3e+02 Score=19.72 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=38.0
Q ss_pred CceeecCcCCCCCChHHHHHHHhhcCCeeEEEec---CccEEEecCHHHHHHHHh
Q 010612 43 WPIIGNLNLMGSLPHRSIHSLSQKYGPIMQLRFG---SFPVVVGSSVEMAKLFLK 94 (506)
Q Consensus 43 ~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~v~v~dp~~~~~i~~ 94 (506)
.=++||+.. .-..+.++++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 467888864 23367788999999999888764 445788889998888776
Done!