Query 010613
Match_columns 506
No_of_seqs 267 out of 2761
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:33:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010613.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010613hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icj_A Uncharacterized metal-d 100.0 2.8E-70 9.5E-75 588.2 28.2 406 46-496 37-447 (534)
2 3h4u_A Amidohydrolase; signatu 99.9 3.5E-26 1.2E-30 242.6 27.6 309 43-499 27-365 (479)
3 3gnh_A L-lysine, L-arginine ca 99.9 1.7E-26 5.9E-31 238.9 24.0 284 45-483 2-322 (403)
4 3lnp_A Amidohydrolase family p 99.9 8.7E-26 3E-30 238.8 26.3 306 38-497 16-350 (468)
5 2paj_A Putative cytosine/guani 99.9 2.8E-26 9.5E-31 244.2 22.0 312 44-499 9-354 (492)
6 3ls9_A Triazine hydrolase; atr 99.9 3.7E-26 1.3E-30 240.5 22.5 314 47-500 2-344 (456)
7 4f0r_A 5-methylthioadenosine/S 99.9 1.5E-26 5E-31 243.2 19.4 303 43-498 4-324 (447)
8 4dyk_A Amidohydrolase; adenosi 99.9 1.4E-25 4.8E-30 236.0 21.1 303 43-498 6-326 (451)
9 2r8c_A Putative amidohydrolase 99.9 3.3E-25 1.1E-29 231.6 22.6 280 44-483 3-330 (426)
10 3feq_A Putative amidohydrolase 99.9 1.6E-25 5.5E-30 233.1 20.1 280 44-483 3-327 (423)
11 4dzh_A Amidohydrolase; adenosi 99.9 2.1E-25 7.2E-30 236.6 19.2 304 42-497 11-332 (472)
12 4aql_A Guanine deaminase; hydr 99.9 2.5E-24 8.5E-29 228.8 24.8 306 44-499 30-369 (476)
13 2qs8_A XAA-Pro dipeptidase; am 99.9 5.1E-24 1.7E-28 222.0 23.5 295 43-499 5-345 (418)
14 1ra0_A Cytosine deaminase; alp 99.9 3.6E-24 1.2E-28 224.1 20.8 315 44-497 7-337 (430)
15 2puz_A Imidazolonepropionase; 99.9 1.4E-23 4.7E-28 218.7 23.9 306 44-482 14-332 (419)
16 2bb0_A Imidazolonepropionase; 99.9 2.7E-24 9.2E-29 224.3 18.1 302 45-482 5-327 (421)
17 2p9b_A Possible prolidase; pro 99.9 1.7E-23 6E-28 220.7 22.3 299 43-481 11-347 (458)
18 3v7p_A Amidohydrolase family p 99.9 5.6E-23 1.9E-27 215.3 23.2 293 47-498 2-323 (427)
19 2i9u_A Cytosine/guanine deamin 99.9 6.5E-23 2.2E-27 215.1 23.1 306 41-499 5-337 (439)
20 2q09_A Imidazolonepropionase; 99.9 3.6E-23 1.2E-27 215.5 20.1 303 45-482 5-320 (416)
21 3mdu_A N-formimino-L-glutamate 99.9 2.5E-23 8.5E-28 219.6 18.2 301 49-499 4-335 (453)
22 2qt3_A N-isopropylammelide iso 99.9 6.9E-22 2.4E-26 204.5 27.9 292 44-482 4-306 (403)
23 3be7_A Zn-dependent arginine c 99.9 7.1E-22 2.4E-26 204.9 27.2 293 44-498 5-333 (408)
24 2ood_A BLR3880 protein; PSI-II 99.9 1.6E-22 5.6E-27 214.6 21.5 302 46-499 4-343 (475)
25 2imr_A Hypothetical protein DR 99.9 3.8E-22 1.3E-26 208.3 19.3 296 43-498 35-371 (420)
26 4f0l_A Amidohydrolase; ssgcid, 99.9 1E-21 3.4E-26 207.2 21.8 120 361-499 219-344 (458)
27 1p1m_A Hypothetical protein TM 99.9 2.2E-22 7.5E-27 208.8 11.4 280 47-497 1-295 (406)
28 3hpa_A Amidohydrolase; signatu 99.8 7.2E-19 2.4E-23 184.3 28.3 301 41-483 25-351 (479)
29 3ooq_A Amidohydrolase; structu 99.8 2.1E-19 7.1E-24 186.0 10.5 96 372-482 213-309 (396)
30 2z00_A Dihydroorotase; zinc bi 99.8 3.4E-17 1.2E-21 170.4 23.6 116 362-481 151-308 (426)
31 4ac7_C Urease subunit alpha; h 99.7 1.6E-17 5.3E-22 177.6 14.9 267 42-484 64-368 (570)
32 4ubp_C Protein (urease (chain 99.7 1.6E-17 5.3E-22 177.6 14.8 267 42-484 64-368 (570)
33 1gkr_A Hydantoinase, non-ATP d 99.7 1.1E-16 3.9E-21 168.0 19.5 63 45-113 2-64 (458)
34 3sfw_A Dihydropyrimidinase; hy 99.7 5.5E-16 1.9E-20 163.7 24.1 62 45-113 1-62 (461)
35 1e9y_B Urease subunit beta; hy 99.7 1.8E-16 6.1E-21 171.1 20.2 70 42-113 63-140 (569)
36 1xrt_A Dihydroorotase, dhoase; 99.7 6.4E-17 2.2E-21 171.0 16.0 67 42-113 44-110 (467)
37 2vun_A Enamidase; nicotinate d 99.7 1.5E-15 5E-20 156.0 23.9 94 363-481 171-278 (386)
38 2ogj_A Dihydroorotase; TIM bar 99.7 1.4E-16 4.6E-21 165.9 15.2 94 363-481 186-293 (417)
39 3e74_A Allantoinase; (beta/alp 99.7 2.8E-15 9.7E-20 158.8 24.7 63 44-114 22-84 (473)
40 2fty_A Dihydropyrimidinase; al 99.7 9.6E-16 3.3E-20 165.6 21.0 65 44-114 2-66 (559)
41 3hm7_A Allantoinase; metallo-d 99.7 1.8E-15 6.1E-20 159.0 21.3 65 44-113 5-69 (448)
42 1gkp_A Hydantoinase; hydrolase 99.7 9.2E-16 3.1E-20 161.2 17.3 61 47-113 2-62 (458)
43 1yrr_A N-acetylglucosamine-6-p 99.7 1.3E-15 4.3E-20 156.7 16.0 62 47-113 2-63 (382)
44 2ics_A Adenine deaminase; TIM 99.6 1.8E-15 6.1E-20 154.8 17.0 95 363-482 165-275 (379)
45 3mpg_A Dihydroorotase, dhoase; 99.6 6.9E-15 2.3E-19 153.6 20.6 63 45-113 1-63 (428)
46 1nfg_A D-hydantoinase; TIM bar 99.6 1.3E-15 4.5E-20 160.1 14.7 61 45-113 1-61 (457)
47 2vm8_A Dihydropyrimidinase-rel 99.6 1.3E-14 4.5E-19 154.5 21.7 65 44-114 25-89 (501)
48 3dc8_A Dihydropyrimidinase; TI 99.6 2.7E-14 9.2E-19 151.9 22.3 61 45-114 1-61 (490)
49 2gwn_A Dihydroorotase; zinc-bi 99.6 4.3E-15 1.5E-19 156.4 15.3 67 44-113 3-70 (452)
50 3gri_A Dihydroorotase, dhoase; 99.6 7.8E-14 2.7E-18 145.6 19.8 61 47-113 2-62 (424)
51 3ggm_A Uncharacterized protein 99.5 3.1E-14 1E-18 113.3 9.4 74 44-118 3-76 (81)
52 2ftw_A Dihydropyrimidine amido 99.5 1.1E-12 3.8E-17 140.5 22.5 64 44-113 7-70 (521)
53 1rk6_A D-aminoacylase; TIM bar 99.5 8.7E-13 3E-17 140.4 19.1 68 43-115 19-86 (496)
54 3nqb_A Adenine deaminase 2; PS 99.5 2.6E-13 8.8E-18 147.7 14.3 72 38-113 28-99 (608)
55 2vhl_A N-acetylglucosamine-6-p 99.5 2.5E-12 8.7E-17 132.5 20.7 64 45-113 3-67 (396)
56 3mtw_A L-arginine carboxypepti 99.4 2.1E-12 7E-17 129.3 17.4 67 47-116 4-71 (403)
57 3gip_A N-acyl-D-glutamate deac 99.4 1.3E-11 4.4E-16 130.9 21.8 68 42-114 4-71 (480)
58 2vr2_A Dihydropyrimidinase; hy 99.4 1.1E-11 3.9E-16 133.3 20.7 68 44-113 26-93 (541)
59 3mkv_A Putative amidohydrolase 99.3 2E-12 7E-17 129.9 6.7 70 44-117 3-73 (426)
60 4ep8_C Urease subunit alpha; a 99.2 1.2E-11 4E-16 133.9 6.3 79 37-117 57-141 (566)
61 2pgf_A Adenosine deaminase; me 99.2 1.2E-10 4.1E-15 119.2 13.3 215 240-500 108-336 (371)
62 3pao_A Adenosine deaminase; st 99.1 9.8E-11 3.4E-15 117.4 8.8 213 240-500 71-295 (326)
63 3rys_A Adenosine deaminase 1; 99.0 6E-10 2E-14 112.4 11.1 211 241-499 75-297 (343)
64 4gy7_A Urease; JACK bean, hydr 99.0 1.4E-10 4.7E-15 129.8 6.6 72 42-115 334-413 (840)
65 3iar_A Adenosine deaminase; pu 99.0 2.9E-09 9.9E-14 108.2 13.9 103 366-484 192-297 (367)
66 1onw_A Isoaspartyl dipeptidase 98.9 1.8E-09 6.2E-14 110.7 7.2 66 45-114 8-73 (390)
67 3iv8_A N-acetylglucosamine-6-p 98.9 2.2E-09 7.4E-14 109.8 7.3 65 47-116 5-69 (381)
68 3pnu_A Dihydroorotase; TIM bar 98.5 6.3E-06 2.2E-10 83.5 18.9 96 329-445 112-216 (359)
69 4gxw_A Adenosine deaminase; am 98.2 9.3E-06 3.2E-10 82.8 13.8 203 240-483 89-305 (380)
70 2z26_A Dihydroorotase, dhoase; 98.0 0.00018 6E-09 72.5 17.7 80 362-445 116-205 (347)
71 2a3l_A AMP deaminase, AMPD; at 98.0 1.3E-06 4.5E-11 94.9 2.0 105 373-499 505-618 (701)
72 1o12_A N-acetylglucosamine-6-p 97.9 4.8E-06 1.7E-10 85.0 3.0 41 63-116 28-68 (376)
73 3lgd_A Adenosine deaminase CEC 97.8 3.8E-06 1.3E-10 88.4 1.3 102 365-483 308-419 (508)
74 3tn4_A Phosphotriesterase; lac 96.4 0.055 1.9E-06 54.4 14.9 72 364-439 191-263 (360)
75 3k2g_A Resiniferatoxin-binding 96.2 0.041 1.4E-06 55.5 13.0 72 364-439 188-262 (364)
76 3gtx_A Organophosphorus hydrol 95.8 0.17 5.9E-06 50.4 15.1 72 364-440 171-244 (339)
77 3pnz_A Phosphotriesterase fami 95.5 0.24 8E-06 49.2 14.5 71 364-439 166-238 (330)
78 1bf6_A Phosphotriesterase homo 95.1 0.047 1.6E-06 52.5 7.9 105 365-482 137-245 (291)
79 1yix_A Deoxyribonuclease YCFH; 94.3 0.17 5.9E-06 47.8 9.6 72 363-441 108-179 (265)
80 3rhg_A Putative phophotriester 94.2 0.41 1.4E-05 48.1 12.6 73 364-439 177-253 (365)
81 2ob3_A Parathion hydrolase; me 94.2 0.1 3.4E-06 51.8 8.0 71 364-439 146-219 (330)
82 2vc7_A Aryldialkylphosphatase; 93.4 0.17 5.6E-06 49.4 7.8 71 364-439 149-222 (314)
83 3guw_A Uncharacterized protein 93.3 0.25 8.7E-06 47.2 8.7 71 365-442 109-184 (261)
84 3ovg_A Amidohydrolase; structu 93.2 0.96 3.3E-05 45.3 13.2 71 364-439 167-240 (363)
85 1zzm_A Putative deoxyribonucle 93.1 0.6 2E-05 44.0 11.0 71 364-442 112-182 (259)
86 1j6o_A TATD-related deoxyribon 89.8 0.77 2.6E-05 43.7 7.9 72 363-441 117-188 (268)
87 3rcm_A TATD family hydrolase; 89.6 0.84 2.9E-05 44.2 8.0 72 364-442 112-183 (287)
88 2y1h_A Putative deoxyribonucle 89.5 1.2 4E-05 42.3 8.9 70 364-442 124-193 (272)
89 3ipw_A Hydrolase TATD family p 89.3 1.1 3.6E-05 44.3 8.6 71 364-441 152-223 (325)
90 1xwy_A DNAse TATD, deoxyribonu 88.9 0.87 3E-05 42.9 7.5 70 365-441 111-180 (264)
91 2gzx_A Putative TATD related D 88.1 16 0.00053 33.9 15.8 72 363-441 106-178 (265)
92 3gg7_A Uncharacterized metallo 87.9 1.4 4.9E-05 41.7 8.2 71 364-442 102-173 (254)
93 2xio_A Putative deoxyribonucle 87.6 1.3 4.4E-05 43.0 7.9 71 364-441 125-195 (301)
94 3e2v_A 3'-5'-exonuclease; stru 78.3 4.7 0.00016 40.8 7.6 76 364-441 177-279 (401)
95 4i6k_A Amidohydrolase family p 70.7 8.3 0.00028 36.9 7.1 68 364-439 135-212 (294)
96 1o12_A N-acetylglucosamine-6-p 69.2 1.6 5.3E-05 43.8 1.5 63 370-434 172-259 (376)
97 2gwn_A Dihydroorotase; zinc-bi 64.0 0.99 3.4E-05 46.4 -1.2 97 364-484 220-321 (452)
98 2ffi_A 2-pyrone-4,6-dicarboxyl 62.3 6.5 0.00022 37.2 4.4 69 364-440 122-200 (288)
99 1itu_A Renal dipeptidase; glyc 60.3 33 0.0011 34.1 9.2 64 366-439 178-250 (369)
100 4do7_A Amidohydrolase 2; enzym 56.6 29 0.00099 33.1 8.0 70 363-439 119-203 (303)
101 3cjp_A Predicted amidohydrolas 45.6 37 0.0013 31.5 6.6 71 364-440 128-204 (272)
102 3iv8_A N-acetylglucosamine-6-p 41.8 1.8E+02 0.006 28.9 11.2 22 247-268 78-99 (381)
103 1onw_A Isoaspartyl dipeptidase 39.5 42 0.0014 32.9 6.2 101 362-482 172-288 (390)
104 3irs_A Uncharacterized protein 37.3 63 0.0022 30.5 6.9 73 364-438 136-213 (291)
105 2jvf_A De novo protein M7; tet 36.8 33 0.0011 25.2 3.5 47 365-411 35-81 (96)
106 1bf6_A Phosphotriesterase homo 30.6 15 0.00051 34.5 1.1 12 104-115 6-17 (291)
107 3ij6_A Uncharacterized metal-d 29.0 63 0.0021 31.0 5.3 65 364-430 140-219 (312)
108 4e38_A Keto-hydroxyglutarate-a 28.8 1.2E+02 0.004 28.0 6.8 71 364-442 44-115 (232)
109 4d9a_A 2-pyrone-4,6-dicarbaxyl 27.1 85 0.0029 29.9 5.9 68 363-439 135-213 (303)
110 2wje_A CPS4B, tyrosine-protein 25.7 46 0.0016 30.7 3.5 33 103-142 3-35 (247)
111 3t7v_A Methylornithine synthas 25.5 2.3E+02 0.008 27.2 8.9 69 362-435 90-164 (350)
112 4h6q_A Proline dehydrogenase; 25.3 1.4E+02 0.0047 28.9 6.9 74 365-439 117-191 (312)
113 3iix_A Biotin synthetase, puta 25.2 2.9E+02 0.0099 26.3 9.5 68 362-435 83-154 (348)
114 2hbv_A 2-amino-3-carboxymucona 25.1 1E+02 0.0036 29.4 6.2 65 363-429 155-240 (334)
115 4a29_A Engineered retro-aldol 24.3 3.2E+02 0.011 25.5 8.9 74 363-438 137-231 (258)
116 3b40_A PVDM, probable dipeptid 24.2 1.3E+02 0.0043 30.4 6.6 67 366-442 193-270 (417)
117 3lab_A Putative KDPG (2-keto-3 24.1 1.6E+02 0.0056 26.7 6.8 72 363-442 22-94 (217)
118 2i5g_A Amidohydrolase; NYSGXRC 23.3 1.1E+02 0.0037 29.8 5.8 65 367-442 140-216 (325)
119 3a0s_A Sensor protein; PAS-fol 22.6 48 0.0017 23.2 2.5 26 177-202 3-28 (96)
120 3tva_A Xylose isomerase domain 22.2 2.5E+02 0.0085 25.7 8.1 79 365-444 101-189 (290)
121 2dvt_A Thermophilic reversible 21.7 80 0.0027 29.9 4.5 25 363-387 142-166 (327)
122 3da8_A Probable 5'-phosphoribo 21.5 54 0.0018 29.9 3.0 85 371-475 52-141 (215)
123 2ki0_A DS119; beta-alpha-beta, 21.3 43 0.0015 20.3 1.5 21 364-384 13-33 (36)
124 1ll8_A PAS kinase; PAS domain, 20.6 50 0.0017 25.1 2.3 30 175-204 7-37 (114)
125 2vc7_A Aryldialkylphosphatase; 20.6 27 0.00092 33.2 0.8 12 104-115 17-28 (314)
126 2f6k_A Metal-dependent hydrola 20.5 76 0.0026 29.7 4.0 23 365-387 134-156 (307)
127 3rpd_A Methionine synthase (B1 20.4 81 0.0028 31.1 4.3 33 97-143 281-313 (357)
128 3aam_A Endonuclease IV, endoiv 20.1 3.4E+02 0.012 24.4 8.6 81 364-445 86-175 (270)
129 2wm1_A 2-amino-3-carboxymucona 20.1 95 0.0033 29.6 4.7 64 364-429 153-236 (336)
No 1
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=100.00 E-value=2.8e-70 Score=588.19 Aligned_cols=406 Identities=28% Similarity=0.409 Sum_probs=355.1
Q ss_pred cEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhh-cCCCeEEEcCCCeeecccccccccccccccccccccC
Q 010613 46 DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLA-ADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (506)
Q Consensus 46 ~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~-~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~l 124 (506)
+++|+|++|+|+++..+..++|+|+||||++||+..++..+. .+.+++||++|++|+|||||+|+|+..+|.....+++
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 479999999999877677899999999999999987765543 4578999999999999999999999998888888999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 010613 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (506)
Q Consensus 125 ~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~~ 204 (506)
.+++|.++++++++++++. ||+|+||++..| ++.|++++||++ ++||++.+.|+|.+|+||+||+++|| ++
T Consensus 117 ~~~~s~~e~~~~l~~~~~~-----wi~g~G~~~~~~-~~~pt~~~LD~~--~~Pv~l~~~~~H~~~~Ns~AL~~~gi-~~ 187 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGR-----IIFGFGWDQDEL-GRWPTREDLDVI--DRPVFLYRRCFHVAVMNSKMIDLLNL-KP 187 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSS-----SEEEEEECHHHH-SSCCCHHHHTTS--SSCEEEEETTSSEEEECHHHHHHHCC-CC
T ss_pred CCCCCHHHHHHHHHHHHhh-----CEEEcccCHHHh-cCCCCHHHHhhC--CCeEEEEecCCcHhHHhHHHHHHcCC-CC
Confidence 9999999999999987653 999999999999 889999999999 99999999999999999999999999 88
Q ss_pred CCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCC-C-CHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHH
Q 010613 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPE-V-SVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (506)
Q Consensus 205 ~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~-~-s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~ 282 (506)
+++|. |+ ||+|.|+|+..+...+|. . +.+++++.++.+++++++.|||+++|++. . ++
T Consensus 188 t~~p~---------G~-tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~---------~-~~ 247 (534)
T 3icj_A 188 SKDFD---------ES-TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSV---------G-EK 247 (534)
T ss_dssp CTTEE---------TT-TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEE---------C-HH
T ss_pred CCCCC---------CC-CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCC---------C-HH
Confidence 88875 78 999999999999888887 7 99999999999999999999999999873 1 23
Q ss_pred HHHHHHHHHhcCCCeeEEEEccCccchhhHHHHHHhc-CCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCccc
Q 010613 283 FADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKT-GHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQ 361 (506)
Q Consensus 283 ~~~~~~~l~~~g~l~~Rv~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~ 361 (506)
.+++|+++.++|+|++|+..++..+. +.++.+.. ..+.+++++++|+|+|+||+++++||+|.+||.+.|+++|.+
T Consensus 248 ~~~~~~~l~~~g~l~~rv~~~~~~~~---~~~~~~~~~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~ 324 (534)
T 3icj_A 248 ALKALFELEREGRLKMNVFAYLSPEL---LDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGEL 324 (534)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEECGGG---HHHHHHHTCCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCC
T ss_pred HHHHHHHHHhCCCCcEEEEEecCHHH---HHHHHHhccccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcc
Confidence 34889999999999999997765432 23332221 234578999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 362 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
.+++|+++++++.|+++|+++++|++||++++.++++++++. .|++|+||+++++++++||+++|+.+++||.
T Consensus 325 ~~~~e~l~~~v~~A~~~G~~v~~Ha~gd~ai~~~l~a~~~~~-------~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~ 397 (534)
T 3icj_A 325 VMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAE-------FSGRIEHASLVRDDQLERIKELKVRISAQPH 397 (534)
T ss_dssp SSCHHHHHHHHHHHTTTTCEEEEEECSHHHHHHHHHHHHHHT-------CCCEEEECCBCCHHHHHHHHHHTCEEEECTT
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEcChHHHHHHHHHHHhcc-------CCCEEEECCCCCHHHHHHHHHcCCeEEEccc
Confidence 999999999999999999999999999999999999998763 6999999999999999999999999999999
Q ss_pred hHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchh
Q 010613 442 TTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFS 496 (506)
Q Consensus 442 ~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~ 496 (506)
+.+.... ...++|.++.++.+|+++++++ ++|++| |++. .+.+||..|.
T Consensus 398 ~~~~~~~-~~~~lg~~r~~~~~p~~~l~~~-v~valGSD~p~----~~~~p~~~~~ 447 (534)
T 3icj_A 398 FIVSDWW-IVNRVGEERAKWAYRLKTLSSI-TKLGFSTDSPI----EPADPWVSID 447 (534)
T ss_dssp HHHHCTT-HHHHHHHHHGGGBTCHHHHHHH-SCEEECCTTTT----SCCCHHHHHH
T ss_pred cccchhH-HHHhhCHHHHhccHHHHHHHHh-CCEEeecCCCC----CCCCHHHHHH
Confidence 8642111 1124676677789999999999 999999 9874 3455555543
No 2
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=99.95 E-value=3.5e-26 Score=242.56 Aligned_cols=309 Identities=16% Similarity=0.189 Sum_probs=197.8
Q ss_pred CcccEEEEcCEE-EeCCCCC--ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccc
Q 010613 43 LEADLVVTNGVI-FTGDDSL--LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (506)
Q Consensus 43 ~~~~~ii~n~~I-~t~~~~~--~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~ 119 (506)
.+++++|+|+++ +|+++.. ....+|+|+||||++||+..+.+ .+..++||++|++|+|||||+|+|+.+....
T Consensus 27 ~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~---~~~~~viD~~g~~v~PGlID~H~Hl~~~~~r- 102 (479)
T 3h4u_A 27 RPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP---ETADEVLDLRGHLVIPGLVNTHHHMYQSLTR- 102 (479)
T ss_dssp --CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC---SCCSEEEECTTEEEEECEEECCCCGGGGGSC-
T ss_pred hhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC---CCCCeEEeCCCCEEecceeecccccchhhhc-
Confidence 467899999995 5665432 35789999999999999875543 2578999999999999999999999754321
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 010613 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (506)
Q Consensus 120 ~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~ 199 (506)
+... + ...+..+||...
T Consensus 103 ------g~~~------------------------~-------~~~~l~~~l~~~-------------------------- 119 (479)
T 3h4u_A 103 ------AVPA------------------------A-------QNAELFGWLTNL-------------------------- 119 (479)
T ss_dssp ------SCTT------------------------T-------TTCCHHHHHHHH--------------------------
T ss_pred ------cccc------------------------c-------CCCCHHHHHHHh--------------------------
Confidence 1000 0 011222233221
Q ss_pred CCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCc
Q 010613 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (506)
Q Consensus 200 gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~ 279 (506)
....+..++++.....+.++.++++.|+|++.|++...+.. ..
T Consensus 120 ----------------------------------~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~---~~ 162 (479)
T 3h4u_A 120 ----------------------------------YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNG---SR 162 (479)
T ss_dssp ----------------------------------HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTT---CC
T ss_pred ----------------------------------hhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCc---ch
Confidence 11112457888888999999999999999999985322211 11
Q ss_pred hHHHHHHHHHHHhcCCCeeEEEEccC---cc-------------chh-hH---HHHHHhcCCcC-CCcEEEceEEEeecC
Q 010613 280 WEDFADVYQWASYSEKMKIRVCLFFP---LE-------------TWS-SL---ADLINKTGHVL-SDWVYLGGVKAFADG 338 (506)
Q Consensus 280 ~~~~~~~~~~l~~~g~l~~Rv~~~~~---~~-------------~~~-~~---~~~~~~~~~~~-~~~l~~~gvKl~~DG 338 (506)
.+ .+++...+.| +|...... .. ..+ .+ .++.+...... ... +++..
T Consensus 163 ~~---~~~~~~~~~g---~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~-- 229 (479)
T 3h4u_A 163 LD---DSIGAAQRIG---MRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAM-----LRVVV-- 229 (479)
T ss_dssp HH---HHHHHHHHHT---CEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCS-----EEEEE--
T ss_pred HH---HHHHHHHHcC---CEEEEEeeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCc-----eEEEE--
Confidence 22 2344444333 55543211 10 000 01 11111100000 111 12111
Q ss_pred CcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHHH----HHHHhcCCCCCCc
Q 010613 339 SLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRF 413 (506)
Q Consensus 339 ~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~e----~~~~~~g~~~~r~ 413 (506)
....| ..+++++++++++.|+++|+++++|+.++. .++.+++.+. +...+.|..+.|+
T Consensus 230 -------~~~~~----------~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~ 292 (479)
T 3h4u_A 230 -------APCSP----------FSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDV 292 (479)
T ss_dssp -------EESCT----------TSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTE
T ss_pred -------ecCCC----------CCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCe
Confidence 11122 357899999999999999999999999876 6666666542 3446678889999
Q ss_pred eEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCC
Q 010613 414 RIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPR 492 (506)
Q Consensus 414 ~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~ 492 (506)
.++||+++++++++++++.|+.+++||.+++ +++ .+.+|+++++++|++|++| |+++++ .+.+|+
T Consensus 293 ~i~H~~~~~~~~~~~l~~~g~~v~~~p~s~~--------~l~----~~~~~~~~~~~~Gv~v~lgtD~~~~~--~~~~~~ 358 (479)
T 3h4u_A 293 WHAHCVQLDDAGIGLFARTGTGVAHCPCSNM--------RLA----SGIAPVKKMRLAGVPVGLGVDGSASN--DGAQMV 358 (479)
T ss_dssp EEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HTT----CCCCCHHHHHHTTCCEEECCCCTTSS--CCCCHH
T ss_pred EEEEecCCCHHHHHHHHHcCCeEEEChhHhh--------hcC----CCCCCHHHHHHCCCeEEEeCCCCccC--CCcCHH
Confidence 9999999999999999999999999998743 122 3678999999999999999 988642 345566
Q ss_pred cchhhHH
Q 010613 493 NNFSYIF 499 (506)
Q Consensus 493 ~~~~~~~ 499 (506)
.+|+.++
T Consensus 359 ~~~~~~~ 365 (479)
T 3h4u_A 359 AEVRQAL 365 (479)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 3
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=99.95 E-value=1.7e-26 Score=238.94 Aligned_cols=284 Identities=19% Similarity=0.153 Sum_probs=191.6
Q ss_pred ccEEEEcCEEEeCCCCCc-eecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~-~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~ 123 (506)
.+++|+|++|++++.... ...+|+|+||||++||+..+ ...+..++||++|++|+|||||+|+|+......
T Consensus 2 ~~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~---~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~----- 73 (403)
T 3gnh_A 2 EIKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGD---AVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEV----- 73 (403)
T ss_dssp CEEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTS---CCCTTCEEEEEEEEEEEECEEEEEECTTCCTTC-----
T ss_pred ccEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCC---CCCCCCeEEECCCCEEcCCeEeeeEccccCccc-----
Confidence 468999999999985443 67799999999999997643 113578999999999999999999998632100
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 010613 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (506)
Q Consensus 124 l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~ 203 (506)
.| ++..
T Consensus 74 ------------------------------~~--------------~~~~------------------------------ 79 (403)
T 3gnh_A 74 ------------------------------GG--------------YNSL------------------------------ 79 (403)
T ss_dssp ------------------------------CS--------------GGGG------------------------------
T ss_pred ------------------------------ch--------------hhhh------------------------------
Confidence 00 0000
Q ss_pred CCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHH
Q 010613 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (506)
Q Consensus 204 ~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~ 283 (506)
..++++........++++++.|+|++.|++.. ....
T Consensus 80 -----------------------------------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~- 115 (403)
T 3gnh_A 80 -----------------------------------EYSDRFWSVVQTANAKKTLEAGFTTVRNVGAA--------DYDD- 115 (403)
T ss_dssp -----------------------------------GSCHHHHHHHHHHHHHHHHHTTEEEEEECCCS--------TTHH-
T ss_pred -----------------------------------cCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCC--------cccc-
Confidence 11344445555567889999999999999731 0111
Q ss_pred HHHHHHHHhcCC-CeeEEEEccCc-------------------------cchhhHHHHHHhcCCcCCCcEEEceEEEeec
Q 010613 284 ADVYQWASYSEK-MKIRVCLFFPL-------------------------ETWSSLADLINKTGHVLSDWVYLGGVKAFAD 337 (506)
Q Consensus 284 ~~~~~~l~~~g~-l~~Rv~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~l~~~gvKl~~D 337 (506)
..+++..++|. ...|+...... ...+...+...+..+. ....+|++.|
T Consensus 116 -~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~ik~~~~ 189 (403)
T 3gnh_A 116 -VGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKY-----GAQVIKICAT 189 (403)
T ss_dssp -HHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHT-----TCSEEEEECB
T ss_pred -HHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCCcccCCHHHHHHHHHHHHHc-----CCCEEEEeec
Confidence 23455555554 44677643211 0111122222111111 1245899999
Q ss_pred CCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEee
Q 010613 338 GSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH 417 (506)
Q Consensus 338 G~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H 417 (506)
|.+.++++. .+...+++++++++++.|+++|+++++|+.++.+++.++++ | ..+|+|
T Consensus 190 G~~~~~~~~-----------~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g----~~~i~H 246 (403)
T 3gnh_A 190 GGVFSRGNE-----------PGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRA--------G----VDTIEH 246 (403)
T ss_dssp CCSSSSSCC-----------TTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT--------T----CSEEEE
T ss_pred CCcCCCCCC-----------CccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------C----CCEEec
Confidence 998776542 34567899999999999999999999999999887776653 3 369999
Q ss_pred cccCChhHHHHHHhCCCEEEecchhHhhhhh------cCcccccccc---ccccccccchhccccccccc-ccccc
Q 010613 418 AQHLASGTAARFGDQGIVASMQVWTTFWQSI------VNPLLISTDV---WNFRYTIGPIHIIAVLVSIF-DGLFC 483 (506)
Q Consensus 418 ~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~------~~~~~~g~~~---~~~~~pi~~~~~~Gv~V~lG-D~~a~ 483 (506)
|++++++++++|++.|+.++.||....+... ..+..+...+ .....|+++++++|++|++| |++.+
T Consensus 247 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~ 322 (403)
T 3gnh_A 247 ASLVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIY 322 (403)
T ss_dssp CTTCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTB
T ss_pred CCcCCHHHHHHHHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCC
Confidence 9999999999999999999998865321100 0000000000 01235889999999999999 98754
No 4
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=99.94 E-value=8.7e-26 Score=238.84 Aligned_cols=306 Identities=19% Similarity=0.209 Sum_probs=198.7
Q ss_pred cccCCCcccEEEEcCEEEeCCCCC--------ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccc
Q 010613 38 TTTTNLEADLVVTNGVIFTGDDSL--------LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSH 109 (506)
Q Consensus 38 ~~~~~~~~~~ii~n~~I~t~~~~~--------~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H 109 (506)
|..++.+++++|+|++|+|+++.. ....+|+|+||||++||+..+ . ..+..++||++|++|+|||||+|
T Consensus 16 ~~~~~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~-~--~~~~~~viD~~g~~v~PGlID~H 92 (468)
T 3lnp_A 16 QSQPKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSS-C--QIPATETLDLGQQVLMPGWVNAH 92 (468)
T ss_dssp -----CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTT-C--CCCEEEEEECCSEEEEECEEECS
T ss_pred cCCCCccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCcc-c--cCCCCeEEeCCCcEEEeCeechh
Confidence 444555688999999999987544 457899999999999998654 1 12467899999999999999999
Q ss_pred ccccccccccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchh
Q 010613 110 VHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMG 189 (506)
Q Consensus 110 ~H~~~~g~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~ 189 (506)
+|+.+... .+.. ...+...||....
T Consensus 93 ~H~~~~~~-------~g~~---------------------------------~~~~l~~wl~~~~--------------- 117 (468)
T 3lnp_A 93 GHAAMSLF-------RGLA---------------------------------DDLPLMTWLQEHV--------------- 117 (468)
T ss_dssp CCGGGGGG-------TTSS---------------------------------CSCCHHHHHHHTH---------------
T ss_pred hChhhhhh-------ccCc---------------------------------CCCCHHHHHHHhh---------------
Confidence 99864321 1100 0112233332210
Q ss_pred hhcHHHHHHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCcc
Q 010613 190 LANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGR 269 (506)
Q Consensus 190 ~~Ns~aL~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~ 269 (506)
. .... ...++++.....+.++.++++.|+|++.|+..
T Consensus 118 ------~-----------------------------------~~~~--~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~ 154 (468)
T 3lnp_A 118 ------W-----------------------------------PAEA--QHVDEHFVKQGTELAIAEMIQSGTTTFADMYF 154 (468)
T ss_dssp ------H-----------------------------------HHHH--HHCSHHHHHHHHHHHHHHHHHTTEEEEEECCS
T ss_pred ------h-----------------------------------hhhh--ccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc
Confidence 0 0000 02367788888999999999999999999852
Q ss_pred CCCCCcccCchHHHHHHHHHHHhcCCCeeEEEEccCc---c-----chhh----HHHHHHhc-CCc--CCCcEEEceEEE
Q 010613 270 YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL---E-----TWSS----LADLINKT-GHV--LSDWVYLGGVKA 334 (506)
Q Consensus 270 ~~~g~~~~~~~~~~~~~~~~l~~~g~l~~Rv~~~~~~---~-----~~~~----~~~~~~~~-~~~--~~~~l~~~gvKl 334 (506)
..+. +.+.+.+.| +|..+.... . ..+. ..++.+.. ... .+..+ ++
T Consensus 155 ---------~~~~---~~~~~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i-----~~ 214 (468)
T 3lnp_A 155 ---------YPQQ---SGEAALAAG---IRAVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLV-----QI 214 (468)
T ss_dssp ---------CHHH---HHHHHHHHT---CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCE-----EE
T ss_pred ---------CHHH---HHHHHHHcC---CeEEEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceE-----EE
Confidence 1122 233333334 565543211 0 1111 11221110 000 01122 21
Q ss_pred eecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHHH----HHHHhcCCC
Q 010613 335 FADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYK----SVVVTTGKR 409 (506)
Q Consensus 335 ~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~e----~~~~~~g~~ 409 (506)
.+. .. +...+++++++++++.|+++|+++++|+.++. .++.+++.+. +...+.|..
T Consensus 215 ~~~---------~~----------~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~l 275 (468)
T 3lnp_A 215 GFG---------PH----------APYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRPTQRLADIGFL 275 (468)
T ss_dssp EEE---------EC----------CTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCHHHHHHHTTCC
T ss_pred EEE---------cC----------CCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 111 11 22357899999999999999999999999874 6666555431 234567888
Q ss_pred CCCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccC
Q 010613 410 DQRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVT 488 (506)
Q Consensus 410 ~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~ 488 (506)
+.|+.++||+++++++++++++.|+.+++||.+.+ +++ .+.+|+++++++|+++++| |++.++ +.
T Consensus 276 ~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~--------~~~----~~~~~~~~~~~~Gv~v~lgtD~~~~~--~~ 341 (468)
T 3lnp_A 276 NERVSCVHMTQVDDGDIKILQKTGASIIHCPESNL--------KLA----SGFCPIAKLSAANIPLAIGTDGAASN--ND 341 (468)
T ss_dssp STTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHH--------HTT----CCCCCHHHHHHTTCCEEECCCCTTSS--CC
T ss_pred CCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhh--------hcC----CCCCCHHHHHHCCCeEEEECCCCcCC--CC
Confidence 99999999999999999999999999999998743 122 4678999999999999999 988642 34
Q ss_pred CCCCcchhh
Q 010613 489 CRPRNNFSY 497 (506)
Q Consensus 489 ~~~~~~~~~ 497 (506)
.+|+.+++.
T Consensus 342 ~~~~~~~~~ 350 (468)
T 3lnp_A 342 LDMFSETKT 350 (468)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 455555543
No 5
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=99.94 E-value=2.8e-26 Score=244.19 Aligned_cols=312 Identities=14% Similarity=0.147 Sum_probs=186.2
Q ss_pred cccEEEEcCE-EEeCCCC------CceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccc
Q 010613 44 EADLVVTNGV-IFTGDDS------LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (506)
Q Consensus 44 ~~~~ii~n~~-I~t~~~~------~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g 116 (506)
+++++|+|++ |+|++.. ....++|+|+||||++||+..+ .+.+++||++|++|+|||||+|+|+..+.
T Consensus 9 ~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-----~~~~~viD~~G~~v~PG~ID~H~H~~~~~ 83 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-----RPGETIVDATDCVIYPAWVNTHHHLFQSL 83 (492)
T ss_dssp -CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-----CTTCEEEECBTCEEEECEECCCCCGGGGG
T ss_pred CCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-----CCCCeEEECCCcEEeeCccccccChhhHh
Confidence 4789999999 9998722 2357899999999999997642 13578999999999999999999987543
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHH
Q 010613 117 LQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVAL 196 (506)
Q Consensus 117 ~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL 196 (506)
.. +.... ...+...|+.+..|
T Consensus 84 ~~-------g~~~~-----------~~~~~~~~l~~~~~----------------------------------------- 104 (492)
T 2paj_A 84 LK-------GEPAG-----------LDATLTPWLAATPY----------------------------------------- 104 (492)
T ss_dssp CC-------SCC--------------------------------------------------------------------
T ss_pred hc-------CccCC-----------CCCCHHHHHHhccc-----------------------------------------
Confidence 21 11000 00111223322111
Q ss_pred HHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcc
Q 010613 197 QLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESV 276 (506)
Q Consensus 197 ~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~ 276 (506)
...+..+++++....+.+++++++.|||++.|+....+..
T Consensus 105 --------------------------------------~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~-- 144 (492)
T 2paj_A 105 --------------------------------------RFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPG-- 144 (492)
T ss_dssp ---------------------------------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTT--
T ss_pred --------------------------------------chhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccc--
Confidence 0012347788888899999999999999999986211100
Q ss_pred cCchHHHHHHHHHHHhcCCCeeEEEEccCccc-----------------h-hhHHHHHHhcCCcCC--CcEEEceEEEee
Q 010613 277 QLSWEDFADVYQWASYSEKMKIRVCLFFPLET-----------------W-SSLADLINKTGHVLS--DWVYLGGVKAFA 336 (506)
Q Consensus 277 ~~~~~~~~~~~~~l~~~g~l~~Rv~~~~~~~~-----------------~-~~~~~~~~~~~~~~~--~~l~~~gvKl~~ 336 (506)
.....+ +.+.++.+ ++++|+........ . +.+.+.......+.. +. +.+|++.
T Consensus 145 -~~~~~~-~~~~~~~~--~~g~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 217 (492)
T 2paj_A 145 -MPFDSS-AILFEEAE--KLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPR---AMRRVVM 217 (492)
T ss_dssp -CSSCHH-HHHHHHHH--HTTCEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTT---CSEEEEE
T ss_pred -cccchH-HHHHHHHH--HcCCEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCC---CceEEEE
Confidence 011122 33333322 24577765322100 0 011111110000000 00 0122211
Q ss_pred cCCcCcccccccCCcCCCCCCCcc-cCCCHHHHHHHHHHHHHCCCeEEEeeccc-hHHHHHHHHHH----HHHHhcCCCC
Q 010613 337 DGSLGSNSALFHEPYADEPHNYGL-QVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGKRD 410 (506)
Q Consensus 337 DG~~~~~ta~l~~pY~d~~~~~G~-~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd-~av~~~l~a~e----~~~~~~g~~~ 410 (506)
. ..+. ..+++++++++++.|+++|+++++|+.++ ..++.+++.+. +...+.|..+
T Consensus 218 ----------------~---~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~ 278 (492)
T 2paj_A 218 ----------------A---PTTVLYSISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAFCGEHDWLG 278 (492)
T ss_dssp ----------------C---CTTTTTSSCHHHHHHHHHHHHHTTCEEEEECC-------------CCCHHHHHHHTTCCS
T ss_pred ----------------e---cccCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHHHHHCCCCC
Confidence 0 1233 46789999999999999999999999984 45665555331 2234567777
Q ss_pred CCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCC
Q 010613 411 QRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTC 489 (506)
Q Consensus 411 ~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~ 489 (506)
.+..++||++++++++++++++|+.+++||.+.+ +++ .+.+|+++++++|+++++| |++.++ ...
T Consensus 279 ~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~~~--------~l~----~~~~p~~~~~~~Gv~v~lgTD~~~~~--~~~ 344 (492)
T 2paj_A 279 SDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNG--------RLG----SGICPVREMADAGVPVSIGVDGAASN--EAA 344 (492)
T ss_dssp TTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHH--------CC---------CCTTHHHHTCCEEECCCHHHHC--SCC
T ss_pred CCcEEEEEecCCHHHHHHHHHcCCEEEECchhhc--------ccC----CCCCCHHHHHHCCCcEEEeCCCCCCC--CCC
Confidence 8899999999999999999999999999997632 232 3678999999999999999 987532 234
Q ss_pred CCCcchhhHH
Q 010613 490 RPRNNFSYIF 499 (506)
Q Consensus 490 ~~~~~~~~~~ 499 (506)
+|+.+++.+.
T Consensus 345 ~~~~~~~~~~ 354 (492)
T 2paj_A 345 DMISEVHMTW 354 (492)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6666665543
No 6
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=99.94 E-value=3.7e-26 Score=240.52 Aligned_cols=314 Identities=17% Similarity=0.181 Sum_probs=201.8
Q ss_pred EEEEcC-EEEeCCCCC--ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccccccc
Q 010613 47 LVVTNG-VIFTGDDSL--LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (506)
Q Consensus 47 ~ii~n~-~I~t~~~~~--~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~ 123 (506)
++|+|+ .|+|+++.. ....+|+|+||||++||+..+ ..+..++||++|++|+|||||+|+|+.++...
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~----~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~----- 72 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLS----DRSVSRTIDGRGMIALPGLINSHQHLYEGAMR----- 72 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCC----CTTCSEEEECTTEEEEECEEEEEECGGGGGGB-----
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCC----CCCCCeEEeCCCCEEecCeeecccccchhhhc-----
Confidence 588999 788887532 357799999999999998632 12467999999999999999999999754321
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 010613 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (506)
Q Consensus 124 l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~ 203 (506)
+.. . + ...+..+||.... ...
T Consensus 73 --g~~-------------~-----------~-------~~~~l~~~l~~~~---------------------~~~----- 93 (456)
T 3ls9_A 73 --AIP-------------Q-----------L-------ERVTMASWLEGVL---------------------TRS----- 93 (456)
T ss_dssp --TCG-------------G-----------G-------SSCCHHHHHHHHH---------------------HHH-----
T ss_pred --ccc-------------c-----------C-------CCCCHHHHHHHhc---------------------ccc-----
Confidence 100 0 0 0112223333220 000
Q ss_pred CCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHH
Q 010613 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (506)
Q Consensus 204 ~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~ 283 (506)
..+.. ....++++.....+.++.++++.|+|++.|+....+..... ..+
T Consensus 94 ---------------------------~~~~~-~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~---~~~ 142 (456)
T 3ls9_A 94 ---------------------------AGWWR-DGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATAD---SYI 142 (456)
T ss_dssp ---------------------------HHHHH-TTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCC---THH
T ss_pred ---------------------------ccccc-cccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccc---hhH
Confidence 00111 01357888899999999999999999999984222211001 111
Q ss_pred HHHHHHHHhcCCCeeEEEEccCcc----------------chh-hHH---HHHHhcCC-cCCCcEEEceEEEeecCCcCc
Q 010613 284 ADVYQWASYSEKMKIRVCLFFPLE----------------TWS-SLA---DLINKTGH-VLSDWVYLGGVKAFADGSLGS 342 (506)
Q Consensus 284 ~~~~~~l~~~g~l~~Rv~~~~~~~----------------~~~-~~~---~~~~~~~~-~~~~~l~~~gvKl~~DG~~~~ 342 (506)
....+...+. ++|..+..... ..+ .+. ++.+.... .....+ ++.. +
T Consensus 143 ~~~~~a~~~~---g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~-~---- 209 (456)
T 3ls9_A 143 DATIEAATDL---GIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMV-----RIAL-G---- 209 (456)
T ss_dssp HHHHHHHHHH---TCEEEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSE-----EEEE-C----
T ss_pred HHHHHHHHHc---CCEEEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCce-----EEEE-e----
Confidence 1223333333 35654432110 001 111 11111000 001111 1110 0
Q ss_pred ccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHH----HHHHhcCCCCCCceEeec
Q 010613 343 NSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYK----SVVVTTGKRDQRFRIEHA 418 (506)
Q Consensus 343 ~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e----~~~~~~g~~~~r~~i~H~ 418 (506)
.++...++++.++++++.|+++|+++++|+.++.+.+.+++.+. +...+.|..+.|++++||
T Consensus 210 --------------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~ 275 (456)
T 3ls9_A 210 --------------PCGVPYDKPELFEAFAQMAADYDVRLHTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHA 275 (456)
T ss_dssp --------------CCCTTTSCHHHHHHHHHHHHHHTCEEEEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTEEEEEC
T ss_pred --------------cCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCcEEEec
Confidence 11234578999999999999999999999999887666666543 345667888899999999
Q ss_pred ccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhh
Q 010613 419 QHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSY 497 (506)
Q Consensus 419 ~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~ 497 (506)
+++++++++++++.|+.+++||.++. +++ .+.+|+++++++|++|++| |+++++ +..+|+.+|+.
T Consensus 276 ~~~~~~~~~~l~~~g~~~~~~p~s~~--------~l~----~~~~~~~~~~~~Gv~v~lgtD~~~~~--~~~~~~~~~~~ 341 (456)
T 3ls9_A 276 VVPPREEIPEFADAGVAIAHLIAPDL--------RMG----WGLAPIREYLDAGITVGFGTTGSASN--DGGNLLGDLRL 341 (456)
T ss_dssp CSCCGGGHHHHHHHTCEEEECHHHHH--------HTT----CCCCCHHHHHHTTCEEEECCCCTTSS--CCCCHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCEEEEChhHHh--------hcC----CCcchHHHHHHCCCcEEEECCCCccC--CCCCHHHHHHH
Confidence 99999999999999999999998743 232 3678999999999999999 988642 34566666655
Q ss_pred HHH
Q 010613 498 IFT 500 (506)
Q Consensus 498 ~~~ 500 (506)
++.
T Consensus 342 ~~~ 344 (456)
T 3ls9_A 342 AAL 344 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 7
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=99.94 E-value=1.5e-26 Score=243.24 Aligned_cols=303 Identities=15% Similarity=0.124 Sum_probs=200.9
Q ss_pred CcccEEEEcCEEEeCCCCC--ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccc
Q 010613 43 LEADLVVTNGVIFTGDDSL--LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (506)
Q Consensus 43 ~~~~~ii~n~~I~t~~~~~--~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~ 120 (506)
.+++++|+|++|+|+++.. ....+|+|+||||++||+..+.+ ..+..++||++|++|+|||||+|+|+.+...
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~--~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~--- 78 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA--GLEADERLELPDHVLMPGLINLHGHSAMSLL--- 78 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT--TSCEEEEEEEEEEEEEECEEEEEECGGGGGG---
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc--cCCCCeEEeCCCcEEeeCccchhhChhhHhh---
Confidence 3578999999999987543 35779999999999999876543 2346789999999999999999999864321
Q ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 010613 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (506)
Q Consensus 121 ~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~g 200 (506)
.+.. ...|..+||.+..
T Consensus 79 ----~g~~---------------------------------~~~~~~~wl~~~~-------------------------- 95 (447)
T 4f0r_A 79 ----RGLA---------------------------------DDKALMDWLTNYI-------------------------- 95 (447)
T ss_dssp ----TTSS---------------------------------CSSCHHHHHHHTH--------------------------
T ss_pred ----ccCC---------------------------------CCCCHHHHHHHhh--------------------------
Confidence 1100 0122233333210
Q ss_pred CCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCch
Q 010613 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (506)
Q Consensus 201 i~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~ 280 (506)
.... .+..++++.....+.++.++++.|+|++.|+.. ..
T Consensus 96 ------------------------------~~~~--~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~ 134 (447)
T 4f0r_A 96 ------------------------------WPTE--GKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYF---------YN 134 (447)
T ss_dssp ------------------------------HHHH--HHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBS---------CH
T ss_pred ------------------------------hhhh--hccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------CH
Confidence 0000 012367778888889999999999999999862 11
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEccCc--------cchh-hHHHHHHhcCCc-CCCcEEEceEEEeecCCcCcccccccCC
Q 010613 281 EDFADVYQWASYSEKMKIRVCLFFPL--------ETWS-SLADLINKTGHV-LSDWVYLGGVKAFADGSLGSNSALFHEP 350 (506)
Q Consensus 281 ~~~~~~~~~l~~~g~l~~Rv~~~~~~--------~~~~-~~~~~~~~~~~~-~~~~l~~~gvKl~~DG~~~~~ta~l~~p 350 (506)
+. +.+.+.+.| +|+.+.... ...+ .+.+......+. ..+. +|+... ..
T Consensus 135 ~~---~~~~~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~---------~~-- 192 (447)
T 4f0r_A 135 AA---VARAGLASG---MRTFVGCSILEFPTNYASNADDYIAKGMAERSQFLGEDL-----LTFTLA---------PH-- 192 (447)
T ss_dssp HH---HHHHHHHHT---CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHTTTTCTT-----EEEEEE---------EC--
T ss_pred HH---HHHHHHHcC---CeEEEEchhcCCCcccccCHHHHHHHHHHHHHHhcCCCc-----eEEEEe---------cC--
Confidence 22 233344434 555443211 0111 111111111111 1222 343321 01
Q ss_pred cCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccc-hHHHHHHHHH----HHHHHhcCCCCCCceEeecccCChhH
Q 010613 351 YADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGT 425 (506)
Q Consensus 351 Y~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd-~av~~~l~a~----e~~~~~~g~~~~r~~i~H~~~i~~~~ 425 (506)
+...+++++++++++.|+++|+++++|+.++ .+++.+++.+ -+...+.|..+.|+.++||+++++++
T Consensus 193 --------~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~ 264 (447)
T 4f0r_A 193 --------APYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAE 264 (447)
T ss_dssp --------CGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHH
T ss_pred --------CCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHH
Confidence 1235789999999999999999999999987 4666666543 12345578888999999999999999
Q ss_pred HHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhhH
Q 010613 426 AARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSYI 498 (506)
Q Consensus 426 i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~ 498 (506)
++++++.|+.+++||.+.+. + ..+.+|+++++++|+++++| |++.++ ...+|+.+++..
T Consensus 265 ~~~~~~~g~~~~~~p~~~~~--------~----~~~~~~~~~~~~~Gv~v~lgTD~~~~~--~~~~~~~~~~~~ 324 (447)
T 4f0r_A 265 VELAARHGLSTAHNPASNMK--------L----ASGISPVSKLMDAGVAVGIGTDGAASN--NKLDMLAETRLA 324 (447)
T ss_dssp HHHHHHHTCEEEECHHHHHH--------T----TCCCCCHHHHHHTTCEEEECCCCGGGT--CCCCHHHHHHHH
T ss_pred HHHHHHcCCEEEECchhhhh--------c----CCCCCcHHHHHHCCCcEEEeCCCCcCC--CCCCHHHHHHHH
Confidence 99999999999999987431 2 24678999999999999999 988642 345555555443
No 8
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=99.94 E-value=1.4e-25 Score=236.01 Aligned_cols=303 Identities=16% Similarity=0.161 Sum_probs=199.9
Q ss_pred CcccEEEEcCEEEeCCCCC--ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccc
Q 010613 43 LEADLVVTNGVIFTGDDSL--LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (506)
Q Consensus 43 ~~~~~ii~n~~I~t~~~~~--~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~ 120 (506)
.+++++|+|++|+|+++.. ....+|.|+||||++||+..+.. ..+..++||++|++|+|||||+|+|+.+...
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~--~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~--- 80 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAM--RHGATEIRELPGMLLAPGLVNAHGHSAMSLF--- 80 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHT--TTCEEEEEEEEEEEEEECEEECCCCGGGGGG---
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccc--cCCCCeEEeCCCCEEeecccchhhChhhHHh---
Confidence 3578999999999976433 35679999999999999875542 1246789999999999999999999864321
Q ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 010613 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (506)
Q Consensus 121 ~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~g 200 (506)
.+.. ...|...||.... .
T Consensus 81 ----~g~~---------------------------------~~~~l~~wl~~~~---------------------~---- 98 (451)
T 4dyk_A 81 ----RGLA---------------------------------DDLPLMTWLQDHI---------------------W---- 98 (451)
T ss_dssp ----TTSS---------------------------------CSSCHHHHHHHTH---------------------H----
T ss_pred ----ccCC---------------------------------CCCCHHHHHHHhh---------------------h----
Confidence 1100 0122233333210 0
Q ss_pred CCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCch
Q 010613 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (506)
Q Consensus 201 i~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~ 280 (506)
.... ...++++.....+.++.++++.|+|++.|+.. ..
T Consensus 99 -------------------------------~~~~--~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~ 136 (451)
T 4dyk_A 99 -------------------------------PAEG--QWVSEDFIRDGTELAIAEQVKGGITCFSDMYF---------YP 136 (451)
T ss_dssp -------------------------------HHHH--HHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS---------CH
T ss_pred -------------------------------hhhh--ccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------CH
Confidence 0000 02367788888999999999999999999852 11
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEccCc---c-----chh-hHHHHHHhcCCc-CCCcEEEceEEEeecCCcCcccccccCC
Q 010613 281 EDFADVYQWASYSEKMKIRVCLFFPL---E-----TWS-SLADLINKTGHV-LSDWVYLGGVKAFADGSLGSNSALFHEP 350 (506)
Q Consensus 281 ~~~~~~~~~l~~~g~l~~Rv~~~~~~---~-----~~~-~~~~~~~~~~~~-~~~~l~~~gvKl~~DG~~~~~ta~l~~p 350 (506)
+. +.+.+.+.| +|..+.... . ..+ .+.+..+....+ ..+. +|+.+. ...|
T Consensus 137 ~~---~~~a~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~---------~~~~ 196 (451)
T 4dyk_A 137 QA---ICGVVHDSG---VRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLKHHPR-----IRIAFG---------PHAP 196 (451)
T ss_dssp HH---HHHHHHHHT---CEEEEEEEECSSCBTTBSSHHHHHHHHHHHHHHTTTCSS-----EEEEEE---------ECCG
T ss_pred HH---HHHHHHHcC---CeEEEEchhhCCCCccccCHHHHHHHHHHHHHHhcCCCc-----eEEEEe---------cCCC
Confidence 22 233333334 555432211 1 111 111111111111 1122 232211 1122
Q ss_pred cCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHHH----HHHHhcCCCCCCceEeecccCChhH
Q 010613 351 YADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGT 425 (506)
Q Consensus 351 Y~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~e----~~~~~~g~~~~r~~i~H~~~i~~~~ 425 (506)
..++++.++++++.|+++|+++++|+.++. .++.+++.+. +...+.|..+.|+.++||+++++++
T Consensus 197 ----------~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~ 266 (451)
T 4dyk_A 197 ----------YTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDD 266 (451)
T ss_dssp ----------GGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCCCCHHH
T ss_pred ----------CccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEECCCCCHHH
Confidence 357899999999999999999999999874 5565555432 2345678889999999999999999
Q ss_pred HHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhhH
Q 010613 426 AARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSYI 498 (506)
Q Consensus 426 i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~ 498 (506)
++++++.|+.+++||.+.. +++ .+.+|+++++++|+++++| |++.++ +..+|+.+++.+
T Consensus 267 ~~~l~~~g~~v~~~p~s~~--------~~~----~~~~~~~~~~~~Gv~v~lgtD~~~~~--~~~~~~~~~~~~ 326 (451)
T 4dyk_A 267 LAMLVETNSSVIHCPESNL--------KLA----SGFCPVEKLWQAGVNVAIGTDGAASN--NDLDLLGETRTA 326 (451)
T ss_dssp HHHHHHHTCEEEECHHHHH--------HTT----CCCCCHHHHHHHTCCEEECCCCGGGS--SCCCHHHHHHHH
T ss_pred HHHHHHcCCEEEEChhhhh--------hcc----CCcccHHHHHhCCCeEEEECCCCccC--CCCCHHHHHHHH
Confidence 9999999999999998742 122 4678999999999999999 988642 344566655443
No 9
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=99.93 E-value=3.3e-25 Score=231.63 Aligned_cols=280 Identities=20% Similarity=0.197 Sum_probs=187.7
Q ss_pred cccEEEEcCEEEeCCCCCc-eecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~-~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~ 122 (506)
+++++|+|++|++++.... ...+|+|+||||.+||+.... .+..++||++|++|+|||||+|+|+...+..
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~---- 74 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIK----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFN---- 74 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSSC----
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCC----CCCCeEEECCCCEEcCCeEeeeeccccccCC----
Confidence 3578999999999875433 467999999999999975321 2567999999999999999999998643210
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCC
Q 010613 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (506)
Q Consensus 123 ~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~ 202 (506)
.+ ..
T Consensus 75 -----------------------------------------~~-----------------------------~~------ 78 (426)
T 2r8c_A 75 -----------------------------------------LP-----------------------------RV------ 78 (426)
T ss_dssp -----------------------------------------HH-----------------------------HH------
T ss_pred -----------------------------------------ch-----------------------------hh------
Confidence 00 00
Q ss_pred CCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHH
Q 010613 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (506)
Q Consensus 203 ~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~ 282 (506)
...+.++........++++++.|+|++.|++.. . .
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~-----~- 113 (426)
T 2r8c_A 79 -----------------------------------ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGA----G-----Y- 113 (426)
T ss_dssp -----------------------------------HHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSC----C-----H-
T ss_pred -----------------------------------ccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCc----h-----H-
Confidence 011344455566678889999999999999731 1 1
Q ss_pred HHHHHHHHHhcCC-CeeEEEEccCc------------------------------------cchhhHHHHHHhcCCcCCC
Q 010613 283 FADVYQWASYSEK-MKIRVCLFFPL------------------------------------ETWSSLADLINKTGHVLSD 325 (506)
Q Consensus 283 ~~~~~~~l~~~g~-l~~Rv~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~ 325 (506)
.+++..+.+. ...|+...... ...+.......+..+.+
T Consensus 114 ---~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g-- 188 (426)
T 2r8c_A 114 ---PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMG-- 188 (426)
T ss_dssp ---HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHT--
T ss_pred ---HHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcC--
Confidence 2333333343 45676643110 01111211111110111
Q ss_pred cEEEceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHh
Q 010613 326 WVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVT 405 (506)
Q Consensus 326 ~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~ 405 (506)
...+|++.||.+++++ .| .+...+++++++++++.|+++|+++++|+.++.+++.++++
T Consensus 189 ---~~~ik~~~~G~~~~~~----~p-------~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~al~~------- 247 (426)
T 2r8c_A 189 ---ADQIKIMASGGVASPT----DP-------VGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVRC------- 247 (426)
T ss_dssp ---CSSEEEECBCCSSSSS----CC-------SSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHT-------
T ss_pred ---CCEEEEEecCCCCCCC----CC-------cccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHc-------
Confidence 2458999999877543 22 35668899999999999999999999999998887776653
Q ss_pred cCCCCCCceEeecccCChhHHHHHHhCCCEEE-----ecchhHhhhh-hcCc---cccccccccccccccchhccccccc
Q 010613 406 TGKRDQRFRIEHAQHLASGTAARFGDQGIVAS-----MQVWTTFWQS-IVNP---LLISTDVWNFRYTIGPIHIIAVLVS 476 (506)
Q Consensus 406 ~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s-----~~P~~~~~~~-~~~~---~~~g~~~~~~~~pi~~~~~~Gv~V~ 476 (506)
| ..+++||.+++++++++|++.|+.++ ++|.+..... ...+ .+++..+.....|+++++++|++|+
T Consensus 248 -G----~~~i~H~~~~~~~~~~~~~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~ 322 (426)
T 2r8c_A 248 -G----VRTIEHGNLIDDETARLVAEHGAYVVPTLVTYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMG 322 (426)
T ss_dssp -T----CSEEEECTTCCHHHHHHHHHTTCEEECCTHHHHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEEC
T ss_pred -C----CCEEecCCcCCHHHHHHHHHcCCeEeechHHHHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3 35899999999999999999999984 3332211000 0000 1233333346789999999999999
Q ss_pred cc-ccccc
Q 010613 477 IF-DGLFC 483 (506)
Q Consensus 477 lG-D~~a~ 483 (506)
+| |++..
T Consensus 323 lgTD~~~~ 330 (426)
T 2r8c_A 323 FGTDLLGE 330 (426)
T ss_dssp CCCCCCGG
T ss_pred EecCCCCC
Confidence 99 98753
No 10
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=99.93 E-value=1.6e-25 Score=233.12 Aligned_cols=280 Identities=18% Similarity=0.141 Sum_probs=186.0
Q ss_pred cccEEEEcCEEEeCCCCCc-eecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~-~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~ 122 (506)
+++++|+|++|+++++... ...+|+|+||||.+||+.... .+..++||++|++|+|||||+|+|+......
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~----~~~~~viD~~G~~v~PGlID~H~H~~~~~~~---- 74 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVD----LPNAQAIDVRGKTVMPGFIDCHVHVLASNAN---- 74 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSSC----
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCC----CCCCeEEeCCCCEECCCeeeeEeeecccCCC----
Confidence 3578999999999985433 467999999999999975321 2577999999999999999999998643210
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCC
Q 010613 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (506)
Q Consensus 123 ~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~ 202 (506)
. | ..
T Consensus 75 --------------------------------------------~----------~----------------~~------ 78 (423)
T 3feq_A 75 --------------------------------------------L----------G----------------VN------ 78 (423)
T ss_dssp --------------------------------------------H----------H----------------HH------
T ss_pred --------------------------------------------h----------h----------------hh------
Confidence 0 0 00
Q ss_pred CCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHH
Q 010613 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (506)
Q Consensus 203 ~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~ 282 (506)
+..+.++........++++++.|+|++.|++. .. .
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~----~~-----~- 113 (423)
T 3feq_A 79 -----------------------------------ATQPNILAAIRSLPILDAMLSRGFTSVRDAGG----AD-----W- 113 (423)
T ss_dssp -----------------------------------HHSCHHHHHHTHHHHHHHHHHTTEEEEEECSS----CC-----H-
T ss_pred -----------------------------------hcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCC----ch-----H-
Confidence 01133444555667788999999999999873 11 1
Q ss_pred HHHHHHHHHhcC-CCeeEEEEccCc---------------------------------cchhhHHHHHHhcCCcCCCcEE
Q 010613 283 FADVYQWASYSE-KMKIRVCLFFPL---------------------------------ETWSSLADLINKTGHVLSDWVY 328 (506)
Q Consensus 283 ~~~~~~~l~~~g-~l~~Rv~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~l~ 328 (506)
. +++..+++ ....|+...... ...+...+...+..+.+
T Consensus 114 --~-l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g----- 185 (423)
T 3feq_A 114 --S-LMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKG----- 185 (423)
T ss_dssp --H-HHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTT-----
T ss_pred --H-HHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcC-----
Confidence 1 23333333 345676532110 01112222221111111
Q ss_pred EceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCC
Q 010613 329 LGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGK 408 (506)
Q Consensus 329 ~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~ 408 (506)
..++|++.||.+++.+ . ..+...+++++++++++.|+++|+++++|+.++.+++.++++ |
T Consensus 186 ~~~ik~~~~g~~~~~~----~-------p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l~~--------g- 245 (423)
T 3feq_A 186 ATQIKIMASGGVASPT----D-------PIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIARAVRC--------G- 245 (423)
T ss_dssp CSSEEEECBCCSSSSS----C-------CTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHH--------T-
T ss_pred CCEEEEeccCCcCCCC----C-------CcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHc--------C-
Confidence 2458999999877543 1 235667899999999999999999999999998888777653 3
Q ss_pred CCCCceEeecccCChhHHHHHHhCCCEEEec-----chhHhhhh-hcCc---cccccccccccccccchhccccccccc-
Q 010613 409 RDQRFRIEHAQHLASGTAARFGDQGIVASMQ-----VWTTFWQS-IVNP---LLISTDVWNFRYTIGPIHIIAVLVSIF- 478 (506)
Q Consensus 409 ~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~-----P~~~~~~~-~~~~---~~~g~~~~~~~~pi~~~~~~Gv~V~lG- 478 (506)
..+++||.+++++++++|++.|+.++.+ |.+..... ...+ .+++..+.....|+++++++|++|++|
T Consensus 246 ---~~~i~H~~~~~~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gT 322 (423)
T 3feq_A 246 ---VRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGS 322 (423)
T ss_dssp ---CCEEEEEEECCHHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCC
T ss_pred ---CCEEeccCcCCHHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 3599999999999999999999998433 22111000 0111 112211223567899999999999999
Q ss_pred ccccc
Q 010613 479 DGLFC 483 (506)
Q Consensus 479 D~~a~ 483 (506)
|++.+
T Consensus 323 D~~~~ 327 (423)
T 3feq_A 323 DLLGE 327 (423)
T ss_dssp CCCGG
T ss_pred CCCCC
Confidence 98743
No 11
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=99.93 E-value=2.1e-25 Score=236.58 Aligned_cols=304 Identities=15% Similarity=0.116 Sum_probs=199.7
Q ss_pred CCcccEEEEcCEEEeCCCCC--ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSL--LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~--~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~ 119 (506)
+..+|++|+|++|+|+++.. ....+|+|+||||++||+..+.+.. .+..++||++|++|+|||||+|+|+.++...
T Consensus 11 ~~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~-~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~- 88 (472)
T 4dzh_A 11 PEPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVR-FAPARTVSRPDAALMPGLVNAHTHNPMTLLR- 88 (472)
T ss_dssp CEEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHH-EEEEEEEEEEEEEEEECEEEEEECGGGGGGT-
T ss_pred CCcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhc-CCCCeEEeCCCcEEEECccccccChhhHHhc-
Confidence 34578999999999987432 3577999999999999987654321 2357899999999999999999999764321
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 010613 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (506)
Q Consensus 120 ~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~ 199 (506)
+.. ...+..+||....
T Consensus 89 ------g~~---------------------------------~~~~l~~~l~~~~------------------------- 104 (472)
T 4dzh_A 89 ------GVA---------------------------------DDLPLMVWLQQHI------------------------- 104 (472)
T ss_dssp ------TSS---------------------------------CSCCHHHHHHHTH-------------------------
T ss_pred ------ccc---------------------------------CCCCHHHHHHHhh-------------------------
Confidence 100 0112233333210
Q ss_pred CCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCc
Q 010613 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (506)
Q Consensus 200 gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~ 279 (506)
..... ...++++.....+.++.++++.|+|++.|++. .
T Consensus 105 -------------------------------~~~~~--~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------~ 142 (472)
T 4dzh_A 105 -------------------------------WPVEA--AVIGPEFVADGTTLAIAEMLRGGTTCVNENYF---------F 142 (472)
T ss_dssp -------------------------------HHHHH--HHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS---------C
T ss_pred -------------------------------hhhhh--ccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------C
Confidence 00000 01367888888999999999999999999862 1
Q ss_pred hHHHHHHHHHHHhcCCCeeEEEEccCc--------cchh-hHHHHHHhcCCc-CCCcEEEceEEEeecCCcCcccccccC
Q 010613 280 WEDFADVYQWASYSEKMKIRVCLFFPL--------ETWS-SLADLINKTGHV-LSDWVYLGGVKAFADGSLGSNSALFHE 349 (506)
Q Consensus 280 ~~~~~~~~~~l~~~g~l~~Rv~~~~~~--------~~~~-~~~~~~~~~~~~-~~~~l~~~gvKl~~DG~~~~~ta~l~~ 349 (506)
.+ ...+.+.+.| +|....... ...+ .+.+.......+ ..+.+ |+.+ ....
T Consensus 143 ~~---~~~~a~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~~~---------~~~~ 202 (472)
T 4dzh_A 143 AD---VQAAVYKQHG---FRALVGAVIIDFPTAWASSDDEYFARAGELHDQWRDDPLI-----STAF---------APHA 202 (472)
T ss_dssp HH---HHHHHHHHTT---CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHTTCSSE-----EEEE---------EECC
T ss_pred HH---HHHHHHHHhC---CeEEEEecccCCCcccccCHHHHHHHHHHHHHHhCCCCce-----EEEE---------ecCC
Confidence 12 2344444444 565432211 1111 111111110011 12232 3221 1122
Q ss_pred CcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHHH----HHHHhcCCCCCCceEeecccCChh
Q 010613 350 PYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASG 424 (506)
Q Consensus 350 pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~e----~~~~~~g~~~~r~~i~H~~~i~~~ 424 (506)
|| .+++++++++++.|+++|+++++|+.++. .+..+++.+. +...+.|..+.|+.++||++++++
T Consensus 203 ~~----------~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~~~ 272 (472)
T 4dzh_A 203 PY----------TVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEA 272 (472)
T ss_dssp TT----------TSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHH
T ss_pred CC----------CCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHH
Confidence 33 46899999999999999999999998754 4444444331 223456788899999999999999
Q ss_pred HHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhh
Q 010613 425 TAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSY 497 (506)
Q Consensus 425 ~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~ 497 (506)
+++++++.|+.+++||.+++ +++ .+.+|+++++++|++|++| |++++ ..+.+++.+|+.
T Consensus 273 ~i~~l~~~g~~v~~~p~s~~--------~~~----~~~~~~~~~~~~Gv~v~lgtD~~~~--~~~~~~~~~~~~ 332 (472)
T 4dzh_A 273 EIHLCAERGVSVVHCPESNL--------KLA----SGFCPACALQRASVNLAIGTDGCAS--NNDLDMFSENRT 332 (472)
T ss_dssp HHHHHHHHTCEEEECHHHHH--------HTT----CCCCCHHHHHHTTCEEEECCCCTTS--SCCCCHHHHHHH
T ss_pred HHHHHHHcCCEEEEChHHHH--------hcC----CCCccHHHHHHCCCCEEEECCCCcC--CCCCCHHHHHHH
Confidence 99999999999999998743 122 4678999999999999999 98864 234555555544
No 12
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=99.93 E-value=2.5e-24 Score=228.75 Aligned_cols=306 Identities=14% Similarity=0.139 Sum_probs=195.8
Q ss_pred cccEEEEcCEEEeCCCCC---ceecEEEEEC-CEEEEEeCchhhhh----hhcCCCeEEEc-CCCeeecccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSL---LFADSMAIKN-GRIVSVGNYSAVQQ----LAADGTNVLNL-QGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~---~~~~av~I~~-g~I~~vg~~~~~~~----~~~~~~~viD~-~g~~v~PGfiD~H~H~~~ 114 (506)
+++++|++..|.+..... ..+++|+|+| |||++||+..+.+. ...+..++||+ +|++|||||||+|+|..+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 467899999998875332 3578999998 99999998755421 11245689996 489999999999999876
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhh-CCCCeEEEEecCCchhhhcH
Q 010613 115 GGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDI-TPHNPVWLSRMDGHMGLANS 193 (506)
Q Consensus 115 ~g~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~-~~~~Pv~i~~~~~H~~~~Ns 193 (506)
+... |. ..+.|..+||... +|
T Consensus 110 ~~~r-------g~---------------------------------~~d~~l~~wL~~~~~p------------------ 131 (476)
T 4aql_A 110 YSFA-------GS---------------------------------SIDLPLLEWLTKYTFP------------------ 131 (476)
T ss_dssp GGGT-------TS---------------------------------CCCSCHHHHHHHTHHH------------------
T ss_pred HHHH-------HH---------------------------------hcCCCHHHHHHHhhhh------------------
Confidence 4321 11 0123444555542 11
Q ss_pred HHHHHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCC-CHHHHHHHHHHHHHHHHhcCcceEEeCccCCC
Q 010613 194 VALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEV-SVDERREALLRASNLALSRGVTTVVDFGRYYP 272 (506)
Q Consensus 194 ~aL~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~-s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~ 272 (506)
++ . .+ +++........++.++++.|+|++.++...
T Consensus 132 --~e-------------------------------------~---~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~-- 167 (476)
T 4aql_A 132 --AE-------------------------------------H---RFQNIDFAEEVYTRVVRRTLKNGTTTACYFATI-- 167 (476)
T ss_dssp --HH-------------------------------------H---GGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCS--
T ss_pred --HH-------------------------------------H---hcCCHHHHHHHHHHHHHHHHHCCeeEEEEeccc--
Confidence 00 0 11 223334455556789999999999976521
Q ss_pred CCcccCchHHHHHHHHHHHhcCCCeeEEEEccC---ccc----h----h-hH---HHHHHhcCCcCCCcEEEceEEEeec
Q 010613 273 GESVQLSWEDFADVYQWASYSEKMKIRVCLFFP---LET----W----S-SL---ADLINKTGHVLSDWVYLGGVKAFAD 337 (506)
Q Consensus 273 g~~~~~~~~~~~~~~~~l~~~g~l~~Rv~~~~~---~~~----~----~-~~---~~~~~~~~~~~~~~l~~~gvKl~~D 337 (506)
..+....+.+...+.| +|..+... ... + + .+ .++++......++.+ +..+.
T Consensus 168 ------~~~~~~~~~~a~~~~G---~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v-----~~~l~ 233 (476)
T 4aql_A 168 ------HTDSSLLLADITDKFG---QRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRV-----KPIVT 233 (476)
T ss_dssp ------CHHHHHHHHHHHHHHT---CEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSE-----EECBE
T ss_pred ------CchHHHHHHHHHHHhC---CEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCce-----EEEEe
Confidence 1232223344444444 67654321 110 1 1 11 122211000011222 21110
Q ss_pred CCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHHH------HHHHhcCCCC
Q 010613 338 GSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYK------SVVVTTGKRD 410 (506)
Q Consensus 338 G~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~e------~~~~~~g~~~ 410 (506)
.. ..+.++++.++++++.|+++|+++++|+.++. .++.+++.+. +...+.|..+
T Consensus 234 ---------p~----------~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~ 294 (476)
T 4aql_A 234 ---------PR----------FSLSCSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLT 294 (476)
T ss_dssp ---------EC----------CTTTSCHHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSHHHHHHTTTCCS
T ss_pred ---------CC----------cCCcCCHHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCHHHHHHHcCCCC
Confidence 11 22357899999999999999999999999866 4555544322 2445678888
Q ss_pred CCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCC
Q 010613 411 QRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTC 489 (506)
Q Consensus 411 ~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~ 489 (506)
.|..++||++++++++++|++.|+.+++||.++. ++ .++.+|+++++++|++|++| |+++. .+.
T Consensus 295 ~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~--------~l----~~g~~p~~~~~~~Gv~v~lGtD~~~~---~~~ 359 (476)
T 4aql_A 295 NKTVMAHGCYLSAEELNVFHERGASIAHCPNSNL--------SL----SSGFLNVLEVLKHEVKIGLGTDVAGG---YSY 359 (476)
T ss_dssp TTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HT----TCCCCCHHHHHHTTCEEEECCCTTTS---SCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhh--------hh----CcchHHHHHHHHCCCcEEEeCCCCCC---CCC
Confidence 9999999999999999999999999999998742 23 24789999999999999999 98643 355
Q ss_pred CCCcchhhHH
Q 010613 490 RPRNNFSYIF 499 (506)
Q Consensus 490 ~~~~~~~~~~ 499 (506)
+++.+|+.++
T Consensus 360 ~~~~~~~~a~ 369 (476)
T 4aql_A 360 SMLDAIRRAV 369 (476)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6666665443
No 13
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.92 E-value=5.1e-24 Score=221.98 Aligned_cols=295 Identities=16% Similarity=0.121 Sum_probs=188.7
Q ss_pred CcccEEEEcCEEEeCCCCCc-eecEEEEECCEEEEEeCchhhhhhhcCCC--eEEEcCCCeeeccccccccccccccccc
Q 010613 43 LEADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGT--NVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (506)
Q Consensus 43 ~~~~~ii~n~~I~t~~~~~~-~~~av~I~~g~I~~vg~~~~~~~~~~~~~--~viD~~g~~v~PGfiD~H~H~~~~g~~~ 119 (506)
..++++|+|++|++++.... ...+|+|+||||++||+.. . .+.. ++||++|++|+|||||+|+|+..++..
T Consensus 5 ~~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~----~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~- 78 (418)
T 2qs8_A 5 VDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-I----SSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQS- 78 (418)
T ss_dssp --CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-C----CCTTSSEEEEEEEEEEEECEEEEEECTTCCCCC-
T ss_pred CCccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-C----CCCCcceEEECCCCEECCCeeeeeeccccCCCC-
Confidence 34688999999999875433 4579999999999999753 1 2356 899999999999999999998642100
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 010613 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (506)
Q Consensus 120 ~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~ 199 (506)
. .| +.+
T Consensus 79 ---------------------------~------~~---------------~~~-------------------------- 84 (418)
T 2qs8_A 79 ---------------------------K------AQ---------------API-------------------------- 84 (418)
T ss_dssp ---------------------------T------TT---------------SCS--------------------------
T ss_pred ---------------------------C------ch---------------hhh--------------------------
Confidence 0 00 000
Q ss_pred CCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCc
Q 010613 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (506)
Q Consensus 200 gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~ 279 (506)
..++++........++++++.|||++.|++.. . .
T Consensus 85 ---------------------------------------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~---~ 118 (418)
T 2qs8_A 85 ---------------------------------------KVEREMQAILATQHAYVTFKSGFTTVRQVGDS----G---L 118 (418)
T ss_dssp ---------------------------------------CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCS----S---S
T ss_pred ---------------------------------------cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCC----c---c
Confidence 01333334444567888999999999998521 0 1
Q ss_pred hHHHHHHHHHHHhcCC-CeeEEEEccCc--------c---------------------chhhHHHHHHhcCCcCCCcEEE
Q 010613 280 WEDFADVYQWASYSEK-MKIRVCLFFPL--------E---------------------TWSSLADLINKTGHVLSDWVYL 329 (506)
Q Consensus 280 ~~~~~~~~~~l~~~g~-l~~Rv~~~~~~--------~---------------------~~~~~~~~~~~~~~~~~~~l~~ 329 (506)
.. ..++++.+.|. .+.|+...... + ..+...++........ .
T Consensus 119 ~~---~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~ 190 (418)
T 2qs8_A 119 VA---ISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDG-----A 190 (418)
T ss_dssp HH---HHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHT-----C
T ss_pred cc---HHHHHHHHCCCCCCCeEEecCccccccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcC-----C
Confidence 11 23555556665 34565432100 0 0011122221110011 2
Q ss_pred ceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCC
Q 010613 330 GGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKR 409 (506)
Q Consensus 330 ~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~ 409 (506)
..+|+++||++.+.++ ..|...+++++++++++.|+++|+++++|+.++.+++.+++. |
T Consensus 191 ~~ik~~~~g~~~~~~~-----------~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g-- 249 (418)
T 2qs8_A 191 DGIKITVTGGVLSVAK-----------SGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAIKA--------G-- 249 (418)
T ss_dssp SEEEEECBCCSSSSSS-----------CSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------T--
T ss_pred CEEEEEecCCCCCCCC-----------CCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHc--------C--
Confidence 3589999998765443 124567899999999999999999999999998887776642 3
Q ss_pred CCCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCc---ccccc----ccc-----cccccccchhcccccccc
Q 010613 410 DQRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNP---LLIST----DVW-----NFRYTIGPIHIIAVLVSI 477 (506)
Q Consensus 410 ~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~---~~~g~----~~~-----~~~~pi~~~~~~Gv~V~l 477 (506)
+.+|+|+++++++++++|+++|+.+ ||.+..+...... ..++. ++. ....|+++++++|+++++
T Consensus 250 --~~~i~H~~~~~~~~i~~l~~~gv~v--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~ 325 (418)
T 2qs8_A 250 --VDSIEHGTFMDLEAMDLMIENGTYY--VPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAF 325 (418)
T ss_dssp --CSEEEECTTCCHHHHHHHHHHTCEE--ECCHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred --CCEEEECCCCCHHHHHHHHHCCCEE--eeeechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3689999999999999999999875 4654321111000 00110 000 124678999999999999
Q ss_pred c-cccccccccCCCCCcchhhHH
Q 010613 478 F-DGLFCYMLVTCRPRNNFSYIF 499 (506)
Q Consensus 478 G-D~~a~~~~~~~~~~~~~~~~~ 499 (506)
| |++.. ...+++.+++.+.
T Consensus 326 gTD~~~~---~~~~~~~e~~~~~ 345 (418)
T 2qs8_A 326 GTDAGVQ---KHGTNWKEFVYMV 345 (418)
T ss_dssp CCCBTTB---CTTCTTHHHHHHH
T ss_pred eCCCCcC---CcchHHHHHHHHH
Confidence 9 98642 1335566665543
No 14
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=99.92 E-value=3.6e-24 Score=224.07 Aligned_cols=315 Identities=14% Similarity=0.146 Sum_probs=192.2
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~ 123 (506)
+++++|+|++|+|++ ...+|+|+||||++||+..+.. .+..++||++|++|+|||||+|+|+.....
T Consensus 7 ~~~~li~n~~v~~~~----~~~~v~I~~g~I~~vg~~~~~~---~~~~~viD~~G~~v~PGlID~H~Hl~~~~~------ 73 (430)
T 1ra0_A 7 NALQTIINARLPGEE----GLWQIHLQDGKISAIDAQSGVM---PITENSLDAEQGLVIPPFVEPHIHLDTTQT------ 73 (430)
T ss_dssp -CCCEEEEEBCTTCC----SEEEEEEETTEEEEEEEESSCC---CCCTTEEECTTCEEESCEEEEEECTTTTTC------
T ss_pred CCcEEEEeeEecCCC----ceeEEEEECCEEEEeecCCCCC---CCCcceEccCCCEecccccccccchhhhhh------
Confidence 467899999999875 4679999999999999764321 135689999999999999999999864321
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 010613 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (506)
Q Consensus 124 l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~ 203 (506)
.+.. . |. ...+..+||+.
T Consensus 74 -~~~~-------------------~------~~-----~~~~~~~~l~~------------------------------- 91 (430)
T 1ra0_A 74 -AGQP-------------------N------WN-----QSGTLFEGIER------------------------------- 91 (430)
T ss_dssp -TTSS-------------------S------CC-----SSCCHHHHHHH-------------------------------
T ss_pred -cCCC-------------------c------CC-----CCCCHHHHHHH-------------------------------
Confidence 0000 0 00 00111122221
Q ss_pred CCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHH
Q 010613 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (506)
Q Consensus 204 ~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~ 283 (506)
+....+..+.++.....+.+++++++.|||++.|+... . .... ..+
T Consensus 92 -----------------------------~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~-~~~~---~~~ 137 (430)
T 1ra0_A 92 -----------------------------WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDV-S-DATL---TAL 137 (430)
T ss_dssp -----------------------------HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC-C-STTC---HHH
T ss_pred -----------------------------hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeecccc-C-ChHH---HHH
Confidence 11122345788888899999999999999999998621 0 0100 111
Q ss_pred HHHHHHHHh--cCCCeeEEEEccCccc--hhhHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCc
Q 010613 284 ADVYQWASY--SEKMKIRVCLFFPLET--WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYG 359 (506)
Q Consensus 284 ~~~~~~l~~--~g~l~~Rv~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G 359 (506)
+.+.++.+ .+.+.+.+..+..... .+...+...+..+... ++ ++. ....||.
T Consensus 138 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~-------~~~---~~~~~~~------- 193 (430)
T 1ra0_A 138 -KAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGA------DV-------VGA---IPHFEFT------- 193 (430)
T ss_dssp -HHHHHHHHHHTTTCEEEEEEECTTCSSSSTTHHHHHHHHHHTTC------SE-------ECC---CGGGSSS-------
T ss_pred -HHHHHHHHhhhhhEEEEEEecCCcccccCchHHHHHHHHHHhCC------Ce-------Eee---eeccccc-------
Confidence 22332211 3444444332211000 1111111111000000 11 111 1123331
Q ss_pred ccCCCHHHHHHHHHHHHHCCCeEEEeecc-chHHHHHHHHHHHHHHhcCCCCCCceEeecccCChh-------HHHHHHh
Q 010613 360 LQVMELESLLSMTMASDKSGLQVAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASG-------TAARFGD 431 (506)
Q Consensus 360 ~~~~s~e~l~~~~~~a~~~g~~v~iHa~G-d~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~-------~i~r~a~ 431 (506)
..+++++++++++.|+++|+++++|+.+ +.+++.+++.+.+...+.|. +.|++++|+++++++ ++++|++
T Consensus 194 -~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~ 271 (430)
T 1ra0_A 194 -REYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKM 271 (430)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHHHHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHH
Confidence 1268899999999999999999999976 33544455544455555665 778999999999986 9999999
Q ss_pred CCCEEEecchhHh-hhhhcCccccccccccccccccchhccccccccc-cccccc--cccCCCCCcchhh
Q 010613 432 QGIVASMQVWTTF-WQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCY--MLVTCRPRNNFSY 497 (506)
Q Consensus 432 lgv~~s~~P~~~~-~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~--~~~~~~~~~~~~~ 497 (506)
.|+.+++||.+.. +.... .+....++..|+++++++|+++++| |++.++ +....+++.+++.
T Consensus 272 ~gv~v~~~p~~~~~~~~~~----~~~p~~~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~ 337 (430)
T 1ra0_A 272 SGINFVANPLVNIHLQGRF----DTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHM 337 (430)
T ss_dssp HTCEEEECHHHHHHHTTTT----CCSSCCCCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHH
T ss_pred cCCEEEECchhhhhhcccc----CCCCCcCCCCCHHHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHH
Confidence 9999999997642 22110 1111234678899999999999999 986421 2334455555543
No 15
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.92 E-value=1.4e-23 Score=218.68 Aligned_cols=306 Identities=18% Similarity=0.168 Sum_probs=179.4
Q ss_pred cccEEEEcCEEEeCCCC----C-ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDS----L-LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQ 118 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~----~-~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~ 118 (506)
.++++|+|++|+|+++. . ...++|+|+||||++||+..+.+...++.+++||++|++|+|||||+|+|+..++.
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~- 92 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGN- 92 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSC-
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhh-
Confidence 46899999999998753 2 25789999999999999765432212234689999999999999999999875442
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHH
Q 010613 119 MARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQL 198 (506)
Q Consensus 119 ~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~ 198 (506)
..+++...+. |.+ ..+.. .
T Consensus 93 ----------~~~~~~~~~~-------------~~~------------~~~~~--------------------------~ 111 (419)
T 2puz_A 93 ----------RAMEFEMRLN-------------GAT------------YEEIA--------------------------K 111 (419)
T ss_dssp ----------CHHHHHHHHT-------------TCC------------HHHHH--------------------------H
T ss_pred ----------hHHHHHHHhc-------------CCC------------HHHHH--------------------------h
Confidence 1122211110 000 00000 0
Q ss_pred cCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccC
Q 010613 199 VGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQL 278 (506)
Q Consensus 199 ~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~ 278 (506)
.||-+. .. ....+..+.+++......+++++++.|+|++.|+.. + +....
T Consensus 112 ----------~~gg~~-----------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~-~-~~~~~- 161 (419)
T 2puz_A 112 ----------AGGGIV-----------SS------VRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSG-Y-GLDIE- 161 (419)
T ss_dssp ----------TTCSHH-----------HH------HHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECC-S-CCSHH-
T ss_pred ----------cCCCee-----------cc------hhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCC-C-CCCch-
Confidence 011010 00 001123367777788888899999999999998531 1 11100
Q ss_pred chHHHHHHHHHHHhcCCCeeEEEEccC---ccc--hh-hHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcC
Q 010613 279 SWEDFADVYQWASYSEKMKIRVCLFFP---LET--WS-SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYA 352 (506)
Q Consensus 279 ~~~~~~~~~~~l~~~g~l~~Rv~~~~~---~~~--~~-~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~ 352 (506)
.....+++++++. .++++|+...+. ... +. ...+...... .+. ++ .+..++|.
T Consensus 162 ~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~-----------~~~~~~~~ 220 (419)
T 2puz_A 162 TELKMLRVARRLE--TLRPVRIVTSYLAAHATPADYKGRNADYITDVV---LPG-----LE-----------KAHAEGLA 220 (419)
T ss_dssp HHHHHHHHHHHHT--TTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTH---HHH-----HH-----------HHHHTTCC
T ss_pred hHHHHHHHHHHHh--hhcCceEEEEecccccCchhhcccHHHHHHHHH---hhh-----hh-----------hhhhcccc
Confidence 0011223344332 346677653211 110 00 0011111000 000 00 00011221
Q ss_pred CC-CCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHh
Q 010613 353 DE-PHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD 431 (506)
Q Consensus 353 d~-~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~ 431 (506)
+. +...+...+++++++++++.|+++|+++++|+.+..... .++.+. +.| ++.++||++++++++++|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~----~~~~~~-~~g----~~~~~H~~~~~~~~~~~~~~ 291 (419)
T 2puz_A 221 DAVDGFCEGIAFSVKEIDRVFAAAQQRGLPVKLHAEQLSNLG----GAELAA-SYN----ALSADHLEYLDETGAKALAK 291 (419)
T ss_dssp SEECCEESTTSBCHHHHHHHHHHHHHTTCCBEEEESSSSCCS----HHHHHH-HTT----CSEEEECTTCCHHHHHHHHH
T ss_pred cccccccCCCCcCHHHHHHHHHHHHHCCCcEEEEecccccCC----HHHHHH-hcC----CceehHhccCCHHHHHHHHH
Confidence 10 011122356899999999999999999999998643111 112221 223 46899999999999999999
Q ss_pred CCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccc
Q 010613 432 QGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLF 482 (506)
Q Consensus 432 lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a 482 (506)
+|+.+++||.+.+. + +..+.+|++.++++|+++++| |+++
T Consensus 292 ~g~~~~~~p~~~~~--------l---~~~~~~~~~~~~~~Gv~~~lgsD~~~ 332 (419)
T 2puz_A 292 AGTVAVLLPGAFYA--------L---REKQLPPVQALRDAGAEIALATDCNP 332 (419)
T ss_dssp HTCEEEECHHHHHH--------H---TCCCCCCHHHHHHHTCCEEECCCCCS
T ss_pred cCCcEEECCchhhh--------h---cccccccHHHHHHCCCeEEEECCCCC
Confidence 99999999987532 1 012568999999999999999 9753
No 16
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.92 E-value=2.7e-24 Score=224.30 Aligned_cols=302 Identities=19% Similarity=0.181 Sum_probs=177.1
Q ss_pred ccEEEEc-CEEEeCCCCC------------ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccc
Q 010613 45 ADLVVTN-GVIFTGDDSL------------LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVH 111 (506)
Q Consensus 45 ~~~ii~n-~~I~t~~~~~------------~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H 111 (506)
+|++|+| ++|+|+++.. ...++|+|+||||++||+..+.... +.+++||++|++|+|||||+|+|
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~--~~~~viD~~G~~v~PGfID~H~H 82 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGY--EADEIIDCSGRLVTPGLVDPHTH 82 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTC--EEEEEEECTTCEEEECEEECCBC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccC--CCCeEEeCCCCEeccCeeccCcC
Confidence 6789999 9999887532 2478999999999999975310000 13579999999999999999999
Q ss_pred ccccccccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhh
Q 010613 112 FIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLA 191 (506)
Q Consensus 112 ~~~~g~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~ 191 (506)
+..++.. .+++...++ |.+| ..+..
T Consensus 83 ~~~~~~~-----------~~~~~~~~~-------------g~~~------------~~~~~------------------- 107 (421)
T 2bb0_A 83 LVFGGSR-----------EKEMNLKLQ-------------GISY------------LDILA------------------- 107 (421)
T ss_dssp CCCCSCC-----------GGGHHHHHT-------------TCCH------------HHHHH-------------------
T ss_pred ccccccc-----------hHHHHHHHh-------------CCCH------------HHHhh-------------------
Confidence 8754321 111111110 0000 00000
Q ss_pred cHHHHHHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCC
Q 010613 192 NSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYY 271 (506)
Q Consensus 192 Ns~aL~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~ 271 (506)
.||-+ ... ....+..+.+++......+++++++.|+|++.|+.. +
T Consensus 108 -----------------~gggi-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~-~ 152 (421)
T 2bb0_A 108 -----------------QGGGI-----------LST------VKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSG-Y 152 (421)
T ss_dssp -----------------TTCTH-----------HHH------HHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECC-S
T ss_pred -----------------cCCCc-----------ccc------hhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccc-c
Confidence 01101 000 001123467777888888999999999999999641 1
Q ss_pred CCCcccCchHHHHHHHHHHHhcCCCeeEEEEcc----Ccc-chh-hHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccc
Q 010613 272 PGESVQLSWEDFADVYQWASYSEKMKIRVCLFF----PLE-TWS-SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA 345 (506)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~l~~~g~l~~Rv~~~~----~~~-~~~-~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta 345 (506)
+...+. ....+++++++.++ +++|+.... ... ... ...+..+. +.| .+. .
T Consensus 153 -~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~~~---~ 208 (421)
T 2bb0_A 153 -GLEKET-ELKQLRVAKKLHES--QPVDLVSTFMGAHAIPPEYQNDPDDFLDQ----------------MLS-LLP---E 208 (421)
T ss_dssp -CCSHHH-HHHHHHHHHHHHHH--SSSEEEEEEEEESSCCGGGTTCHHHHHHH----------------HHT-THH---H
T ss_pred -CcCccc-hHHHHHHHHHHHhh--cCceEEEEeeccccCChhhcccHHHHHHH----------------HHH-hhH---H
Confidence 111000 01122445544333 345554211 011 110 01111110 011 000 0
Q ss_pred cccCCcCCC-CCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChh
Q 010613 346 LFHEPYADE-PHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASG 424 (506)
Q Consensus 346 ~l~~pY~d~-~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~ 424 (506)
++.++|.+. +...+...+++++++++++.|+++|+++++|+.+.... +.++.+. +.| ++.++||++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~v~~H~~~~~~~----~~~~~~~-~~g----~~~~~H~~~~~~~ 279 (421)
T 2bb0_A 209 IKEQELASFADIFTETGVFTVSQSRRYLQKAAEAGFGLKIHADEIDPL----GGAELAG-KLK----AVSADHLVGTSDE 279 (421)
T ss_dssp HHHTTCCSEEEEBBCTTSBCHHHHHHHHHHHHHTTCEEEEEECSSSCC----SHHHHHH-HTT----CSEEEECTTCCHH
T ss_pred hhccCccccccccCCcCCCCHHHHHHHHHHHHHCCCCEEEEecccccc----CHHHHHH-HcC----CcEEhhhhcCCHH
Confidence 011122111 00112234689999999999999999999999764321 1122221 223 5689999999999
Q ss_pred HHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccc
Q 010613 425 TAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLF 482 (506)
Q Consensus 425 ~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a 482 (506)
++++|+++|+.+++||.+.+. +. ..+.+|+++++++|+++++| |+++
T Consensus 280 ~i~~~~~~g~~~~~~p~~~~~--------l~---~~~~~~~~~~~~~Gv~v~lgtD~~~ 327 (421)
T 2bb0_A 280 GIKKLAEAGTIAVLLPGTTFY--------LG---KSTYARARAMIDEGVCVSLATDFNP 327 (421)
T ss_dssp HHHHHHHHTCEEEECHHHHHH--------TT---CCCCCCHHHHHHTTCCEEECCCBBT
T ss_pred HHHHHHHcCCeEEECCchhhh--------hc---ccccchHHHHHHCCCeEEEeCCCCC
Confidence 999999999999999987532 11 12568999999999999999 9764
No 17
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=99.91 E-value=1.7e-23 Score=220.74 Aligned_cols=299 Identities=16% Similarity=0.125 Sum_probs=178.1
Q ss_pred CcccEEEEcCEEEeCCCCCc-eecEEEE-ECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccc
Q 010613 43 LEADLVVTNGVIFTGDDSLL-FADSMAI-KNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (506)
Q Consensus 43 ~~~~~ii~n~~I~t~~~~~~-~~~av~I-~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~ 120 (506)
..++++|+|++|+|++...+ ...+|+| +||||++||+..+... .+..++||++|++|+|||||+|+|+..++..
T Consensus 11 ~~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~--~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~-- 86 (458)
T 2p9b_A 11 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSI--PAEYHYLDGTGKIVMPGLINAHTHLFSQGKP-- 86 (458)
T ss_dssp CCCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCC--CTTCEEEECTTCEEEECEEEEEECSCC------
T ss_pred CCCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCC--CCCCeEEECCCCEEccceeeeeecccccccc--
Confidence 45788999999999875433 3479999 9999999997322211 1356899999999999999999999754321
Q ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 010613 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (506)
Q Consensus 121 ~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~g 200 (506)
.....+.+++... +.....+
T Consensus 87 ---~~~~~~~~~~~~~---------------------------------~~~~~~~------------------------ 106 (458)
T 2p9b_A 87 ---LNPKLATPKGQRM---------------------------------VATFAHS------------------------ 106 (458)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---ccccccchhhhhh---------------------------------hhhhhhh------------------------
Confidence 0000111111000 0000000
Q ss_pred CCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCch
Q 010613 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (506)
Q Consensus 201 i~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~ 280 (506)
..+.+.....++.+.+.+++.|||++.|+... . ..
T Consensus 107 --------------------------------------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~---~~ 141 (458)
T 2p9b_A 107 --------------------------------------PLGKPYMAATVKHNATTLLESGVTTIRTLGDV----G---YE 141 (458)
T ss_dssp -------------------------------------------CHHHHHHHHHHHHHHTTEEEEEESCCS----S---SH
T ss_pred --------------------------------------cccccHHHHHHHHHHHHHHHcCCcEEEeCCCC----c---cc
Confidence 00111123455668899999999999998621 0 11
Q ss_pred HHHHHHHHHHHhcCCCe-eEEEEccCc----------------cchhhHHHHHHhcCCcCCCcEEEceEEEeecCCcCcc
Q 010613 281 EDFADVYQWASYSEKMK-IRVCLFFPL----------------ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSN 343 (506)
Q Consensus 281 ~~~~~~~~~l~~~g~l~-~Rv~~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ 343 (506)
. ..++++.+.+.+. .|+....+. ...+...+......+.. .+.+|+|.||++.+.
T Consensus 142 ~---~~~~~~~~~g~~~g~r~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~g~~~~~ 213 (458)
T 2p9b_A 142 V---VTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAG-----VNAIKIAATGGVTDA 213 (458)
T ss_dssp H---HHHHHHHHTTSSCCCEEECCCSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTT-----CSCEEEECSCCTTSC
T ss_pred c---HHHHHHHHcCCCCCCeEEecccccccCCCCCccccCccCCCHHHHHHHHHHHHHcC-----CCEEEEEecCCcCCC
Confidence 1 3455555666543 576532110 11112222221111111 235899999987655
Q ss_pred cccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCCh
Q 010613 344 SALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS 423 (506)
Q Consensus 344 ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~ 423 (506)
++ | + ..|.+.+++++++++++.|+++|+++++|+.++.+++.++++ | +..++|++.+++
T Consensus 214 ~~-----~-~---~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~i~~~~~~--------G----~~~i~H~~~~~~ 272 (458)
T 2p9b_A 214 QE-----I-G---EAGSPQMSVEQMRAICDEAHQYGVIVGAHAQSPEGVRRSLLA--------G----VDTIEHGSVLDD 272 (458)
T ss_dssp CC-----C----------CCCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHH--------T----CSEEEECCCCCH
T ss_pred Cc-----c-C---CCCCCcCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc--------C----CCEEEECCCCCH
Confidence 43 2 1 124457899999999999999999999999998877665542 3 368999999999
Q ss_pred hHHHHHH------hCCCEEEecchh--HhhhhhcCcc----------ccccccccccccccchhccccccccc-ccc
Q 010613 424 GTAARFG------DQGIVASMQVWT--TFWQSIVNPL----------LISTDVWNFRYTIGPIHIIAVLVSIF-DGL 481 (506)
Q Consensus 424 ~~i~r~a------~lgv~~s~~P~~--~~~~~~~~~~----------~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~ 481 (506)
+++++++ +.|+.+ +|.+ ..+....... +...+......++++++++|+++++| |.+
T Consensus 273 ~~~~~~~~~~~~~~~g~~v--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~ 347 (458)
T 2p9b_A 273 ELIGMFRHNPNALRGYSAL--IPTLSAGLPLTLLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTG 347 (458)
T ss_dssp HHHHHHHCCTTSTTSCCEE--ECCHHHHHHHHHSCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTT
T ss_pred HHHHHHhcccccccCCeEE--EeecchhhHHHhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 9999999 999876 3544 2110000000 00000012346889999999999999 964
No 18
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.91 E-value=5.6e-23 Score=215.30 Aligned_cols=293 Identities=13% Similarity=0.117 Sum_probs=185.4
Q ss_pred EEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccccccCCC
Q 010613 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~l~~ 126 (506)
++|+|++|+++++ ...+++|+| ||||++||+..+++.. .++.++||++|++|+|||||+|+|+.++... +
T Consensus 2 ~~i~~~~v~~~~~-~~~~~~v~i-~g~I~~Vg~~~~~~~~-~~~~~vid~~g~~v~PGlId~H~H~~~~~~r-------g 71 (427)
T 3v7p_A 2 RIIKPFAILTPQT-IIQDKAVAF-DKKIEAIDTVENLIKK-YPNAAVEHDENSLLLPGFANPHLHLEFSANK-------A 71 (427)
T ss_dssp EEEEEEEEECSSS-EEESCEEEE-SSBEEEEECHHHHHHH-CTTSEEEEEEEEEEEECEEEEEECGGGTTCS-------S
T ss_pred EEEECCEEEcCCC-EEeCcEEEE-CCEEEEecChhhhccc-cCCceEEeCCCCEEecCEeecccCcchhhcc-------c
Confidence 5899999999986 556789999 9999999987665421 2467899999999999999999999765421 1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCC
Q 010613 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (506)
Q Consensus 127 ~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~~~~ 206 (506)
.. +..+..+||.... ...
T Consensus 72 ~~---------------------------------~~~~l~~wl~~~~---------------------~~~-------- 89 (427)
T 3v7p_A 72 TL---------------------------------QYGDFIPWLYSVI---------------------RHR-------- 89 (427)
T ss_dssp CS---------------------------------CCSSHHHHHHHHH---------------------HHH--------
T ss_pred cc---------------------------------ccCCHHHHHHHHH---------------------HhH--------
Confidence 00 0011122332210 000
Q ss_pred CCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHHHHH
Q 010613 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (506)
Q Consensus 207 ~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~~~~ 286 (506)
. ..++++.....+.++.++++.|+|++.|+.. +. . .
T Consensus 90 ---------------------------~----~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~-~~--------~----~ 125 (427)
T 3v7p_A 90 ---------------------------E----DLLPLCDGACLEQTLSSIIQTGTTAIGAISS-YG--------E----D 125 (427)
T ss_dssp ---------------------------H----HHHHHSCHHHHHHHHHHHHHTTEEEEEEEES-SS--------T----T
T ss_pred ---------------------------H----hcCHHHHHHHHHHHHHHHHHhCCEEEEEecC-cH--------H----H
Confidence 0 0123344667888999999999999999863 11 1 1
Q ss_pred HHHHHhcCCCeeEEEEccCc---cc--h-hhHHHHHH---hcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCC
Q 010613 287 YQWASYSEKMKIRVCLFFPL---ET--W-SSLADLIN---KTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHN 357 (506)
Q Consensus 287 ~~~l~~~g~l~~Rv~~~~~~---~~--~-~~~~~~~~---~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~ 357 (506)
.+.+.+. ++|..++... .. . +...++.+ ......+..++. .+ ..+.||
T Consensus 126 ~~a~~~~---Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~---------~~~~~~------ 182 (427)
T 3v7p_A 126 LQACIDS---ALKVVYFNEVIGSNAATADVMYASFLERFHQSKKHENERFKA-----AV---------AIHSPY------ 182 (427)
T ss_dssp HHHHHHB---SSEEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTCBTTEEE-----EE---------EECCTT------
T ss_pred HHHHHhc---CCeEEEeccccCCChhhhhHHHHHHHHHHHHhhhccCCceEE-----EE---------ecCCCC------
Confidence 2333443 4676654221 11 1 11112211 111111222211 11 112344
Q ss_pred CcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHH-HHHHHH-------HH----------HHHhcCC-CCCCceEeec
Q 010613 358 YGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND-LVLDMY-------KS----------VVVTTGK-RDQRFRIEHA 418 (506)
Q Consensus 358 ~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~-~~l~a~-------e~----------~~~~~g~-~~~r~~i~H~ 418 (506)
.++++.++++++.|+++|+++++|+.+..... .+.+.+ ++ .....+. .+.|..++||
T Consensus 183 ----~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~ 258 (427)
T 3v7p_A 183 ----SVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHM 258 (427)
T ss_dssp ----TBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEEC
T ss_pred ----cCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCCCcccCHHHHHhhhcCCCEEEEEC
Confidence 46899999999999999999999998765432 222210 00 0010222 4678999999
Q ss_pred ccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhh
Q 010613 419 QHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSY 497 (506)
Q Consensus 419 ~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~ 497 (506)
++++++++++|++.|+.+++||.++. .+ ..+.+|++++ +|++|++| |++++ .++.++|.+|+.
T Consensus 259 ~~~~~~~~~~l~~~g~~~~~~p~s~~--------~~----~~~~~~~~~~--~Gv~v~lgtD~~~~--~~~~~~~~~~~~ 322 (427)
T 3v7p_A 259 VWANEEEIQTIASYNAHIIHCPISNR--------LL----GNGVLDLEKI--KSIPYAIATDGLSS--NYSLNMYEELKA 322 (427)
T ss_dssp TTCCHHHHHHHHHSEEEEEECHHHHH--------HT----TCCCCCTTTT--TTSCEEECCCCTTS--CSCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCEEEECHHHHH--------Hh----cCCCCCHHHH--CCCeEEEeCCCCCC--CCCCCHHHHHHH
Confidence 99999999999999999999998742 12 2467899999 99999999 98764 245566666544
Q ss_pred H
Q 010613 498 I 498 (506)
Q Consensus 498 ~ 498 (506)
.
T Consensus 323 a 323 (427)
T 3v7p_A 323 A 323 (427)
T ss_dssp H
T ss_pred H
Confidence 3
No 19
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.91 E-value=6.5e-23 Score=215.10 Aligned_cols=306 Identities=17% Similarity=0.181 Sum_probs=190.1
Q ss_pred CCCcccEEEEcCEEEeCCC-C--CceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccc
Q 010613 41 TNLEADLVVTNGVIFTGDD-S--LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (506)
Q Consensus 41 ~~~~~~~ii~n~~I~t~~~-~--~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~ 117 (506)
-..+++++|+|++|++++. . .....+|+|+||||++||+..... .+..++||++|++|+|||||+|+|+.....
T Consensus 5 ~~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~~viD~~G~~v~PGlID~H~H~~~~~~ 81 (439)
T 2i9u_A 5 EKDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDK---YKGNPIIDFRNNIIIPGMNDLHAHASQYKN 81 (439)
T ss_dssp ----CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGG---GTTSCEEEEEEEEEEECEEEEEEEGGGGGG
T ss_pred cCCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEeccccccc---CCCceEEcCCCeEEEecceecccccchHhh
Confidence 3456789999999999862 1 234679999999999999642211 135689999999999999999999875421
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhh-CCCCeEEEEecCCchhhhcHHHH
Q 010613 118 QMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDI-TPHNPVWLSRMDGHMGLANSVAL 196 (506)
Q Consensus 118 ~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~-~~~~Pv~i~~~~~H~~~~Ns~aL 196 (506)
.+. ++ ..+..+|++.. .| .
T Consensus 82 -------~g~--------------------------~~-------~~~~~~~~~~~~~p--------------------~ 101 (439)
T 2i9u_A 82 -------LGI--------------------------GM-------DKELLPWLNNYTFP--------------------E 101 (439)
T ss_dssp -------TTC--------------------------CC-------SSCHHHHHHHTHHH--------------------H
T ss_pred -------hCC--------------------------cC-------CCCHHHHHHhcccc--------------------h
Confidence 110 00 01112222211 00 0
Q ss_pred HHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcc
Q 010613 197 QLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESV 276 (506)
Q Consensus 197 ~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~ 276 (506)
+ ..+ .+.++.......+++++++.|||++.|+.. .
T Consensus 102 ~-------------------------------------~~~--~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~----~-- 136 (439)
T 2i9u_A 102 E-------------------------------------AKF--LNVDYAKKTYGRLIKDLIKNGTTRVALFAT----L-- 136 (439)
T ss_dssp H-------------------------------------HGG--GSHHHHHHHHHHHHHHHHHTTEEEEEEECC----S--
T ss_pred h-------------------------------------hcc--CCHHHHHHHHHHHHHHHHhcCceEEEEccc----c--
Confidence 0 000 155666777778889999999999999752 1
Q ss_pred cCchHHHHHHHHHHHhcCCCeeEEEEc---cCc--c-----ch----hhHHHHHHhcCCcCCCcEEEceEEEeecCCcCc
Q 010613 277 QLSWEDFADVYQWASYSEKMKIRVCLF---FPL--E-----TW----SSLADLINKTGHVLSDWVYLGGVKAFADGSLGS 342 (506)
Q Consensus 277 ~~~~~~~~~~~~~l~~~g~l~~Rv~~~---~~~--~-----~~----~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~ 342 (506)
..+.....++.+.+.| +|+... ... . .. ....++.+.... .. +.+|+.+.
T Consensus 137 --~~~~~~~~~~~~~~~g---~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~i~~~~~----- 200 (439)
T 2i9u_A 137 --HKDSTIELFNMLIKSG---IGAYVGKVNMDYNCPDYLTENYITSLNDTEEIILKYKD-KS-----NIVKPIIT----- 200 (439)
T ss_dssp --CHHHHHHHHHHHHHHT---CEEEEECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTT-TC-----SSEEECBE-----
T ss_pred --ccchHHHHHHHHHHcC---CEEEEEeeeccccCCcccchhHHHHHHHHHHHHHHHhC-CC-----CceEEEEe-----
Confidence 1122223455554434 554321 110 0 00 011122211100 01 12332211
Q ss_pred ccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccc-hHHHHHHHHHH------HHHHhcCCCC-CCce
Q 010613 343 NSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK------SVVVTTGKRD-QRFR 414 (506)
Q Consensus 343 ~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd-~av~~~l~a~e------~~~~~~g~~~-~r~~ 414 (506)
| .+...++.+.++++++.|+++|+++++|+.++ .+++.+++.+. +...+.|..+ .|+.
T Consensus 201 -------~-------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 266 (439)
T 2i9u_A 201 -------P-------RFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTL 266 (439)
T ss_dssp -------E-------CCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEE
T ss_pred -------c-------CCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeE
Confidence 1 11234689999999999999999999999874 45666554321 1234567766 8899
Q ss_pred EeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCc
Q 010613 415 IEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRN 493 (506)
Q Consensus 415 i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~ 493 (506)
++|++++++++++++++.|+.+++||.+.+ +++ .+.+|++++++.|+++++| |+++. ...+++.
T Consensus 267 i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~--------~l~----~~~~~~~~~~~~Gv~~~lgtD~~~~---~~~~~~~ 331 (439)
T 2i9u_A 267 MAHCIHSSKEEINLIKRNNVTIVHCPTSNF--------NLG----SGMMPVRKYLNLGINVVLGSDISAG---HTCSLFK 331 (439)
T ss_dssp EEECCSCCHHHHHHHHHTTCEEEECHHHHH--------HTT----CCCCCHHHHHHTTCEEEECCCBTTB---CCSCHHH
T ss_pred EEEEecCCHHHHHHHHHcCCEEEECccchh--------hcc----cccCCHHHHHHCCCcEEEecCCCCC---CCcCHHH
Confidence 999999999999999999999999998742 122 3578999999999999999 98652 2445665
Q ss_pred chhhHH
Q 010613 494 NFSYIF 499 (506)
Q Consensus 494 ~~~~~~ 499 (506)
+++.++
T Consensus 332 ~~~~~~ 337 (439)
T 2i9u_A 332 VIAYAI 337 (439)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 20
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.90 E-value=3.6e-23 Score=215.50 Aligned_cols=303 Identities=20% Similarity=0.195 Sum_probs=180.6
Q ss_pred ccEEEEcCEEEeCCCC-----CceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDS-----LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~-----~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~ 119 (506)
++++|+|++|+|+++. ....++|+|+||||++||+..+++.. ..+++||++|++|+|||||+|+|+..++..
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~H~~~~~~~- 81 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGP--YPAHWQDMKGKLVTPGLIDCHTHLIFAGSR- 81 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC----CCTTSEECTTCEEEECEEEEEECCCCCSCC-
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhcccc--CCCeEEeCCCCEECCcccccccCcchhhhh-
Confidence 6899999999998753 23578999999999999986543211 145789999999999999999998755421
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 010613 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (506)
Q Consensus 120 ~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~ 199 (506)
..++... +.|.+|. ++.
T Consensus 82 ----------~~~~~~~-------------~~g~~~~------------~~~---------------------------- 98 (416)
T 2q09_A 82 ----------AEEFELR-------------QKGVPYA------------EIA---------------------------- 98 (416)
T ss_dssp ----------HHHHHHH-------------HTTCCHH------------HHH----------------------------
T ss_pred ----------HHHHHHH-------------HhcCCHH------------Hhh----------------------------
Confidence 1111111 1111110 000
Q ss_pred CCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCc
Q 010613 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (506)
Q Consensus 200 gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~ 279 (506)
+.||.+.+ + ....+..+++++....+.+++++++.|||++.|+.. + +...+ .
T Consensus 99 --------~~~g~~~~-----------~------~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~-~-~~~~~-~ 150 (416)
T 2q09_A 99 --------RKGGGIIS-----------T------VRATRAASEDQLFELALPRVKSLIREGVTTVEIKSG-Y-GLTLE-D 150 (416)
T ss_dssp --------HTTCTHHH-----------H------HHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECC-S-CCSHH-H
T ss_pred --------hcCCcEee-----------h------hhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccC-c-ccChH-h
Confidence 00111111 0 011123477888888889999999999999999642 1 11100 0
Q ss_pred hHHHHHHHHHHHhcCCCeeEEEEccC----cc-chh-hHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCC
Q 010613 280 WEDFADVYQWASYSEKMKIRVCLFFP----LE-TWS-SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYAD 353 (506)
Q Consensus 280 ~~~~~~~~~~l~~~g~l~~Rv~~~~~----~~-~~~-~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d 353 (506)
....++.++++.+ ++++|+...+. .. ... ...+.++. +.|+.+ .+++.+||.+
T Consensus 151 ~~~~~~~~~~~~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~---~~~~~~~~~~ 209 (416)
T 2q09_A 151 ELKMLRVARRLGE--ALPIRVKTTLLAAHAVPPEYRDDPDSWVET----------------ICQEII---PAAAEAGLAD 209 (416)
T ss_dssp HHHHHHHHHHHHH--HSSSEEEEEEEEETSCCGGGTTCHHHHHHH----------------HHHTHH---HHHHHTTCCS
T ss_pred HHHHHHHHHHHHh--hCCceEEEeeeccccCCccccCCHHHHHHH----------------HHhhhh---HHHHhccccc
Confidence 0112234444332 35667653211 11 100 00111110 000000 0011112211
Q ss_pred CC-CCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhC
Q 010613 354 EP-HNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ 432 (506)
Q Consensus 354 ~~-~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~l 432 (506)
.. ...+...+++++++++++.|+++|+++++|+.+....+ .++.+. +.| +.+++|+++++++++++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~----~~~~~~-~~g----~~~~~H~~~~~~~~~~~~~~~ 280 (416)
T 2q09_A 210 AVDVFCEHIGFSLAQTEQVYLAADQYGLAVKGHMDQLSNLG----GSTLAA-NFG----ALSVDHLEYLDPEGIQALAHR 280 (416)
T ss_dssp EEEEBBSTTSBCHHHHHHHHHHHHHTTCEEEEEESSSCCCS----HHHHHH-HTT----CSEEEECTTCCHHHHHHHHHH
T ss_pred ccccccCCCcCCHHHHHHHHHHHHHCCCcEEEEECCCCchH----HHHHHH-HcC----CCEEeecccCCHHHHHHHHHc
Confidence 00 01122356899999999999999999999998754211 122221 223 468999999999999999999
Q ss_pred CCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccc
Q 010613 433 GIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLF 482 (506)
Q Consensus 433 gv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a 482 (506)
|+.+++||.+.+. +. ..+.+|++++++.|+++++| |+++
T Consensus 281 g~~~~~~p~~~~~--------~~---~~~~~~~~~~~~~Gv~~~~gtD~~~ 320 (416)
T 2q09_A 281 GVVATLLPTAFYF--------LK---ETKLPPVVALRKAGVPMAVSSDINP 320 (416)
T ss_dssp TCEEEECHHHHHH--------TT---CCCCCCHHHHHHTTCCEEECCCCBT
T ss_pred CCeEEEcCccHHh--------hc---cccccCHHHHHHCCCeEEEecCCCC
Confidence 9999999987532 11 12568999999999999999 9764
No 21
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.90 E-value=2.5e-23 Score=219.59 Aligned_cols=301 Identities=16% Similarity=0.146 Sum_probs=188.3
Q ss_pred EEcCEEEeCCCCCceecEEEE-ECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccccccCCCC
Q 010613 49 VTNGVIFTGDDSLLFADSMAI-KNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGV 127 (506)
Q Consensus 49 i~n~~I~t~~~~~~~~~av~I-~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~l~~~ 127 (506)
+..++++++++ ...+.+|+| +||+|++||+..+. .+++|++| +|+|||||+|+|+.+..+. |.
T Consensus 4 ~~~~~~~~~~~-~~~~~~v~i~~~g~I~~ig~~~~~-------~~~~d~~g-~v~PGfId~H~H~~~~~~r-------g~ 67 (453)
T 3mdu_A 4 IFAERALLPEG-WARNVRFEISADGVLAEIRPDANA-------DGAERLGG-AVLPGMPNLHSHAFQRAMA-------GL 67 (453)
T ss_dssp EEEEEEEETTE-EEEEEEEEECTTSBEEEEESSCCC-------TTSEECSS-CEEECEEEEEECGGGGGGT-------TT
T ss_pred cchhheecCCc-eecCeEEEEecCCEEEEecCCCCc-------ccccccCC-cccccceecccchHHHhhc-------cc
Confidence 44677777764 446789999 89999999986431 23579999 9999999999999765431 11
Q ss_pred CCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCCC
Q 010613 128 SHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSED 207 (506)
Q Consensus 128 ~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~~~~~ 207 (506)
.. .......+..+||+.+
T Consensus 68 ~~----------------------------~~~~~~~~l~~wl~~~---------------------------------- 85 (453)
T 3mdu_A 68 AE----------------------------VAGNPNDSFWTWRELM---------------------------------- 85 (453)
T ss_dssp TC----------------------------CCSSTTCCHHHHHHHH----------------------------------
T ss_pred cc----------------------------cccCCCCcHHHHHHHH----------------------------------
Confidence 00 0000001112223221
Q ss_pred CCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCC---CCcccCchHHHH
Q 010613 208 PNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYP---GESVQLSWEDFA 284 (506)
Q Consensus 208 p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~---g~~~~~~~~~~~ 284 (506)
+.....+++++.....+.++.++++.|+|++.|+...++ |...........
T Consensus 86 --------------------------~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~ 139 (453)
T 3mdu_A 86 --------------------------YRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSL 139 (453)
T ss_dssp --------------------------HHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHH
T ss_pred --------------------------hhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHH
Confidence 111124578888899999999999999999999753211 111111111111
Q ss_pred HHHHHHHhcCCCeeEEEEccC---c----------------cchhhHHHHHHhcCC-cC-CCcEEEceEEEeecCCcCcc
Q 010613 285 DVYQWASYSEKMKIRVCLFFP---L----------------ETWSSLADLINKTGH-VL-SDWVYLGGVKAFADGSLGSN 343 (506)
Q Consensus 285 ~~~~~l~~~g~l~~Rv~~~~~---~----------------~~~~~~~~~~~~~~~-~~-~~~l~~~gvKl~~DG~~~~~ 343 (506)
+..+.+.+. .+|..+... . ...+...+....... .. .+. ++. +
T Consensus 140 ~~~~a~~~~---Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~----------- 203 (453)
T 3mdu_A 140 RISRAASAA---GIGLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH-SLG-L----------- 203 (453)
T ss_dssp HHHHHHHHH---TCEEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC-EEC-E-----------
T ss_pred HHHHHHHHh---CCeEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC-eEE-E-----------
Confidence 334444443 467654211 0 000111111110000 00 011 110 0
Q ss_pred cccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeecc-chHHHHHHHHHH----HHHHhcCCCCCCceEeec
Q 010613 344 SALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIG-DRANDLVLDMYK----SVVVTTGKRDQRFRIEHA 418 (506)
Q Consensus 344 ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~G-d~av~~~l~a~e----~~~~~~g~~~~r~~i~H~ 418 (506)
. | ++...+++++++++++.|+ +|+++++|+.+ +..++.+++.+. +...+.|..+.|++++||
T Consensus 204 --~---p-------~~~~~~~~e~l~~~~~~A~-~g~~v~~H~~e~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~ 270 (453)
T 3mdu_A 204 --C---F-------HSLRAVTPQQIATVLAAGH-DDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHA 270 (453)
T ss_dssp --E---E-------EETTTSCHHHHHHHHTSSC-TTSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEEC
T ss_pred --e---c-------CCCCcCCHHHHHHHHHHHh-cCCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEc
Confidence 0 1 1223579999999999999 99999999864 446666666542 234556788899999999
Q ss_pred ccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhh
Q 010613 419 QHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSY 497 (506)
Q Consensus 419 ~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~ 497 (506)
++++++++++|++.|+.+++||.++. +++ ++.+|+++++++|++|++| |++. +.+|+.+|+.
T Consensus 271 ~~~~~~~i~~la~~g~~v~~~P~sn~--------~lg----~g~~p~~~~~~~Gv~v~lgtD~~~-----~~~~~~~~~~ 333 (453)
T 3mdu_A 271 THADPAEVAAMARSGAVAGLCLSTEA--------NLG----DGIFPATDFLAQGGRLGIGSDSHV-----SLSVVEELRW 333 (453)
T ss_dssp CSCCHHHHHHHHHHTCEEEECHHHHH--------HTT----CCCCCHHHHHHTTCEEEECCBTCS-----CCCHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCEEEECchhHh--------hcC----CCCCCHHHHHHCCCEEEEECCCCC-----CCCHHHHHHH
Confidence 99999999999999999999998742 233 3688999999999999999 9542 4567777666
Q ss_pred HH
Q 010613 498 IF 499 (506)
Q Consensus 498 ~~ 499 (506)
+.
T Consensus 334 ~~ 335 (453)
T 3mdu_A 334 LE 335 (453)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 22
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=99.90 E-value=6.9e-22 Score=204.45 Aligned_cols=292 Identities=14% Similarity=0.135 Sum_probs=173.8
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~ 123 (506)
+.+++|+|++|+++... .+|+|+||||++||+..+. +..++||++|++|+|||||+|+|+...........
T Consensus 4 ~~~~li~n~~v~~~~~~----~~v~I~~g~I~~vg~~~~~-----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~ 74 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV----YDIGIVGDRIIKIEAKIEG-----TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERL 74 (403)
T ss_dssp CEEEEEEEEEETTTTEE----EEEEEETTEEEEEESSCCS-----CEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSS
T ss_pred ccceEEEeeEecCCCee----EEEEEECCEEEEeecCCCC-----CccceEcCCCCEecccceeeeeccchhhccccccc
Confidence 46889999999986531 7999999999999976431 23579999999999999999999874321000000
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 010613 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (506)
Q Consensus 124 l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~ 203 (506)
+.+. + .| |..+
T Consensus 75 ~~~~----------------------------------g-~~------------------------~~~~---------- 85 (403)
T 2qt3_A 75 PKFW----------------------------------S-RP------------------------YTRD---------- 85 (403)
T ss_dssp CTTC----------------------------------S-SC------------------------CCHH----------
T ss_pred cccc----------------------------------C-CC------------------------cccC----------
Confidence 0000 0 00 0000
Q ss_pred CCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHH
Q 010613 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (506)
Q Consensus 204 ~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~ 283 (506)
+-+.+. +.... +. +.+++.......+.++++.|+|++.++....+.... ...+.+
T Consensus 86 -------------------~~l~~~-~~~~~---~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~-~~~~~~ 140 (403)
T 2qt3_A 86 -------------------AAIEDG-LKYYK---NA-THEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKT-KAVEAV 140 (403)
T ss_dssp -------------------HHHHHH-HHHHH---HC-CHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTT-HHHHHH
T ss_pred -------------------cCHHHH-HHHhh---hc-CHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCcccc-chHHHH
Confidence 000000 00000 12 667777778888999999999999765421010000 011222
Q ss_pred HHHHHHHHhcCCCeeEEEEccCc--cchhhHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCccc
Q 010613 284 ADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQ 361 (506)
Q Consensus 284 ~~~~~~l~~~g~l~~Rv~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~ 361 (506)
.++.+++ .+.+.+++..+... ...+...+++++..+...+. ++ | + .|+ +..
T Consensus 141 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~----~-~--------~p~-------~~~ 193 (403)
T 2qt3_A 141 LEAKEEL--KDLIDIQVVAFAQSGFFVDLESESLIRKSLDMGCDL-----VG----G-V--------DPA-------TRE 193 (403)
T ss_dssp HHHHHHH--TTTCEEEEEEECTTCTTTSTTHHHHHHHHHHTTCSE-----EE----C-B--------CTT-------TTT
T ss_pred HHHHHHh--hcceeEEEEEcCCcccccCcchHHHHHHHHhcCCCe-----EE----E-e--------cCC-------CCC
Confidence 2222222 34455555432211 01112222222111111111 11 1 0 121 112
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEeeccchH-HHHHHHHHHHHHHhcCCCCCCceEeecccCCh-------hHHHHHHhCC
Q 010613 362 VMELESLLSMTMASDKSGLQVAIHAIGDRA-NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARFGDQG 433 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~a-v~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~-------~~i~r~a~lg 433 (506)
..++++++++++.|+++|+++++|+.++.. ....++.+-+...+.|. +.|++++||+++++ +++++|+++|
T Consensus 194 ~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g 272 (403)
T 2qt3_A 194 NNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYSINRLAQKTIENGY-KGRVTTSHAWCFADAPSEWLDEAIPLYKDSG 272 (403)
T ss_dssp SCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHHHHHHHTTC-TTSEEEEECTHHHHSCHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHHcCCCeEEEeCCcccchhHHHHHHHHHHHHcCC-CCCeEEEehhhhccCChhhHHHHHHHHHHcC
Confidence 346799999999999999999999997653 22333322222334565 67899999999986 8999999999
Q ss_pred CEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccc
Q 010613 434 IVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLF 482 (506)
Q Consensus 434 v~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a 482 (506)
+.+++||.. ..+..|+++++++|+++++| |++.
T Consensus 273 ~~v~~~p~~----------------~~~~~~~~~~~~~Gv~v~lgtD~~~ 306 (403)
T 2qt3_A 273 MKFVTCFSS----------------TPPTMPVIKLLEAGINLGCASDNIR 306 (403)
T ss_dssp CEEEEETTT----------------CCTTCCHHHHHHTTCEEEEECCSCS
T ss_pred CEEEECCCC----------------CCCCCCHHHHHHcCCcEEEeCCCCC
Confidence 999999953 12567999999999999999 9864
No 23
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=99.90 E-value=7.1e-22 Score=204.85 Aligned_cols=293 Identities=18% Similarity=0.204 Sum_probs=185.1
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~ 123 (506)
+.+++|+|++|++++.......+|+|+||||++||+. . .+..++||++|++|+|||||+|+|+. ...
T Consensus 5 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~-~-----~~~~~viD~~g~~v~PGlID~H~H~~-~~~------ 71 (408)
T 3be7_A 5 SEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI-N-----TKDATVISIPDLILIPGLMDSHVHIV-GND------ 71 (408)
T ss_dssp CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC-C-----CSSSEEEEEEEEEEEECEEEEEECCS-SCC------
T ss_pred cceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC-C-----CCCCeEEECCCCEECcCceeeeEccc-CCC------
Confidence 3578999999999875433348999999999999975 1 13568999999999999999999985 210
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 010613 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (506)
Q Consensus 124 l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~ 203 (506)
. . .| +.+
T Consensus 72 ~----------------------~------~~---------------~~~------------------------------ 78 (408)
T 3be7_A 72 S----------------------K------GE---------------ESI------------------------------ 78 (408)
T ss_dssp C----------------------C------SG---------------GGT------------------------------
T ss_pred C----------------------c------ch---------------hhh------------------------------
Confidence 0 0 00 000
Q ss_pred CCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHH
Q 010613 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (506)
Q Consensus 204 ~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~ 283 (506)
..++++.........+.+++.|||++.|+... . ...
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~---~~~-- 114 (408)
T 3be7_A 79 -----------------------------------ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAA----N---YAD-- 114 (408)
T ss_dssp -----------------------------------TCCTHHHHHHHHHHHHHHHTTTEEEEEECCCS----T---THH--
T ss_pred -----------------------------------cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCc----c---ccC--
Confidence 00222223334457788999999999998621 1 111
Q ss_pred HHHHHHHHhcCCC-eeEEEEccC-c------------------------cchhhHHHHHHhcCCcCCCcEEEceEEEeec
Q 010613 284 ADVYQWASYSEKM-KIRVCLFFP-L------------------------ETWSSLADLINKTGHVLSDWVYLGGVKAFAD 337 (506)
Q Consensus 284 ~~~~~~l~~~g~l-~~Rv~~~~~-~------------------------~~~~~~~~~~~~~~~~~~~~l~~~gvKl~~D 337 (506)
..++++.+.+.. ..|+..... . ...+.+.++........ ...+|++.|
T Consensus 115 -~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~ 188 (408)
T 3be7_A 115 -VSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYG-----ADLIKFCAT 188 (408)
T ss_dssp -HHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTT-----CSEEEEECB
T ss_pred -HHHHHHHHCCCCCCCEEEEccceeeccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcC-----CCEEEEEec
Confidence 234555555543 235543210 0 01111222222111111 134899999
Q ss_pred CCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEee
Q 010613 338 GSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH 417 (506)
Q Consensus 338 G~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H 417 (506)
|.+.+.++ ..|...+++++++++++.|+++|+++++|+.++.+++.++++ | ..+|+|
T Consensus 189 g~~~~~~~-----------~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g----~~~i~H 245 (408)
T 3be7_A 189 GGVMSRNT-----------DVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKA--------G----VDSVEH 245 (408)
T ss_dssp CCSSSSSC-----------CTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------T----CSEEEE
T ss_pred CCcCCCCC-----------CCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------C----CCEEEE
Confidence 98655443 134567899999999999999999999999998877766532 3 358999
Q ss_pred cccCChhHHHHHHhCCCEEEecchhHh-hhhhcCcccccc---ccc-----cccccccchhccccccccc-ccccccccc
Q 010613 418 AQHLASGTAARFGDQGIVASMQVWTTF-WQSIVNPLLIST---DVW-----NFRYTIGPIHIIAVLVSIF-DGLFCYMLV 487 (506)
Q Consensus 418 ~~~i~~~~i~r~a~lgv~~s~~P~~~~-~~~~~~~~~~g~---~~~-----~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~ 487 (506)
|+.++++++++++++|+.++.++.... +........++. ++. ....|++.++++|+++++| |++.. .
T Consensus 246 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~---p 322 (408)
T 3be7_A 246 ASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIF---D 322 (408)
T ss_dssp CTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTB---C
T ss_pred CCCCCHHHHHHHHHCCCEEeeeecHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC---C
Confidence 999999999999999998876654321 111000000110 000 1236889999999999999 98642 1
Q ss_pred CCCCCcchhhH
Q 010613 488 TCRPRNNFSYI 498 (506)
Q Consensus 488 ~~~~~~~~~~~ 498 (506)
..+++.+++.+
T Consensus 323 ~~~~~~~~~~~ 333 (408)
T 3be7_A 323 HGDNAKQFAYM 333 (408)
T ss_dssp TTCGGGHHHHH
T ss_pred CchHHHHHHHH
Confidence 23455555543
No 24
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.89 E-value=1.6e-22 Score=214.59 Aligned_cols=302 Identities=18% Similarity=0.154 Sum_probs=188.6
Q ss_pred cEEEEcCEEEeCCCC------------C-ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccc
Q 010613 46 DLVVTNGVIFTGDDS------------L-LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHF 112 (506)
Q Consensus 46 ~~ii~n~~I~t~~~~------------~-~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~ 112 (506)
.+++.+++|+++... . ....+|+|+||||++||+..+++... +..++||++|++|+|||||+|+|+
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~Hl 82 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAH-PGVEITHIKDRIIVPGFIDGHIHL 82 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHS-TTCEEEEEEEEEEEECEEEEEEEG
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhcccc-CCCeEEeCCCcEEecceecCcccH
Confidence 356779999987641 1 24679999999999999765443211 356899999999999999999998
Q ss_pred cccccccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhc
Q 010613 113 IPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLAN 192 (506)
Q Consensus 113 ~~~g~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~N 192 (506)
.+... .+.. ..+..+||+... |
T Consensus 83 ~~~~~-------~g~~----------------------------------~~~~~~~l~~~~---------------~-- 104 (475)
T 2ood_A 83 PQTRV-------LGAY----------------------------------GEQLLPWLQKSI---------------Y-- 104 (475)
T ss_dssp GGTTC-------TTCC----------------------------------SCCHHHHHHHHT---------------H--
T ss_pred HhHhh-------cCCC----------------------------------CCCHHHHHHHhc---------------c--
Confidence 65421 0000 011122333210 0
Q ss_pred HHHHHHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCC
Q 010613 193 SVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYP 272 (506)
Q Consensus 193 s~aL~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~ 272 (506)
..+ .. ..+.++.....+.+++++++.|+|++.|+...
T Consensus 105 --~~~-------------------------------------~~--~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~-- 141 (475)
T 2ood_A 105 --PEE-------------------------------------IK--YKDRNYAREGVKRFLDALLAAGTTTCQAFTSS-- 141 (475)
T ss_dssp --HHH-------------------------------------GG--GGSHHHHHHHHHHHHHHHHHTTEEEEEEECCS--
T ss_pred --chh-------------------------------------hc--cCCHHHHHHHHHHHHHHHHhcCceEEEEeccc--
Confidence 000 00 01455666777888999999999999997521
Q ss_pred CCcccCchHHHHHHHHHHHhcCCCeeEEEEccCc----------cchh-h---HHHHHHhcCCcCCCcEEEceEEEeecC
Q 010613 273 GESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL----------ETWS-S---LADLINKTGHVLSDWVYLGGVKAFADG 338 (506)
Q Consensus 273 g~~~~~~~~~~~~~~~~l~~~g~l~~Rv~~~~~~----------~~~~-~---~~~~~~~~~~~~~~~l~~~gvKl~~DG 338 (506)
....+....+.+.+.| +|+.+.... +..+ . ..++.+. +.. .+.+|+.++
T Consensus 142 ------~~~~~~~~~~~~~~~g---~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~- 204 (475)
T 2ood_A 142 ------SPVATEELFEEASRRN---MRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQ---YHD----KGRNLYAIT- 204 (475)
T ss_dssp ------SHHHHHHHHHHHHHHT---CCEEECCEECCSSSCTTTCCCHHHHHHHHHHHHHH---HTT----BTTEEEEEE-
T ss_pred ------CchhHHHHHHHHHHcC---CeEEEEeeecccCCCcccccCHHHHHHHHHHHHHH---hcc----CCceEEEEe-
Confidence 1112212233333333 565432111 0000 1 1112111 000 112333221
Q ss_pred CcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHC-CCeEEEeeccchH-HHHHHHH------HHHHHHhcCCCC
Q 010613 339 SLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKS-GLQVAIHAIGDRA-NDLVLDM------YKSVVVTTGKRD 410 (506)
Q Consensus 339 ~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~-g~~v~iHa~Gd~a-v~~~l~a------~e~~~~~~g~~~ 410 (506)
| ++...++++.++++++.|++. |+++++|+.++.+ ++.+++. .-.+.++.|..+
T Consensus 205 -----------~-------~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~ 266 (475)
T 2ood_A 205 -----------P-------RFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVG 266 (475)
T ss_dssp -----------E-------CBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCS
T ss_pred -----------c-------cccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCC
Confidence 1 123467899999999999999 9999999997653 4444332 112334456677
Q ss_pred CCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccc--cccc-ccccccccc
Q 010613 411 QRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVL--VSIF-DGLFCYMLV 487 (506)
Q Consensus 411 ~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~--V~lG-D~~a~~~~~ 487 (506)
.|.+++|++++++++++++++.|+.+++||.+.+ .++ .+.+|++++++.|++ +++| |.++. +
T Consensus 267 ~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~--------~l~----~~~~~~~~~~~~Gv~~~~~lgTD~~~~---~ 331 (475)
T 2ood_A 267 PKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNL--------FLG----SGLFRLGRATDPEHRVKMSFGTDVGGG---N 331 (475)
T ss_dssp TTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHH--------HTT----CCCCCHHHHTCTTSCCEEEECCCBTTB---S
T ss_pred CCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhh--------hcc----cCcCCHHHHHhCCCCCcEEEEccCCCC---C
Confidence 8899999999999999999999999999998642 122 367899999999999 9999 97642 2
Q ss_pred CCCCCcchhhHH
Q 010613 488 TCRPRNNFSYIF 499 (506)
Q Consensus 488 ~~~~~~~~~~~~ 499 (506)
+.+|+.+|+..+
T Consensus 332 ~~~~~~~~~~~~ 343 (475)
T 2ood_A 332 RFSMISVLDDAY 343 (475)
T ss_dssp CCCHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 345666665543
No 25
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.88 E-value=3.8e-22 Score=208.29 Aligned_cols=296 Identities=13% Similarity=0.126 Sum_probs=182.1
Q ss_pred CcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccccc
Q 010613 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (506)
Q Consensus 43 ~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~ 122 (506)
.+++++|+|++|++++.......+|+|+||||++||+..+.+.. .+..++||++ ++|+|||||+|+|+..+...
T Consensus 35 ~~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~-~~~~~viD~~-~~v~PGlID~H~H~~~~~~~---- 108 (420)
T 2imr_A 35 AHTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQ-YPHAAEERAG-AVIAPPPVNAHTHLDMSAYE---- 108 (420)
T ss_dssp -CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHH-CTTCEEEECC-SEESSCCCEEEEESSCCHHH----
T ss_pred ccccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCccccccc-CCCCeeecCC-eEECCCCEecCcCcchhhhh----
Confidence 35678999999999874334567999999999999986543211 1356899999 99999999999998653210
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCC
Q 010613 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (506)
Q Consensus 123 ~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~ 202 (506)
... .+..+|+..... .+.
T Consensus 109 ----------------g~~----------------------~~~~~~~~~~~~--------------------~~~---- 126 (420)
T 2imr_A 109 ----------------FQA----------------------LPYFQWIPEVVI--------------------RGR---- 126 (420)
T ss_dssp ----------------HHH----------------------CHHHHTSHHHHH--------------------HHT----
T ss_pred ----------------hcc----------------------CCHHHHHHHhhh--------------------hhh----
Confidence 000 000011111000 000
Q ss_pred CCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHH
Q 010613 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (506)
Q Consensus 203 ~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~ 282 (506)
...+. ..++.+++.+++.|||++.|+.. . +
T Consensus 127 -----------------------------------~~~~~----~~~~~~~~~~l~~GvTtv~d~~~---------~-~- 156 (420)
T 2imr_A 127 -----------------------------------HLRGV----AAAQAGADTLTRLGAGGVGDIVW---------A-P- 156 (420)
T ss_dssp -----------------------------------TCCHH----HHHHHHHHHHHHTTCCCEEEEEC---------S-H-
T ss_pred -----------------------------------hccCH----HHHHHHHHHHHhcCcEEEEEccC---------C-H-
Confidence 00011 34566788899999999999862 1 1
Q ss_pred HHHHHHHHHhcCCCeeEEEEccCccc--hh----hHHH---HHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCC
Q 010613 283 FADVYQWASYSEKMKIRVCLFFPLET--WS----SLAD---LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYAD 353 (506)
Q Consensus 283 ~~~~~~~l~~~g~l~~Rv~~~~~~~~--~~----~~~~---~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d 353 (506)
+.++... .+.++|+........ .. ...+ +.+....... +.+|+++. |
T Consensus 157 --~~~~~~~--~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~------------~--- 212 (420)
T 2imr_A 157 --EVMDALL--AREDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLER-----PGLRLGLS------------P--- 212 (420)
T ss_dssp --HHHHHHH--TCTTCCEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTCB-----TTEEEEEE------------E---
T ss_pred --HHHHHHH--HhcCcEEEEEeeecCCCchhhHHHHHHHHHHHHHHhcccC-----CceEEEec------------C---
Confidence 2233211 234566654321111 01 1111 1111000001 12343321 1
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHH------------------------------HHH
Q 010613 354 EPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMY------------------------------KSV 402 (506)
Q Consensus 354 ~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~------------------------------e~~ 402 (506)
.+...+++++++++++.|+++|+++++|+.++. .++.+++.+ .+.
T Consensus 213 ----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (420)
T 2imr_A 213 ----HTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRY 288 (420)
T ss_dssp ----CCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHH
T ss_pred ----CcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHH
Confidence 112346899999999999999999999998765 455444421 122
Q ss_pred HHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-ccc
Q 010613 403 VVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGL 481 (506)
Q Consensus 403 ~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~ 481 (506)
..+.|..+.+..++|++++++++++++++.|+.+++||.+.. .++ .+.+|+++++++|+++++| |++
T Consensus 289 ~~~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~~~~~~p~~~~--------~~~----~~~~~l~~~~~~Gv~~~lgtD~~ 356 (420)
T 2imr_A 289 LDELGVLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNH--------HLE----CGTFDWPAFAAAGVEVALGTDSV 356 (420)
T ss_dssp HHHHTCGGGCCEEEECCSCCHHHHHHHHHHTCCEEECHHHHH--------HTT----CCCCCHHHHHHTTCCEEECCCCH
T ss_pred HHHcCCCCCCeEEEecCcCCHHHHHHHHHcCCeEEECHHHHH--------Hhc----cCCCCHHHHHHCCCeEEEECCCC
Confidence 234566677889999999999999999999999999998632 122 3578999999999999999 986
Q ss_pred ccccccCCCCCcchhhH
Q 010613 482 FCYMLVTCRPRNNFSYI 498 (506)
Q Consensus 482 a~~~~~~~~~~~~~~~~ 498 (506)
+++ ...+++.+|+.+
T Consensus 357 ~~~--~~~~~~~~~~~~ 371 (420)
T 2imr_A 357 ASG--ETLNVREEVTFA 371 (420)
T ss_dssp HHH--SCSCTHHHHHHH
T ss_pred ccC--CCCCHHHHHHHH
Confidence 532 234556665554
No 26
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.88 E-value=1e-21 Score=207.24 Aligned_cols=120 Identities=13% Similarity=0.104 Sum_probs=94.5
Q ss_pred cCCCHHHHHHHHHHHHHCCCeEEEeecc-chHHHHHHHHHH----HHHHhcCCCCCCceEeecccCChhHHHHHHhCCCE
Q 010613 361 QVMELESLLSMTMASDKSGLQVAIHAIG-DRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 435 (506)
Q Consensus 361 ~~~s~e~l~~~~~~a~~~g~~v~iHa~G-d~av~~~l~a~e----~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~ 435 (506)
..++++.++++++.|+ |+++++|+.+ +..++.+++.+. +...+.|..+.|+.++||+++++++++++++.|+.
T Consensus 219 ~~~~~~~l~~~~~~a~--g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~ 296 (458)
T 4f0l_A 219 RAVTPDELDSVTQLLP--DAPVHIHVAEQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAI 296 (458)
T ss_dssp TTSCHHHHHHHTTSST--TSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCE
T ss_pred CcCCHHHHHHHHHHhc--CCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCe
Confidence 3578999999999887 9999999984 456666665542 23345677889999999999999999999999999
Q ss_pred EEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhhHH
Q 010613 436 ASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSYIF 499 (506)
Q Consensus 436 ~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~~ 499 (506)
+++||.+.. +++ ++.+|+++++++|++|++| |+. .+.+|+.+|+.+.
T Consensus 297 ~~~~p~s~~--------~l~----~~~~~~~~~~~~Gv~v~lgtD~~-----~~~~~~~~~~~~~ 344 (458)
T 4f0l_A 297 AGLCPVTEA--------NLG----DGTFNATEFAAAGGKFGIGSDSN-----VLIGIGDELRQLE 344 (458)
T ss_dssp EEECHHHHH--------HTT----CCCCCHHHHHHTTCEEEECCBTT-----SSCCHHHHHHHHH
T ss_pred EEECccccc--------ccc----CCCccHHHHHHCCCeEEEECCCC-----CCCCHHHHHHHHH
Confidence 999998742 232 3688999999999999999 942 3556676665543
No 27
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.87 E-value=2.2e-22 Score=208.77 Aligned_cols=280 Identities=19% Similarity=0.141 Sum_probs=175.3
Q ss_pred EEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccccccccCCC
Q 010613 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~~~~~~l~~ 126 (506)
++|+|++|+|+++......+|+|+||||++||+.. +..+ ||++|++|+|||||+|+|+..+... +
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~-------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~-------~ 65 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE-------VKVD-LDLSGKLVMPALFNTHTHAPMTLLR-------G 65 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS-------CCCS-EECTTEEEEECEEEEEECGGGGGGT-------T
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC-------Ccce-ecCCCcEEeecccchhhccchhhhc-------c
Confidence 37899999998754466789999999999999752 2456 9999999999999999998754321 0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCC
Q 010613 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (506)
Q Consensus 127 ~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~~~gi~~~~~ 206 (506)
. + ...|..+|+...
T Consensus 66 ~--------------------------~-------~~~~~~~~~~~~--------------------------------- 79 (406)
T 1p1m_A 66 V--------------------------A-------EDLSFEEWLFSK--------------------------------- 79 (406)
T ss_dssp S--------------------------S-------CSCCHHHHHHTT---------------------------------
T ss_pred c--------------------------c-------CCCCHHHHHHhh---------------------------------
Confidence 0 0 011222222211
Q ss_pred CCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCcccCchHHHHHH
Q 010613 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (506)
Q Consensus 207 ~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~~~~~~~~~~ 286 (506)
.+...+..+.++.....+.+++++++.|+|++.|+.. ..+ .+
T Consensus 80 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~~---~~ 121 (406)
T 1p1m_A 80 --------------------------VLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF---------HEE---WI 121 (406)
T ss_dssp --------------------------HHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES---------SHH---HH
T ss_pred --------------------------hccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh---------CHH---HH
Confidence 0000113467777888888999999999999999862 112 23
Q ss_pred HHHHHhcCCCeeEEEEccCc-----cchhhHHH---HHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCC
Q 010613 287 YQWASYSEKMKIRVCLFFPL-----ETWSSLAD---LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNY 358 (506)
Q Consensus 287 ~~~l~~~g~l~~Rv~~~~~~-----~~~~~~~~---~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~ 358 (506)
++.+.+ .++|+...... ...+.+.+ ..+... +.- +.+|+. ..+..||
T Consensus 122 ~~~~~~---~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~i~~~---------~~~~~~~------- 176 (406)
T 1p1m_A 122 AKAVRD---FGMRALLTRGLVDSNGDDGGRLEENLKLYNEWN---GFE---GRIFVG---------FGPHSPY------- 176 (406)
T ss_dssp HHHHHH---HCCEEEEEEEECCBTTBCTTHHHHHHHHHHHHT---TGG---GTEEEE---------EEECCTT-------
T ss_pred HHHHHH---cCCEEEEEcccccCCCCHHHHHHHHHHHHHHhh---CCC---CcEEEE---------EecCccC-------
Confidence 333333 34676532211 11111221 111100 000 113322 1223344
Q ss_pred cccCCCHHHHHHHHHHHHHCCCeEEEeeccc-hHHHHHHH--HHHHHHHhcCCCCCCceEeecc---cCChhHHHHHHhC
Q 010613 359 GLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLD--MYKSVVVTTGKRDQRFRIEHAQ---HLASGTAARFGDQ 432 (506)
Q Consensus 359 G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd-~av~~~l~--a~e~~~~~~g~~~~r~~i~H~~---~i~~~~i~r~a~l 432 (506)
.+++++++++++.|+++|+++++|+.++ .+++.+++ .+. .++.|..+ ..++|+. +++++++++++
T Consensus 177 ---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g--~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~-- 247 (406)
T 1p1m_A 177 ---LCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIG--LKEVKTIA--AHCVHLPERYFGVLKDIPFFV-- 247 (406)
T ss_dssp ---TSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTT--TTTSCEEE--EECTTCCGGGTTTTTTSSEEE--
T ss_pred ---cCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCC--HhHcCcce--eEeeeccCcccCCHHHHHHHH--
Confidence 3689999999999999999999999865 45555444 111 12233222 6899999 99999988877
Q ss_pred CCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-cccccccccCCCCCcchhh
Q 010613 433 GIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSY 497 (506)
Q Consensus 433 gv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~ 497 (506)
++||...+ +++ .+..|++++++.|+++++| |++.++ ...+++.+++.
T Consensus 248 ----~~~p~~~~--------~~~----~~~~~~~~~~~~Gv~~~lgtD~~~~~--~~~~~~~~~~~ 295 (406)
T 1p1m_A 248 ----SHNPASNL--------KLG----NGIAPVQRMIEHGMKVTLGTDGAASN--NSLNLFFEMRL 295 (406)
T ss_dssp ----EECHHHHH--------HTT----CCCCCHHHHHHTTCEEEECCCCTTTT--SCCCHHHHHHH
T ss_pred ----HhCcHHHh--------hcC----CCcCcHHHHHhCCCeEEEECCCCcCC--CCCCHHHHHHH
Confidence 78897532 232 2568999999999999999 987542 22455555443
No 28
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=99.84 E-value=7.2e-19 Score=184.31 Aligned_cols=301 Identities=16% Similarity=0.205 Sum_probs=179.2
Q ss_pred CCCcccEEEEcCEE-EeCCCCCc--eecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccc
Q 010613 41 TNLEADLVVTNGVI-FTGDDSLL--FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (506)
Q Consensus 41 ~~~~~~~ii~n~~I-~t~~~~~~--~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~ 117 (506)
++.+.+++|+|++| +|+|+... .+++|+|+||||++||+..+++ .+..++||++|++|+|||||+|+|+.+++.
T Consensus 25 ~~~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~---~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~ 101 (479)
T 3hpa_A 25 SSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP---ETADEVLDLRGHLVIPGLVNTHHHMYQSLT 101 (479)
T ss_dssp ----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC---SCCSEEEECTTEEEEECEEECCCCGGGGGS
T ss_pred CCCCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCC---CCCCeEEECCCCEEeeCceeHhhCcchhcc
Confidence 33457899999995 57776543 5679999999999999876654 356799999999999999999999865432
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHH
Q 010613 118 QMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQ 197 (506)
Q Consensus 118 ~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns~aL~ 197 (506)
.+... + ...+...||...
T Consensus 102 -------~g~~~------------------------~-------~~~~~~~~l~~~------------------------ 119 (479)
T 3hpa_A 102 -------RAVPA------------------------A-------QNAELFGWLTNL------------------------ 119 (479)
T ss_dssp -------CSCTT------------------------T-------TTCCHHHHHHHH------------------------
T ss_pred -------ccccc------------------------C-------CCcchHHHHhhh------------------------
Confidence 11100 0 011111222211
Q ss_pred HcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCCCccc
Q 010613 198 LVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQ 277 (506)
Q Consensus 198 ~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g~~~~ 277 (506)
....+....++.......++.++++.|+|++.|...... . .
T Consensus 120 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~--~-~ 160 (479)
T 3hpa_A 120 ------------------------------------YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYP--N-G 160 (479)
T ss_dssp ------------------------------------HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCC--T-T
T ss_pred ------------------------------------hhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeecc--c-h
Confidence 011123355666677788889999999999999763211 1 1
Q ss_pred CchHHHHHHHHHHHhcCCCeeEEEEccC---c--cc-----------hhhH-HHHHHhcCCcCCCcEEEceEEEeecCCc
Q 010613 278 LSWEDFADVYQWASYSEKMKIRVCLFFP---L--ET-----------WSSL-ADLINKTGHVLSDWVYLGGVKAFADGSL 340 (506)
Q Consensus 278 ~~~~~~~~~~~~l~~~g~l~~Rv~~~~~---~--~~-----------~~~~-~~~~~~~~~~~~~~l~~~gvKl~~DG~~ 340 (506)
.... +..+...+.+ +|...... . .. .... .+........ ...+..
T Consensus 161 ~~~~---~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 222 (479)
T 3hpa_A 161 SRLD---DSIGAAQRIG---MRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETY------------HDEGRY 222 (479)
T ss_dssp CCHH---HHHHHHHHHT---CEEEEEEEECC----------------CHHHHHHHHHHHHHH------------CCCSTT
T ss_pred hhHH---HHHHHHHHhc---chhhhhhheeeccccccCCCchhhhhhhhhHHHHHHHHHHHh------------hhhccc
Confidence 1122 2233333323 33222110 0 00 0000 0000000000 000000
Q ss_pred CcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch-HHHHHHHHH----HHHHHhcCCCCCCceE
Q 010613 341 GSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMY----KSVVVTTGKRDQRFRI 415 (506)
Q Consensus 341 ~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av~~~l~a~----e~~~~~~g~~~~r~~i 415 (506)
...... ..| .....++.+.+.+.+..|.+.|+++++|..... .+..+.... .....+.+....+..+
T Consensus 223 ~~~~~~-~~~-------~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 294 (479)
T 3hpa_A 223 AMLRVV-VAP-------CSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWH 294 (479)
T ss_dssp CSEEEE-EEE-------SCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEE
T ss_pred ccceeE-ecc-------cccccCCHHHHHHHHHHHHhcCCeEEeecccchHHHHHHHHHcCCchHHHHhhhcccccccee
Confidence 000000 000 112356889999999999999999999986533 222222111 1223455677889999
Q ss_pred eecccCChhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccccccc-ccccc
Q 010613 416 EHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFC 483 (506)
Q Consensus 416 ~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~ 483 (506)
+|+.++++.+++++++.++.+..+|....+ . ..+..|.+.+++.|+++++| |+.++
T Consensus 295 ~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~----~~~~~~~~~~~~~~~~v~~gtD~~~~ 351 (479)
T 3hpa_A 295 AHCVQLDDAGIGLFARTGTGVAHCPCSNMR--------L----ASGIAPVKKMRLAGVPVGLGVDGSAS 351 (479)
T ss_dssp EECTTCCHHHHHHHHHHTCEEEECHHHHHH--------T----TCCCCCHHHHHHHTCCEEECCCCTTS
T ss_pred eeeEecchhHHHHHHhcCCceeeccccccc--------c----ccCccchhHHHhcCCcEEeecccccc
Confidence 999999999999999999999999986421 1 23678999999999999999 98765
No 29
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.78 E-value=2.1e-19 Score=186.04 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=73.1
Q ss_pred HHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchhHhhhhhcCc
Q 010613 372 TMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFWQSIVNP 451 (506)
Q Consensus 372 ~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~ 451 (506)
+..+.+.|+++.+|+.+...+..+++..++. | .|++++||+..++ ++++++++|+.+++||.+.+..+.
T Consensus 213 l~~~~~~~~~v~iHa~~~~~i~~~~~~~~~~----g---~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~~--- 281 (396)
T 3ooq_A 213 GEMVLRKKIPARMHAHRADDILTAIRIAEEF----G---FNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTKL--- 281 (396)
T ss_dssp HHHHHTTSSCEEEEECSHHHHHHHHHHHHHH----T---CCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCSG---
T ss_pred HHHHHcCCCcEEEEECchhHHHHHHHHHHHc----C---CCEEEecCchHHH-HHHHHHHCCCCEEECcccccccch---
Confidence 3344589999999999888777666655443 3 4789999999875 599999999999999976422111
Q ss_pred cccccccccccccccchhccccccccc-cccc
Q 010613 452 LLISTDVWNFRYTIGPIHIIAVLVSIF-DGLF 482 (506)
Q Consensus 452 ~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a 482 (506)
.+ +..+..|++.++++|++|++| |++.
T Consensus 282 -~~---~~~~~~~~~~l~~~Gv~v~lgtD~~~ 309 (396)
T 3ooq_A 282 -EL---KDLTMETIAKLLKDGVLIALMCDHPV 309 (396)
T ss_dssp -GG---TTCCTTHHHHHHHTTCCEEECCTTTT
T ss_pred -hH---HhhhhHHHHHHHHCCCEEEEEcCCCc
Confidence 11 123678999999999999999 9864
No 30
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=99.77 E-value=3.4e-17 Score=170.36 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEeeccchHHH----------------------HH---HHHHHHHHH---hcCCCCCCc
Q 010613 362 VMELESLLSMTMASDKSGLQVAIHAIGDRAND----------------------LV---LDMYKSVVV---TTGKRDQRF 413 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~----------------------~~---l~a~e~~~~---~~g~~~~r~ 413 (506)
.++.+.++++++.|+++|+++++|+.++.+.+ +. .+.++.+.. ++| .+.|+
T Consensus 151 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~-~g~~~ 229 (426)
T 2z00_A 151 NEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSP-ATPRL 229 (426)
T ss_dssp CCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCS-SCCCE
T ss_pred CCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCccchhcccccCChHHHHHHHHHHHHHHhhcccccc-CCCcE
Confidence 56899999999999999999999999877543 11 122222222 223 35789
Q ss_pred eEeecccCC-hhHHHHHHhCCC--EEEecchhHhhhh-hcCcccccccccccccccc---------chhccccccccc-c
Q 010613 414 RIEHAQHLA-SGTAARFGDQGI--VASMQVWTTFWQS-IVNPLLISTDVWNFRYTIG---------PIHIIAVLVSIF-D 479 (506)
Q Consensus 414 ~i~H~~~i~-~~~i~r~a~lgv--~~s~~P~~~~~~~-~~~~~~~g~~~~~~~~pi~---------~~~~~Gv~V~lG-D 479 (506)
.++|++... .+.++++++.|+ .+++||.+.++.. .+. ..|. +....+|++ ++++.|+.+++| |
T Consensus 230 ~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~--~~~~-~~~~~~plr~~~~~~~l~~~l~~G~~~~lgsD 306 (426)
T 2z00_A 230 HVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALR--TFDP-LFKVAPPLRGEEDREALLEGLLDGTLDAIATD 306 (426)
T ss_dssp EETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGG--GCCG-GGCCSSCCCCHHHHHHHHHHHHHTSSCEECCC
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhh--ccCc-eEEEeCCCCCHHHHHHHHHHHhCCCcEEEecC
Confidence 999998654 467888888875 5667998864321 110 1221 123445666 445599999999 9
Q ss_pred cc
Q 010613 480 GL 481 (506)
Q Consensus 480 ~~ 481 (506)
..
T Consensus 307 ~~ 308 (426)
T 2z00_A 307 HA 308 (426)
T ss_dssp BC
T ss_pred CC
Confidence 63
No 31
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.73 E-value=1.6e-17 Score=177.59 Aligned_cols=267 Identities=22% Similarity=0.284 Sum_probs=169.2
Q ss_pred CCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhh--------hhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQ--------QLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~--------~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
...+|++|+|++|++..+ ....+|.|+||||++||+..+.. ...++.+++||++|++|+|||||+|+|+.
T Consensus 64 ~~~~dllI~n~~vvd~~g--~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~ 141 (570)
T 4ac7_C 64 ENVLDLLLTNALILDYTG--IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFI 141 (570)
T ss_dssp TTBCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred cCCCCEEEECeEEECCCC--cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccC
Confidence 346899999999999653 45679999999999999753210 01134679999999999999999999974
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcH
Q 010613 114 PGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANS 193 (506)
Q Consensus 114 ~~g~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns 193 (506)
..+.
T Consensus 142 ~Pg~---------------------------------------------------------------------------- 145 (570)
T 4ac7_C 142 NPDQ---------------------------------------------------------------------------- 145 (570)
T ss_dssp CTTH----------------------------------------------------------------------------
T ss_pred Ccch----------------------------------------------------------------------------
Confidence 2110
Q ss_pred HHHHHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCC
Q 010613 194 VALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPG 273 (506)
Q Consensus 194 ~aL~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g 273 (506)
.+.+++.|+|++.|.+.. +.
T Consensus 146 -----------------------------------------------------------~~aAl~gGvTTvv~gg~~-p~ 165 (570)
T 4ac7_C 146 -----------------------------------------------------------VDVALANGITTLFGGGTG-PA 165 (570)
T ss_dssp -----------------------------------------------------------HHHHHHTTEEEEEEECSS-SC
T ss_pred -----------------------------------------------------------HHHHHhcCCeEEEecCcC-cc
Confidence 023678899999974421 00
Q ss_pred C-----cccCchHHHHHHHHHHHhcCCCeeEEEEccCc--cchhhHHHHHHhcCCcCCCcEEEceEEEeecCCcCccccc
Q 010613 274 E-----SVQLSWEDFADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSAL 346 (506)
Q Consensus 274 ~-----~~~~~~~~~~~~~~~l~~~g~l~~Rv~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~ 346 (506)
. ........+ +.+ +....+.++++..+... ...+.+.++.+. + +.++|+|.|.
T Consensus 166 ~~~n~~p~~~~~~~l-~~~--l~aa~~~~v~~~~~g~~~~~~l~el~el~~a-G--------a~gfK~~~~~-------- 225 (570)
T 4ac7_C 166 EGSKATTVTPGPWNI-EKM--LKSTEGLPINVGILGKGHGSSIAPIMEQIDA-G--------AAGLKIHEDW-------- 225 (570)
T ss_dssp HHHHHSSCCCHHHHH-HHH--HHHHTTCSSEEEEEEECCCSSHHHHHHHHHH-T--------CCEEEEEGGG--------
T ss_pred cccCCcCcCCcHHHH-HHH--HHHhhhCCeeEEEEeccCCcCHHHHHHHHHc-C--------CCeEeeccCC--------
Confidence 0 000001111 211 12234567776654321 122233333322 1 2356766432
Q ss_pred ccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCC-hhH
Q 010613 347 FHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGT 425 (506)
Q Consensus 347 l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~-~~~ 425 (506)
..+++.+++.++.|++.|+++.+|+.++.+...+.++++.. .+...+++.++|+.... |+.
T Consensus 226 ---------------~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedalea~---~Gr~ih~~HiEgag~~hapd~ 287 (570)
T 4ac7_C 226 ---------------GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAI---NGRVIHSFHVEGAGGGHAPDI 287 (570)
T ss_dssp ---------------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHH---TTCCEEETTTTSTTSSSTTTG
T ss_pred ---------------CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHHHh---CCCcceeEeeeccccccChHH
Confidence 13789999999999999999999999765544444555433 24556677888888776 899
Q ss_pred HHHHHhCCCEEEe-cchhHhhhhh-------------cCcc-----ccccc--cccccccccchhccccccccc-ccccc
Q 010613 426 AARFGDQGIVASM-QVWTTFWQSI-------------VNPL-----LISTD--VWNFRYTIGPIHIIAVLVSIF-DGLFC 483 (506)
Q Consensus 426 i~r~a~lgv~~s~-~P~~~~~~~~-------------~~~~-----~~g~~--~~~~~~pi~~~~~~Gv~V~lG-D~~a~ 483 (506)
+++++++++.++. ||...|..+. .++. .+..+ +.+++++.+.+++.|+.+++| |+++.
T Consensus 288 i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~ 367 (570)
T 4ac7_C 288 MAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAM 367 (570)
T ss_dssp GGGGGSTTEEEBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTS
T ss_pred HHHhccCCccccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhhcccccchhhcCCEEEEECccccc
Confidence 9999999999876 6762111000 0000 00111 123578899999999999999 99864
Q ss_pred c
Q 010613 484 Y 484 (506)
Q Consensus 484 ~ 484 (506)
+
T Consensus 368 ~ 368 (570)
T 4ac7_C 368 G 368 (570)
T ss_dssp S
T ss_pred C
Confidence 3
No 32
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.73 E-value=1.6e-17 Score=177.59 Aligned_cols=267 Identities=22% Similarity=0.284 Sum_probs=169.1
Q ss_pred CCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhh--------hhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQ--------QLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~--------~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
...+|++|+|++|++..+ ....+|.|+||||++||+..+.. ...++.+++||++|++|+|||||+|+|+.
T Consensus 64 ~~~~dllI~n~~vvd~~g--~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~ 141 (570)
T 4ubp_C 64 ENVLDLLLTNALILDYTG--IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFI 141 (570)
T ss_dssp TTBCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred cCCCCEEEECeEEECCCC--cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCC
Confidence 346899999999999653 45679999999999999753210 01134679999999999999999999974
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHcCCCCCeEEEecCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcH
Q 010613 114 PGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANS 193 (506)
Q Consensus 114 ~~g~~~~~~~l~~~~s~~~~~~~l~~~~~~~~~~~wi~g~g~~~~~~~~~~p~~~~Ld~~~~~~Pv~i~~~~~H~~~~Ns 193 (506)
..+.
T Consensus 142 ~Pg~---------------------------------------------------------------------------- 145 (570)
T 4ubp_C 142 NPDQ---------------------------------------------------------------------------- 145 (570)
T ss_dssp CTTH----------------------------------------------------------------------------
T ss_pred Ccch----------------------------------------------------------------------------
Confidence 2110
Q ss_pred HHHHHcCCCCCCCCCCCCeeeeCCCCCcCEeEhhhHHHHhhhhCCCCCHHHHHHHHHHHHHHHHhcCcceEEeCccCCCC
Q 010613 194 VALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPG 273 (506)
Q Consensus 194 ~aL~~~gi~~~~~~p~gg~i~rd~~G~~tG~l~e~a~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~GiTsv~d~~~~~~g 273 (506)
.+.+++.|+|++.|.+.. +.
T Consensus 146 -----------------------------------------------------------~~aAl~gGvTTvv~gg~~-p~ 165 (570)
T 4ubp_C 146 -----------------------------------------------------------VDVALANGITTLFGGGTG-PA 165 (570)
T ss_dssp -----------------------------------------------------------HHHHHHTTEEEEEEECCS-SC
T ss_pred -----------------------------------------------------------HHHHHhcCCeEEEecCcc-cc
Confidence 023678899999974421 00
Q ss_pred C-----cccCchHHHHHHHHHHHhcCCCeeEEEEccCc--cchhhHHHHHHhcCCcCCCcEEEceEEEeecCCcCccccc
Q 010613 274 E-----SVQLSWEDFADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSAL 346 (506)
Q Consensus 274 ~-----~~~~~~~~~~~~~~~l~~~g~l~~Rv~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~ 346 (506)
. ........+ +.+ +....+.++++..+... ...+.+.++.+. + +.++|+|.|.
T Consensus 166 ~~~n~~p~~~~~~~l-~~~--l~aa~~~~v~~~~~g~~~~~~l~el~el~~a-G--------a~gfK~~~~~-------- 225 (570)
T 4ubp_C 166 EGSKATTVTPGPWNI-EKM--LKSTEGLPINVGILGKGHGSSIAPIMEQIDA-G--------AAGLKIHEDW-------- 225 (570)
T ss_dssp HHHHHSSCCCHHHHH-HHH--HHHHTTCSSEEEEEEECCCSSHHHHHHHHHH-T--------CCEEEEEGGG--------
T ss_pred ccCCCcCCCCcHHHH-HHH--HHHhhhCCeeEEEEeccCCcCHHHHHHHHHc-C--------CCeEeeccCC--------
Confidence 0 000001111 211 12234567776654321 122233333322 1 2356766432
Q ss_pred ccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCC-hhH
Q 010613 347 FHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGT 425 (506)
Q Consensus 347 l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~-~~~ 425 (506)
..+++.+++.++.|++.|+++.+|+.++.+...+.++++.. .+...+++.++|+.... |+.
T Consensus 226 ---------------~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedalea~---~Gr~ih~~HiEgag~~hapd~ 287 (570)
T 4ubp_C 226 ---------------GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAI---NGRVIHSFHVEGAGGGHAPDI 287 (570)
T ss_dssp ---------------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHH---TTCCEEETTTTSTTSSSTTTG
T ss_pred ---------------CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHHHh---CCCceeEEEecccccccChHH
Confidence 13789999999999999999999999765544444555433 24556677888888776 899
Q ss_pred HHHHHhCCCEEEe-cchhHhhhhh-------------cCcc-----ccccc--cccccccccchhccccccccc-ccccc
Q 010613 426 AARFGDQGIVASM-QVWTTFWQSI-------------VNPL-----LISTD--VWNFRYTIGPIHIIAVLVSIF-DGLFC 483 (506)
Q Consensus 426 i~r~a~lgv~~s~-~P~~~~~~~~-------------~~~~-----~~g~~--~~~~~~pi~~~~~~Gv~V~lG-D~~a~ 483 (506)
+++++++++.++. ||...|..+. .++. .+..+ +.+++++.+.+++.|+.+++| |+++.
T Consensus 288 i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~ 367 (570)
T 4ubp_C 288 MAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAM 367 (570)
T ss_dssp GGGGGSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTS
T ss_pred HHHhccCCccccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhccccccchhhcCCEEEEECccccc
Confidence 9999999999876 6762111000 0000 00111 123578899999999999999 99864
Q ss_pred c
Q 010613 484 Y 484 (506)
Q Consensus 484 ~ 484 (506)
+
T Consensus 368 ~ 368 (570)
T 4ubp_C 368 G 368 (570)
T ss_dssp S
T ss_pred C
Confidence 3
No 33
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=99.72 E-value=1.1e-16 Score=168.00 Aligned_cols=63 Identities=25% Similarity=0.558 Sum_probs=52.3
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
++++|+|++|++++.. ...+|+|+||||++||+..+. .+..++||++|++|+|||||+|+|+.
T Consensus 2 ~~~li~~~~v~~~~~~--~~~~v~I~~g~I~~ig~~~~~----~~~~~viD~~g~~v~PGlID~H~H~~ 64 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGI--TEADILVKDGKVAAISADTSD----VEASRTIDAGGKFVMPGVVDEHVHII 64 (458)
T ss_dssp EEEEEEEEEEEETTEE--EEEEEEEETTEEEEEESCCTT----CCEEEEEECTTCEEEECEEEEEEECC
T ss_pred ceEEEECcEEECCCCc--eeeeEEEECCEEEEecCCCCC----CCCCeEEeCCCCEEecCEEEeeeccc
Confidence 5789999999998742 567999999999999975321 12357999999999999999999985
No 34
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=99.72 E-value=5.5e-16 Score=163.72 Aligned_cols=62 Identities=26% Similarity=0.487 Sum_probs=52.9
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
|+++|+|++|++.+. ....+|.|+||||++||+..+ .+..++||++|++|+|||||+|+|+.
T Consensus 1 M~~~i~n~~v~~~~~--~~~~~v~i~~g~I~~i~~~~~-----~~~~~viD~~g~~v~PG~ID~H~H~~ 62 (461)
T 3sfw_A 1 MKKWIRNGTVVTASD--TYQADVLIDGEKVVAIGSDLQ-----ATDAEVIDATGYYLLPGGIDPHTHLD 62 (461)
T ss_dssp CEEEEESCEEECSSC--EEECEEEEETTEEEEEESCCC-----CSSCEEEECTTCEEEECEEEEEECTT
T ss_pred CcEEEECeEEECCCC--cEEEEEEEECCEEEEEeCCCC-----CCCCeEEECCCCEEEeeeEEeEeccC
Confidence 468999999999653 456799999999999997642 24678999999999999999999985
No 35
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.72 E-value=1.8e-16 Score=171.13 Aligned_cols=70 Identities=33% Similarity=0.583 Sum_probs=54.8
Q ss_pred CCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhh-------hh-hcCCCeEEEcCCCeeeccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQ-------QL-AADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~-------~~-~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
...+|++|+|++|++..+ ....+|.|+||||++||+..+.. .. ..+.+++||++|++|+|||||+|+|+.
T Consensus 63 ~~~~dllI~n~~Vid~~g--i~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~ 140 (569)
T 1e9y_B 63 KEELDLIITNALIVDYTG--IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFI 140 (569)
T ss_dssp TTCCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETT
T ss_pred cccCCEEEEeeEEECCCC--cEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCC
Confidence 346789999999999653 45679999999999999753210 00 124678999999999999999999973
No 36
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=99.71 E-value=6.4e-17 Score=171.01 Aligned_cols=67 Identities=27% Similarity=0.483 Sum_probs=53.7
Q ss_pred CCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
+.+++++|+|++|++++.......+|+|+||||.+||+..+ .+..++||++|++|+|||||+|+|+.
T Consensus 44 ~~mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~iD~~g~~v~PGlID~H~H~~ 110 (467)
T 1xrt_A 44 RWMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-----VPEAEIIDAKGLIVCPGFIDIHVHLR 110 (467)
T ss_dssp --CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-----CSSEEEEECTTSEEEECEEEEEECCC
T ss_pred cceeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-----CCCCcEEeCCCCEEccCEEEEeeccc
Confidence 34567899999999876433456799999999999997532 13458999999999999999999985
No 37
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.70 E-value=1.5e-15 Score=156.03 Aligned_cols=94 Identities=18% Similarity=0.079 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeec-------cchHHHHHHHHHHHHHHhcCCCCCCceEeeccc----CChhHHHHHHh
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAI-------GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH----LASGTAARFGD 431 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~-------Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~----i~~~~i~r~a~ 431 (506)
++++.++++++.|+++|+++++|+. +...++.+++ .|. + .++||.. +++++++++++
T Consensus 171 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~~~~~--------~G~---~-~i~H~~~~~~~~~~~~~~~~~~ 238 (386)
T 2vun_A 171 KNPEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVIK--------TKP---D-VVSHINGGPTAISVQEVDRIMD 238 (386)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHHH--------HCC---S-EEETTTCSSSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCeEEEecCCccccccCHHHHHHHHH--------cCC---C-EEEEccCCCCCCCHHHHHHHHH
Confidence 4789999999999999999999994 4444433321 243 2 6999999 89999999999
Q ss_pred CCCEEEecchhHhhhhhcCccccccccccccccccchhcccc--ccccc-ccc
Q 010613 432 QGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAV--LVSIF-DGL 481 (506)
Q Consensus 432 lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv--~V~lG-D~~ 481 (506)
.|+.+..++.. +. ......++++++++|+ ++++| |++
T Consensus 239 ~g~~vl~~~~~------------g~-~~~~~~~~~~~~~~g~~d~v~lgTD~p 278 (386)
T 2vun_A 239 ETDFAMEIVQC------------GN-PKIADYVARRAAEKGQLGRVIFGNDAP 278 (386)
T ss_dssp HCCCEEEEESS------------SC-HHHHHHHHHHHHHHTCGGGEEEECCBS
T ss_pred cCCeEEEeccC------------Cc-ccccHHHHHHHHHcCCCceeEEecCCC
Confidence 99987332210 00 0124578999999999 99999 985
No 38
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.69 E-value=1.4e-16 Score=165.86 Aligned_cols=94 Identities=15% Similarity=-0.003 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchH-HHHHHHHHHHHHHhcCCCCCCceEeecccCCh-----------hHHHHHH
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRA-NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-----------GTAARFG 430 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~a-v~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~-----------~~i~r~a 430 (506)
++.+.+++.++.|++.|+++++|+.+..+ .+.+++++ ..+..++||....+ +++.+++
T Consensus 186 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l----------~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~ 255 (417)
T 2ogj_A 186 WGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEIL----------GPGDVVTHCFNGKSGSSIMEDEDLFNLAERCA 255 (417)
T ss_dssp CTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHC----------CTTCEEETTTCCCTTTCTTSCHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHh----------cCCCEEEeccCCCccchhccCHHHHHHHHHHH
Confidence 46778888999999999999999965332 33333332 12369999987554 5899999
Q ss_pred hCCCEEEecchhHhhhhhcCccccccccccccccccchhccc-cccccc-ccc
Q 010613 431 DQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIA-VLVSIF-DGL 481 (506)
Q Consensus 431 ~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~G-v~V~lG-D~~ 481 (506)
+.|+.+.++|... . ....+++.++++| +++++| |++
T Consensus 256 ~~g~~v~~~~~~~---------~------~~~~~~~~~~~~G~~~~~lgtD~~ 293 (417)
T 2ogj_A 256 GEGIRLDIGHGGA---------S------FSFKVAEAAIARGLLPFSISTDLH 293 (417)
T ss_dssp -CCCEEECCBCSS---------S------CCHHHHHHHHHTTCCCSBCCBCBS
T ss_pred hcCcEEEecCCCc---------c------ccchHHHHHHHcCCCceEEEcCCC
Confidence 9999998887531 0 1356889999999 999999 987
No 39
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=99.69 E-value=2.8e-15 Score=158.81 Aligned_cols=63 Identities=29% Similarity=0.568 Sum_probs=52.6
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~ 114 (506)
.+|++|+|++|++++. ....+|.|+||||++||+..+. ..++||++|++|+|||||+|+|+..
T Consensus 22 ~~~~~i~~~~v~~~~~--~~~~~v~i~~g~I~~i~~~~~~------~~~~id~~g~~v~PG~iD~H~H~~~ 84 (473)
T 3e74_A 22 SFDLIIKNGTVILENE--ARVVDIAVKGGKIAAIGQDLGD------AKEVMDASGLVVSPGMVDAHTHISE 84 (473)
T ss_dssp CEEEEEESCEEECSSC--EEECEEEEETTEEEEEESCCCC------EEEEEECTTCEEEECEEEEEECC--
T ss_pred cCCEEEEeeEEECCCC--ceeeeEEEECCEEEEEcCCCCC------CCcEEECCCCEEecCEEEEecccCC
Confidence 3578999999999874 4578999999999999976431 2689999999999999999999863
No 40
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=99.69 E-value=9.6e-16 Score=165.62 Aligned_cols=65 Identities=32% Similarity=0.604 Sum_probs=53.6
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~ 114 (506)
+++++|+|++|++++. ....+|+|+||||++||+..+.. ...++||++|++|+|||||+|+|+.+
T Consensus 2 ~m~~li~n~~vv~~~~--~~~~~v~I~~g~I~~Ig~~~~~~----~~~~viD~~g~~v~PGlID~H~H~~~ 66 (559)
T 2fty_A 2 IYDLIIKNGIICTASD--IYAAEIAVNNGKVQLIAASIDPS----LGSEVIDAEGAFITPGGIDAHVHVDE 66 (559)
T ss_dssp CEEEEEESCEEECSSC--EEECEEEEETTEEEEEESCCCGG----GEEEEEECTTCEEEECEEECCBCCCC
T ss_pred CceEEEECcEEEcCCC--ceeeeEEEECCEEEEecCCCCCC----CCCeEEeCCCCEEEcCEEeeccCcCc
Confidence 3678999999999874 25679999999999999753211 24589999999999999999999864
No 41
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=99.68 E-value=1.8e-15 Score=158.97 Aligned_cols=65 Identities=25% Similarity=0.528 Sum_probs=53.9
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
+++++|+|++|++++.. ...+|.|+||||++||+..... .+..++||++|++|+|||||+|+|+.
T Consensus 5 ~~~~~i~~~~v~~~~~~--~~~~v~i~~g~I~~i~~~~~~~---~~~~~~id~~g~~v~PG~ID~H~H~~ 69 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTT--YRADVAIRNGIVSAITEPGSIS---SDDGPAIDGTGLHLFPGMVDVHVHFN 69 (448)
T ss_dssp CCSEEEEEEEEECSSCE--EEEEEEEETTEEEEEESTTCSC---TTSSCEEECTTCEEEECEEEEEECCC
T ss_pred cccEEEEeeEEECCCCc--eEeEEEEECCEEEEeeCccCCC---CCCCeEEECCCCEEecCEEEeeeccC
Confidence 47899999999998753 6789999999999999731111 24678999999999999999999975
No 42
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=99.66 E-value=9.2e-16 Score=161.17 Aligned_cols=61 Identities=36% Similarity=0.652 Sum_probs=51.0
Q ss_pred EEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
++|+|++|++++. ....+|+|+||||++||+..+. .+..++||++|++|+|||||+|+|+.
T Consensus 2 ~li~n~~vv~~~~--~~~~~v~I~~g~I~~ig~~~~~----~~~~~viD~~G~~v~PGlID~H~H~~ 62 (458)
T 1gkp_A 2 LLIKNGEIITADS--RYKADIYAEGETITRIGQNLEA----PPGTEVIDATGKYVFPGFIDPHVHIY 62 (458)
T ss_dssp EEEESCEEEETTE--EEECEEEESSSBCCEEESCCCC----CTTCEEEECTTSEEEECEEEEEECSS
T ss_pred EEEEeeEEECCCC--ceEeeEEEECCEEEEecCCCCC----CCCCeEEECCCCEEecCEEecccCCC
Confidence 6899999999874 2467999999999999975321 13568999999999999999999985
No 43
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.65 E-value=1.3e-15 Score=156.65 Aligned_cols=62 Identities=31% Similarity=0.494 Sum_probs=51.3
Q ss_pred EEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
++|+|++|++++. .....+|+|+||||++||+..+.+ ...++||++|++|+|||||+|+|+.
T Consensus 2 ~li~~~~v~~~~~-~~~~~~v~I~~g~I~~vg~~~~~~----~~~~viD~~g~~v~PGlID~H~H~~ 63 (382)
T 1yrr_A 2 YALTQGRIFTGHE-FLDDHAVVIADGLIKSVCPVAELP----PEIEQRSLNGAILSPGFIDVQLNGC 63 (382)
T ss_dssp EEEESSEEECSSC-EESSEEEEEETTEEEEEEEGGGSC----TTCCEEECTTCEEEECEEEEEESEE
T ss_pred EEEEeeEEEcCCc-eeeCCEEEEECCEEEEEecCCCCC----ccceeecCCCCEEccCEEEEeeccc
Confidence 5789999999874 334679999999999999764321 3468999999999999999999985
No 44
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.65 E-value=1.8e-15 Score=154.76 Aligned_cols=95 Identities=14% Similarity=0.022 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHHHHH-CCCeEEEeecc-chHHHHHHHHHHHHHHhcCCCCCCceEeecccCCh------------hHHHH
Q 010613 363 MELESLLSMTMASDK-SGLQVAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS------------GTAAR 428 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~-~g~~v~iHa~G-d~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~------------~~i~r 428 (506)
++.+.+++.++.|++ .|+++++|+.. +.+.+++++++++ | ..+.|+....+ +++++
T Consensus 165 ~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~~~-----g-----~~~~H~~~~~~~~~~~~s~~~~~~~~~~ 234 (379)
T 2ics_A 165 NGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEK-----G-----DVLTHCFNGKENGILDQATDKIKDFAWQ 234 (379)
T ss_dssp CTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCT-----T-----CEEESTTCCSTTSSEETTTTEECHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHhhc-----C-----CeeeeccCCCccchhhccCHHHHHHHHH
Confidence 467888999999999 99999999964 3344544444311 2 37888876544 89999
Q ss_pred HHhCCCEEEecchhHhhhhhcCccccccccccccccccchhccc-cccccc-cccc
Q 010613 429 FGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIA-VLVSIF-DGLF 482 (506)
Q Consensus 429 ~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~G-v~V~lG-D~~a 482 (506)
+++.|+.++++|.+. . . +..++++++++| +.+.+| |++.
T Consensus 235 ~~~~g~~~~~~p~~~----~-----~------~~~~~~~~~~~G~~~~~l~TD~~~ 275 (379)
T 2ics_A 235 AYNKGVVFDIGHGTD----S-----F------NFHVAETALREGMKAASISTDIYI 275 (379)
T ss_dssp HHHTTCEEECCCTTT----S-----C------CHHHHHHHHHTTCCCSBCCCCBCH
T ss_pred HHHcCCEEEecCCCC----C-----c------CHHHHHHHHHcCCCcceEeccCcc
Confidence 999999999998642 1 1 335678899999 999999 9763
No 45
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=99.64 E-value=6.9e-15 Score=153.60 Aligned_cols=63 Identities=27% Similarity=0.615 Sum_probs=53.3
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
||++|+|++|+|.. ......+|.|+||||++||+..+ .+..++||++|++|+|||||+|+|+.
T Consensus 1 m~~~i~~~~v~~~~-~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~ 63 (428)
T 3mpg_A 1 MNYLFKNGRYMNEE-GKIVATDLLVQDGKIAKVAENIT-----ADNAEVIDVNGKLIAPGLVDVHVHLR 63 (428)
T ss_dssp CEEEEEEEEEECSS-SCEEEEEEEEESSBEEECCSSCC-----CTTSEEEECTTCEEEECEEEEEECCC
T ss_pred CcEEEEeeEEEeCC-CCeeeeeEEEECCEEEEecCCCC-----CCCCeEEECCCCEEeeCEEEEeeccC
Confidence 57899999999844 34567899999999999997643 24678999999999999999999975
No 46
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=99.64 E-value=1.3e-15 Score=160.05 Aligned_cols=61 Identities=31% Similarity=0.596 Sum_probs=52.0
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
+|++|+|++|++++. ....+|+|+||||++||+..+ +..++||++|++|+|||||+|+|+.
T Consensus 1 ~~~li~n~~v~~~~~--~~~~~v~I~~g~I~~ig~~~~------~~~~viD~~G~~v~PGlID~H~H~~ 61 (457)
T 1nfg_A 1 MDIIIKNGTIVTADG--ISRADLGIKDGKITQIGGALG------PAERTIDAAGRYVFPGGIDVHTHVE 61 (457)
T ss_dssp CCEEEEEEEEEETTE--EEEEEEEEETTEEEEESSCCC------CCSEEEECTTCEEEECEEEEEECCS
T ss_pred CcEEEEeeEEEeCCC--ceeeeEEEECCEEEEecCCCC------CCCeEEeCCCCEEccceEeeccccc
Confidence 368999999999864 356799999999999987421 3568999999999999999999985
No 47
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=99.63 E-value=1.3e-14 Score=154.52 Aligned_cols=65 Identities=26% Similarity=0.506 Sum_probs=53.8
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~ 114 (506)
+++++|+|++|++++. ....+|.|+||||++||+..+. .+..++||++|++|+|||||+|+|+..
T Consensus 25 ~~~~li~n~~v~~~~~--~~~~~V~I~~grI~~Ig~~~~~----~~~~~vID~~G~~v~PGlID~H~H~~~ 89 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDDQ--SFYADIYMEDGLIKQIGENLIV----PGGVKTIEAHSRMVIPGGIDVHTRFQM 89 (501)
T ss_dssp CCCEEEEEEEEECSSC--EEEEEEEEETTEEEEEESSCCC----CSSSCEEECTTCEEEECEEEEEECTTC
T ss_pred cCCEEEEeeEEECCCC--ceEeeEEEECCEEEEeccCCCC----CCCCeEEECCCCEEeeCEEEeeecccc
Confidence 4689999999999874 3467999999999999975321 135689999999999999999999853
No 48
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=99.62 E-value=2.7e-14 Score=151.88 Aligned_cols=61 Identities=33% Similarity=0.576 Sum_probs=52.1
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~ 114 (506)
|+++|+|++|++++.. ...+|.|+||||.+||+..+ ..++||++|++|+|||||+|+|+..
T Consensus 1 m~~~i~~~~v~~~~~~--~~~~v~I~~G~I~~i~~~~~-------~~~viD~~g~~v~PG~ID~H~H~~~ 61 (490)
T 3dc8_A 1 MSTVIKGGTIVTADLT--YKADVKVEGGRIVEIGPNLS-------GAETLDATGCYVMPGGIDPHTHLEM 61 (490)
T ss_dssp -CEEEESCEEECSSCE--EECEEEEETTEEEEEESSCC-------CSEEEECTTCEEEECEEEEEECTTC
T ss_pred CcEEEEccEEECCCCc--eeeeEEEECCEEEEeccCCC-------CCeEEECCCCEEecCEEeeccccCC
Confidence 4789999999998743 56799999999999997532 5689999999999999999999853
No 49
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=99.61 E-value=4.3e-15 Score=156.41 Aligned_cols=67 Identities=22% Similarity=0.368 Sum_probs=53.0
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeC-chhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGN-YSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~-~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
+|+++|+|++|++++. ....+|.|+||||.+||+ ..+... ..+..++||++|++|+|||||+|+|+.
T Consensus 3 ~m~~li~~~~v~~~~~--~~~~~v~i~~g~I~~i~~~~~~~~~-~~~~~~viD~~g~~v~PGlID~H~H~~ 70 (452)
T 2gwn_A 3 AMKILLRNALITNEGK--TFPGSVMIDGAFISRIIEGELPADD-NLSADEVIECSGLRLFPGCIDDQVHFR 70 (452)
T ss_dssp CSEEEEEEEEEEETTE--EEEEEEEEETTEEEEEEESCCCTTC-CTTCSEEEECTTCEEEECEEEEEECCC
T ss_pred cccEEEECeEEECCCc--eeeeeEEEECCEEEEEecCCCcccc-CCCCCeEEeCCCCEEecCEEeeccccC
Confidence 4688999999999763 456789999999999986 322100 013468999999999999999999985
No 50
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=99.57 E-value=7.8e-14 Score=145.59 Aligned_cols=61 Identities=25% Similarity=0.512 Sum_probs=51.7
Q ss_pred EEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
++|+|++|++ . ......+|.|+||||++||+..+. .+..++||++|++|+|||||+|+|+.
T Consensus 2 ~~i~~~~v~~-~-~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~~id~~g~~v~PG~iD~H~H~~ 62 (424)
T 3gri_A 2 KLIKNGKVLQ-N-GELQQADILIDGKVIKQIAPAIEP----SNGVDIIDAKGHFVSPGFVDVHVHLR 62 (424)
T ss_dssp EEEESCEEEE-T-TEEEECEEEEETTEEEEEESCCCC----CSSCEEEECTTCEEEECEEEEEECCC
T ss_pred EEEEeeEEEc-C-CCceeeeEEEECCEEEEecCCCCC----CCCCeEEECCCCEEEeCeEEeeecCC
Confidence 6899999999 3 345678999999999999986432 24678999999999999999999975
No 51
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.53 E-value=3.1e-14 Score=113.32 Aligned_cols=74 Identities=34% Similarity=0.482 Sum_probs=61.2
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQ 118 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~~ 118 (506)
+++++|+|++|++++.......+|+|+||||++||+..+... ..+..+++|++|++|+|||||+|+|+......
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~~ 76 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNS-ATEKTKKIDLKRKRAIPGLNDSHIHVIRGLEH 76 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGG-CCTTCEEEECTTCEEEECCCCTTEEEECCCC-
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcc-cCCCCEEEECCCCEEeeCeEeeeeCCCCcccc
Confidence 468899999999998655567899999999999998755432 23467899999999999999999999876653
No 52
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=99.50 E-value=1.1e-12 Score=140.52 Aligned_cols=64 Identities=27% Similarity=0.569 Sum_probs=53.1
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
+++++|+|++|++.+. ....+|+|+||||++||+..+. ....++||++|++|+|||||+|+|+.
T Consensus 7 ~~~~lI~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~----~~~~~vIDa~G~~v~PGlID~H~H~~ 70 (521)
T 2ftw_A 7 TGTILIKNGTVVNDDR--YFKSDVLVENGIIKEISKNIEP----KEGIKVVDATDKLLLPGGIDTHTHFQ 70 (521)
T ss_dssp CCCEEEESCEEECSSC--EEECEEEEETTEEEEEESCCCC----CSSCCEEECTTCEEEECEEEEEECTT
T ss_pred cCCEEEECcEEECCCC--ceeeeEEEECCEEEEecCCCCC----CCCCeEEECCCCEEecCEEeeecccC
Confidence 4689999999999763 3567999999999999975321 12468999999999999999999985
No 53
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.48 E-value=8.7e-13 Score=140.38 Aligned_cols=68 Identities=31% Similarity=0.518 Sum_probs=55.7
Q ss_pred CcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccc
Q 010613 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (506)
Q Consensus 43 ~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~ 115 (506)
..++++|+|++|++++.......+|+|+||||.+||+..+ .+..++||++|++|+|||||+|+|+.++
T Consensus 19 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~iD~~g~~v~PG~iD~H~H~~~~ 86 (496)
T 1rk6_A 19 TPFDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-----SSARRRIDVAGKVVSPGFIDSHTHDDNY 86 (496)
T ss_dssp -CBSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-----SCBSCEEECTTCEEEECEEESSCCCTTH
T ss_pred CcccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-----CCCCeEEeCCCCEEecCEeeeeecCCcc
Confidence 4568999999999987544567799999999999997532 1346799999999999999999998653
No 54
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.47 E-value=2.6e-13 Score=147.73 Aligned_cols=72 Identities=25% Similarity=0.387 Sum_probs=59.8
Q ss_pred cccCCCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 38 TTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 38 ~~~~~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
.++...++|++|+|++|+++........+|+|+||||++||+.... .++.++||++|++|+|||||+|+|+.
T Consensus 28 ~a~g~~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~----~~~~~vID~~G~~v~PG~ID~H~Hl~ 99 (608)
T 3nqb_A 28 AARGDQRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASR----RDAAQVIDAGGAYVSPGLIDTHMHIE 99 (608)
T ss_dssp HHHTSSCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSC----CCEEEEEECTTSEEEECEEEEEECGG
T ss_pred HHCCCCCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCC----CCCCeEEeCCCCEEecCeEecccCcc
Confidence 4455667899999999999876556677999999999999975311 24678999999999999999999984
No 55
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.46 E-value=2.5e-12 Score=132.47 Aligned_cols=64 Identities=22% Similarity=0.368 Sum_probs=51.8
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcC-CCeeeccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQ-GKVVVPGFIDSHVHFI 113 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~-g~~v~PGfiD~H~H~~ 113 (506)
++++|+|++|++++. .....+|+|+||||++||+..+. . +..++||++ |++|+|||||+|+|+.
T Consensus 3 ~~~li~~~~v~~~~~-~~~~~~v~I~~g~I~~ig~~~~~--~--~~~~viD~~~g~~v~PGlID~H~H~~ 67 (396)
T 2vhl_A 3 ESLLIKDIAIVTENE-VIKNGYVGINDGKISTVSTERPK--E--PYSKEIQAPADSVLLPGMIDIHIHGG 67 (396)
T ss_dssp CCEEEEEEEEECSSC-EEEEEEEEEETTEEEEEESSCCS--S--CCSEEEECCTTCEEEECEEEEEECEE
T ss_pred ccEEEEeeEEEcCCc-cccCceEEEECCEEEEEECCCCC--C--CCCceEcCCCCCEEcCCEEEEeecCC
Confidence 478999999999874 33467999999999999932110 1 246899999 9999999999999985
No 56
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.44 E-value=2.1e-12 Score=129.31 Aligned_cols=67 Identities=24% Similarity=0.418 Sum_probs=55.7
Q ss_pred EEEEcCEEEeCCCCC-ceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccc
Q 010613 47 LVVTNGVIFTGDDSL-LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~-~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g 116 (506)
..|+|++|+|+.... ..+.+|+|+||||++||+..+.. ++++++||++|++|+|||||+|+|+...+
T Consensus 4 ~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~---~~~~~vID~~G~~v~PG~ID~H~H~~~~~ 71 (403)
T 3mtw_A 4 KAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAV---PAGATAVDLPGVTLLPGLIDMHVHLDSLA 71 (403)
T ss_dssp EEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCC---CTTCEEEEEEEEEEEECEEEEEECTTCCT
T ss_pred EEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCC---CCCCEEEECCCCEEEeChheeeeCCcccc
Confidence 579999999987554 35679999999999999865432 35789999999999999999999986543
No 57
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=99.41 E-value=1.3e-11 Score=130.90 Aligned_cols=68 Identities=29% Similarity=0.500 Sum_probs=57.3
Q ss_pred CCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~ 114 (506)
..++|++|+|++|+++++......+|+|+||||++||+... .+..++||++|++|+|||||+|+|+..
T Consensus 4 ~~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~ 71 (480)
T 3gip_A 4 AEKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-----HPARHAWDASGKIVAPGFIDVHGHDDL 71 (480)
T ss_dssp -CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-----SCEEEEEECTTSEEEECEEESSCCCTT
T ss_pred cccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-----CCCCeEEECCCCEEccCEEeccccccc
Confidence 34578999999999987655678899999999999998632 245789999999999999999999853
No 58
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=99.39 E-value=1.1e-11 Score=133.29 Aligned_cols=68 Identities=26% Similarity=0.423 Sum_probs=50.2
Q ss_pred cccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
+++++|+|++|++++. ....+|+|+||||++||+..+.+.-.....++||++|++|+|||||+|+|+.
T Consensus 26 ~~~~lI~ng~Vv~~~~--~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~ 93 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDF--SEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQ 93 (541)
T ss_dssp -CEEEEESCEEECSSC--EEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTT
T ss_pred cCCEEEECcEEEcCCC--ceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCC
Confidence 4689999999999763 3467999999999999975432210001238999999999999999999975
No 59
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.29 E-value=2e-12 Score=129.87 Aligned_cols=70 Identities=26% Similarity=0.471 Sum_probs=58.6
Q ss_pred cccEEEEcCEEEeCCCCCc-eecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeeccccccccccccccc
Q 010613 44 EADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (506)
Q Consensus 44 ~~~~ii~n~~I~t~~~~~~-~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g~ 117 (506)
|.+++|+|++|+|++...+ ...+|+|+||||++||+.... .+++++||++|++|+|||||+|+|+...+.
T Consensus 3 M~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~----~~~~~vID~~G~~v~PGfID~H~H~~~~~~ 73 (426)
T 3mkv_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIK----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEF 73 (426)
T ss_dssp CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSS
T ss_pred cCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCC----CCCCEEEECCCCEEEeChhhhhhCcccccC
Confidence 5688999999999976554 456899999999999986442 257899999999999999999999876543
No 60
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.19 E-value=1.2e-11 Score=133.88 Aligned_cols=79 Identities=28% Similarity=0.410 Sum_probs=62.9
Q ss_pred ccccCCCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhh------hhhhcCCCeEEEcCCCeeecccccccc
Q 010613 37 TTTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAV------QQLAADGTNVLNLQGKVVVPGFIDSHV 110 (506)
Q Consensus 37 ~~~~~~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~------~~~~~~~~~viD~~g~~v~PGfiD~H~ 110 (506)
||.+++...|++|+|++|+|.++ ....+|+|+||||++||+..+. .-..++++++||++|++|+|||||+|+
T Consensus 57 ~~~~~~~~~DlvI~Na~Ivd~~G--i~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~Hv 134 (566)
T 4ep8_C 57 GQMLAADCVDLVLTNALIVDHWG--IVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHI 134 (566)
T ss_dssp CCCCGGGSCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEE
T ss_pred CCCCCCCCCCEEEECcEEECCCC--eEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecc
Confidence 45566678899999999999864 4567999999999999964221 011246889999999999999999999
Q ss_pred ccccccc
Q 010613 111 HFIPGGL 117 (506)
Q Consensus 111 H~~~~g~ 117 (506)
|+..++.
T Consensus 135 H~~~~~~ 141 (566)
T 4ep8_C 135 HWICPQQ 141 (566)
T ss_dssp ECSCTTH
T ss_pred cccCCCc
Confidence 9976553
No 61
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=99.18 E-value=1.2e-10 Score=119.19 Aligned_cols=215 Identities=12% Similarity=0.048 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCcceE---EeCcc--CCCCCcccCchHHHHHHHHHHHhcC--CCeeEEEEccCc-cchhh
Q 010613 240 VSVDERREALLRASNLALSRGVTTV---VDFGR--YYPGESVQLSWEDFADVYQWASYSE--KMKIRVCLFFPL-ETWSS 311 (506)
Q Consensus 240 ~s~~~~~~~~~~~~~~~~~~GiTsv---~d~~~--~~~g~~~~~~~~~~~~~~~~l~~~g--~l~~Rv~~~~~~-~~~~~ 311 (506)
.+.+++....+.+++++.+.|||.+ .|+.. ...|...+...+.+.++++++.++- .+.+|+...+.- .+.+.
T Consensus 108 ~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r~~~~~~ 187 (371)
T 2pgf_A 108 HDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHEAAN 187 (371)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEESSTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCHHH
Confidence 4889999999999999999999986 45421 0011111111111223444433322 344444333211 11112
Q ss_pred HHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccc--
Q 010613 312 LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-- 389 (506)
Q Consensus 312 ~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd-- 389 (506)
..+..+...+ ..+. +.|+-+. | ++ .. ++.++++++.|+++|+++++|+.+.
T Consensus 188 ~~~~~~~a~~-~~~~--vvg~dl~--g-----------~e----------~~-~~~~~~~~~~A~~~gl~~~~HagE~~~ 240 (371)
T 2pgf_A 188 IKASADFCLK-HKAD--FVGFDHG--G-----------HE----------VD-LKEYKEIFDYVRESGVPLSVHAGEDVT 240 (371)
T ss_dssp HHHHHHHHHH-TTTT--EEEEEEE--E-----------SC----------CC-GGGGHHHHHHHHHTTCCBEEEESCCTT
T ss_pred HHHHHHHHHh-CCCC--EEEEecC--C-----------Cc----------cc-HHHHHHHHHHHHHcCCcEEEeeCCCCC
Confidence 2222211101 1111 2222222 1 11 11 5678899999999999999999754
Q ss_pred hHH-HHHHHHHHHHHHhcCCCCCCceEeecccCChhH--HHHHHhCCCEEEecchhHhhhhhcCcccccccccccccccc
Q 010613 390 RAN-DLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT--AARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIG 466 (506)
Q Consensus 390 ~av-~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~--i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~ 466 (506)
... ..+.++++ ..| . .+|.||+.+++++ ++++++.|+.+++||.++.. ++....-...|++
T Consensus 241 ~~~~~~i~~al~----~lg---~-~ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~--------l~~~~~~~~~pi~ 304 (371)
T 2pgf_A 241 LPNLNTLYSAIQ----VLK---V-ERIGHGIRVAESQELIDMVKEKNILLEVCPISNVL--------LKNAKSMDTHPIR 304 (371)
T ss_dssp SSSSHHHHHHHH----TSC---C-SEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHH--------TTSSSCGGGCTHH
T ss_pred CCchHHHHHHHh----ccC---C-CEEecchhccccHHHHHHHHHcCCeEEECcchhHH--------hCCCCccccChHH
Confidence 111 22333332 112 2 3899999998877 99999999999999998532 2210001346999
Q ss_pred chhccccccccc-cccccccccCCCCCcchhhHHH
Q 010613 467 PIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSYIFT 500 (506)
Q Consensus 467 ~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~~~ 500 (506)
+++++||+|++| |+++++. .+.+.+|+.+..
T Consensus 305 ~ll~~Gv~V~lgTD~~~~~~---~~l~~e~~~a~~ 336 (371)
T 2pgf_A 305 QLYDAGVKVSVNSDDPGMFL---TNINDDYEELYT 336 (371)
T ss_dssp HHHHTTCEEEECCBCHHHHT---CCHHHHHHHHHH
T ss_pred HHHHCCCeEEEeCCCCcccC---CCHHHHHHHHHH
Confidence 999999999999 9987543 355555554443
No 62
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=99.12 E-value=9.8e-11 Score=117.40 Aligned_cols=213 Identities=12% Similarity=-0.011 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCcceE---EeCccC-CCCCcccCchHHHHH----HHHHHHhcCCCeeEEEEccC-ccchh
Q 010613 240 VSVDERREALLRASNLALSRGVTTV---VDFGRY-YPGESVQLSWEDFAD----VYQWASYSEKMKIRVCLFFP-LETWS 310 (506)
Q Consensus 240 ~s~~~~~~~~~~~~~~~~~~GiTsv---~d~~~~-~~g~~~~~~~~~~~~----~~~~l~~~g~l~~Rv~~~~~-~~~~~ 310 (506)
.+.+++++.....++++.+.||+.+ .|+... ..| .+.+++++ .+++..++-.+.+|+.+... ..+.+
T Consensus 71 ~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~g----l~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~ 146 (326)
T 3pao_A 71 RTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRG----IPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEE 146 (326)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTT----CCHHHHHHHHHHHHHHHHHHHCCEECCEEEEETTSCHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCC----CCHHHHHHHHHHHHHHHHhhCceEEEEEEEeCCCCCHH
Confidence 3788999999999999999999974 332210 011 12333333 33333322223334332221 11122
Q ss_pred hHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch
Q 010613 311 SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR 390 (506)
Q Consensus 311 ~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~ 390 (506)
...+.++...++. + .+.|+-+. |. + ...+++.+++..+.|++.|+++++|+.+..
T Consensus 147 ~a~~~~~~a~~~~-~--~vvG~dL~--g~----------E----------~~~~~~~~~~~~~~A~~~gl~~~~HagE~~ 201 (326)
T 3pao_A 147 QAQKTLDQALPFR-D--AFIAVGLD--SS----------E----------VGHPPSKFQRVFDRARSEGFLTVAHAGEEG 201 (326)
T ss_dssp HHHHHHHHHGGGG-G--GCSEEEEE--SC----------C----------TTCCGGGGHHHHHHHHHTTCEECEEESSSS
T ss_pred HHHHHHHHHhhcc-c--cceeeCCC--CC----------C----------CCCCHHHHHHHHHHHHHcCCceeeecCCCC
Confidence 2333333222221 1 13333322 21 0 013567888999999999999999997543
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEeecccCC--hhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccch
Q 010613 391 ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPI 468 (506)
Q Consensus 391 av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~--~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~ 468 (506)
....+.++++. .+ ..+|.|++.++ +++++++++.|+.+++||.++.. ++....-+..|++++
T Consensus 202 ~~~~i~~al~~----lg----~~rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~--------l~~~~~~~~hPi~~l 265 (326)
T 3pao_A 202 PPEYIWEALDL----LK----VERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTK--------LCVFDDMSQHTILDM 265 (326)
T ss_dssp CHHHHHHHHHT----TC----CSSEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHH--------TTSSSSGGGCCHHHH
T ss_pred CHHHHHHHHhc----CC----CceeeeeeeecccHHHHHHHHHcCCeEEECchhHHH--------hCCCCCcccChHHHH
Confidence 33333344432 12 23699999998 66999999999999999998532 221000145799999
Q ss_pred hccccccccc-cccccccccCCCCCcchhhHHH
Q 010613 469 HIIAVLVSIF-DGLFCYMLVTCRPRNNFSYIFT 500 (506)
Q Consensus 469 ~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~~~ 500 (506)
+++||+|++| |+|+++.. +.+.++..+..
T Consensus 266 l~~Gv~V~l~TDdp~~~~~---~l~~e~~~a~~ 295 (326)
T 3pao_A 266 LERGVKVTVNSDDPAYFGG---YVTENFHALQQ 295 (326)
T ss_dssp HHHTCCEEECCBSHHHHTC---CHHHHHHHHHH
T ss_pred HHCCCeEEEeCCCcccCCC---CHHHHHHHHHH
Confidence 9999999999 99876432 44455544433
No 63
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=99.05 E-value=6e-10 Score=112.40 Aligned_cols=211 Identities=10% Similarity=0.032 Sum_probs=124.4
Q ss_pred CHHHHHHHHHHHHHHHHhcCcceE---EeCccC-CCCCcccCchHHHHHHHHH----HHhcCCCeeEEEEccC-ccchhh
Q 010613 241 SVDERREALLRASNLALSRGVTTV---VDFGRY-YPGESVQLSWEDFADVYQW----ASYSEKMKIRVCLFFP-LETWSS 311 (506)
Q Consensus 241 s~~~~~~~~~~~~~~~~~~GiTsv---~d~~~~-~~g~~~~~~~~~~~~~~~~----l~~~g~l~~Rv~~~~~-~~~~~~ 311 (506)
+.+++++.....++++.+.||+.+ .++... ..| .+.+++++.+.+ ..++-.+.+|+.+... ..+.+.
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~g----l~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~ 150 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRG----VALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDS 150 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTT----CCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCC----CCHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCCCHHH
Confidence 788999999999999999999975 222110 011 123343343322 2222124455443321 111122
Q ss_pred HHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccchH
Q 010613 312 LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA 391 (506)
Q Consensus 312 ~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~a 391 (506)
..+.++...++ .+. +.|+-+. |. +. ..+++.++++.+.|++.|+++++|+.+...
T Consensus 151 a~~~l~~a~~~-~~~--vvG~dL~--g~----------E~----------~~~~~~~~~~~~~A~~~gl~~~~HagE~~~ 205 (343)
T 3rys_A 151 ALEVLDQLLAM-HAP--IAGIGLD--SA----------EV----------GNPPSKFERLYQRAAEAGLRRIAHAGEEGP 205 (343)
T ss_dssp HHHHHHHHHHT-TCC--CCEEEEE--SC----------CT----------TCCGGGGHHHHHHHHHTTCEEEEEESSSSC
T ss_pred HHHHHHHHHhC-CCC--EEEEecC--Cc----------cc----------CCCHHHHHHHHHHHHHCCCeEEEeeCCCCC
Confidence 22222211112 222 3444332 21 10 135678889999999999999999975433
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEeecccCC--hhHHHHHHhCCCEEEecchhHhhhhhcCccccccccccccccccchh
Q 010613 392 NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIH 469 (506)
Q Consensus 392 v~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~--~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~ 469 (506)
...+.++++. .+ ..+|.|++.+. ++.++++++.|+.+++||.++.. ++.-..-...|+++|+
T Consensus 206 ~~~i~~al~~----lg----~~rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~--------l~~~~~~~~hPi~~ll 269 (343)
T 3rys_A 206 ASYITEALDV----LH----VERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVR--------LRAVDKLADHPLPEML 269 (343)
T ss_dssp HHHHHHHHHT----SC----CSEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHH--------TTSSSCGGGCSHHHHH
T ss_pred HHHHHHHHhc----CC----cceeeeeeeecCChHHHHHHHhcCCCeeEchhHHHH--------hCCCCCcccchHHHHH
Confidence 3344444421 12 24899999996 58999999999999999998532 2210001346999999
Q ss_pred ccccccccc-cccccccccCCCCCcchhhHH
Q 010613 470 IIAVLVSIF-DGLFCYMLVTCRPRNNFSYIF 499 (506)
Q Consensus 470 ~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~~ 499 (506)
++||+|++| |+|+++.. +...++..+.
T Consensus 270 ~~Gv~V~l~TDdp~~~~~---~l~~E~~~a~ 297 (343)
T 3rys_A 270 AIGLNVCVNSDDPAYFGG---YVDDNFEQLV 297 (343)
T ss_dssp HTTCCEEECCBSTTTTTC---CHHHHHHHHH
T ss_pred HCCCeEEEeCCCccccCC---CHHHHHHHHH
Confidence 999999999 99875422 4444444433
No 64
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.04 E-value=1.4e-10 Score=129.76 Aligned_cols=72 Identities=32% Similarity=0.506 Sum_probs=57.5
Q ss_pred CCcccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhh--------hhhhcCCCeEEEcCCCeeeccccccccccc
Q 010613 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAV--------QQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (506)
Q Consensus 42 ~~~~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~--------~~~~~~~~~viD~~g~~v~PGfiD~H~H~~ 113 (506)
....|++|+|++|+|..+ ....+|.|+||||++||..... .-..++++++||++|++|+|||||+|+|+.
T Consensus 334 ~~~~DLVItNA~IVD~tG--i~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~ 411 (840)
T 4gy7_A 334 AISLDTVITNAVIIDYTG--IIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYI 411 (840)
T ss_dssp GGSCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred cccCCEEEeCeEEECCCC--eEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCC
Confidence 346799999999999864 3567999999999999963210 012246789999999999999999999986
Q ss_pred cc
Q 010613 114 PG 115 (506)
Q Consensus 114 ~~ 115 (506)
.+
T Consensus 412 ~P 413 (840)
T 4gy7_A 412 CP 413 (840)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 65
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=99.00 E-value=2.9e-09 Score=108.24 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCC--hhHHHHHHhCCCEEEecchhH
Q 010613 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQVWTT 443 (506)
Q Consensus 366 e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~--~~~i~r~a~lgv~~s~~P~~~ 443 (506)
+.+.++.+.|++.|+++++|+.+......+.++++. .+ ..+|.|++.+. ++.++++++.|+.+++||.++
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~~----lg----~~RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN 263 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDI----LK----TERLGHGYHTLEDQALYNRLRQENMHFEICPWSS 263 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHT----SC----CSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHHc----cC----CceeeeeeeecCCHHHHHHHHhCCcEEEECHHHH
Confidence 678899999999999999999754433344444321 22 23899999995 579999999999999999986
Q ss_pred hhhhhcCccccccccccccccccchhccccccccc-cccccc
Q 010613 444 FWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCY 484 (506)
Q Consensus 444 ~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~ 484 (506)
.. ++.-..-...|+++++++|++|++| |+|+.+
T Consensus 264 ~~--------l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~ 297 (367)
T 3iar_A 264 YL--------TGAWKPDTEHAVIRLKNDQANYSLNTDDPLIF 297 (367)
T ss_dssp HH--------TSSSCTTSCCHHHHHHHTTCCEEECCBSHHHH
T ss_pred HH--------hCCCCCcccChHHHHHHCCCEEEECCCCcccc
Confidence 32 2110001357999999999999999 998754
No 66
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=98.88 E-value=1.8e-09 Score=110.73 Aligned_cols=66 Identities=26% Similarity=0.507 Sum_probs=52.9
Q ss_pred ccEEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccc
Q 010613 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (506)
Q Consensus 45 ~~~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~ 114 (506)
..++|+|++|++++. ....+|+|+||||++||+..+.. ..+..++||++|++|+|||||+|+|+.+
T Consensus 8 ~~~~i~n~~v~~~~~--~~~~~v~i~~g~I~~ig~~~~~~--~~~~~~viD~~g~~v~PG~iD~H~H~~~ 73 (390)
T 1onw_A 8 GFTLLQGAHLYAPED--RGICDVLVANGKIIAVASNIPSD--IVPNCTVVDLSGQILCPGFIDQHVHLIG 73 (390)
T ss_dssp CCEEEESCEEESSSE--EEECEEEEETTEEEEEETTCCTT--SSSSCEEEECTTCEEEECEEEEEECTTC
T ss_pred ceEEEECcEEECCCC--CccceEEEECCEEEEEecCcccC--CCCCCeEEeCCCCEECcCeeEeeECccc
Confidence 357999999999763 35679999999999999753311 1235689999999999999999999854
No 67
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=98.87 E-value=2.2e-09 Score=109.83 Aligned_cols=65 Identities=31% Similarity=0.506 Sum_probs=53.2
Q ss_pred EEEEcCEEEeCCCCCceecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccc
Q 010613 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (506)
Q Consensus 47 ~ii~n~~I~t~~~~~~~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g 116 (506)
++|+|++|++++. .....+|.|+||||.+|++..+.+ +..++||++|++|+|||||.|+|++.+.
T Consensus 5 ~~i~n~~i~~~~~-~~~~~~i~I~dG~I~~i~~~~~~~----~~~~viD~~G~~v~PGfID~HvHg~~G~ 69 (381)
T 3iv8_A 5 YALTNCKIYTGND-VLVKHAVIINGDKIEAVCPIESLP----SEMNVVDLNGANLSPGFIDLQLNGCGGV 69 (381)
T ss_dssp EEEEEEEEECSSC-EESSEEEEEETTEEEEEEEGGGSC----TTCEEEEEEEEEEEECEEEEEECEETTE
T ss_pred EEEEccEEEcCCC-eEeccEEEEECCEEEEEeCCCCCC----CCCeEEECCCCEEccCeEeeeecccCCC
Confidence 5899999999863 334568999999999999764322 4678999999999999999999987543
No 68
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=98.47 E-value=6.3e-06 Score=83.52 Aligned_cols=96 Identities=13% Similarity=0.198 Sum_probs=66.5
Q ss_pred EceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccch--------HHHHHHHHHH
Q 010613 329 LGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR--------ANDLVLDMYK 400 (506)
Q Consensus 329 ~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~--------av~~~l~a~e 400 (506)
+.++|+|..|+.. |.+ .|....+.+.+.+.++.+++.|.++.+|+.... ++..++
T Consensus 112 v~~~Kl~~aga~~---------~s~----~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~~E~~ai~r~~---- 174 (359)
T 3pnu_A 112 IFGIKLYPAGITT---------NSN----GGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYE---- 174 (359)
T ss_dssp CSEEEECBTTSSS---------SCT----TSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGGGTTGGGHHHHH----
T ss_pred hhehhheeCCCcc---------cCc----CCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhHHHHHHHHHHHH----
Confidence 4578999888642 211 234456899999999999999999999986432 233222
Q ss_pred HHHHhcCCCCCCceEeecccCChhHHHHHHh-CCCEEEecchhHhh
Q 010613 401 SVVVTTGKRDQRFRIEHAQHLASGTAARFGD-QGIVASMQVWTTFW 445 (506)
Q Consensus 401 ~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~-lgv~~s~~P~~~~~ 445 (506)
...+++ .+.|..|.|.. +.+.++.+++ ..|++.+||.+.+.
T Consensus 175 ~la~~~--~g~~lhi~HvS--t~~~v~~I~~A~~VtaEv~phhL~l 216 (359)
T 3pnu_A 175 KLAKHF--PRLKIVMEHIT--TKTLCELLKDYENLYATITLHHLII 216 (359)
T ss_dssp HHHHHC--TTSCEEECSCC--SHHHHHHHHHCTTEEEEECSGGGTC
T ss_pred HHHHHc--CCCcEEEEecC--cHHHHHHHHhcCCceEEEechhhEE
Confidence 122222 14577888877 6777888777 68999999998654
No 69
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=98.25 E-value=9.3e-06 Score=82.78 Aligned_cols=203 Identities=13% Similarity=0.070 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCcceEEe---CccC--CCCCcccCchHHHH----HHHHHHHhcCCCeeEEEEccCc-cch
Q 010613 240 VSVDERREALLRASNLALSRGVTTVVD---FGRY--YPGESVQLSWEDFA----DVYQWASYSEKMKIRVCLFFPL-ETW 309 (506)
Q Consensus 240 ~s~~~~~~~~~~~~~~~~~~GiTsv~d---~~~~--~~g~~~~~~~~~~~----~~~~~l~~~g~l~~Rv~~~~~~-~~~ 309 (506)
.+.+++.+.....++++.+-||.-+-= +... ..| .++++++ +.+++..++-.+.+|+.+...- .+.
T Consensus 89 ~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~G----l~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~~~ 164 (380)
T 4gxw_A 89 TRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSG----IPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDP 164 (380)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTSCH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccC----CCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCH
Confidence 478888999999999999999987532 1100 011 1233333 3334333333366665543221 112
Q ss_pred hhHHHHHHhcCCcCCCcEEEceEEEeecCCcCcccccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEeeccc
Q 010613 310 SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD 389 (506)
Q Consensus 310 ~~~~~~~~~~~~~~~~~l~~~gvKl~~DG~~~~~ta~l~~pY~d~~~~~G~~~~s~e~l~~~~~~a~~~g~~v~iHa~Gd 389 (506)
+...+..+...++.++. +.|+- ++|.- . ..+++.+.+..+.|++.|+++.+||-+.
T Consensus 165 e~a~~~~~~a~~~~~~~--VvG~d--L~g~E-----------------~---~~p~~~f~~~f~~ar~~Gl~~t~HAGE~ 220 (380)
T 4gxw_A 165 DEAVAIVDWMKANRADE--VAGIG--IDYRE-----------------N---DRPPELFWKAYRDARAAGFRTTAHAGEF 220 (380)
T ss_dssp HHHHHHHHHHHHTCCTT--BCEEE--EESCC-----------------T---TCCGGGGHHHHHHHHHTTCEEEEEESCT
T ss_pred HHHHHHHHHHHHhCCCC--EEEEe--ecCCC-----------------C---CCCHHHHHHHHHHHHHcCCCeeeecccc
Confidence 22222222111122222 23443 23321 0 1234567888899999999999999642
Q ss_pred h-HHHHHHHHHHHHHHhcCCCCCCceEeecccC--ChhHHHHHHhCCCEEEecchhHhhhhhcCcccccccccccccccc
Q 010613 390 R-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIG 466 (506)
Q Consensus 390 ~-av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i--~~~~i~r~a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~ 466 (506)
. ..+.+.++++. .| -.+|-|+..+ +++.++++++.+|.+.+||.++.....+.... .-..-|++
T Consensus 221 ~~p~~~i~~al~~----lg----a~RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~~v~~~~-----~~~~HP~~ 287 (380)
T 4gxw_A 221 GMPWRNVETAVDL----LH----VDRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQ-----WAERHPMR 287 (380)
T ss_dssp TCCHHHHHHHHHT----SC----CSEEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHHHSCTTT-----HHHHCGGG
T ss_pred CCchHHHHHHHHH----cC----CcccccceeeccChHHHHHHHHhCceeEECCcchhhhccccccc-----ccccChHH
Confidence 2 11222233321 22 2599999988 67789999999999999999864322211000 00124999
Q ss_pred chhccccccccc-ccccc
Q 010613 467 PIHIIAVLVSIF-DGLFC 483 (506)
Q Consensus 467 ~~~~~Gv~V~lG-D~~a~ 483 (506)
.+++.|++|+++ |.++.
T Consensus 288 ~l~~~Gv~vtinTDDp~~ 305 (380)
T 4gxw_A 288 KMPGLGLKIHPNTDDPTL 305 (380)
T ss_dssp GTGGGTCEEEECCBSHHH
T ss_pred HHHHCCCeEEECCCCchh
Confidence 999999999999 98863
No 70
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=98.01 E-value=0.00018 Score=72.54 Aligned_cols=80 Identities=11% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEeeccch-HH-----HH--HHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHh--
Q 010613 362 VMELESLLSMTMASDKSGLQVAIHAIGDR-AN-----DL--VLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD-- 431 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~~v~iHa~Gd~-av-----~~--~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~-- 431 (506)
..+.+.+.++++.+++.|.++.+|+.... .+ +. +-..++....+. .+.|..+.|.. +.+.++.+++
T Consensus 116 ~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la~~--~~~~~hi~Hvs--t~~~~~~i~~ak 191 (347)
T 2z26_A 116 VTSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRL--TALKVVFEHIT--TKDAADYVRDGN 191 (347)
T ss_dssp CSCGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHHHS--TTCCEEECSCC--SHHHHHHHHTSC
T ss_pred cCCHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHHhh--cCCcEEEEECC--cHHHHHHHHHhC
Confidence 34678899999999999999999996221 11 11 111121112222 25677777775 5677777765
Q ss_pred CCCEEEecchhHhh
Q 010613 432 QGIVASMQVWTTFW 445 (506)
Q Consensus 432 lgv~~s~~P~~~~~ 445 (506)
.+|.+.+||.+.+.
T Consensus 192 ~~Vt~e~~ph~L~l 205 (347)
T 2z26_A 192 ERLAATITPQHLMF 205 (347)
T ss_dssp TTEEEEECHHHHHC
T ss_pred CCceEeecchHhee
Confidence 45889999988643
No 71
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=98.01 E-value=1.3e-06 Score=94.89 Aligned_cols=105 Identities=12% Similarity=0.041 Sum_probs=73.9
Q ss_pred HHHHH-CCC---eEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhH--HHHHHhCCCEEEecchhHhhh
Q 010613 373 MASDK-SGL---QVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT--AARFGDQGIVASMQVWTTFWQ 446 (506)
Q Consensus 373 ~~a~~-~g~---~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~--i~r~a~lgv~~s~~P~~~~~~ 446 (506)
..+++ .|+ ++++|+.+....+.+.+++ . + ..+|.||..+.+++ ++++++.|+.+++||.++.
T Consensus 505 n~ar~~~Gl~~i~~t~HaGE~~~~e~l~~al---L---g----~~RIgHGv~l~edp~Li~lla~~~I~vevCP~SN~-- 572 (701)
T 2a3l_A 505 NKLRESKGMTTITLRPHSGEAGDIDHLAATF---L---T----CHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNN-- 572 (701)
T ss_dssp HHHHTTTTCCCCEECCCCSSSSCTHHHHHHH---H---H----CSSCSCCGGGGGCHHHHHHHHHHTCCEEECHHHHT--
T ss_pred HHHHHHcCCCCCCcccccCCCCCHHHHHHHh---c---C----CCeEEEEeecccCHHHHHHHHHcCCcEEECccchh--
Confidence 34554 687 8999997654444444443 1 1 12489999999877 8999999999999999852
Q ss_pred hhcCccccccccccccc--cccchhccccccccc-cccccccccCCCCCcchhhHH
Q 010613 447 SIVNPLLISTDVWNFRY--TIGPIHIIAVLVSIF-DGLFCYMLVTCRPRNNFSYIF 499 (506)
Q Consensus 447 ~~~~~~~~g~~~~~~~~--pi~~~~~~Gv~V~lG-D~~a~~~~~~~~~~~~~~~~~ 499 (506)
++ ..++. |+++|+++|++|+|| |+++.+.....+.+.++..+.
T Consensus 573 ------kl----~~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa 618 (701)
T 2a3l_A 573 ------SL----FLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAA 618 (701)
T ss_dssp ------TT----TCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHH
T ss_pred ------hh----ccCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHH
Confidence 12 23455 999999999999999 999865443334455554433
No 72
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=97.86 E-value=4.8e-06 Score=84.99 Aligned_cols=41 Identities=34% Similarity=0.688 Sum_probs=35.5
Q ss_pred eecEEEEECCEEEEEeCchhhhhhhcCCCeEEEcCCCeeecccccccccccccc
Q 010613 63 FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (506)
Q Consensus 63 ~~~av~I~~g~I~~vg~~~~~~~~~~~~~~viD~~g~~v~PGfiD~H~H~~~~g 116 (506)
...+|+|+||||++||+ . + || +|++|+|||||+|+|+.+++
T Consensus 28 ~~~~V~I~~g~I~~vg~---------~--~-iD-~g~~v~PGlID~H~H~~~~~ 68 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK---------R--E-CI-PRGVLMPGFVDPHIHGVVGA 68 (376)
T ss_dssp EEEEEEEETTEEEEEEE---------C--C-SC-CSSEEEECEEEEEECEETTE
T ss_pred cCceEEEECCEEEEeCC---------C--c-cC-CCCEEccCeEEEeecCCCCC
Confidence 46799999999999985 1 4 89 99999999999999997543
No 73
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=97.82 E-value=3.8e-06 Score=88.42 Aligned_cols=102 Identities=15% Similarity=0.018 Sum_probs=73.3
Q ss_pred HHHHHHHHHH--HHHCCCeEEEeeccch-----HHHHHHHHHHHHHHhcCCCCCCceEeecccCC--hhHHHHHHhCCCE
Q 010613 365 LESLLSMTMA--SDKSGLQVAIHAIGDR-----ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIV 435 (506)
Q Consensus 365 ~e~l~~~~~~--a~~~g~~v~iHa~Gd~-----av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~--~~~i~r~a~lgv~ 435 (506)
++.+.+..+. |++.|+++.+||.+.. ..+.+.+++. .| ..+|.|++.+. |+.++++++.+|.
T Consensus 308 ~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~-----Lg----a~RIgHGv~l~~dp~l~~~l~~~~I~ 378 (508)
T 3lgd_A 308 LHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALM-----LN----TTRIGHGFALSKHPAVRTYSWKKDIP 378 (508)
T ss_dssp TGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHH-----TT----CSSEEECTTGGGCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHh-----cC----CceeeeeEecCccHHHHHHHHhcCCe
Confidence 4456666666 7889999999996421 1233444441 12 34899999996 7899999999999
Q ss_pred EEecchhHhhhhhcCccccccccccccccccchhccccccccc-ccccc
Q 010613 436 ASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFC 483 (506)
Q Consensus 436 ~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~ 483 (506)
+++||.++.. ++.-..-...|++.++++|++|+++ |+|+.
T Consensus 379 levCP~SN~~--------l~~v~~~~~hP~~~ll~~Gv~V~l~TDdp~~ 419 (508)
T 3lgd_A 379 IEVCPISNQV--------LKLVSDLRNHPVATLMATGHPMVISSDDPAM 419 (508)
T ss_dssp EEECHHHHHH--------TTSCSSGGGCTHHHHHHTTCCEEECCBSHHH
T ss_pred EEECcchHHH--------hCCCCCcccChHHHHHHCCCcEEEcCCCccc
Confidence 9999998632 2110001236999999999999999 99874
No 74
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=96.41 E-value=0.055 Score=54.42 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEee-cccCChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH-AQHLASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H-~~~i~~~~i~r~a~lgv~~s~~ 439 (506)
.+..|++.++.+++.|+++.+|+-......+.++.+ ++.|....|..+.| |...+++..+++.++|+.+++-
T Consensus 191 E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL----~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD 263 (360)
T 3tn4_A 191 EKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYL----LEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFD 263 (360)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHH----HHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHH----HHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEc
Confidence 467789999999999999999986422212233333 34566556889999 6777888899999999999874
No 75
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=96.24 E-value=0.041 Score=55.50 Aligned_cols=72 Identities=22% Similarity=0.259 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccc-hHHHHHHHHHHHHHHhcCCCCCCceEeecc-cC-ChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HL-ASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd-~av~~~l~a~e~~~~~~g~~~~r~~i~H~~-~i-~~~~i~r~a~lgv~~s~~ 439 (506)
..+.|++.++.|.+.|++|.+|+.|. .+...+++.++ +.+....+..+.||. .- +.++..++.++|..+++.
T Consensus 188 q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~----e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~ 262 (364)
T 3k2g_A 188 EEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVE----EEGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFD 262 (364)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHH----HTTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHH----HcCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEec
Confidence 45678889999999999999998543 34455566554 334433456778999 45 899999999999999876
No 76
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=95.81 E-value=0.17 Score=50.37 Aligned_cols=72 Identities=13% Similarity=0.211 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeec-cchHHHHHHHHHHHHHHhcCCCCCCceEeecc-cCChhHHHHHHhCCCEEEecc
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQV 440 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~-Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~-~i~~~~i~r~a~lgv~~s~~P 440 (506)
..+.|++.++.|.+.|++|.+|+. |..+.+ .++.++ +.+....+..+.||. .-+.++.+.+.++|..+++.-
T Consensus 171 q~~~f~aq~~lA~~~glPViiH~~~gr~a~~-~~~iL~----~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g 244 (339)
T 3gtx_A 171 EQLFFRAAARVQRETGVPIITHTQEGQQGPQ-QAELLT----SLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDR 244 (339)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECSTTCCHHH-HHHHHH----HTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHCCeEEEeCCCCcCHHH-HHHHHH----HcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEcc
Confidence 467888999999999999999984 333443 455443 445444456788998 578999999999999998754
No 77
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=95.47 E-value=0.24 Score=49.17 Aligned_cols=71 Identities=14% Similarity=0.183 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeecc-chHHHHHHHHHHHHHHhcCCCCCCceEeecc-cCChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~G-d~av~~~l~a~e~~~~~~g~~~~r~~i~H~~-~i~~~~i~r~a~lgv~~s~~ 439 (506)
..+.|++.++.|.+.|++|.+|+-. ..+.+ .++.++ +.+....+..+.||. .-+.++..++.++|..+++.
T Consensus 166 q~~~f~aq~~~A~~~glPViiH~r~g~~a~~-~l~iL~----e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~ 238 (330)
T 3pnz_A 166 EEKTIRAVARAHHETKAPIHSHTEAGTMALE-QIEILK----QENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFD 238 (330)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECGGGCCHHH-HHHHHH----HTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHCCeEEEeCCCCcChHH-HHHHHH----HcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEc
Confidence 4678889999999999999999752 23444 355543 345444466788997 66788899999999999876
No 78
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=95.08 E-value=0.047 Score=52.55 Aligned_cols=105 Identities=12% Similarity=0.042 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeeccc-CChhHHHHHHhCCCEEEecchhH
Q 010613 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFGDQGIVASMQVWTT 443 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~-i~~~~i~r~a~lgv~~s~~P~~~ 443 (506)
.+.+++.++.|++.|++|.+|+...+.....++.+ ++.+....+..+.||.. .+.+.++++++.|+.+++.....
T Consensus 137 ~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~~~l----~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~ 212 (291)
T 1bf6_A 137 EKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALL----QAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK 212 (291)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECGGGCSHHHHHHHH----HHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTC
T ss_pred HHHHHHHHHHHHHHCCeEEEeCCCCCChHHHHHHH----HHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccCcc
Confidence 46788999999999999999984212111333333 33454445678999965 67899999999999998763210
Q ss_pred hhhhhcCccccccccccccccccchhccc--cccccc-cccc
Q 010613 444 FWQSIVNPLLISTDVWNFRYTIGPIHIIA--VLVSIF-DGLF 482 (506)
Q Consensus 444 ~~~~~~~~~~~g~~~~~~~~pi~~~~~~G--v~V~lG-D~~a 482 (506)
. +. .+ . ......++++++.| -++.++ |++.
T Consensus 213 ~--~~-~~--~----~~~~~~~~~~~~~~~~dril~~TD~p~ 245 (291)
T 1bf6_A 213 N--SY-YP--D----EKRIAMLHALRDRGLLNRVMLSMDITR 245 (291)
T ss_dssp T--TT-SC--H----HHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred c--CC-CC--H----HHHHHHHHHHHHhCCCCeEEEcCCCCC
Confidence 0 00 00 0 00112355666766 667889 9875
No 79
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=94.27 E-value=0.17 Score=47.84 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
...+.+++.++.|.+.|++|.+|+-. +...+++.+++ .+....+.. .||...+.++++.+.+.|+.+++++.
T Consensus 108 ~q~~~~~~~~~~a~~~~~pv~iH~~~--~~~~~~~~l~~----~~~p~~~~v-~H~~~~~~~~~~~~~~~g~~~~~sg~ 179 (265)
T 1yix_A 108 RQQESFIHHIQIGRELNKPVIVHTRD--ARADTLAILRE----EKVTDCGGV-LHCFTEDRETAGKLLDLGFYISFSGI 179 (265)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHHHH----TTGGGTCEE-ETTCCSCHHHHHHHHTTTCEEEECGG
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEecC--chHHHHHHHHh----cCCCCCCEE-EEcCCCCHHHHHHHHHCCcEEEECCc
Confidence 34678999999999999999999863 33445554443 222233444 49998899999999999999999864
No 80
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=94.23 E-value=0.41 Score=48.12 Aligned_cols=73 Identities=22% Similarity=0.305 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHC-CCeEEEeeccc-hHHHHHHHHHHHHHHhcCCCCCCceEeecc-c-CChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKS-GLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-H-LASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~-g~~v~iHa~Gd-~av~~~l~a~e~~~~~~g~~~~r~~i~H~~-~-i~~~~i~r~a~lgv~~s~~ 439 (506)
..+.|++.++.|.+. |++|.+|+.++ .+....++.+++ ..+....+..+.||. . -+.++..++.++|..+++.
T Consensus 177 q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e---~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~ 253 (365)
T 3rhg_A 177 EKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLT---EMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFD 253 (365)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTT---TTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHh---ccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEec
Confidence 456788889999999 99999998442 233445554432 214433456788999 4 6889999999999999876
No 81
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=94.22 E-value=0.1 Score=51.82 Aligned_cols=71 Identities=15% Similarity=0.207 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeec--cchHHHHHHHHHHHHHHhcCCCCCCceEeecc-cCChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAI--GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~--Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~-~i~~~~i~r~a~lgv~~s~~ 439 (506)
..+.|++.++.|++.|++|.+|+. |-.+. .+++.++ +.+....+..+.||. ..+.++.+++.++|+.+++.
T Consensus 146 q~~~f~~q~~lA~~~glPv~iH~~~~~r~a~-e~l~iL~----~~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~ 219 (330)
T 2ob3_A 146 QELVLKAAARASLATGVPVTTHTAASQRDGE-QQAAIFE----SEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLD 219 (330)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCGGGTHHH-HHHHHHH----HTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCeEEEECCCCCCCHH-HHHHHHH----HcCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeC
Confidence 345688999999999999999984 44454 4555443 334322344799998 57899999999999999876
No 82
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=93.38 E-value=0.17 Score=49.42 Aligned_cols=71 Identities=10% Similarity=0.138 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeec--cchHHHHHHHHHHHHHHhcCCCCCCceEeeccc-CChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAI--GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~--Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~-i~~~~i~r~a~lgv~~s~~ 439 (506)
..+.+++.++.|++.|+++.+|+. |+.+ ..+++.+ ++.+....+..+.||.. .+.++++++.++|+.++++
T Consensus 149 q~~~~~~~~~lA~~~~~pv~iH~~~~~~~~-~~~~~~l----~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~ 222 (314)
T 2vc7_A 149 VEKVIRAAAIANKETKVPIITHSNAHNNTG-LEQQRIL----TEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLD 222 (314)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCTTTTHH-HHHHHHH----HHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHCCEEEEeCCCcccCh-HHHHHHH----HHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEe
Confidence 346688899999999999999985 2443 3444444 33455445678999987 5789999999999999887
No 83
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=93.30 E-value=0.25 Score=47.21 Aligned_cols=71 Identities=15% Similarity=0.090 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEeeccc---hHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEec--
Q 010613 365 LESLLSMTMASDKSGLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ-- 439 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v~iHa~Gd---~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~-- 439 (506)
.+.|++.++.|.+.|+++.+|+-.. .+.+.+++.+++ .+....+..+.|| +.++.+++.++|..+++.
T Consensus 109 ~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~~~~il~~----~~~~~~~~vi~H~---~~~~a~~~l~~G~yis~~~~ 181 (261)
T 3guw_A 109 IEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILES----LDFPADLAVIDHV---NFETLDMVLETEYWIGLTVQ 181 (261)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHHHH----TTCCTTSEEEESC---CTTTHHHHHTSSSEEEEECC
T ss_pred HHHHHHHHHHHHHhCCeEEEEcCCCcccchHHHHHHHHHH----cCCCCCCEEEEeC---CHHHHHHHHhCCEEEEecCC
Confidence 5678999999999999999998643 455666665543 3443335567899 789999999999999876
Q ss_pred chh
Q 010613 440 VWT 442 (506)
Q Consensus 440 P~~ 442 (506)
|..
T Consensus 182 pg~ 184 (261)
T 3guw_A 182 PGK 184 (261)
T ss_dssp ---
T ss_pred CCc
Confidence 553
No 84
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=93.22 E-value=0.96 Score=45.33 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeecc-chHHHHHHHHHHHHHHhcCCCCCCceEeeccc-CChhHHHHHH-hCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFG-DQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~G-d~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~-i~~~~i~r~a-~lgv~~s~~ 439 (506)
..+.|++.++.|.+.|++|.+|+-- ..+. .+++.+++ .+....+..+.||.- -+.++.+++. ++|..+++.
T Consensus 167 Q~~~f~aq~~~A~e~glPViiH~r~gr~a~-d~l~iL~e----~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~ 240 (363)
T 3ovg_A 167 ELKALEVAARTSILTGCPILVHTQLGTMAL-EVAKHLIG----FGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFD 240 (363)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETTCSHH-HHHHHHHH----HTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCEEEEeCCCCCCHH-HHHHHHHh----cCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEEC
Confidence 4678889999999999999999842 2344 44555543 344344667889994 6677778888 999999876
No 85
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=93.10 E-value=0.6 Score=43.98 Aligned_cols=71 Identities=15% Similarity=0.054 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchh
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWT 442 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~ 442 (506)
..+.+++.++.|.+.|++|.+|+-. +.+.+++.+++ .+. ..+ .+.||..-+.+.++++.+.|+.+++.+..
T Consensus 112 q~~~f~~~~~~a~~~~~Pv~iH~~~--a~~~~~~il~~----~~~-~~~-~i~H~~~g~~~~~~~~~~~g~~i~~~g~~ 182 (259)
T 1zzm_A 112 QQWLLDEQLKLAKRYDLPVILHSRR--THDKLAMHLKR----HDL-PRT-GVVHGFSGSLQQAERFVQLGYKIGVGGTI 182 (259)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEES--CHHHHHHHHHH----HCC-TTC-EEETTCCSCHHHHHHHHHTTCEEEECGGG
T ss_pred HHHHHHHHHHHHHHhCCcEEEEecc--cHHHHHHHHHh----cCC-CCC-EEEEcCCCCHHHHHHHHHCCCEEEECcee
Confidence 4578899999999999999999853 33445555443 332 223 55699887888999999999999987643
No 86
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=89.81 E-value=0.77 Score=43.65 Aligned_cols=72 Identities=18% Similarity=0.145 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
...+.+++.++.|.+.|++|.+|+-. +...+++.+ +++|....+..+ ||.--+.+.++++.+.|+.+++...
T Consensus 117 ~q~~~f~~~~~~a~~~~lPv~iH~~~--~~~~~~~il----~~~p~~~~~~I~-H~~~g~~~~~~~~~~~g~y~~~sg~ 188 (268)
T 1j6o_A 117 VQKRVFVEQIELAGKLNLPLVVHIRD--AYSEAYEIL----RTESLPEKRGVI-HAFSSDYEWAKKFIDLGFLLGIGGP 188 (268)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHH----HHSCCCSSCEEE-TTCCSCHHHHHHHHHHTEEEEECGG
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCc--hHHHHHHHH----HhcCCCCCCEEE-EcCCCCHHHHHHHHHCCCeEEeccc
Confidence 45788999999999999999999852 334444443 445543456666 9988888999999999999988754
No 87
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=89.62 E-value=0.84 Score=44.20 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchh
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWT 442 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~ 442 (506)
..+.|++.++.|.+.|++|.+|+-. +.+.+++.+++. +....+ .+.||..-+.++++++.++|+.+++.+..
T Consensus 112 Q~~~F~~ql~lA~e~~lPv~iH~r~--a~~~~l~il~~~----~~~~~~-~V~H~fsG~~e~a~~~l~~G~yis~~g~i 183 (287)
T 3rcm_A 112 QEKALEAQLTLAAQLRLPVFLHERD--ASERLLAILKDY----RDHLTG-AVVHCFTGEREALFAYLDLDLHIGITGWI 183 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHHHTT----GGGCSC-EEECSCCCCHHHHHHHHHTTCEEEECGGG
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCC--cHHHHHHHHHHc----CCCCCe-EEEEeCCCCHHHHHHHHHCCcEEEECchh
Confidence 4678999999999999999999863 455566655433 221123 56699888999999999999999988643
No 88
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=89.52 E-value=1.2 Score=42.32 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchh
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWT 442 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~ 442 (506)
..+.+++.++.|.+.|++|.+|+-. +...+++.++ ++| ..+..+ ||..-+.+.++++.+.|+.+++.+..
T Consensus 124 q~~~f~~~~~la~~~~lPv~iH~~~--a~~~~~~il~----~~~--~~~~v~-H~~~g~~~~~~~~~~~g~~i~~~g~~ 193 (272)
T 2y1h_A 124 QRQVLIRQIQLAKRLNLPVNVHSRS--AGRPTINLLQ----EQG--AEKVLL-HAFDGRPSVAMEGVRAGYFFSIPPSI 193 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTT--CHHHHHHHHH----HTT--CCSEEE-ETCCSCHHHHHHHHHTTCEEEECGGG
T ss_pred HHHHHHHHHHHHHHhCCcEEEEeCC--cHHHHHHHHH----hCC--CCCEEE-EccCCCHHHHHHHHHCCCEEEECCcc
Confidence 4568899999999999999999852 3344454443 344 234444 99877889999999999999998754
No 89
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=89.31 E-value=1.1 Score=44.29 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHHH-CCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 364 ELESLLSMTMASDK-SGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 364 s~e~l~~~~~~a~~-~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
..+.|++.+++|.+ .+++|.+|+-. |.+.+++.+++ ++....+ .+.||..-+.++++++.++|..+++.+.
T Consensus 152 Q~~~F~~ql~lA~e~~~lPviiH~r~--A~~d~l~iL~~----~~~~~~~-gViH~FsGs~e~a~~~l~lG~yis~~G~ 223 (325)
T 3ipw_A 152 QLSGYRTLSILHQKYPYLPFFFHCRK--SWSDLCQLNKE----LGYNGCK-GVVHCFDGTEEEMNQILNEGWDIGVTGN 223 (325)
T ss_dssp HHHHHHHTHHHHHHCTTCCEEEEEES--CHHHHHHHHHH----TTCTTSC-EEECSCCCCHHHHHHHHHTTCEEEECSG
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEeCc--hHHHHHHHHHh----cCCCCCc-EEEEECCCCHHHHHHHHhcCcEEeeCcc
Confidence 45789999999999 99999999863 45556665543 3322223 5669999999999999999999999875
No 90
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=88.92 E-value=0.87 Score=42.94 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
.+.+++.++.|.+.|++|.+|+-. +...+++.++ +.+....+. +.||..-+.+.++++.++|+.+++...
T Consensus 111 ~~~f~~~l~~a~~~~lpv~iH~~~--a~~~~~~il~----~~~~~~~~~-v~H~~~g~~~~~~~~~~~g~yi~~~g~ 180 (264)
T 1xwy_A 111 ERAFVAQLRIAADLNMPVFMHCRD--AHERFMTLLE----PWLDKLPGA-VLHCFTGTREEMQACVAHGIYIGITGW 180 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHHG----GGGGGSSCE-EECSCCCCHHHHHHHHHTTCEEEECGG
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCC--chHHHHHHHH----hcCCCCCcE-EEEccCCCHHHHHHHHHCCeEEEECcc
Confidence 466899999999999999999853 3444454443 333223344 559977788999999999999998754
No 91
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=88.13 E-value=16 Score=33.86 Aligned_cols=72 Identities=14% Similarity=0.074 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHh-CCCEEEecch
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD-QGIVASMQVW 441 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~-lgv~~s~~P~ 441 (506)
...+.+++.++.|.+.|+++.+|+-. +...+++.+ +++|....+. +.|+..-+.+++.++.+ .|+.++++..
T Consensus 106 ~~~~~~~~~~~~a~~~~~pv~iH~~~--~~~~~~~~l----~~~p~~~~~~-i~H~~~g~~~~~~~~l~~~~~y~~~sg~ 178 (265)
T 2gzx_A 106 VQKEVFRKQIALAKRLKLPIIIHNRE--ATQDCIDIL----LEEHAEEVGG-IMHSFSGSPEIADIVTNKLNFYISLGGP 178 (265)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHH----HHTTGGGTCE-EETTCCSCHHHHHHHHHTSCCEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc--cHHHHHHHH----HhcCCCCCcE-EEEcCCCCHHHHHHHHHHCCceEEecce
Confidence 35678999999999999999999854 233444433 3444223344 56877667777777777 8999988754
No 92
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=87.94 E-value=1.4 Score=41.73 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHCCCeEE-EeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchh
Q 010613 364 ELESLLSMTMASDKSGLQVA-IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWT 442 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~-iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~ 442 (506)
..+.|++.++.|.+.++||. +|+-. |.+.+++.+++. +. ....+.||..-+.++++++.++|..+++.+..
T Consensus 102 Q~~~F~~ql~lA~e~~lPviSiH~r~--a~~~~~~il~~~----~~--~~~~v~H~fsG~~e~a~~~l~~G~yis~~g~~ 173 (254)
T 3gg7_A 102 QFAVFQHILRRCEDHGGRILSIHSRR--AESEVLNCLEAN----PR--SGTPILHWYSGSVTELRRAISLGCWFSVGPTM 173 (254)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHHHC----GG--GEEEEEETCCSCHHHHHHHHHTTCEEEECHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcCC--cHHHHHHHHHHc----CC--CCcEEEEeCCCCHHHHHHHHcCCcEEEECccc
Confidence 46789999999999999997 99863 455666665543 21 11247799988999999999999999998754
No 93
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=87.60 E-value=1.3 Score=42.96 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
..+.+++.++.|.+.|++|.+|+-. +.+.+++.+++ .+. ..+..+.||..-+.+.++++.++|+.+++...
T Consensus 125 Q~~~f~~ql~lA~~~~lPv~iH~r~--a~~~~~~il~~----~~~-~~~~~i~H~f~g~~~~~~~~l~~g~yi~~~g~ 195 (301)
T 2xio_A 125 QLKYFEKQFELSEQTKLPMFLHCRN--SHAEFLDITKR----NRD-RCVGGVVHSFDGTKEAAAALIDLDLYIGFNGC 195 (301)
T ss_dssp HHHHHHHTHHHHHHHCCCEEEEEES--CHHHHHHHHHH----TGG-GSSCEEETTCCCCHHHHHHHHHTTCEEEECGG
T ss_pred HHHHHHHHHHHHHHhCCcEEEEecC--chHHHHHHHHh----ccC-CCCcEEEEccCCCHHHHHHHHhcCcEEEEccc
Confidence 3578899999999999999999842 44555555544 221 12346899988889999999999999998754
No 94
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=78.29 E-value=4.7 Score=40.81 Aligned_cols=76 Identities=12% Similarity=0.005 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHC----CCeEEEeeccchHHHHHHHHHHHHHHhc---------------------CCCCCCceEeec
Q 010613 364 ELESLLSMTMASDKS----GLQVAIHAIGDRANDLVLDMYKSVVVTT---------------------GKRDQRFRIEHA 418 (506)
Q Consensus 364 s~e~l~~~~~~a~~~----g~~v~iHa~Gd~av~~~l~a~e~~~~~~---------------------g~~~~r~~i~H~ 418 (506)
..+.|++.+++|.+. +++|.+|+-. |.+.+++.+++..... .....+-.+.||
T Consensus 177 Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~--A~~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~H~ 254 (401)
T 3e2v_A 177 QKVFFEEQLKISCLNDKLSSYPLFLHMRS--ACDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVHS 254 (401)
T ss_dssp HHHHHHHHHHHTTSSHHHHTSCEEEEEES--CHHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCEEECS
T ss_pred HHHHHHHHHHHHHhhhccCCCeEEEEecc--hHHHHHHHHHHhhccccccccccccccccccccccccccCCCCcEEEEc
Confidence 457888999999999 9999999864 5667777776653310 001123478999
Q ss_pred ccCChhHHHHHHhCC--CEEEecch
Q 010613 419 QHLASGTAARFGDQG--IVASMQVW 441 (506)
Q Consensus 419 ~~i~~~~i~r~a~lg--v~~s~~P~ 441 (506)
..-+.++++++-++| ..+++...
T Consensus 255 FsGs~e~a~~~l~lG~~~yis~~g~ 279 (401)
T 3e2v_A 255 FTGSAIDLQKLLNLSPNIFIGVNGC 279 (401)
T ss_dssp CCCCHHHHHHHHHHCTTEEEEECGG
T ss_pred CCCCHHHHHHHHhCCCCEEEEeCCE
Confidence 999999999999999 99999875
No 95
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=70.71 E-value=8.3 Score=36.89 Aligned_cols=68 Identities=10% Similarity=0.001 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCCh---------hHHHHHHhC-C
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS---------GTAARFGDQ-G 433 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~---------~~i~r~a~l-g 433 (506)
..+.+...++.|.++|+++.+|+-. .. +..+.+..++.| .+..+.|+..... +++.++++. |
T Consensus 135 ~~~~~~~~~~~a~~~glpv~iH~~~-~~----l~~~~~~l~~~p---~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~~n 206 (294)
T 4i6k_A 135 NTPDWQKFLRNVESLNWQVELHAPP-KY----LVQLLPQLNEYS---FDVVIDHFGRVDPVKGIEDPDYQKFLSLLNVKQ 206 (294)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEECCH-HH----HHHHHHHHTTSS---SCEEESGGGCCCTTTCTTCHHHHHHHHHCCTTT
T ss_pred ccHHHHHHHHHHHHcCCEEEEeeCc-ch----HHHHHHHHHHCC---CCEEEECCCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence 4588999999999999999999853 22 233344445554 4789999987532 334444444 7
Q ss_pred CEEEec
Q 010613 434 IVASMQ 439 (506)
Q Consensus 434 v~~s~~ 439 (506)
+.+.++
T Consensus 207 v~~k~S 212 (294)
T 4i6k_A 207 HWIKVS 212 (294)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 777764
No 96
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=69.20 E-value=1.6 Score=43.76 Aligned_cols=63 Identities=16% Similarity=0.117 Sum_probs=38.3
Q ss_pred HHHHHHHHCCCeEEE-eeccchHHHHHHHHHHHHH--------HhcCC--C----------CCCc---eEeecccCChhH
Q 010613 370 SMTMASDKSGLQVAI-HAIGDRANDLVLDMYKSVV--------VTTGK--R----------DQRF---RIEHAQHLASGT 425 (506)
Q Consensus 370 ~~~~~a~~~g~~v~i-Ha~Gd~av~~~l~a~e~~~--------~~~g~--~----------~~r~---~i~H~~~i~~~~ 425 (506)
+.++.|++.|+++++ |+.+. .+++.++.++-. ...+. + ..+. .+.|+.+++|++
T Consensus 172 ~~i~~A~~~g~~v~igH~~~~--~~~i~~a~~~G~~~itH~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~p~~ 249 (376)
T 1o12_A 172 ELLLRLVKRDIVLSAGHSIAT--FEEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREM 249 (376)
T ss_dssp GGGGGGGGGTCEEEECSBCCC--HHHHHHHHTTTCCEESSTTTTBCCCCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHH
T ss_pred HHHHHHHHCCCEEEeecCccC--HHHHHHHHHCCCCeEEecccCcCChhhcccchhhhhhcCCcceEEEeCCCcCcCHHH
Confidence 467788999999999 98653 222222222200 00011 0 0232 468999999999
Q ss_pred HHHHHhC-CC
Q 010613 426 AARFGDQ-GI 434 (506)
Q Consensus 426 i~r~a~l-gv 434 (506)
++++.+. |.
T Consensus 250 ~~~~~~~~g~ 259 (376)
T 1o12_A 250 VKLVYKVKKA 259 (376)
T ss_dssp HHHHHHHHTG
T ss_pred HHHHHhhCCC
Confidence 9999877 55
No 97
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=64.01 E-value=0.99 Score=46.36 Aligned_cols=97 Identities=13% Similarity=0.012 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHHHHCCCeEEE-eeccchHHHHHHHHHHHHHHhcCCCCCCceEe---ecccCChhHHHHHHhCCCEEEec
Q 010613 364 ELESLLSMTMASDKSGLQVAI-HAIGDRANDLVLDMYKSVVVTTGKRDQRFRIE---HAQHLASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~i-Ha~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~---H~~~i~~~~i~r~a~lgv~~s~~ 439 (506)
+.+.++++++.|+++|.++++ |+.....++.+.+.+ + ++.. +..++ |+.+++++++++ .|+.+.++
T Consensus 220 ~~~~l~~~~~la~~~g~~v~i~H~~~~~~~~~~~~~~--a---~~~~--~v~~~~~~h~~~l~~~~~~~---~g~~~~~~ 289 (452)
T 2gwn_A 220 CYRSSAEAVELAERMNARLHILHLSTEKELSLFRNDI--P---TAQK--RITSEVCVHHLWFSDTDYGR---LGNRIKWN 289 (452)
T ss_dssp HHHHHHHHHHHHHHHTCCEEECCCCCTGGGGGSCCSS--C---GGGC--SEEEEEEHHHHHCCGGGHHH---HGGGGCCS
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHhh--c---ccCC--CeEEEEchHHhhcCHHHHhc---cCceEEEC
Confidence 367888999999999999999 988544444322200 0 1111 23555 999999999877 67777788
Q ss_pred chhHhhhhhcCccccccccccccccccchhccccccccc-cccccc
Q 010613 440 VWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVLVSIF-DGLFCY 484 (506)
Q Consensus 440 P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V~lG-D~~a~~ 484 (506)
|.. +. .++..|+.+++++|+++++| |+++++
T Consensus 290 P~l----------r~----~~~~~~l~~~l~~Gv~~~lgTD~~~~~ 321 (452)
T 2gwn_A 290 PAI----------KK----ESDREALRAAVRNGRIDIIATDHAPHL 321 (452)
T ss_dssp SCC----------CC----HHHHHHHHHHHHHSSSCEEECCBCCCC
T ss_pred CCC----------CC----HHHHHHHHHHHHCCCceEEEeCCCCCC
Confidence 852 22 23567999999999999999 986543
No 98
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=62.32 E-value=6.5 Score=37.18 Aligned_cols=69 Identities=9% Similarity=0.057 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCCh---------hHHHHHHhC-C
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS---------GTAARFGDQ-G 433 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~---------~~i~r~a~l-g 433 (506)
+.+.+...++.|.++|++|.+|+.. ... ..+..+.+++| .+..+.||..... +++..+.+. |
T Consensus 122 ~~~~~~~~~~~a~~~~lpv~iH~~~-~~~----~~~~~~~~~~p---l~~vi~H~g~~~~~~~~~~~~~~~~~~l~~~~n 193 (288)
T 2ffi_A 122 TGAQWRPLLERIGEQGWHVELHRQV-ADI----PVLVRALQPYG---LDIVIDHFGRPDARRGLGQPGFAELLTLSGRGK 193 (288)
T ss_dssp TSTTTHHHHHHHHHHTCEEEECSCT-TTH----HHHHHHHTTTT---CCEEESGGGSCCTTSCTTCTTHHHHTTCCCCSC
T ss_pred ccHHHHHHHHHHHHCCCeEEEeech-hhH----HHHHHHHHHCC---CCEEEECCCCCCCCCCCCChhHHHHHHHHhCCC
Confidence 3457888999999999999999853 212 22344455555 4788999988763 455555444 6
Q ss_pred CEEEecc
Q 010613 434 IVASMQV 440 (506)
Q Consensus 434 v~~s~~P 440 (506)
+.+.++.
T Consensus 194 ~y~~~sg 200 (288)
T 2ffi_A 194 VWVKVSG 200 (288)
T ss_dssp EEEEEEC
T ss_pred EEEEeCc
Confidence 6666543
No 99
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=60.27 E-value=33 Score=34.11 Aligned_cols=64 Identities=5% Similarity=0.071 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecc---------cCChhHHHHHHhCCCEE
Q 010613 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVA 436 (506)
Q Consensus 366 e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~---------~i~~~~i~r~a~lgv~~ 436 (506)
+.=++++++.++.|+-+-+==.++++...+++. . +. +..+.|.. .+++++++.+++.|-.+
T Consensus 178 ~~G~~vV~emnrlGmivDlSH~s~~~~~dvl~~---s--~~-----PviaSHSn~ral~~h~RNl~De~l~~la~~GGvi 247 (369)
T 1itu_A 178 PFGQRVVKELNRLGVLIDLAHVSVATMKATLQL---S--RA-----PVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLV 247 (369)
T ss_dssp HHHHHHHHHHHHHTCEEECTTBCHHHHHHHHHH---C--SS-----CCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEE
T ss_pred HhHHHHHHHHHHcCCEEEcCCCCHHHHHHHHHh---c--CC-----CEEEeCCChhhcCCCCCCCCHHHHHHHHHcCCeE
Confidence 355778888999999995522345555544443 2 12 34555654 57899999999999876
Q ss_pred Eec
Q 010613 437 SMQ 439 (506)
Q Consensus 437 s~~ 439 (506)
-++
T Consensus 248 gv~ 250 (369)
T 1itu_A 248 MVN 250 (369)
T ss_dssp EEC
T ss_pred EEE
Confidence 554
No 100
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=56.61 E-value=29 Score=33.12 Aligned_cols=70 Identities=7% Similarity=0.062 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCCh--------------hHHHH
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS--------------GTAAR 428 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~--------------~~i~r 428 (506)
+..+.+.+.++.|.++|+++.+|+-.. . +..+.++.+++| +.+..+.|+..... +.+..
T Consensus 119 ~~~~~~~~~~~~~~~~glpv~ih~~~~-~----l~~l~~ll~~~P--~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~ 191 (303)
T 4do7_A 119 VDDADFARGVAWLQANDYVYDVLVFER-Q----LPDVQAFCARHD--AHWLVLDHAGKPALAEFDRDDTALARWRAALRE 191 (303)
T ss_dssp HHCHHHHHHHHHHHHTTCEEEECCCGG-G----HHHHHHHHHHCC--SSCEEEGGGGCCCGGGCC---CHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCeEEEecCHH-H----HHHHHHHHHHCC--CCCEEEeCCCCCCccccccccchHHHHHHHHHH
Confidence 345788999999999999999998642 1 223444455555 57899999998642 24666
Q ss_pred HHhC-CCEEEec
Q 010613 429 FGDQ-GIVASMQ 439 (506)
Q Consensus 429 ~a~l-gv~~s~~ 439 (506)
+++. +|.+-++
T Consensus 192 la~~~nv~~klS 203 (303)
T 4do7_A 192 LAALPHVVCKLS 203 (303)
T ss_dssp HHTSTTEEEEEC
T ss_pred HHhCCCEEEEeC
Confidence 6665 4666553
No 101
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=45.55 E-value=37 Score=31.53 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHC-CCeEEEeeccc---hHHHHHHHHHHHHHHhcCCCCCCceEeecccCCh-hHHHHHHh-CCCEEE
Q 010613 364 ELESLLSMTMASDKS-GLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGD-QGIVAS 437 (506)
Q Consensus 364 s~e~l~~~~~~a~~~-g~~v~iHa~Gd---~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~-~~i~r~a~-lgv~~s 437 (506)
..+.++..++.|.++ |++|.+|+... .+... +..+.+++| +.+..+.|+..... +.++.+++ .|+.++
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~----~~~~l~~~p--~l~iv~~H~G~~~~~~~~~~~~~~~~~y~~ 201 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPLVLQDIKE----IAELCKAFP--KVPVILGHMGGSNWMTAVELAKEIQNLYLD 201 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTCCHHHHHH----HHHHHHHST--TSCEEEGGGGGGGHHHHHHHHHHCTTEEEE
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCCccccHHH----HHHHHHHCC--CceEEEECCCCccHHHHHHHHHhCCCEEEE
Confidence 345788999999999 99999998632 23333 344445565 34677778765432 33333444 477776
Q ss_pred ecc
Q 010613 438 MQV 440 (506)
Q Consensus 438 ~~P 440 (506)
++.
T Consensus 202 ~s~ 204 (272)
T 3cjp_A 202 TSA 204 (272)
T ss_dssp CTT
T ss_pred ecc
Confidence 654
No 102
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=41.76 E-value=1.8e+02 Score=28.87 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhcCcceEEeCc
Q 010613 247 EALLRASNLALSRGVTTVVDFG 268 (506)
Q Consensus 247 ~~~~~~~~~~~~~GiTsv~d~~ 268 (506)
+.+....+.+++.|+|++..+.
T Consensus 78 e~l~~~~~a~~~~GvTt~l~t~ 99 (381)
T 3iv8_A 78 ETIDTMHKANLKSGCTSFLPTL 99 (381)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHhCCcccccccc
Confidence 4566677788999999999864
No 103
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=39.48 E-value=42 Score=32.91 Aligned_cols=101 Identities=14% Similarity=0.028 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHHHHCCC------eEEEee-ccchHHHHHHHHHHHHHHhcCCCCCCce-EeecccCCh----hHHHHH
Q 010613 362 VMELESLLSMTMASDKSGL------QVAIHA-IGDRANDLVLDMYKSVVVTTGKRDQRFR-IEHAQHLAS----GTAARF 429 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~------~v~iHa-~Gd~av~~~l~a~e~~~~~~g~~~~r~~-i~H~~~i~~----~~i~r~ 429 (506)
..+.++++++++.+++.|. .+++|+ ......+.+.++. +. +....++. ..|+. .++ +.++.+
T Consensus 172 ~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~~~~~----~~-g~~~v~~l~~~h~~-~~~~~~~~~~~~~ 245 (390)
T 1onw_A 172 APDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLL----EN-CDVPISKLLPTHVN-RNVPLFEQALEFA 245 (390)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHHHHHH----HT-CCCCGGGEEEECGG-GSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHHHHHH----hc-cCCceEEeeccccc-cCHHHHHHHHHHH
Confidence 4678899988888776543 367786 3334444333322 22 22222221 13542 232 455666
Q ss_pred HhCCCEEEecchhHhhhhhcCccccccccccccccccchhccccc---cccc-cccc
Q 010613 430 GDQGIVASMQVWTTFWQSIVNPLLISTDVWNFRYTIGPIHIIAVL---VSIF-DGLF 482 (506)
Q Consensus 430 a~lgv~~s~~P~~~~~~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~---V~lG-D~~a 482 (506)
++.+.....+|.. + . .....+++.+++.|++ +.++ |+..
T Consensus 246 ~~~~~~~~~~~~~--------~-~-----~~~~~~l~~~~~~g~~~d~i~l~TD~~~ 288 (390)
T 1onw_A 246 RKGGTIDITSSID--------E-P-----VAPAEGIARAVQAGIPLARVTLSSDGNG 288 (390)
T ss_dssp HTTCCEEEETTCC--------S-S-----SCHHHHHHHHHHTTCCGGGEEEECCBTC
T ss_pred hcCCccccccccC--------C-C-----CcCHHHHHHHHHcCCCccceEEEccCCC
Confidence 6666544444421 0 0 1245678899999985 7999 9754
No 104
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=37.31 E-value=63 Score=30.48 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccchH--HH-HHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHH-h-CCCEEEe
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDRA--ND-LVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFG-D-QGIVASM 438 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~a--v~-~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a-~-lgv~~s~ 438 (506)
+.+.+....+.|.++|++|.+|+..... .. .....+..+.+++| +.+..+.|+....-+++-.++ + .|+.+.+
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~~~~~p~~~~~v~~~~P--~l~ivl~H~G~~~~~~~~~l~~~~~nvy~~~ 213 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDFP--DLTVVSSHGNWPWVQEIIHVAFRRPNLYLSP 213 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHCT--TCCEEEEGGGTTCHHHHHHHHHHCTTEEEEC
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCCCCCccCCHHHHHHHHHHCC--CCEEEeecCCcccHHHHHHHHhHCCCeEecH
Confidence 4567889999999999999999853200 00 00012334445555 567899999865433333332 3 3666653
No 105
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=36.83 E-value=33 Score=25.21 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCC
Q 010613 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQ 411 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~ 411 (506)
..++++.+..|-.+++++.+.+..|.-..+.|+.+.+..++.|..+.
T Consensus 35 lqelekalaragarnvqitisaendeqakelleliarllqklgykdi 81 (96)
T 2jvf_A 35 LQELEKALARAGARNVQITISAENDEQAKELLELIARLLQKLGYKDI 81 (96)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhccccceEEEEEecChHHHHHHHHHHHHHHHHhCCCce
Confidence 45667777777778899999998888888889988888888776543
No 106
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=30.64 E-value=15 Score=34.48 Aligned_cols=12 Identities=25% Similarity=0.434 Sum_probs=10.4
Q ss_pred cccccccccccc
Q 010613 104 GFIDSHVHFIPG 115 (506)
Q Consensus 104 GfiD~H~H~~~~ 115 (506)
|+||+|+|+...
T Consensus 6 G~iD~H~Hl~~~ 17 (291)
T 1bf6_A 6 GYTLAHEHLHID 17 (291)
T ss_dssp SEEEEEECSSEE
T ss_pred ceeeeccCeecC
Confidence 999999999753
No 107
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=29.01 E-value=63 Score=30.98 Aligned_cols=65 Identities=11% Similarity=0.146 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeeccch--------------HHHHHHHH-HHHHHHhcCCCCCCceEeecccCChhHHHH
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIGDR--------------ANDLVLDM-YKSVVVTTGKRDQRFRIEHAQHLASGTAAR 428 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~Gd~--------------av~~~l~a-~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r 428 (506)
+.+.+..+.+.|.++|++|.+|...+. ....+... +..+.+++| +.|..+.|+...-|..++|
T Consensus 140 ~d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~~~li~~gv~~rfP--~Lkii~~H~Gg~~P~~~~r 217 (312)
T 3ij6_A 140 ADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQDYP--NLKILVHHAGAMVPFFSGR 217 (312)
T ss_dssp TSTTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHHHCT--TCCEEESGGGTTTTTSHHH
T ss_pred CCccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHcChHhhCC--CCeEEecCCcccHHHHHHH
Confidence 344677889999999999999985321 11122211 134556776 6799999998544555555
Q ss_pred HH
Q 010613 429 FG 430 (506)
Q Consensus 429 ~a 430 (506)
+.
T Consensus 218 ~~ 219 (312)
T 3ij6_A 218 ID 219 (312)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 108
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=28.77 E-value=1.2e+02 Score=27.98 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHCCCeEE-EeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchh
Q 010613 364 ELESLLSMTMASDKSGLQVA-IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWT 442 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~-iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~ 442 (506)
++++..++++.+.+.|+++. +=..... .++.+++..++++ ...+.+.+.++.++.+...+.|....+.|.+
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~~----a~e~I~~l~~~~~----~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~~ 115 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSDA----AVEAIRLLRQAQP----EMLIGAGTILNGEQALAAKEAGATFVVSPGF 115 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTSTT----HHHHHHHHHHHCT----TCEEEEECCCSHHHHHHHHHHTCSEEECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCCC----HHHHHHHHHHhCC----CCEEeECCcCCHHHHHHHHHcCCCEEEeCCC
Confidence 56788888999999999853 2122222 3455655556554 3578888899999999999999999999976
No 109
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=27.05 E-value=85 Score=29.88 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCC----------hhHHHHHHh-
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA----------SGTAARFGD- 431 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~----------~~~i~r~a~- 431 (506)
++.+.+....+.+.+ |+.+.+|+.... +..+.+..+++ +.+..+.|+-... ++.++.+++
T Consensus 135 ~~~~~~~~~~~~l~~-gl~v~l~~~~~~-----l~~l~~~~~~~---~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~ 205 (303)
T 4d9a_A 135 APKDKFLEVAGRLPA-GWHVVIYFEADI-----LEELRPFMDAI---PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSR 205 (303)
T ss_dssp CCHHHHHHHHTSCCT-TCEEEEECCGGG-----HHHHHHHHHHC---SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHhc-CCEEEEeccccc-----HHHHHHHHHHC---CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhC
Confidence 577899999999999 999999986432 33344444554 4689999999864 234555566
Q ss_pred CCCEEEec
Q 010613 432 QGIVASMQ 439 (506)
Q Consensus 432 lgv~~s~~ 439 (506)
-+|.+-++
T Consensus 206 ~NV~vKlS 213 (303)
T 4d9a_A 206 EDIWFKAT 213 (303)
T ss_dssp TTEEEECC
T ss_pred CCEEEEee
Confidence 45666654
No 110
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=25.75 E-value=46 Score=30.68 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=23.9
Q ss_pred cccccccccccccccccccccCCCCCCHHHHHHHHHHHHH
Q 010613 103 PGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVK 142 (506)
Q Consensus 103 PGfiD~H~H~~~~g~~~~~~~l~~~~s~~~~~~~l~~~~~ 142 (506)
.|++|.|+|...+. -.|..+.++.++.++++.+
T Consensus 3 ~~m~D~H~Ht~~~~-------ddg~~~~e~~~e~i~~A~~ 35 (247)
T 2wje_A 3 MGMIDIHSHIVFDV-------DDGPKSREESKALLAESYR 35 (247)
T ss_dssp -CEEECCBCCSTTS-------SSSCSSHHHHHHHHHHHHH
T ss_pred CCCEEEecccCCCC-------CCCCCCHHHHHHHHHHHHH
Confidence 46899999985321 1356788999999998876
No 111
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=25.51 E-value=2.3e+02 Score=27.15 Aligned_cols=69 Identities=10% Similarity=0.215 Sum_probs=48.4
Q ss_pred CCCHHHHHHHHHHHHHCCCeE-EEeeccc-hH----HHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCE
Q 010613 362 VMELESLLSMTMASDKSGLQV-AIHAIGD-RA----NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 435 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~~v-~iHa~Gd-~a----v~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~ 435 (506)
..+.+++.+.++.+.+.|+.- .+ ..|+ .. .+.+++.++.+.++.+. .. -.....++++.++++++.|+.
T Consensus 90 ~ls~eei~~~~~~~~~~G~~~i~l-~gGe~p~~~~~~~~~~~l~~~ik~~~~i---~i-~~s~g~~~~e~l~~L~~aG~~ 164 (350)
T 3t7v_A 90 RLTMEEIKETCKTLKGAGFHMVDL-TMGEDPYYYEDPNRFVELVQIVKEELGL---PI-MISPGLMDNATLLKAREKGAN 164 (350)
T ss_dssp BCCHHHHHHHHHHHTTSCCSEEEE-EECCCHHHHHSTHHHHHHHHHHHHHHCS---CE-EEECSSCCHHHHHHHHHTTEE
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEE-eeCCCCccccCHHHHHHHHHHHHhhcCc---eE-EEeCCCCCHHHHHHHHHcCCC
Confidence 469999999999888888763 34 4454 32 34556667666655553 22 335567899999999999975
No 112
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=25.25 E-value=1.4e+02 Score=28.86 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccC-ChhHHHHHHhCCCEEEec
Q 010613 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL-ASGTAARFGDQGIVASMQ 439 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i-~~~~i~r~a~lgv~~s~~ 439 (506)
.+.+.++++.|.++|+.+.+=+.+-.-.+.+++.+++..++++..... ...-+.+- ++++++.+.+.++.+-+.
T Consensus 117 ~~~l~~i~~~A~~~~v~v~iDaEe~~~~~~tl~~~~~l~~~~~~~~vg-~t~QaYlkrt~~~l~~l~~~~~~vRLV 191 (312)
T 4h6q_A 117 LTNARRIIAKAKEYGGFICLDMEDHTRVDVTLEQFRTLVGEFGAEHVG-TVLQSYLYRSLGDRASLDDLRPNIRMV 191 (312)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSGGGHHHHHHHHHHHHHHHCTTTEE-EEEETTBTTHHHHHHHTGGGCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEccCcccchHHHHHHHHHHHHHcCCCcEE-EEeehhccccHHHHHHHHhcCCCeEEe
Confidence 578999999999999999998887777888889888887754322111 22233332 467777777766555443
No 113
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=25.19 E-value=2.9e+02 Score=26.28 Aligned_cols=68 Identities=13% Similarity=0.181 Sum_probs=46.5
Q ss_pred CCCHHHHHHHHHHHHHCCCe-EEEeeccc-hHH--HHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCE
Q 010613 362 VMELESLLSMTMASDKSGLQ-VAIHAIGD-RAN--DLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 435 (506)
Q Consensus 362 ~~s~e~l~~~~~~a~~~g~~-v~iHa~Gd-~av--~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~ 435 (506)
..+.+++.+.++.+.+.|+. +.+ ..|+ ... +.+.+.++.+.+. + .+ .-.....++++.++++++.|+.
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~-~gGe~p~~~~~~~~~li~~i~~~-~---~~-i~~s~g~l~~e~l~~L~~ag~~ 154 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVL-QSGEDPYXMPDVISDIVKEIKKM-G---VA-VTLSLGEWPREYYEKWKEAGAD 154 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEE-EESCCGGGTTHHHHHHHHHHHTT-S---CE-EEEECCCCCHHHHHHHHHHTCC
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEE-EeCCCCCccHHHHHHHHHHHHhc-C---ce-EEEecCCCCHHHHHHHHHhCCC
Confidence 46899999999999888876 333 3344 433 5566666665443 2 22 2236677899999999999974
No 114
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=25.12 E-value=1e+02 Score=29.39 Aligned_cols=65 Identities=8% Similarity=0.107 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeecc---ch----------------HHHHHHH-HHHHHHHhcCCCC-CCceEeecccC
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIG---DR----------------ANDLVLD-MYKSVVVTTGKRD-QRFRIEHAQHL 421 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~G---d~----------------av~~~l~-a~e~~~~~~g~~~-~r~~i~H~~~i 421 (506)
++.+.+..+.+.|.++|++|.+|+.. +. ....+.+ .+..+.+++| + .+..+.|+...
T Consensus 155 l~d~~~~p~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~v~~~~P--~~l~~v~~H~Gg~ 232 (334)
T 2hbv_A 155 LDDATLEAFLTHCANEDIPILVHPWDMMGGQRMKKWMLPWLVAMPAETQLAILSLILSGAFERIP--KSLKICFGHGGGS 232 (334)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEECCSCSCTTTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGGTSC--TTCCEEESGGGTT
T ss_pred CCcHHHHHHHHHHHHCCCEEEECCCCCCCCcchhhhhhhhhhhcHHHHHHHHHHHHHcCchhhCC--CcceEEeecccch
Confidence 34578999999999999999999853 10 0001111 1334556665 4 67899999643
Q ss_pred ChhHHHHH
Q 010613 422 ASGTAARF 429 (506)
Q Consensus 422 ~~~~i~r~ 429 (506)
-+..+.|+
T Consensus 233 ~p~~~~r~ 240 (334)
T 2hbv_A 233 FAFLLGRV 240 (334)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444454
No 115
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=24.28 E-value=3.2e+02 Score=25.48 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHH---------------------HHHhcCCCCCCceEeecccC
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKS---------------------VVVTTGKRDQRFRIEHAQHL 421 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~---------------------~~~~~g~~~~r~~i~H~~~i 421 (506)
+++++++++.+.|++.|+.+-+-+......+.+++.-.. .... .......+.=...-
T Consensus 137 L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~--ip~~~~~VsESGI~ 214 (258)
T 4a29_A 137 LTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISM--IPSNVVKVAKLGIS 214 (258)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTT--SCTTSEEEEEESSC
T ss_pred cCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhh--CCCCCEEEEcCCCC
Confidence 578999999999999999976555544445555542111 0011 11334455555666
Q ss_pred ChhHHHHHHhCCCEEEe
Q 010613 422 ASGTAARFGDQGIVASM 438 (506)
Q Consensus 422 ~~~~i~r~a~lgv~~s~ 438 (506)
+++|+.++++.|+...+
T Consensus 215 t~~dv~~l~~~G~~a~L 231 (258)
T 4a29_A 215 ERNEIEELRKLGVNAFL 231 (258)
T ss_dssp CHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHCCCCEEE
Confidence 78888888888887654
No 116
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=24.17 E-value=1.3e+02 Score=30.42 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHCCCeEEEeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecc---------cCChhHHHHHHhCCCEE
Q 010613 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVA 436 (506)
Q Consensus 366 e~l~~~~~~a~~~g~~v~iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~---------~i~~~~i~r~a~lgv~~ 436 (506)
+.=++++++.++.|+-|-+==..+++...+++. . ..+..+.|.. .+++++++.+++.|-.+
T Consensus 193 ~~G~~vV~eMNrlGmiVDlSH~s~~t~~dvl~~---s-------~~PVIaSHSnaral~~hpRNl~De~l~~la~~GGVI 262 (417)
T 3b40_A 193 PLGKQAVERLNDLGVIIDVSQMSTKALEQVAAL---S-------RAPIVASHSAPRALVDIKRNLSDHEMQLIKDSGGVI 262 (417)
T ss_dssp HHHHHHHHHHHHHTCEEECTTBCHHHHHHHHHH---C-------SSCEEEEEECBTTTSCCTTSBCHHHHHHHHHTTCEE
T ss_pred hhHHHHHHHHHHcCCEEECCCCCHHHHHHHHHh---c-------CCCEEEeCCchhhcCCCCCCCCHHHHHHHHHcCCEE
Confidence 356788888999999995532345555555542 1 2245666765 67899999999999765
Q ss_pred Ee--cchh
Q 010613 437 SM--QVWT 442 (506)
Q Consensus 437 s~--~P~~ 442 (506)
-+ .|.|
T Consensus 263 gv~f~~~f 270 (417)
T 3b40_A 263 QVVGFPAY 270 (417)
T ss_dssp EEECCHHH
T ss_pred EEEechhh
Confidence 44 4544
No 117
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=24.14 E-value=1.6e+02 Score=26.71 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHHHCCCeEE-EeeccchHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecch
Q 010613 363 MELESLLSMTMASDKSGLQVA-IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVW 441 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~-iHa~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~ 441 (506)
.+.++..++++.+.+.|+++. +-.... ..++.+++..++++ ...+--++.++.++.+...+.|....+.|.
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t~----~a~~~I~~l~~~~p----~~~IGAGTVlt~~~a~~ai~AGA~fivsP~ 93 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRTE----AGLAAISAIKKAVP----EAIVGAGTVCTADDFQKAIDAGAQFIVSPG 93 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTST----THHHHHHHHHHHCT----TSEEEEECCCSHHHHHHHHHHTCSEEEESS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCc----cHHHHHHHHHHHCC----CCeEeeccccCHHHHHHHHHcCCCEEEeCC
Confidence 367888899999999999853 322222 34566666666664 257777899999999999999999989898
Q ss_pred h
Q 010613 442 T 442 (506)
Q Consensus 442 ~ 442 (506)
+
T Consensus 94 ~ 94 (217)
T 3lab_A 94 L 94 (217)
T ss_dssp C
T ss_pred C
Confidence 6
No 118
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=23.32 E-value=1.1e+02 Score=29.76 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHCCCeEEE-eeccchHHHHHHHHHHHHHHhcCCCCCCceEeecc---------cCChhHHHHHHhCCCEE
Q 010613 367 SLLSMTMASDKSGLQVAI-HAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVA 436 (506)
Q Consensus 367 ~l~~~~~~a~~~g~~v~i-Ha~Gd~av~~~l~a~e~~~~~~g~~~~r~~i~H~~---------~i~~~~i~r~a~lgv~~ 436 (506)
.=++++++.++.|+-+-+ |+ ++++...+++ .. ..+..+.|.. .+++++++.+++.|-.+
T Consensus 140 ~G~~vV~emnrlGmivDlSH~-s~~~~~dvl~---~s-------~~Pvi~SHsn~~al~~h~RNl~De~irala~~GGvi 208 (325)
T 2i5g_A 140 FGREIVAEMNRVGIMCDLSHV-GSKTSEEVIL---ES-------KKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFV 208 (325)
T ss_dssp HHHHHHHHHHHHTCEEECTTB-CHHHHHHHHH---HC-------SSCCEEEEECBTTTCCCTTSBCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHcCcEEEcCcC-CHHHHHHHHH---Hh-------CCCEEEeCCCccccCCCCCCCCHHHHHHHHHcCCeE
Confidence 556788889999999865 44 4555444443 32 1345667764 45799999999999877
Q ss_pred Ee--cchh
Q 010613 437 SM--QVWT 442 (506)
Q Consensus 437 s~--~P~~ 442 (506)
-+ .|.+
T Consensus 209 gv~~~~~f 216 (325)
T 2i5g_A 209 GVTMFAPF 216 (325)
T ss_dssp EECCCGGG
T ss_pred EEeecchh
Confidence 44 4544
No 119
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=22.57 E-value=48 Score=23.19 Aligned_cols=26 Identities=27% Similarity=0.285 Sum_probs=23.1
Q ss_pred CeEEEEecCCchhhhcHHHHHHcCCC
Q 010613 177 NPVWLSRMDGHMGLANSVALQLVGIT 202 (506)
Q Consensus 177 ~Pv~i~~~~~H~~~~Ns~aL~~~gi~ 202 (506)
.++++.+.+|+..++|.++.+.+|++
T Consensus 3 ~~i~~~d~~g~i~~~N~~~~~l~g~~ 28 (96)
T 3a0s_A 3 TAIITLSKDGRITEWNKKAEQLFGLK 28 (96)
T ss_dssp CEEEEEETTSBEEEECHHHHHHHCCC
T ss_pred ceEEEEcCCCCEeehhHHHHHHhCCC
Confidence 46888899999999999999999975
No 120
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=22.19 E-value=2.5e+02 Score=25.75 Aligned_cols=79 Identities=9% Similarity=0.111 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHCCCeE-EEeecc-----chHHHHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHH-HhC---CC
Q 010613 365 LESLLSMTMASDKSGLQV-AIHAIG-----DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARF-GDQ---GI 434 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v-~iHa~G-----d~av~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~-a~l---gv 434 (506)
.+.+++.++.|.+.|.+. .+|.-- +.+.+.+.+.+.++.+.....+.+..+|-.. -+.+++.++ .+. ++
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~-~~~~~~~~l~~~~~~~~~ 179 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ-ESADHLLEFIEDVNRPNL 179 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS-SCHHHHHHHHHHHCCTTE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC-CCHHHHHHHHHhcCCCCE
Confidence 366777777788877764 445320 2344444444444332211223344554432 345555444 333 36
Q ss_pred EEEecchhHh
Q 010613 435 VASMQVWTTF 444 (506)
Q Consensus 435 ~~s~~P~~~~ 444 (506)
.+.+-+.|.+
T Consensus 180 g~~~D~~h~~ 189 (290)
T 3tva_A 180 GINFDPANMI 189 (290)
T ss_dssp EEEECHHHHH
T ss_pred EEEeccHHHH
Confidence 6666666654
No 121
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=21.73 E-value=80 Score=29.87 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=21.7
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEeec
Q 010613 363 MELESLLSMTMASDKSGLQVAIHAI 387 (506)
Q Consensus 363 ~s~e~l~~~~~~a~~~g~~v~iHa~ 387 (506)
++.+.+..+.+.|.++|++|.+|+.
T Consensus 142 ~~~~~~~~~~~~a~~~~lpv~iH~~ 166 (327)
T 2dvt_A 142 YDLPQYRPFWGEVEKLDVPFYLHPR 166 (327)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEEECC
T ss_pred CCCcchHHHHHHHHHcCCeEEECCC
Confidence 4556889999999999999999974
No 122
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=21.51 E-value=54 Score=29.90 Aligned_cols=85 Identities=9% Similarity=0.002 Sum_probs=45.5
Q ss_pred HHHHHHHCCCeEEEeec---cchHH--HHHHHHHHHHHHhcCCCCCCceEeecccCChhHHHHHHhCCCEEEecchhHhh
Q 010613 371 MTMASDKSGLQVAIHAI---GDRAN--DLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQVWTTFW 445 (506)
Q Consensus 371 ~~~~a~~~g~~v~iHa~---Gd~av--~~~l~a~e~~~~~~g~~~~r~~i~H~~~i~~~~i~r~a~lgv~~s~~P~~~~~ 445 (506)
..+.|.++|+++...-. .+++. .++++.+ +++. .+.-....-...++++-+++++ .+ .+.+.|+.
T Consensus 52 ~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l----~~~~-~Dlivlagy~~iL~~~~l~~~~-~~-~iNiHpSL--- 121 (215)
T 3da8_A 52 AAEIAAEASVPVFTVRLADHPSRDAWDVAITAAT----AAHE-PDLVVSAGFMRILGPQFLSRFY-GR-TLNTHPAL--- 121 (215)
T ss_dssp HHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH----HTTC-CSEEEEEECCSCCCHHHHHHHT-TT-EEEEESSC---
T ss_pred HHHHHHHcCCCEEEeCcccccchhhhhHHHHHHH----HhhC-CCEEEEcCchhhCCHHHHhhcc-CC-eEEeCccc---
Confidence 36789999999876532 22221 1222222 2222 1333344445778888888876 22 34444543
Q ss_pred hhhcCccccccccccccccccchhcccccc
Q 010613 446 QSIVNPLLISTDVWNFRYTIGPIHIIAVLV 475 (506)
Q Consensus 446 ~~~~~~~~~g~~~~~~~~pi~~~~~~Gv~V 475 (506)
+.. ++|..|+...+.+|.+.
T Consensus 122 --------LP~--yrG~~pi~~Ai~~G~~~ 141 (215)
T 3da8_A 122 --------LPA--FPGTHGVADALAYGVKV 141 (215)
T ss_dssp --------TTS--SCSTTHHHHHHHHTCSE
T ss_pred --------ccC--CCCchHHHHHHHcCCCe
Confidence 111 34667777777776543
No 123
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=21.28 E-value=43 Score=20.25 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHHCCCeEEE
Q 010613 364 ELESLLSMTMASDKSGLQVAI 384 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~i 384 (506)
++|+++++.+.|.+.++++.+
T Consensus 13 tpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCCCB
T ss_pred CHHHHHHHHHHHHhccEEEEe
Confidence 689999999999999988754
No 124
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=20.64 E-value=50 Score=25.14 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=25.3
Q ss_pred CCCeEEEEecC-CchhhhcHHHHHHcCCCCC
Q 010613 175 PHNPVWLSRMD-GHMGLANSVALQLVGITNL 204 (506)
Q Consensus 175 ~~~Pv~i~~~~-~H~~~~Ns~aL~~~gi~~~ 204 (506)
+..+|++.+.+ |...++|.+|.+++|.+.+
T Consensus 7 ~~~~i~~~d~~~g~I~~~N~aa~~l~G~~~~ 37 (114)
T 1ll8_A 7 FNKAIFTVDAKTTEILVANDKACGLLGYSSQ 37 (114)
T ss_dssp TTCEEEEEETTTCBEEEECTTHHHHHTCCTT
T ss_pred CCceEEEEECCCCeEEEehHHHHHHhCCCHH
Confidence 34578888888 9999999999999998653
No 125
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=20.62 E-value=27 Score=33.25 Aligned_cols=12 Identities=33% Similarity=0.276 Sum_probs=10.5
Q ss_pred cccccccccccc
Q 010613 104 GFIDSHVHFIPG 115 (506)
Q Consensus 104 GfiD~H~H~~~~ 115 (506)
||||+|+|+...
T Consensus 17 G~iD~H~Hl~~~ 28 (314)
T 2vc7_A 17 GFTLIHEHLRVF 28 (314)
T ss_dssp CSEESSCBSCBC
T ss_pred CCcccccccccC
Confidence 999999999753
No 126
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=20.47 E-value=76 Score=29.73 Aligned_cols=23 Identities=22% Similarity=0.091 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeec
Q 010613 365 LESLLSMTMASDKSGLQVAIHAI 387 (506)
Q Consensus 365 ~e~l~~~~~~a~~~g~~v~iHa~ 387 (506)
.+.+....+.|.++|++|.+|+.
T Consensus 134 ~~~~~~~~~~a~~~~lpv~iH~~ 156 (307)
T 2f6k_A 134 SPVLERVYQELDARQAIVALHPN 156 (307)
T ss_dssp CGGGHHHHHHHHTTTCEEEEECC
T ss_pred cHhHHHHHHHHHHcCCeEEECCC
Confidence 35788899999999999999985
No 127
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=20.42 E-value=81 Score=31.06 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=27.2
Q ss_pred CCCeeecccccccccccccccccccccCCCCCCHHHHHHHHHHHHHc
Q 010613 97 QGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKN 143 (506)
Q Consensus 97 ~g~~v~PGfiD~H~H~~~~g~~~~~~~l~~~~s~~~~~~~l~~~~~~ 143 (506)
+++.|.||.||+|.-- +.+.+++.++++++.+.
T Consensus 281 ~~k~v~lGvvd~~s~~--------------ve~~eev~~ri~~a~~~ 313 (357)
T 3rpd_A 281 RGKKVMVGAIDVATDT--------------IETAEEVADTLRKALKF 313 (357)
T ss_dssp TTSEEEEECSCTTCSS--------------CCCHHHHHHHHHHHHTT
T ss_pred CCCEEEeccccCcCCC--------------CCCHHHHHHHHHHHHHh
Confidence 4678999999998653 37899999999998764
No 128
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=20.12 E-value=3.4e+02 Score=24.44 Aligned_cols=81 Identities=10% Similarity=0.059 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHCCCeE-EEeeccchHHHHHHHHHHHHHHhcC-CCCCCceEeecc-----cC-ChhHHHHHHhC-CC
Q 010613 364 ELESLLSMTMASDKSGLQV-AIHAIGDRANDLVLDMYKSVVVTTG-KRDQRFRIEHAQ-----HL-ASGTAARFGDQ-GI 434 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v-~iHa~Gd~av~~~l~a~e~~~~~~g-~~~~r~~i~H~~-----~i-~~~~i~r~a~l-gv 434 (506)
+.+.+++.++.|.+.|.++ .+|.... ..+.+.+.+.++.+... ..+.+..+|... +. +.+++.++.+. ++
T Consensus 86 ~~~~~~~~i~~a~~lGa~~vv~h~g~~-~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~v 164 (270)
T 3aam_A 86 SVASLADDLEKAALLGVEYVVVHPGSG-RPERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVADTPL 164 (270)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCBS-CHHHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCC-CHHHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHHHhCCE
Confidence 5678899999999999874 5675432 11445555555443332 235677887762 23 77888777554 78
Q ss_pred EEEecchhHhh
Q 010613 435 VASMQVWTTFW 445 (506)
Q Consensus 435 ~~s~~P~~~~~ 445 (506)
.+..-+.|.++
T Consensus 165 g~~lD~~H~~~ 175 (270)
T 3aam_A 165 QVCLDTCHAYA 175 (270)
T ss_dssp EEEEEHHHHHH
T ss_pred EEEEehhhHHh
Confidence 88777777644
No 129
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=20.07 E-value=95 Score=29.65 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeecc---chH----------------HHHHHH-HHHHHHHhcCCCCCCceEeecccCCh
Q 010613 364 ELESLLSMTMASDKSGLQVAIHAIG---DRA----------------NDLVLD-MYKSVVVTTGKRDQRFRIEHAQHLAS 423 (506)
Q Consensus 364 s~e~l~~~~~~a~~~g~~v~iHa~G---d~a----------------v~~~l~-a~e~~~~~~g~~~~r~~i~H~~~i~~ 423 (506)
+.+.+..+.+.|.++|++|.+|+.. +.. ...+.+ .+..+.+++| +.+..+.|+...-|
T Consensus 153 ~d~~~~~~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~P--~l~~v~~H~Gg~~p 230 (336)
T 2wm1_A 153 NAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAETTIAICSMIMGGVFEKFP--KLKVCFAHGGGAFP 230 (336)
T ss_dssp TCGGGHHHHHHHHHHTCEEEEECCSCCCSGGGSSTTHHHHTHHHHHHHHHHHHHHHTTHHHHCT--TCCEEESGGGTTHH
T ss_pred CCccHHHHHHHHHHcCCEEEECCCCCCccccccccchHHHhccHHHHHHHHHHHHHcCchhhCC--CCeEehhcccchHH
Confidence 4457889999999999999999853 210 011111 1334556665 56889999964334
Q ss_pred hHHHHH
Q 010613 424 GTAARF 429 (506)
Q Consensus 424 ~~i~r~ 429 (506)
..+.|+
T Consensus 231 ~~~~r~ 236 (336)
T 2wm1_A 231 FTVGRI 236 (336)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
Done!