Query 010616
Match_columns 506
No_of_seqs 212 out of 1957
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 3E-87 1E-91 713.5 42.7 474 29-506 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 3.6E-71 1.2E-75 572.8 38.9 367 28-506 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 2.7E-70 9.2E-75 568.0 36.6 372 26-506 6-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2.9E-64 9.9E-69 517.9 36.4 331 72-506 12-342 (351)
5 3k1w_A Renin; protease, altern 100.0 4.2E-64 1.4E-68 514.4 35.9 332 71-506 6-340 (341)
6 3cms_A Chymosin B; hydrolase, 100.0 7.9E-64 2.7E-68 508.9 37.5 321 72-506 3-323 (323)
7 1dpj_A Proteinase A; proteinas 100.0 9.2E-64 3.2E-68 509.7 37.5 326 73-506 3-329 (329)
8 4aa9_A Chymosin; hydrolase, as 100.0 6.5E-64 2.2E-68 508.7 34.5 319 74-506 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 2.2E-63 7.6E-68 505.8 35.4 322 74-506 3-324 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 1.6E-63 5.5E-68 507.9 33.7 325 74-506 4-329 (329)
11 1miq_A Plasmepsin; aspartic pr 100.0 1.5E-62 5.2E-67 509.1 36.0 321 71-506 50-374 (375)
12 3qvc_A Histo-aspartic protease 100.0 3.3E-62 1.1E-66 516.4 36.0 321 71-506 125-449 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 8.1E-62 2.8E-66 513.0 35.4 322 71-506 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 3.2E-61 1.1E-65 491.2 33.0 318 72-506 6-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 5.1E-61 1.8E-65 495.5 33.0 326 71-506 6-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 6.8E-59 2.3E-63 473.0 38.6 311 79-506 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 1.4E-58 4.9E-63 471.4 36.9 313 79-505 11-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 2.2E-58 7.5E-63 470.1 35.4 310 81-505 13-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 2.1E-57 7.2E-62 464.5 36.1 313 73-506 3-329 (339)
20 1ibq_A Aspergillopepsin; aspar 100.0 4.3E-57 1.5E-61 459.7 37.6 309 81-506 12-325 (325)
21 2qzx_A Candidapepsin-5; aspart 100.0 4.8E-57 1.6E-61 462.5 36.7 314 73-506 3-331 (342)
22 1izd_A Aspartic proteinase; su 100.0 5.8E-57 2E-61 458.4 36.8 306 81-506 13-323 (323)
23 1j71_A Candidapepsin, aspartic 100.0 5E-57 1.7E-61 460.9 35.2 309 73-506 3-324 (334)
24 3pvk_A Candidapepsin-2; hydrol 100.0 8.8E-57 3E-61 460.3 35.2 315 73-506 3-331 (342)
25 1bxo_A Protein (penicillopepsi 100.0 4.7E-57 1.6E-61 459.1 31.6 306 81-506 13-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 4.9E-56 1.7E-60 454.7 35.4 312 73-506 3-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-55 4.7E-60 468.4 28.1 327 75-506 66-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 2E-54 6.7E-59 449.8 31.7 324 76-506 6-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 2.1E-54 7.1E-59 452.4 27.5 323 77-506 22-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 9.6E-54 3.3E-58 446.4 31.1 325 76-506 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 7.5E-53 2.6E-57 440.7 27.1 325 72-506 9-387 (403)
32 3vla_A EDGP; extracellular, in 100.0 4.9E-52 1.7E-56 435.2 25.6 330 71-505 7-398 (413)
33 1t6e_X Xylanase inhibitor; two 100.0 1.4E-49 4.7E-54 413.0 21.2 324 74-506 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 3.3E-48 1.1E-52 377.4 27.3 238 72-313 2-239 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.2E-44 3.9E-49 352.7 27.9 241 164-506 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.3E-23 8E-28 173.2 10.9 93 73-165 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 3.7E-21 1.3E-25 156.9 9.4 87 419-506 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.8 2.2E-19 7.6E-24 151.9 3.3 105 311-415 2-108 (108)
39 2qyp_A Proactivator polypeptid 97.2 0.0002 7E-09 57.8 3.2 43 375-417 3-45 (91)
40 4ddj_A Saposin-A, protein A; s 97.1 0.00032 1.1E-08 55.5 3.6 41 377-417 3-43 (83)
41 2qyp_A Proactivator polypeptid 97.1 0.00021 7.2E-09 57.7 2.6 39 316-354 46-84 (91)
42 3bqp_A Proactivator polypeptid 97.0 0.00036 1.2E-08 54.6 3.3 46 378-426 3-48 (80)
43 2gtg_A Proactivator polypeptid 96.8 0.00068 2.3E-08 53.6 3.5 41 376-416 3-43 (83)
44 3bqp_A Proactivator polypeptid 96.8 0.00043 1.5E-08 54.2 2.2 37 316-352 43-79 (80)
45 2js9_A Saposin-like protein fa 96.8 0.00027 9.2E-09 58.0 1.0 37 316-352 63-99 (99)
46 1l9l_A Granulysin; saposin fol 96.8 0.00068 2.3E-08 52.5 3.2 38 378-416 2-39 (74)
47 1of9_A Pore-forming peptide am 96.7 0.00076 2.6E-08 52.6 2.8 40 377-417 2-41 (77)
48 2gtg_A Proactivator polypeptid 96.6 0.0004 1.4E-08 54.9 0.3 38 316-353 45-82 (83)
49 1nkl_A NK-lysin; saposin fold, 96.5 0.00094 3.2E-08 52.2 2.2 38 379-416 3-40 (78)
50 1nkl_A NK-lysin; saposin fold, 96.5 0.00049 1.7E-08 53.9 0.4 37 316-352 41-77 (78)
51 1of9_A Pore-forming peptide am 96.4 0.0006 2E-08 53.2 0.3 38 314-351 40-77 (77)
52 1n69_A Saposin B; lipid bindin 96.3 0.0022 7.5E-08 50.4 3.3 40 377-416 3-43 (81)
53 4ddj_A Saposin-A, protein A; s 95.9 0.0012 4.2E-08 52.1 -0.2 37 316-352 45-82 (83)
54 1n69_A Saposin B; lipid bindin 95.9 0.0015 5.1E-08 51.4 0.2 37 315-352 44-80 (81)
55 1l9l_A Granulysin; saposin fol 95.6 0.0026 9E-08 49.1 0.6 34 316-349 41-74 (74)
56 2js9_A Saposin-like protein fa 95.5 0.0041 1.4E-07 50.8 1.5 52 375-428 19-70 (99)
57 2i1a_A DNA damage-inducible pr 94.0 0.081 2.8E-06 46.1 6.1 91 81-196 23-115 (148)
58 3s64_A AC-SLP-1, saposin-like 93.0 0.035 1.2E-06 44.0 1.7 41 311-351 47-87 (87)
59 3s8i_A Protein DDI1 homolog 1; 88.3 0.67 2.3E-05 40.5 5.6 91 82-196 22-114 (148)
60 2i1a_A DNA damage-inducible pr 88.1 1.4 4.8E-05 38.0 7.6 26 478-503 109-134 (148)
61 2hs1_A HIV-1 protease; ultra-h 75.5 3.5 0.00012 33.3 4.7 30 85-116 9-38 (99)
62 1fmb_A EIAV protease; hydrolas 72.4 3.5 0.00012 33.6 4.1 28 84-113 8-35 (104)
63 3ec0_A Protease; HIV-2, inhibi 68.5 6 0.0002 31.9 4.5 29 86-116 10-38 (99)
64 3liy_A Protease; hydrolase, hy 67.8 4.2 0.00014 33.6 3.5 32 86-117 12-46 (116)
65 3vcm_P Prorenin; aspartic prot 61.6 6 0.0002 26.5 2.8 27 26-52 6-32 (43)
66 1htr_P Progastricsin (Pro segm 58.2 7.9 0.00027 25.3 3.0 26 28-53 2-27 (43)
67 3s8i_A Protein DDI1 homolog 1; 57.8 8.4 0.00029 33.3 3.9 26 478-503 108-133 (148)
68 1tzs_P Activation peptide from 57.8 6.9 0.00023 24.2 2.5 27 27-53 2-28 (35)
69 2hah_A Protease, retropepsin; 56.8 9.6 0.00033 31.6 3.8 27 85-114 15-41 (116)
70 3sqf_A Protease; folded monome 50.1 16 0.00054 30.1 4.1 29 86-116 11-39 (114)
71 3slz_A GAG-Pro-POL polyprotein 47.0 22 0.00075 30.1 4.6 31 83-115 21-51 (132)
72 3s64_A AC-SLP-1, saposin-like 46.0 5.6 0.00019 31.2 0.7 38 376-415 9-46 (87)
73 1bxo_A Protein (penicillopepsi 40.8 34 0.0012 33.1 5.6 42 250-301 3-44 (323)
74 2rsp_A RSV protease; hydrolase 38.5 28 0.00096 29.1 3.9 22 96-117 30-51 (124)
75 1ibq_A Aspergillopepsin; aspar 38.1 36 0.0012 33.0 5.3 41 251-301 3-43 (325)
76 1izd_A Aspartic proteinase; su 37.7 40 0.0014 32.6 5.6 41 251-301 4-44 (323)
77 3ka2_A [L-Ala51;Gly51']HIV-1 p 35.8 30 0.001 31.6 3.9 30 84-115 8-37 (203)
78 1oew_A Endothiapepsin; hydrola 27.6 71 0.0024 30.9 5.5 43 251-301 3-46 (329)
79 1lya_A Cathepsin D; lysosomal 26.9 49 0.0017 26.0 3.4 32 261-300 12-43 (97)
80 3c9x_A Trichoderma reesei aspa 26.3 77 0.0026 30.6 5.5 43 251-301 3-46 (329)
81 1mpp_A Pepsin; hydrolase(acid 25.9 70 0.0024 31.3 5.1 44 250-301 4-49 (361)
82 1fmb_A EIAV protease; hydrolas 24.2 41 0.0014 27.1 2.4 31 268-305 10-40 (104)
83 3f0i_A Arsenate reductase; str 24.1 57 0.002 26.7 3.4 35 376-410 10-53 (119)
84 2apr_A Rhizopuspepsin; hydrola 23.6 90 0.0031 30.0 5.4 43 251-301 4-46 (325)
85 2hah_A Protease, retropepsin; 22.8 45 0.0015 27.5 2.5 30 263-300 11-40 (116)
86 2hs1_A HIV-1 protease; ultra-h 21.9 49 0.0017 26.5 2.4 27 267-300 9-35 (99)
87 1b5f_A Protein (cardosin A); h 20.9 1.2E+02 0.004 27.8 5.3 39 74-114 181-227 (239)
88 3rdw_A Putative arsenate reduc 20.6 56 0.0019 26.8 2.7 36 375-410 10-54 (121)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3e-87 Score=713.46 Aligned_cols=474 Identities=64% Similarity=1.152 Sum_probs=400.5
Q ss_pred EEEeeeeecCchhhhHHhhhhhHhhhccCCcccccccccC-CCCceeEeceecCCceEEEEEEecCCCceEEEEecCCCC
Q 010616 29 RRIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVRHRLG-DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSS 107 (506)
Q Consensus 29 ~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs 107 (506)
+||||+|++..++.+.+.+......+. ..+++ ...+ .++...+||.|+.+..|+++|+||||||+|.|+|||||+
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs 76 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQP-LLSGA---NPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSS 76 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC--------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHH-HHhhc---ccccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCc
Confidence 489999999998887765532111000 01111 0111 134567999999999999999999999999999999999
Q ss_pred ceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEEEEEEEEEEEECcEEecccEEEEEEEeCCcccccc
Q 010616 108 NLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLA 187 (506)
Q Consensus 108 ~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~ 187 (506)
++||+|..|..+..|..|+.|+|++|+||+..++.|.+.|++|++.|.+++|+|++|+..++++.||++....+..|...
T Consensus 77 ~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~ 156 (478)
T 1qdm_A 77 NLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVA 156 (478)
T ss_dssp CCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHC
T ss_pred ceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccc
Confidence 99999999964568999999999999999999999999999999999999999999999999999999998766556667
Q ss_pred ceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEE
Q 010616 188 RFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFE 267 (506)
Q Consensus 188 ~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~ 267 (506)
.++||||||++..+.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|++.|+|+...++|.|.
T Consensus 157 ~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~ 236 (478)
T 1qdm_A 157 KFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFD 236 (478)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEE
T ss_pred cccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEE
Confidence 78999999999988777789999999999999999999998864334589999999999999999999999999999999
Q ss_pred EceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCcccccc
Q 010616 268 LGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQ 347 (506)
Q Consensus 268 l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (506)
+++|+++++.+.++..+..+||||||+++++|.+++++|.+++++.+.++.+|+.++++|++.|+++|++.++|++||++
T Consensus 237 l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~ 316 (478)
T 1qdm_A 237 MGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQ 316 (478)
T ss_dssp ECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHH
T ss_pred EeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcc
Confidence 99999999987666678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccceecceeeeeecc---cccCCCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEec
Q 010616 348 IGLCAFNGAEYVSTGIKTVVEKE---NVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIID 424 (506)
Q Consensus 348 ~~~c~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 424 (506)
+|+|++++.+-.+.+++.+++++ +.+.++...|++||+++.|+|++|++++|+++|+.+++++|++++...|.|.+|
T Consensus 317 iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~ 396 (478)
T 1qdm_A 317 VGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVD 396 (478)
T ss_dssp TTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEEC
T ss_pred ccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEee
Confidence 99999999988888888888753 345667889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEe
Q 010616 425 CDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAE 504 (506)
Q Consensus 425 C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~ 504 (506)
|+.+..+|+|+|+|+|+.|+|+|++|+++..++....|+++|++.+++++.++.||||+.|||++|+|||++++|||||+
T Consensus 397 C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~ 476 (478)
T 1qdm_A 397 CGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAK 476 (478)
T ss_dssp GGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred cccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEe
Confidence 99888999999999999999999999998765545689999998887666678999999999999999999999999999
Q ss_pred cC
Q 010616 505 AA 506 (506)
Q Consensus 505 ~~ 506 (506)
++
T Consensus 477 a~ 478 (478)
T 1qdm_A 477 AA 478 (478)
T ss_dssp EC
T ss_pred CC
Confidence 86
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.6e-71 Score=572.82 Aligned_cols=367 Identities=39% Similarity=0.753 Sum_probs=325.8
Q ss_pred eEEEeeeeecCchhhhHHhhhhhHhhhccCCcccccccccCC---CCceeEeceecCCceEEEEEEecCCCceEEEEecC
Q 010616 28 LRRIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVRHRLGD---SDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDT 104 (506)
Q Consensus 28 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDT 104 (506)
++||||+|.++.|+.+.+.+.++++++. |++++..++.. .....+||.|+.|.+|+++|+||||||+|+|++||
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DT 77 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKT---HKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDT 77 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHH---CCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEET
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhh---hhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeC
Confidence 4799999999999999999988888763 33433322211 13567999999999999999999999999999999
Q ss_pred CCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEEEEEEEEEEEECcEEecccEEEEEEEeCCccc
Q 010616 105 GSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTF 184 (506)
Q Consensus 105 GSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~ 184 (506)
||+++||+|..|. +..|..++.|+|++|+||+..++.|.++|++|++.|.+++|+|++++..++++.||++....+..|
T Consensus 78 GSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~ 156 (370)
T 3psg_A 78 GSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFL 156 (370)
T ss_dssp TCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGG
T ss_pred CCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccccc
Confidence 9999999999996 668999999999999999999999999999999999999999999999999999999988776667
Q ss_pred cccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEecccccce
Q 010616 185 LLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYW 264 (506)
Q Consensus 185 ~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w 264 (506)
....++||||||++..+.....+++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.+.++|
T Consensus 157 ~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w 234 (370)
T 3psg_A 157 YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYW 234 (370)
T ss_dssp GGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTE
T ss_pred ccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeeccccccee
Confidence 77789999999999998888889999999999999999999999862 3489999999999999999999999999999
Q ss_pred EEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccc
Q 010616 265 QFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKV 344 (506)
Q Consensus 265 ~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~ 344 (506)
.|.+++|+++++.+. +..++.++|||||+++++|.+++++|.+++++.
T Consensus 235 ~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~------------------------------- 282 (370)
T 3psg_A 235 QITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS------------------------------- 282 (370)
T ss_dssp EEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE-------------------------------
T ss_pred EEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc-------------------------------
Confidence 999999999998775 567889999999999999999999999999765
Q ss_pred cccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEec
Q 010616 345 CQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIID 424 (506)
Q Consensus 345 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 424 (506)
+...|.|.+|
T Consensus 283 ----------------------------------------------------------------------~~~~g~~~v~ 292 (370)
T 3psg_A 283 ----------------------------------------------------------------------ENSDGEMVIS 292 (370)
T ss_dssp ----------------------------------------------------------------------ECTTCCEECC
T ss_pred ----------------------------------------------------------------------ccCCCcEEEE
Confidence 1235679999
Q ss_pred CCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEe
Q 010616 425 CDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAE 504 (506)
Q Consensus 425 C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~ 504 (506)
|+.+.++|+|+|+|+|++++|++++|+++ . .+.|+++|+..+.+.+.++.||||++|||++|+|||++++|||||+
T Consensus 293 C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~ 368 (370)
T 3psg_A 293 CSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAP 368 (370)
T ss_dssp GGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCCcccCCcEEEEECCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEE
Confidence 99888999999999999999999999998 2 2479999998876555566899999999999999999999999999
Q ss_pred cC
Q 010616 505 AA 506 (506)
Q Consensus 505 ~~ 506 (506)
||
T Consensus 369 a~ 370 (370)
T 3psg_A 369 VA 370 (370)
T ss_dssp BC
T ss_pred cC
Confidence 86
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.7e-70 Score=568.00 Aligned_cols=372 Identities=38% Similarity=0.770 Sum_probs=299.4
Q ss_pred CCeEEEeeeeecCchhhhHHhhh-hhHhhhccCCccc--ccccccCCCCceeEeceecCCceEEEEEEecCCCceEEEEe
Q 010616 26 NGLRRIGLKKRRLDLHSLNAARI-TRKERYMGGAGVS--GVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIF 102 (506)
Q Consensus 26 ~~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~l 102 (506)
++++||||+|+++.++.+.+.+. .+++++. +.. +...+. .....+||.|+.+.+|+++|+||||||+|.|++
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMARLGPE---WSQPMKRLTLG--NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHHHHHh---hcccccccccc--CCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 34789999999988887766665 4333321 110 110001 134568999999999999999999999999999
Q ss_pred cCCCCceEEeCCCCCC-CcccccCCCcCCCCCCCceecCceEEEEeCCCcEEEEEEEEEEEECcEEecccEEEEEEEeCC
Q 010616 103 DTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGS 181 (506)
Q Consensus 103 DTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~ 181 (506)
||||+++||+|..|.. +..|..|+.|+|++|+||+..++.|.++|++|+++|.+++|+|++|+..++ +.||++....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999962 358999999999999999999999999999999999999999999999999 99999998766
Q ss_pred ccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCC--CCcEEEECCCCCCCcccceEEEecc
Q 010616 182 LTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAE--EGGEIVFGGVDPKHFKGKHTYVPVT 259 (506)
Q Consensus 182 ~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~--~~G~L~fGgiD~~~~~G~l~~~pl~ 259 (506)
..|....+|||||||++..+.....|++++|++||+|++++||+||++..... .+|+|+|||+|+++|.|+++|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 55666788999999999998878889999999999999999999999864221 4899999999999999999999999
Q ss_pred cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCC
Q 010616 260 KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGL 339 (506)
Q Consensus 260 ~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~ 339 (506)
+.++|+|.+++|+++++.+. +..++.+||||||+++++|.+++++|.+++++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------- 292 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------- 292 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------
Confidence 99999999999999998753 567889999999999999999999999999765
Q ss_pred CCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCC
Q 010616 340 LPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMG 419 (506)
Q Consensus 340 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 419 (506)
+ ..|
T Consensus 293 ---------------------------------------------------------------------------~-~~g 296 (383)
T 2x0b_A 293 ---------------------------------------------------------------------------K-RLF 296 (383)
T ss_dssp ---------------------------------------------------------------------------E-CSS
T ss_pred ---------------------------------------------------------------------------c-cCC
Confidence 1 246
Q ss_pred ceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCe
Q 010616 420 ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLR 499 (506)
Q Consensus 420 ~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~r 499 (506)
.|.++|+.+..+|+|+|+|+|++|+|++++|+++..+.+...|+++|+..+.+.+.++.||||++|||++|+|||++++|
T Consensus 297 ~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~r 376 (383)
T 2x0b_A 297 DYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNR 376 (383)
T ss_dssp CEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTE
T ss_pred cEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCE
Confidence 78899998889999999999999999999999986654456899999988765556679999999999999999999999
Q ss_pred EEEEecC
Q 010616 500 IGFAEAA 506 (506)
Q Consensus 500 IGfA~~~ 506 (506)
||||+++
T Consensus 377 IGfA~a~ 383 (383)
T 2x0b_A 377 IGFALAR 383 (383)
T ss_dssp EEEEEEC
T ss_pred EeEEEcC
Confidence 9999986
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-64 Score=517.88 Aligned_cols=331 Identities=47% Similarity=0.885 Sum_probs=293.4
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc
Q 010616 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (506)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs 151 (506)
...+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 3458899999999999999999999999999999999999999996 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCC
Q 010616 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (506)
Q Consensus 152 ~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~ 231 (506)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||+|.+++||+||++..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998776655666778999999999888777889999999999999999999999874
Q ss_pred CCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhC
Q 010616 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 311 (506)
Q Consensus 232 ~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~ 311 (506)
....+|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~ 249 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 249 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhC
Confidence 333489999999999999999999999999999999999999998753 5677899999999999999999999999986
Q ss_pred CCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHH
Q 010616 312 GEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQ 391 (506)
Q Consensus 312 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (506)
+.
T Consensus 250 ~~------------------------------------------------------------------------------ 251 (351)
T 1tzs_A 250 AA------------------------------------------------------------------------------ 251 (351)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccC
Q 010616 392 NQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDL 471 (506)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~ 471 (506)
+.. +.|.++|+.+..+|+|+|+|+|++++|++++|+++..+.+...|+++|+..+.
T Consensus 252 -----------------------~~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~ 307 (351)
T 1tzs_A 252 -----------------------PVD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDI 307 (351)
T ss_dssp -----------------------ECS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEECCC
T ss_pred -----------------------ccC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCC
Confidence 011 66889999888899999999999999999999997654334689999988765
Q ss_pred CCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 472 PPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 472 ~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 308 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 308 HPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp CTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 44456789999999999999999999999999985
No 5
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.2e-64 Score=514.40 Aligned_cols=332 Identities=41% Similarity=0.867 Sum_probs=297.8
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCC-CcccccCCCcCCCCCCCceecCceEEEEeCC
Q 010616 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGS 149 (506)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~ 149 (506)
+...+||+|+.+..|+++|+||||||+++|++||||+++||+|..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 567899999999999999999999999999999999999999999963 3479899999999999999999999999999
Q ss_pred CcEEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecC
Q 010616 150 GSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNR 229 (506)
Q Consensus 150 Gs~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~ 229 (506)
|++.|.+++|+|++++..+ ++.||++.......|.....+||||||++..+.....+++++|++||+|.+++||+||++
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998766445667789999999999887778899999999999999999999998
Q ss_pred CC--CCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHH
Q 010616 230 DP--DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEIN 307 (506)
Q Consensus 230 ~~--~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~ 307 (506)
.. ....+|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|++++..+. +..+..++|||||+++++|.+++++|.
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223489999999999999999999999999999999999999998753 456789999999999999999999999
Q ss_pred HHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHH
Q 010616 308 HAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAV 387 (506)
Q Consensus 308 ~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (506)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9997650
Q ss_pred HHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeee
Q 010616 388 VWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFM 467 (506)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~ 467 (506)
...| |.+||+....+|+|+|+|+|++++|++++|+++....+...|+++|.
T Consensus 251 ----------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~~i~ 301 (341)
T 3k1w_A 251 ----------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIH 301 (341)
T ss_dssp ----------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEBSEE
T ss_pred ----------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEeEEE
Confidence 1135 89999988889999999999999999999999766544578999999
Q ss_pred eccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 468 AFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 468 ~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
..+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 302 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 302 AMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp ECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 876555556789999999999999999999999999986
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=7.9e-64 Score=508.94 Aligned_cols=321 Identities=41% Similarity=0.799 Sum_probs=289.9
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc
Q 010616 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (506)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs 151 (506)
...+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCC
Q 010616 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (506)
Q Consensus 152 ~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~ 231 (506)
+.|.+++|+|++++..++++.|||+....+..|.....+||||||++..+.....+++++|++||.|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876544555678999999999988878889999999999999999999998863
Q ss_pred CCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhC
Q 010616 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 311 (506)
Q Consensus 232 ~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~ 311 (506)
. .|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 39999999999999999999999999999999999999998774 4567899999999999999999999999986
Q ss_pred CCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHH
Q 010616 312 GEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQ 391 (506)
Q Consensus 312 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (506)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 540
Q ss_pred HHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccC
Q 010616 392 NQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDL 471 (506)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~ 471 (506)
...+.|.++|+.+..+|+|+|+|+|++++|++++|+++ ....|+++|+..+
T Consensus 241 ------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~~~- 291 (323)
T 3cms_A 241 ------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQSEN- 291 (323)
T ss_dssp ------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEC--
T ss_pred ------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEeCC-
Confidence 12467889999888999999999999999999999998 2358999898653
Q ss_pred CCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 472 PPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 472 ~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
.++.||||++|||++|+|||++++|||||+++
T Consensus 292 ---~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 292 ---HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp -----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 34689999999999999999999999999986
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=9.2e-64 Score=509.67 Aligned_cols=326 Identities=40% Similarity=0.811 Sum_probs=292.9
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcE
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~ 152 (506)
..+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999997 4579989999999999999999999999999999
Q ss_pred EEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCC
Q 010616 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPD 232 (506)
Q Consensus 153 ~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~ 232 (506)
.|.+++|+|++++..++++.||+++...+..|.....+||||||++..+.....+++++|++||+|++++||+||++...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998765345566789999999998887777889999999999999999999987531
Q ss_pred -CCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhC
Q 010616 233 -AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 311 (506)
Q Consensus 233 -~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~ 311 (506)
...+|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+. ..+..++|||||+++++|.+++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 23479999999999999999999999999999999999999998764 357889999999999999999999999986
Q ss_pred CCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHH
Q 010616 312 GEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQ 391 (506)
Q Consensus 312 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (506)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccC
Q 010616 392 NQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDL 471 (506)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~ 471 (506)
....+.|.++|+....+|+|+|+|+|++++|++++|+++.. ..|+++|+..+.
T Consensus 242 -----------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~~~~ 294 (329)
T 1dpj_A 242 -----------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITPMDF 294 (329)
T ss_dssp -----------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEECCC
T ss_pred -----------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEeccc
Confidence 12246788999988889999999999999999999999753 489999988765
Q ss_pred CCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 472 PPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 472 ~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 295 ~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 295 PEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 44456789999999999999999999999999986
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.5e-64 Score=508.71 Aligned_cols=319 Identities=42% Similarity=0.811 Sum_probs=285.6
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEE
Q 010616 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (506)
Q Consensus 74 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~ 153 (506)
.+||+|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47899999999999999999999999999999999999999997 56899999999999999999999999999999999
Q ss_pred EEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010616 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (506)
Q Consensus 154 G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~ 233 (506)
|.+++|+|++++..++++.||++....+..|.....+||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566667899999999998887788999999999999999999999985
Q ss_pred CCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCC
Q 010616 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 313 (506)
Q Consensus 234 ~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~ 313 (506)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|+++++.+. +..+..++|||||+++++|.+++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 446789999999999999999999999998654
Q ss_pred ccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHH
Q 010616 314 GVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQ 393 (506)
Q Consensus 314 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (506)
T Consensus 237 -------------------------------------------------------------------------------- 236 (320)
T 4aa9_A 237 -------------------------------------------------------------------------------- 236 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCC
Q 010616 394 LKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 473 (506)
Q Consensus 394 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~ 473 (506)
....+.|.+||+....+|+|+|+|+|++++|++++|+.+ ....|+++|+..
T Consensus 237 ---------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~---- 287 (320)
T 4aa9_A 237 ---------------------ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD---- 287 (320)
T ss_dssp ---------------------ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE----
T ss_pred ---------------------ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC----
Confidence 112467899999888899999999999999999999976 235899988763
Q ss_pred CCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 474 PRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 474 ~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+.++.||||++|||++|+|||++++|||||+||
T Consensus 288 ~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 234679999999999999999999999999986
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-63 Score=505.80 Aligned_cols=322 Identities=41% Similarity=0.781 Sum_probs=291.4
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEE
Q 010616 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (506)
Q Consensus 74 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~ 153 (506)
.+||+|+.+..|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.++|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 56799999999999999999999999999999999
Q ss_pred EEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010616 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (506)
Q Consensus 154 G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~ 233 (506)
|.+++|+|++++..++++.|||+....+..|.....+||||||++..+.....+++++|++||+|.+++||+||++..
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-- 159 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG-- 159 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--
Confidence 999999999999999999999999876655656778999999999888777788999999999999999999998863
Q ss_pred CCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCC
Q 010616 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 313 (506)
Q Consensus 234 ~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~ 313 (506)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+. +++ ..++|||||+++++|.+++++|.+++++.
T Consensus 160 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999989999999999999998763 333 88999999999999999999999988542
Q ss_pred ccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHH
Q 010616 314 GVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQ 393 (506)
Q Consensus 314 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (506)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCC
Q 010616 394 LKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 473 (506)
Q Consensus 394 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~ 473 (506)
...|.|.++|+.+.++|+|+|+|+|++++|++++|+++. ...|+++|+..+.+.
T Consensus 238 ----------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~~~~ 291 (324)
T 1am5_A 238 ----------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSGVPS 291 (324)
T ss_dssp ----------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECCSCC
T ss_pred ----------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECccCC
Confidence 013568899998889999999999999999999999975 358999998876544
Q ss_pred CCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 474 PRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 474 ~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+.++.||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 292 NTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 456789999999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.6e-63 Score=507.88 Aligned_cols=325 Identities=43% Similarity=0.832 Sum_probs=292.1
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEE
Q 010616 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (506)
Q Consensus 74 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~ 153 (506)
.+||+ +.+..|+++|.||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.++|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999996 45799999999999999999999999999999999
Q ss_pred EEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010616 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (506)
Q Consensus 154 G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~ 233 (506)
|.+++|+|++++..++++.|||+....+..|.....+||||||++..+.....+++++|++||+|.+++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~- 160 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG- 160 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-
Confidence 9999999999999999999999987766556667789999999999887778899999999999999999999988632
Q ss_pred CCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCC
Q 010616 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 313 (506)
Q Consensus 234 ~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~ 313 (506)
..+|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+..+..+..++|||||+++++|.+++++|.+++++.
T Consensus 161 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 161 SSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp SEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 23799999999999999999999999999999999999999987643456789999999999999999999999998754
Q ss_pred ccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHH
Q 010616 314 GVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQ 393 (506)
Q Consensus 314 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (506)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCC
Q 010616 394 LKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 473 (506)
Q Consensus 394 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~ 473 (506)
...+.|.++|+.+..+|+|+|+|+|++++|++++|+++.. +.|+++|+..+.+.
T Consensus 242 ----------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~~~~ 295 (329)
T 1htr_B 242 ----------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTYLSS 295 (329)
T ss_dssp ----------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEECCCC
T ss_pred ----------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECCCCC
Confidence 1235688999987889999999999999999999999754 38999998876544
Q ss_pred CCCC-ceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 474 PRGP-LWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 474 ~~~~-~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+.++ .||||++|||++|+|||++++|||||+++
T Consensus 296 ~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 296 QNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp TTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 4556 89999999999999999999999999986
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.5e-62 Score=509.10 Aligned_cols=321 Identities=33% Similarity=0.648 Sum_probs=288.4
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCC
Q 010616 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (506)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~G 150 (506)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 44568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred cEEEEEEEEEEEECcEEecccEEEEEEE----eCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEE
Q 010616 151 SISGFFSQDNVEVGDVVVKDQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFW 226 (506)
Q Consensus 151 s~~G~~~~Dtv~~gg~~~~~~~Fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 226 (506)
++.|.+++|+|++|+..+++ .|||+.. .. .|.....+||||||++..+.....+++++|++||+|.+++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999998 43 45556789999999999888788899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHH
Q 010616 227 LNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEI 306 (506)
Q Consensus 227 L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i 306 (506)
|.+.. ..+|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |+++++.+ .+..++|||||+++++|.+++++|
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 99863 258999999999999999999999999999999999 99999876 457899999999999999999999
Q ss_pred HHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhH
Q 010616 307 NHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMA 386 (506)
Q Consensus 307 ~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (506)
.+++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99997530
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeee
Q 010616 387 VVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGF 466 (506)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~ 466 (506)
+...|.|.++|+. ..+|+|+|+|+|++++|+|++|+++....+...|+++|
T Consensus 287 ----------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~ 337 (375)
T 1miq_A 287 ----------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITM 337 (375)
T ss_dssp ----------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESE
T ss_pred ----------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 1235678999997 78999999999999999999999986543446899999
Q ss_pred eeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 467 MAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 467 ~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 338 ~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 338 LPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 876531 2689999999999999999999999999985
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=3.3e-62 Score=516.38 Aligned_cols=321 Identities=30% Similarity=0.557 Sum_probs=289.2
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCC
Q 010616 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (506)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~G 150 (506)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.++|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 56778999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred cEEEEEEEEEEEECcEEecccEEEEEEE----eCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEE
Q 010616 151 SISGFFSQDNVEVGDVVVKDQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFW 226 (506)
Q Consensus 151 s~~G~~~~Dtv~~gg~~~~~~~Fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 226 (506)
++.|.+++|+|++|+..++ +.||++.. .++ |.....+||||||++..+.....+++++|++||+|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999987 443 5556789999999999887778899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHH
Q 010616 227 LNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEI 306 (506)
Q Consensus 227 L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i 306 (506)
|++.. ..+|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |++++. +..+..++|||||+++++|.+++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 348999999999999999999999999999999999 999998 34577899999999999999999999
Q ss_pred HHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhH
Q 010616 307 NHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMA 386 (506)
Q Consensus 307 ~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (506)
.+++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99886540
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeee
Q 010616 387 VVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGF 466 (506)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~ 466 (506)
....|.|.+||+ +..+|+|+|+|+|.+++|+|++|+++..+.+...|+++|
T Consensus 362 ----------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i 412 (451)
T 3qvc_A 362 ----------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNI 412 (451)
T ss_dssp ----------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECE
T ss_pred ----------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEE
Confidence 112577999999 788999999999999999999999987654557899999
Q ss_pred eeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 467 MAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 467 ~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+..+.+ ++.||||++|||++|+|||++++|||||+++
T Consensus 413 ~~~~~~---~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 413 VPIDLE---KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EECCCS---TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 876421 5689999999999999999999999999986
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=8.1e-62 Score=513.00 Aligned_cols=322 Identities=33% Similarity=0.628 Sum_probs=288.1
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCC
Q 010616 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (506)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~G 150 (506)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.++|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred cEEEEEEEEEEEECcEEecccEEEEEEEeC--CccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEec
Q 010616 151 SISGFFSQDNVEVGDVVVKDQVFIEATREG--SLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 228 (506)
Q Consensus 151 s~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~--~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~ 228 (506)
++.|.+++|+|++|+..++ +.|||+.... +..|.....+||||||++..+.....|++++|++||+|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544556678999999999988877889999999999999999999999
Q ss_pred CCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHH
Q 010616 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 308 (506)
Q Consensus 229 ~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~ 308 (506)
+.+ ..+|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |++++ .+ + .+..++|||||+++++|.+++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 3 56789999999999999999999988
Q ss_pred HhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHH
Q 010616 309 AIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVV 388 (506)
Q Consensus 309 ~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (506)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 77543
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhccCCCCCCC-ceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeee
Q 010616 389 WVQNQLKQKQTKEKVLSYINELCDSLPNPMG-ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFM 467 (506)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~ 467 (506)
+...| .|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|+++|+
T Consensus 362 --------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~ 414 (453)
T 2bju_A 362 --------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNII 414 (453)
T ss_dssp --------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEE
T ss_pred --------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEE
Confidence 11235 68899997 789999999999999999999999865434568999998
Q ss_pred eccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 468 AFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 468 ~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
..+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 415 ~~~~---~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 415 GLDF---PVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp ECCC---SSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eCCC---CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7652 13489999999999999999999999999985
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.2e-61 Score=491.15 Aligned_cols=318 Identities=30% Similarity=0.521 Sum_probs=284.4
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCccc--ccCCCcCCCCCCCceecCceEEEEeCC
Q 010616 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISC--YFHSRYKSRKSNTYTEIGKSCEINYGS 149 (506)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C--~~~~~f~~~~SsT~~~~~~~~~~~Y~~ 149 (506)
...++|.|+.+..|+++|+|| ||+++|++||||+++||+|..|. +..| ..++.|+|++| ||+..++.|.++|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 345789999999999999999 89999999999999999999996 5689 88999999999 999999999999999
Q ss_pred CcEEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccc-cCCCCchHHHHHHcCCCCCceEEEEec
Q 010616 150 GSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIA-VGDAVPVWDNMVEQGLVSEEVFSFWLN 228 (506)
Q Consensus 150 Gs~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s-~~~~~~~~~~L~~qg~i~~~~FSl~L~ 228 (506)
|++.|.+++|+|++++..++++.||++... +..|....++||||||++..+ .....+++++|++||+| +++||+||+
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999987 434556678999999999887 66778899999999999 999999999
Q ss_pred CCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHH
Q 010616 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 308 (506)
Q Consensus 229 ~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~ 308 (506)
+..+....|+|+|||+|+++|+|++.|+|+.+.++|.|.+++|+++++.+. ..+..++|||||+++++|.+++++|.+
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 864333479999999999999999999999999999999999999998764 567889999999999999999999999
Q ss_pred HhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHH
Q 010616 309 AIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVV 388 (506)
Q Consensus 309 ~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (506)
++++..
T Consensus 238 ~~~~~~-------------------------------------------------------------------------- 243 (330)
T 1yg9_A 238 AIGCVV-------------------------------------------------------------------------- 243 (330)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 997640
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhccCCCCCCC--ce-EecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEee
Q 010616 389 WVQNQLKQKQTKEKVLSYINELCDSLPNPMG--ES-IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISG 465 (506)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~ 465 (506)
...| .| .+||+.+..+|+|+|+|+|++++|++++|+++. ...|+++
T Consensus 244 ---------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C~~~ 292 (330)
T 1yg9_A 244 ---------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLCYSG 292 (330)
T ss_dssp ---------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEEEES
T ss_pred ---------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcEEEE
Confidence 0124 67 899998778999999999999999999999976 3589998
Q ss_pred eeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 466 FMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 466 ~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
|+.. +.++.||||++|||++|+|||++++|||||+++
T Consensus 293 i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 293 FQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 8864 234689999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.1e-61 Score=495.52 Aligned_cols=326 Identities=27% Similarity=0.487 Sum_probs=287.9
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCC
Q 010616 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (506)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~G 150 (506)
....+||.|+.+..|+++|+||||||++.|+|||||+++||+|..|..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 45568999999999999999999999999999999999999999995235799999999999999999999999999999
Q ss_pred cEEEEEEEEEEEECcEEecccEEEEEEEeCC-----ccccccceeeeeeccccccccCC------CCchHHHHHHcCCCC
Q 010616 151 SISGFFSQDNVEVGDVVVKDQVFIEATREGS-----LTFLLARFDGIIGLGFREIAVGD------AVPVWDNMVEQGLVS 219 (506)
Q Consensus 151 s~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~-----~~~~~~~~dGIlGLg~~~~s~~~------~~~~~~~L~~qg~i~ 219 (506)
++.|.+++|+|++++..++++.|||+....+ ..|.....+||||||++..+... ..+++++|++||+|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34556678999999998877543 788999999999999
Q ss_pred CceEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEeccccc----ceEEEEceEEECCeeeeeecCCceEE-EcCCCC
Q 010616 220 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKG----YWQFELGDILIGNQSTGVCEGGCAAI-VDSGTS 294 (506)
Q Consensus 220 ~~~FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~----~w~v~l~~i~v~g~~~~~~~~~~~~i-vDtgt~ 294 (506)
+++||+||.+. ...|+|+|||+|+++|.|++.|+|+.+.. +|.|.+++|+++++.+. +..+..+| |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23899999999999999999999998765 99999999999998764 34567899 999999
Q ss_pred CeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccC
Q 010616 295 LLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSA 374 (506)
Q Consensus 295 ~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 374 (506)
++++|.+++++|.+++++..
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~------------------------------------------------------------ 261 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDA------------------------------------------------------------ 261 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTC------------------------------------------------------------
T ss_pred ceeCCHHHHHHHHHHhCCcc------------------------------------------------------------
Confidence 99999999999999997640
Q ss_pred CCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCC-CcEEEEE--C-----CEEEEEC
Q 010616 375 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTM-PNVSFTI--G-----DKIFNLS 446 (506)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~-P~l~f~~--g-----g~~~~l~ 446 (506)
+...+.|.++|+.+..+ |+|+|+| + |.+++|+
T Consensus 262 ----------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~~i~ 301 (361)
T 1mpp_A 262 ----------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVP 301 (361)
T ss_dssp ----------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEE
T ss_pred ----------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEEEEC
Confidence 11246688999977788 9999999 8 8999999
Q ss_pred cccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 447 PEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 447 ~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+++|+++... +...|+++|+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 302 ~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 302 ISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp GGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 9999997543 245899888864 23579999999999999999999999999985
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.8e-59 Score=473.04 Aligned_cols=311 Identities=33% Similarity=0.620 Sum_probs=272.1
Q ss_pred ecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc-EEEEEE
Q 010616 79 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFS 157 (506)
Q Consensus 79 n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs-~~G~~~ 157 (506)
+..+..|+++|+||||||++.|++||||+++||+|..|..+ |..++.|+|++|+||+..++.|.++|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999844 778899999999999999999999999998 799999
Q ss_pred EEEEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc-CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010616 158 QDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV-GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (506)
Q Consensus 158 ~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~-~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~ 236 (506)
+|+|++++..++++.||++...+.. |.....+||||||++..+. ....+++++|++||+|.+++||+||.+.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999887553 4445589999999988764 35678999999999999999999997642 2248
Q ss_pred cEEEECCCCCCCcccceEEEecc-cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCcc
Q 010616 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGV 315 (506)
Q Consensus 237 G~L~fGgiD~~~~~G~l~~~pl~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~ 315 (506)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|++++ .+ +..+..++|||||+++++|+++++++.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~-- 241 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGAS-- 241 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCE--
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcc--
Confidence 99999999999999999999996 4789999999999999 33 456789999999999999999999999988654
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhh
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLK 395 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (506)
.
T Consensus 242 -------------------------------------~------------------------------------------ 242 (325)
T 2apr_A 242 -------------------------------------D------------------------------------------ 242 (325)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred hhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCC
Q 010616 396 QKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPR 475 (506)
Q Consensus 396 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~ 475 (506)
+. .+.|.++|+. ..+|+|+|+|+|.+++|++++|+++.. ...|+..|+..+
T Consensus 243 -------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~----- 293 (325)
T 2apr_A 243 -------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN----- 293 (325)
T ss_dssp -------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES-----
T ss_pred -------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC-----
Confidence 11 1568899984 348999999998899999999998654 368999887543
Q ss_pred CCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 476 GPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 476 ~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
++.||||++|||++|+|||++++|||||+++
T Consensus 294 ~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4579999999999999999999999999986
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.4e-58 Score=471.39 Aligned_cols=313 Identities=29% Similarity=0.459 Sum_probs=270.4
Q ss_pred ecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCcee-cCceEEEEeCCCc-EEEEE
Q 010616 79 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTE-IGKSCEINYGSGS-ISGFF 156 (506)
Q Consensus 79 n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Y~~Gs-~~G~~ 156 (506)
.+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.++|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 346789999999999999999999999999999999997 34566789999999999998 6899999999999 79999
Q ss_pred EEEEEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010616 157 SQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (506)
Q Consensus 157 ~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~ 233 (506)
++|+|++++..++++.||++...++..+.....+||||||++..+. ....+++++|+++ |.+++||+||++.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998765333335789999999988765 2467899999986 8899999999874
Q ss_pred CCCcEEEECCCCCCCcccceEEEecc-cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCC
Q 010616 234 EEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 312 (506)
Q Consensus 234 ~~~G~L~fGgiD~~~~~G~l~~~pl~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~ 312 (506)
..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+++++.+ +..+..++|||||+++++|.+++++|.+++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999997 5789999999999999865 35678999999999999999999999888744
Q ss_pred CccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHH
Q 010616 313 EGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQN 392 (506)
Q Consensus 313 ~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (506)
.. +
T Consensus 242 a~--------------------------------------~--------------------------------------- 244 (329)
T 3c9x_A 242 AQ--------------------------------------Y--------------------------------------- 244 (329)
T ss_dssp CE--------------------------------------E---------------------------------------
T ss_pred cE--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCC
Q 010616 393 QLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP 472 (506)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 472 (506)
....+.|.++|+ ..+|.|+|+|+|++++|++++|+++..+.+...|+++|+..+
T Consensus 245 ----------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~-- 298 (329)
T 3c9x_A 245 ----------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSS-- 298 (329)
T ss_dssp ----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECT--
T ss_pred ----------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCC--
Confidence 012467889999 579999999999999999999998754433468999887542
Q ss_pred CCCCCceEeCHHhhcceEEEEeCCCCeEEEEec
Q 010616 473 PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 505 (506)
Q Consensus 473 ~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~ 505 (506)
..+.||||++|||++|+|||++++|||||+.
T Consensus 299 --~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 299 --GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp --TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred --CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 3468999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.2e-58 Score=470.06 Aligned_cols=310 Identities=28% Similarity=0.457 Sum_probs=267.5
Q ss_pred CCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCcee-cCceEEEEeCCCc-EEEEEEE
Q 010616 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTE-IGKSCEINYGSGS-ISGFFSQ 158 (506)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Y~~Gs-~~G~~~~ 158 (506)
.+..|+++|+||||||++.|++||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.++|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5788999999999999999999999999999999997 3356 788999999999998 6889999999998 7999999
Q ss_pred EEEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCC
Q 010616 159 DNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEE 235 (506)
Q Consensus 159 Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~ 235 (506)
|+|++++..++++.||++...++..+.....+||||||++..+. ....+++++|+++ |.+++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998765333335789999999988775 2467899999987 8899999999874 2
Q ss_pred CcEEEECCCCCCCcccceEEEecc-cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCc
Q 010616 236 GGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEG 314 (506)
Q Consensus 236 ~G~L~fGgiD~~~~~G~l~~~pl~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~ 314 (506)
.|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+++++.+. ..+..++|||||+++++|.+++++|.+++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 899999999999999999999997 57899999999999998653 456789999999999999999999998874330
Q ss_pred cccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHh
Q 010616 315 VVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQL 394 (506)
Q Consensus 315 ~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (506)
+
T Consensus 243 --------------------------------------~----------------------------------------- 243 (329)
T 1oew_A 243 --------------------------------------S----------------------------------------- 243 (329)
T ss_dssp --------------------------------------E-----------------------------------------
T ss_pred --------------------------------------E-----------------------------------------
Confidence 0
Q ss_pred hhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCC
Q 010616 395 KQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 474 (506)
Q Consensus 395 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~ 474 (506)
....+.|.++|+ ..+|+|+|+|+|++++|++++|+++....+...|+++|+..+
T Consensus 244 --------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~---- 297 (329)
T 1oew_A 244 --------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA---- 297 (329)
T ss_dssp --------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST----
T ss_pred --------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC----
Confidence 012467889999 579999999999999999999998754333468999887542
Q ss_pred CCCceEeCHHhhcceEEEEeC-CCCeEEEEec
Q 010616 475 RGPLWILGDVFMGVYHTVFDS-GKLRIGFAEA 505 (506)
Q Consensus 475 ~~~~~ilG~~fl~~~y~vfD~-~~~rIGfA~~ 505 (506)
.++.||||++|||++|+|||+ +++|||||++
T Consensus 298 ~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 298 GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 346899999999999999999 9999999984
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.1e-57 Score=464.46 Aligned_cols=313 Identities=26% Similarity=0.447 Sum_probs=272.8
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCC--CCCCcccccCCCcCCCCCCCceecCceEEEEeCCC
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK--CYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~--C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~G 150 (506)
-.+||.|. +..|+++|+||||||++.|++||||+++||++.. |..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 35788776 6789999999999999999999999999999654 65445899999999999999999999999999999
Q ss_pred -cEEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc----------CCCCchHHHHHHcCCCC
Q 010616 151 -SISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV----------GDAVPVWDNMVEQGLVS 219 (506)
Q Consensus 151 -s~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~----------~~~~~~~~~L~~qg~i~ 219 (506)
.+.|.+++|+|+|++..++++.||++..... .+||||||++..+. ....+++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987653 48999999988753 23456999999999999
Q ss_pred CceEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeC
Q 010616 220 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGP 299 (506)
Q Consensus 220 ~~~FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp 299 (506)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|+++++.+.. +..++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 34899999999999999999999999989999999999999998753 3679999999999999
Q ss_pred HHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCccc
Q 010616 300 TPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAV 379 (506)
Q Consensus 300 ~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (506)
.+++++|.+++++.. +
T Consensus 230 ~~~~~~i~~~~~~~~---------------------------------------~------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARL---------------------------------------V------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEE---------------------------------------E-------------------------
T ss_pred HHHHHHHHHHcCCEE---------------------------------------c-------------------------
Confidence 999999999997650 0
Q ss_pred chhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEE-CCEEEEECcccceeeeccCc
Q 010616 380 CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTGEGI 458 (506)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~-gg~~~~l~~~~yi~~~~~~~ 458 (506)
..+...+.|.+||+. ..+|.|+|+| +|++++|++++|+++...
T Consensus 246 ---------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~~-- 289 (339)
T 3fv3_A 246 ---------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNGD-- 289 (339)
T ss_dssp ---------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECSS--
T ss_pred ---------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCCC--
Confidence 000124668899996 4689999999 589999999999987532
Q ss_pred cceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 459 AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 459 ~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
..|.++|.. .+.||||++|||++|+|||++++|||||+++
T Consensus 290 -~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 290 -GTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp -SCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 479998875 2469999999999999999999999999985
No 20
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=4.3e-57 Score=459.72 Aligned_cols=309 Identities=29% Similarity=0.451 Sum_probs=267.8
Q ss_pred CCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc-EEEEEEEE
Q 010616 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (506)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs-~~G~~~~D 159 (506)
.+..|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999997 3457788999999999 7777899999999998 79999999
Q ss_pred EEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010616 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (506)
Q Consensus 160 tv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~ 236 (506)
+|++++..++++.||++....+..+.....+||||||++..+. ....+++++|+++ +.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765333335789999999988775 3567899999987 8899999999874 28
Q ss_pred cEEEECCCCCCCcccceEEEecc-cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCcc
Q 010616 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGV 315 (506)
Q Consensus 237 G~L~fGgiD~~~~~G~l~~~pl~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~ 315 (506)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+++++.+ +..+..+||||||+++++|.+++++|.+++.+..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~- 238 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ- 238 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999997 5789999999999999865 3567899999999999999999999999884320
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhh
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLK 395 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (506)
+
T Consensus 239 -------------------------------------~------------------------------------------ 239 (325)
T 1ibq_A 239 -------------------------------------E------------------------------------------ 239 (325)
T ss_dssp -------------------------------------C------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred hhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCC
Q 010616 396 QKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPR 475 (506)
Q Consensus 396 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~ 475 (506)
....+.|.+||+ ..+|+|+|+|+|++++|++++|+++..+.+...|+++|+..+ .
T Consensus 240 -------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~----~ 294 (325)
T 1ibq_A 240 -------------------SYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS----G 294 (325)
T ss_dssp -------------------CSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT----T
T ss_pred -------------------cCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC----C
Confidence 112466889999 579999999999999999999998754323468999887542 3
Q ss_pred CCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 476 GPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 476 ~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
++.||||++|||++|+|||++++|||||++|
T Consensus 295 ~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 295 LGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 4689999999999999999999999999986
No 21
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.8e-57 Score=462.53 Aligned_cols=314 Identities=26% Similarity=0.441 Sum_probs=270.8
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCC--CCCC------CcccccCCCcCCCCCCCceecCceEE
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS--KCYF------SISCYFHSRYKSRKSNTYTEIGKSCE 144 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 144 (506)
..++|.| .+..|+++|+||||||++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 5789999999999999999999999999999866 6752 24788899999999999999999999
Q ss_pred EEeCCCc-EEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccC--CCCchHHHHHHcCCCCCc
Q 010616 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEE 221 (506)
Q Consensus 145 ~~Y~~Gs-~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~ 221 (506)
++|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+.. ...+++.+|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998753 4589999999877542 345799999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 222 VFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 222 ~FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
+||+||++.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+++++.+. .+..++|||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 3489999999999999999999999998999999999999998775 3467999999999999999
Q ss_pred HHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccch
Q 010616 302 VVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCS 381 (506)
Q Consensus 302 ~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (506)
++++|.+++++... ++
T Consensus 230 ~~~~l~~~~~~~~~-------------------------------------~~--------------------------- 245 (342)
T 2qzx_A 230 IVRNILYAIGAQMK-------------------------------------FD--------------------------- 245 (342)
T ss_dssp HHHHHHHHHTCEEE-------------------------------------EC---------------------------
T ss_pred HHHHHHHHhCCeee-------------------------------------ec---------------------------
Confidence 99999999976510 00
Q ss_pred hhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEE-CCEEEEECcccceeeec---cC
Q 010616 382 ACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTG---EG 457 (506)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~-gg~~~~l~~~~yi~~~~---~~ 457 (506)
+...+.|.++|+ .+|.|+|+| +|++++|++++|+++.. ..
T Consensus 246 ---------------------------------~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~ 289 (342)
T 2qzx_A 246 ---------------------------------SAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYYTSGK 289 (342)
T ss_dssp ---------------------------------TTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBCTTSC
T ss_pred ---------------------------------cCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhcccccccCCC
Confidence 111236889998 489999999 79999999999998743 12
Q ss_pred ccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 458 IAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 458 ~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
....|++.|... +.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 290 PFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp BCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 235799988753 259999999999999999999999999985
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=5.8e-57 Score=458.42 Aligned_cols=306 Identities=29% Similarity=0.446 Sum_probs=266.5
Q ss_pred CCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc-EEEEEEEE
Q 010616 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (506)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs-~~G~~~~D 159 (506)
.+..|+++|+|| ||+++|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 578999999999 79999999999999999999997 4467788999999999 7777899999999999 79999999
Q ss_pred EEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010616 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (506)
Q Consensus 160 tv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~ 236 (506)
+|++++..++++.||+++..++..+.....+||||||++..+. ....+++++|+++ +.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998765333335789999999998775 3567899999987 8899999999874 28
Q ss_pred cEEEECCCCCCCcccceEEEecc-cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCcc
Q 010616 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGV 315 (506)
Q Consensus 237 G~L~fGgiD~~~~~G~l~~~pl~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~ 315 (506)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|++++ .+ +..+..++|||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~- 238 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS- 238 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE-
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE-
Confidence 99999999999999999999996 6789999999999999 43 5678899999999999999999999998884330
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhh
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLK 395 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (506)
+
T Consensus 239 -------------------------------------~------------------------------------------ 239 (323)
T 1izd_A 239 -------------------------------------Y------------------------------------------ 239 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred hhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCC
Q 010616 396 QKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPR 475 (506)
Q Consensus 396 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~ 475 (506)
....+.|.+||+ ..+|+|+|+|+|++++|++++|+++... ...|+++|+..+ .
T Consensus 240 -------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~--~~~C~~~i~~~~----~ 292 (323)
T 1izd_A 240 -------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADVG--NGQTFGGIQSNS----G 292 (323)
T ss_dssp -------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEECS--TTEEEESEEECT----T
T ss_pred -------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecCC--CCeEEEEEEcCC----C
Confidence 012467899999 5799999999999999999999987532 468999887642 3
Q ss_pred CCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 476 GPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 476 ~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
++.||||++|||++|+|||++++|||||++|
T Consensus 293 ~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 293 IGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp TSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 4689999999999999999999999999986
No 23
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=5e-57 Score=460.92 Aligned_cols=309 Identities=26% Similarity=0.420 Sum_probs=270.1
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCC--CCCC------CcccccCCCcCCCCCCCceecCceEE
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS--KCYF------SISCYFHSRYKSRKSNTYTEIGKSCE 144 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 144 (506)
..++|.|. +..|+++|+||||||++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999876 6752 23798899999999999999999999
Q ss_pred EEeCCCc-EEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc--CCCCchHHHHHHcCCCCCc
Q 010616 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEE 221 (506)
Q Consensus 145 ~~Y~~Gs-~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~ 221 (506)
++|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+. ....+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998753 458999999987654 2456799999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 222 VFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 222 ~FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
+||+||++.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+++++.+. .+..++|||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3489999999999999999999999998999999999999998875 3467999999999999999
Q ss_pred HHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccch
Q 010616 302 VVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCS 381 (506)
Q Consensus 302 ~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (506)
++++|.+++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999997650
Q ss_pred hhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceE-ecCCCCCCCCcEEEEE-CCEEEEECcccceeeeccCcc
Q 010616 382 ACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESI-IDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTGEGIA 459 (506)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~~C~~~~~~P~l~f~~-gg~~~~l~~~~yi~~~~~~~~ 459 (506)
+...+.|. ++|+ .+|.|+|+| +|++++|++++|+++..++
T Consensus 243 ---------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~~~-- 284 (334)
T 1j71_A 243 ---------------------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDSDS-- 284 (334)
T ss_dssp ---------------------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECSSS--
T ss_pred ---------------------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecCCC--
Confidence 01124677 8998 489999999 7999999999999985433
Q ss_pred ceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 460 EVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 460 ~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
..|+++|+.. +.||||++|||++|+|||++++|||||+++
T Consensus 285 ~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 285 SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 3599988753 259999999999999999999999999975
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8.8e-57 Score=460.31 Aligned_cols=315 Identities=26% Similarity=0.439 Sum_probs=268.8
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCC--CC------CCcccccCCCcCCCCCCCceecCceEE
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK--CY------FSISCYFHSRYKSRKSNTYTEIGKSCE 144 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~--C~------~~~~C~~~~~f~~~~SsT~~~~~~~~~ 144 (506)
..+++.+. +..|+++|+||||||+++|++||||+++||++.. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 35677774 7799999999999999999999999999998764 63 235898899999999999999999999
Q ss_pred EEeCCCc-EEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccC-CCCchHHHHHHcCCCCCce
Q 010616 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG-DAVPVWDNMVEQGLVSEEV 222 (506)
Q Consensus 145 ~~Y~~Gs-~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~-~~~~~~~~L~~qg~i~~~~ 222 (506)
+.|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||+|.+++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998754 3589999999886543 3467999999999999999
Q ss_pred EEEEecCCCCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHH
Q 010616 223 FSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPV 302 (506)
Q Consensus 223 FSl~L~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~ 302 (506)
||+||++.. ...|+|+|||+|+++|.|++.|+|+....+|.|.+++|.++++.+.. .+..++|||||+++++|.++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999988999999999999998753 35789999999999999999
Q ss_pred HHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchh
Q 010616 303 VTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSA 382 (506)
Q Consensus 303 ~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (506)
+++|.+++++...
T Consensus 231 ~~~i~~~~~~~~~------------------------------------------------------------------- 243 (342)
T 3pvk_A 231 ADQIIKAFNGKLT------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHTTCEEE-------------------------------------------------------------------
T ss_pred HHHHHHHcCCeec-------------------------------------------------------------------
Confidence 9999999976510
Q ss_pred hhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEEC-CEEEEECcccceeeeccCc---
Q 010616 383 CEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIG-DKIFNLSPEQYILKTGEGI--- 458 (506)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~g-g~~~~l~~~~yi~~~~~~~--- 458 (506)
......+.|.+||+ ..|+|+|+|+ |.+++|++++|+++.....
T Consensus 244 ------------------------------~~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~ 290 (342)
T 3pvk_A 244 ------------------------------QDSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGDDGQP 290 (342)
T ss_dssp ------------------------------ECTTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC--------
T ss_pred ------------------------------ccCCCceEEEEecC---CCCceEEEECCCCEEEEcHHHheeeccccCCCc
Confidence 00111235889999 4599999996 8999999999998743211
Q ss_pred cceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 459 AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 459 ~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
...|++.|... +.||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 291 YDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp --CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 26799988752 479999999999999999999999999985
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.7e-57 Score=459.07 Aligned_cols=306 Identities=27% Similarity=0.447 Sum_probs=265.1
Q ss_pred CCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc-EEEEEEEE
Q 010616 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (506)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs-~~G~~~~D 159 (506)
.+..|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 3457788999999998 7778899999999999 79999999
Q ss_pred EEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccC---CCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010616 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG---DAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (506)
Q Consensus 160 tv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~---~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~ 236 (506)
+|++++..++++.||++...++..+.....+||||||++..+.. ...+++++|+++ +.+++||+||++. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 99999999999999999987653333357799999999887652 467899999987 8999999999874 28
Q ss_pred cEEEECCCCCCCcccceEEEecc-cccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCcc
Q 010616 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGV 315 (506)
Q Consensus 237 G~L~fGgiD~~~~~G~l~~~pl~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~ 315 (506)
|+|+|||+|+++|+|++.|+|+. ..++|.|.+++|++++ + +..+..+||||||+++++|.+++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~- 237 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ- 237 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCE-
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999996 6789999999999999 2 3456789999999999999999999999884330
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhh
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLK 395 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (506)
+
T Consensus 238 -------------------------------------~------------------------------------------ 238 (323)
T 1bxo_A 238 -------------------------------------Q------------------------------------------ 238 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred hhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCC
Q 010616 396 QKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPR 475 (506)
Q Consensus 396 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~ 475 (506)
....+.|.+||+ ..+|+|+|+|+|++++|++++|+++... +...|+++|+..+ .
T Consensus 239 -------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~----~ 292 (323)
T 1bxo_A 239 -------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS----G 292 (323)
T ss_dssp -------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT----T
T ss_pred -------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC----C
Confidence 012467889999 5799999999999999999999987532 2368999887642 3
Q ss_pred CCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 476 GPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 476 ~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
++.||||++|||++|+|||++++|||||++|
T Consensus 293 ~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 293 IGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp CSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 4689999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4.9e-56 Score=454.67 Aligned_cols=312 Identities=27% Similarity=0.478 Sum_probs=265.8
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcE
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~ 152 (506)
..+||.|+ +..|+++|+||||||++.|+|||||+++||+|. +.|+|++|++ ..++.|.++|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEE
Confidence 46899997 569999999999999999999999999999753 5788877764 467899999999999
Q ss_pred EEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeecccccccc--------CCCCchHHHHHHcCCCCCceEE
Q 010616 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV--------GDAVPVWDNMVEQGLVSEEVFS 224 (506)
Q Consensus 153 ~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--------~~~~~~~~~L~~qg~i~~~~FS 224 (506)
.|.+++|+|++++..++++.|||+....+ | ...+||||||++..+. ....+++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998654 2 3579999999988765 3457899999999999999999
Q ss_pred EEecCCC-CCCCCcEEEECCCCCCCcccceEEEeccc----ccceEEEEceEEECC-eeeeeecCCceEEEcCCCCCeee
Q 010616 225 FWLNRDP-DAEEGGEIVFGGVDPKHFKGKHTYVPVTK----KGYWQFELGDILIGN-QSTGVCEGGCAAIVDSGTSLLAG 298 (506)
Q Consensus 225 l~L~~~~-~~~~~G~L~fGgiD~~~~~G~l~~~pl~~----~~~w~v~l~~i~v~g-~~~~~~~~~~~~ivDtgt~~~~l 298 (506)
+||.+.. +....|+|+|||+|+++|.|++.|+|+.. .++|.+. ++|++++ +.+. .+..++|||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12347999999999999999999999977 7899999 9999998 7653 2458999999999999
Q ss_pred CHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcc
Q 010616 299 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 378 (506)
Q Consensus 299 p~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (506)
|.+++++|.+++++. +
T Consensus 221 P~~~~~~l~~~~~a~---------------------------------------~------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAV---------------------------------------A------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCE---------------------------------------E-------------------------
T ss_pred CHHHHHHHHHhhCCE---------------------------------------E-------------------------
Confidence 999999999888754 0
Q ss_pred cchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeecc--
Q 010616 379 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGE-- 456 (506)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~-- 456 (506)
....+.|.+||+....+|+|+|+|+|++++|+|++|+++...
T Consensus 237 ------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~~~~ 280 (340)
T 1wkr_A 237 ------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNT 280 (340)
T ss_dssp ------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGG
T ss_pred ------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhcccccccc
Confidence 112467889998767899999999999999999999986542
Q ss_pred ---CccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 457 ---GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 457 ---~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+....|.+.|...+.....++.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 281 AIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred ccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 12357998888765333345679999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-55 Score=468.45 Aligned_cols=327 Identities=27% Similarity=0.412 Sum_probs=263.9
Q ss_pred EeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEEE
Q 010616 75 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISG 154 (506)
Q Consensus 75 ~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G 154 (506)
.+|.+..+..|+++|+||||||+|+|+|||||+++||+|..| |..++.|+|++|+||+..++.|.++|++|++.|
T Consensus 66 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 140 (455)
T 3lpj_A 66 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 140 (455)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred ccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEE
Confidence 345556678999999999999999999999999999999877 667899999999999999999999999999999
Q ss_pred EEEEEEEEECc-EEec-ccEEEEEEEeCCccccccceeeeeeccccccccC--CCCchHHHHHHcCCCCCceEEEEecCC
Q 010616 155 FFSQDNVEVGD-VVVK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNRD 230 (506)
Q Consensus 155 ~~~~Dtv~~gg-~~~~-~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~L~~~ 230 (506)
.+++|+|+|++ ..+. .+.|+++.............+||||||++..+.. ...+++++|++|+.|. ++||+||.+.
T Consensus 141 ~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~ 219 (455)
T 3lpj_A 141 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 219 (455)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEeccc
Confidence 99999999984 2222 2567887765543223467899999999988764 3788999999999997 9999999763
Q ss_pred CC--------CCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeec---CCceEEEcCCCCCeeeC
Q 010616 231 PD--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAGP 299 (506)
Q Consensus 231 ~~--------~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~---~~~~~ivDtgt~~~~lp 299 (506)
.. ...+|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+.+.. ....++|||||+++++|
T Consensus 220 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 299 (455)
T 3lpj_A 220 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 299 (455)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEE
T ss_pred cccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCC
Confidence 10 23489999999999999999999999999999999999999999876432 25689999999999999
Q ss_pred HHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCccc
Q 010616 300 TPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAV 379 (506)
Q Consensus 300 ~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (506)
.+++++|.+++++.... ..+...
T Consensus 300 ~~~~~~i~~~i~~~~~~--------~~~~~~------------------------------------------------- 322 (455)
T 3lpj_A 300 KKVFEAAVKSIKAASST--------EKFPDG------------------------------------------------- 322 (455)
T ss_dssp HHHHHHHHHHHHHHTTT--------SCCCHH-------------------------------------------------
T ss_pred HHHHHHHHHHhhhhccc--------cccCcc-------------------------------------------------
Confidence 99999999998654100 000000
Q ss_pred chhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCCC-----CCcEEEEECCE------EEEECcc
Q 010616 380 CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPT-----MPNVSFTIGDK------IFNLSPE 448 (506)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~-----~P~l~f~~gg~------~~~l~~~ 448 (506)
....|.++|+.... +|+|+|+|+|. +++|+|+
T Consensus 323 -------------------------------------~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~ 365 (455)
T 3lpj_A 323 -------------------------------------FWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQ 365 (455)
T ss_dssp -------------------------------------HHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHH
T ss_pred -------------------------------------cccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHH
Confidence 00123567876554 89999999765 5999999
Q ss_pred cceeeeccCc--cceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 449 QYILKTGEGI--AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 449 ~yi~~~~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+|+++..+.. ...|+. |... +..+.||||++|||++|+|||++++|||||+++
T Consensus 366 ~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 366 QYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp HHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred HheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 9999866432 247996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2e-54 Score=449.75 Aligned_cols=324 Identities=26% Similarity=0.456 Sum_probs=259.4
Q ss_pred eceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEEEE
Q 010616 76 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGF 155 (506)
Q Consensus 76 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G~ 155 (506)
+|++..+..|+++|+||||||++.|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.++|++|++.|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 567777889999999999999999999999999999999885 34 6889999999999999999999999999999
Q ss_pred EEEEEEEECcEE-ec-ccEEEEEEEeCCccccccceeeeeecccccccc--CCCCchHHHHHHcCCCCCceEEEEecCC-
Q 010616 156 FSQDNVEVGDVV-VK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEEVFSFWLNRD- 230 (506)
Q Consensus 156 ~~~Dtv~~gg~~-~~-~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~~FSl~L~~~- 230 (506)
+++|+|++++.. .. .+.|++.....+........+||||||++..+. ....+++++|++|+.+ +++||+||.+.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998632 22 356777655443221235679999999998875 4577899999999999 79999999752
Q ss_pred ----CCCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecC---CceEEEcCCCCCeeeCHHHH
Q 010616 231 ----PDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEG---GCAAIVDSGTSLLAGPTPVV 303 (506)
Q Consensus 231 ----~~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~---~~~~ivDtgt~~~~lp~~~~ 303 (506)
.....+|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+++++.+.+... ...+||||||+++++|.+++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12234899999999999999999999999999999999999999998764322 46899999999999999999
Q ss_pred HHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhh
Q 010616 304 TEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSAC 383 (506)
Q Consensus 304 ~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (506)
++|.+++++.....
T Consensus 240 ~~l~~~i~~~~~~~------------------------------------------------------------------ 253 (383)
T 2ewy_A 240 DAVVEAVARASLIP------------------------------------------------------------------ 253 (383)
T ss_dssp HHHHHHHHHTTCSS------------------------------------------------------------------
T ss_pred HHHHHHHhhhcccc------------------------------------------------------------------
Confidence 99999986541000
Q ss_pred hhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCC-CCceEecCCCCC-----CCCcEEEEECC------EEEEECcccce
Q 010616 384 EMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP-MGESIIDCDRIP-----TMPNVSFTIGD------KIFNLSPEQYI 451 (506)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~l~f~~gg------~~~~l~~~~yi 451 (506)
..+.. ...+.++|.... .+|.|+|+|+| .+++|+|++|+
T Consensus 254 -----------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi 304 (383)
T 2ewy_A 254 -----------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYI 304 (383)
T ss_dssp -----------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHE
T ss_pred -----------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHhe
Confidence 00000 012356776542 58999999965 37999999999
Q ss_pred eeecc-CccceeEe-eeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 452 LKTGE-GIAEVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 452 ~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
++..+ +....|+. ++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 305 ~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 305 QPMMGAGLNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp EEECCCTTCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred eecccCCCCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 87642 22357985 4442 12479999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.1e-54 Score=452.44 Aligned_cols=323 Identities=27% Similarity=0.433 Sum_probs=259.3
Q ss_pred ceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEEEEE
Q 010616 77 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFF 156 (506)
Q Consensus 77 l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G~~ 156 (506)
|.+..+..|+++|+||||||+|+|+|||||+++||+|..| |..++.|+|++|+||+..++.|.++|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444567999999999999999999999999999999887 56689999999999999999999999999999999
Q ss_pred EEEEEEEC-cEEecc-cEEEEEEEeCCccccccceeeeeeccccccccCC--CCchHHHHHHcCCCCCceEEEEecCCC-
Q 010616 157 SQDNVEVG-DVVVKD-QVFIEATREGSLTFLLARFDGIIGLGFREIAVGD--AVPVWDNMVEQGLVSEEVFSFWLNRDP- 231 (506)
Q Consensus 157 ~~Dtv~~g-g~~~~~-~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~--~~~~~~~L~~qg~i~~~~FSl~L~~~~- 231 (506)
++|+|+|+ +..+.. +.|+++.............+||||||++..+... ..+++++|++|+.|+ ++||+||.+..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 444443 3467766554432234578999999999887643 788999999999997 99999997531
Q ss_pred ----C---CCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeec---CCceEEEcCCCCCeeeCHH
Q 010616 232 ----D---AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 232 ----~---~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~---~~~~~ivDtgt~~~~lp~~ 301 (506)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|+++++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23489999999999999999999999999999999999999999876422 2567999999999999999
Q ss_pred HHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccch
Q 010616 302 VVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCS 381 (506)
Q Consensus 302 ~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (506)
++++|.+++++....
T Consensus 256 ~~~~i~~~i~~~~~~----------------------------------------------------------------- 270 (402)
T 3vf3_A 256 VFEAAVKSIKAASST----------------------------------------------------------------- 270 (402)
T ss_dssp HHHHHHHHHHHHTTT-----------------------------------------------------------------
T ss_pred HHHHHHHHHhhhccc-----------------------------------------------------------------
Confidence 999999998654100
Q ss_pred hhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCC-CCCceEecCCCCC-----CCCcEEEEECCE------EEEECccc
Q 010616 382 ACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN-PMGESIIDCDRIP-----TMPNVSFTIGDK------IFNLSPEQ 449 (506)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~-~~~~~~~~C~~~~-----~~P~l~f~~gg~------~~~l~~~~ 449 (506)
...+. ....+.++|+... .+|+|+|+|+|. +++|+|++
T Consensus 271 ------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~ 320 (402)
T 3vf3_A 271 ------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ 320 (402)
T ss_dssp ------------------------------SCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHH
T ss_pred ------------------------------cccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEECHHH
Confidence 00000 0112356887655 689999999764 59999999
Q ss_pred ceeeeccCcc--ceeEe-eeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 450 YILKTGEGIA--EVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 450 yi~~~~~~~~--~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
|+++..+... ..|+. .+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 321 yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 321 YLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp HEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred heehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 9997654322 47995 3321 23579999999999999999999999999975
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=9.6e-54 Score=446.38 Aligned_cols=325 Identities=26% Similarity=0.401 Sum_probs=258.7
Q ss_pred eceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCcEEEE
Q 010616 76 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGF 155 (506)
Q Consensus 76 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs~~G~ 155 (506)
+|++..+..|+++|+||||||++.|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.++|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 455666789999999999999999999999999999999885 33 6899999999999999999999999999999
Q ss_pred EEEEEEEEC-cEEec-ccEEEEEEEeCCccccccceeeeeeccccccccC--CCCchHHHHHHcCCCCCceEEEEecCCC
Q 010616 156 FSQDNVEVG-DVVVK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (506)
Q Consensus 156 ~~~Dtv~~g-g~~~~-~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~L~~~~ 231 (506)
+++|+|+++ +..+. .+.|++..............+||||||++..+.. ...+++++|++|+.++ ++||+||.+..
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~~ 167 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 167 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEecccc
Confidence 999999998 55443 2567766654332112356799999999987753 5678999999999997 89999998631
Q ss_pred C--------CCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeec---CCceEEEcCCCCCeeeCH
Q 010616 232 D--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAGPT 300 (506)
Q Consensus 232 ~--------~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~---~~~~~ivDtgt~~~~lp~ 300 (506)
- ...+|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+.+.. ....+||||||+++++|.
T Consensus 168 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 247 (395)
T 2qp8_A 168 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 247 (395)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred ccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCH
Confidence 0 12489999999999999999999999999999999999999998875422 246799999999999999
Q ss_pred HHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccc
Q 010616 301 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 380 (506)
Q Consensus 301 ~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (506)
+++++|.+++++.... ..+..
T Consensus 248 ~~~~~l~~~i~~~~~~--------~~~~~--------------------------------------------------- 268 (395)
T 2qp8_A 248 KVFEAAVKSIKAASST--------EKFPD--------------------------------------------------- 268 (395)
T ss_dssp HHHHHHHHHHHHHTTT--------SCCCH---------------------------------------------------
T ss_pred HHHHHHHHHHhhhccc--------ccCCc---------------------------------------------------
Confidence 9999999988643100 00000
Q ss_pred hhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCCC-----CCCcEEEEECCE------EEEECccc
Q 010616 381 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIP-----TMPNVSFTIGDK------IFNLSPEQ 449 (506)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~-----~~P~l~f~~gg~------~~~l~~~~ 449 (506)
.....+.++|.... .+|.|+|+|+|. +++|+|++
T Consensus 269 -----------------------------------~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~ 313 (395)
T 2qp8_A 269 -----------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ 313 (395)
T ss_dssp -----------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHH
T ss_pred -----------------------------------cccccccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHH
Confidence 00011235666543 589999999653 79999999
Q ss_pred ceeeecc--CccceeE-eeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 450 YILKTGE--GIAEVCI-SGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 450 yi~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
|+++..+ .....|+ .++... ++.||||++|||++|+|||++++|||||+++
T Consensus 314 yi~~~~~~~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 314 YLRPVEDVATSQDDCYKFAISQS------STGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp HEEEECCTTCCSCEEEEECEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred hEeecccCCCCCceEEEEEecCC------CCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 9997653 2335897 455532 2479999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=7.5e-53 Score=440.74 Aligned_cols=325 Identities=17% Similarity=0.273 Sum_probs=255.8
Q ss_pred ceeEece-ecCCceEEEEEEecCCCceEEEEecCCCCceEEeCC-----------CCCCCcccccCCCc------CCCCC
Q 010616 72 EDILPLK-NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS-----------KCYFSISCYFHSRY------KSRKS 133 (506)
Q Consensus 72 ~~~~~l~-n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~-----------~C~~~~~C~~~~~f------~~~~S 133 (506)
...+||+ |+.+.+|+++|.||||||+|.|+|||||+++||+|. .|. +..|..++.| ++..|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3468999 788999999999999999999999999999999999 664 4568878888 55444
Q ss_pred CCceecCceEEEEeC-CCc-EEEEEEEEEEEECc-----------EEecccEEEEEEEeCCccccccceeeeeecccccc
Q 010616 134 NTYTEIGKSCEINYG-SGS-ISGFFSQDNVEVGD-----------VVVKDQVFIEATREGSLTFLLARFDGIIGLGFREI 200 (506)
Q Consensus 134 sT~~~~~~~~~~~Y~-~Gs-~~G~~~~Dtv~~gg-----------~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 200 (506)
++....+.|.+.|+ +|+ +.|.+++|+|++++ ..++++.|||+.......+.....+||||||++..
T Consensus 88 -~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 -GCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp -TBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred -CCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 34556789999997 554 79999999999987 88999999999875432233567899999999876
Q ss_pred ccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCCCCCCc--c-c-----ceEEEecccc--cceEEEEce
Q 010616 201 AVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHF--K-G-----KHTYVPVTKK--GYWQFELGD 270 (506)
Q Consensus 201 s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~~--~-G-----~l~~~pl~~~--~~w~v~l~~ 270 (506)
+ +..+|. ++.+.+++||+||.+.. ..+|+|+||| |+++| . | ++.|+|+..+ ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 556664 55577899999998852 3489999999 99888 5 6 9999999766 899999999
Q ss_pred EEECCeee-eeecC--------CceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCC
Q 010616 271 ILIGNQST-GVCEG--------GCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLP 341 (506)
Q Consensus 271 i~v~g~~~-~~~~~--------~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~ 341 (506)
|+|+++.+ .+... +..+||||||+++++|++++++|.+++.+.- ..+.. .
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~----------~~~~~---------~-- 295 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL----------PKQAQ---------V-- 295 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS----------CGGGE---------E--
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh----------ccccc---------c--
Confidence 99999877 43221 3459999999999999999999999884320 00000 0
Q ss_pred ccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCce
Q 010616 342 EKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGES 421 (506)
Q Consensus 342 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 421 (506)
.+.....+
T Consensus 296 ------------------------------------------------------------------------~~~~~~~~ 303 (403)
T 3aup_A 296 ------------------------------------------------------------------------KSVAPFGL 303 (403)
T ss_dssp ------------------------------------------------------------------------CCCTTCSC
T ss_pred ------------------------------------------------------------------------CCCCCCCc
Confidence 00112236
Q ss_pred EecCCCCCCCCcEEEEECC---EEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCC
Q 010616 422 IIDCDRIPTMPNVSFTIGD---KIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKL 498 (506)
Q Consensus 422 ~~~C~~~~~~P~l~f~~gg---~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~ 498 (506)
.++|+.+..+|.|+|+|+| .+++|++++|+++..+ ...|+ +|+..+. +.++.||||+.|||++|+|||++++
T Consensus 304 c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~~~~ 378 (403)
T 3aup_A 304 CFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDLARS 378 (403)
T ss_dssp EECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEETTTT
T ss_pred eEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEECCCC
Confidence 7899887789999999976 4999999999997543 36899 7876542 1245899999999999999999999
Q ss_pred eEEE-EecC
Q 010616 499 RIGF-AEAA 506 (506)
Q Consensus 499 rIGf-A~~~ 506 (506)
|||| |+++
T Consensus 379 rIGf~A~~~ 387 (403)
T 3aup_A 379 RVGFSTSSL 387 (403)
T ss_dssp EEEEESSCG
T ss_pred EEEEecccc
Confidence 9999 8753
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.9e-52 Score=435.17 Aligned_cols=330 Identities=17% Similarity=0.228 Sum_probs=253.9
Q ss_pred CceeEeceec-CCceEEEEEEecCCCceEEEEecCCCCceEEeCCC-----------CCCCcccccCCCcCCCC-----C
Q 010616 71 DEDILPLKNF-MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK-----------CYFSISCYFHSRYKSRK-----S 133 (506)
Q Consensus 71 ~~~~~~l~n~-~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~-----------C~~~~~C~~~~~f~~~~-----S 133 (506)
....+|++.. .+.+|+++|+||||||+|.|++||||+++||+|.. |. +..|..++.|++.. +
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~-s~~C~~~~~~~~~~c~s~~~ 85 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCR-TSQCSLSGSIACGDCFNGPR 85 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTT-SHHHHHTTCCEEECCSSCCB
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCC-cccccccccCCCcccccCCC
Confidence 3455777744 57899999999999999999999999999999965 43 45787788887642 3
Q ss_pred CCceecCceEEEEeC-CCc-EEEEEEEEEEEEC---------cEEecccEEEEEEEeCCccccccceeeeeecccccccc
Q 010616 134 NTYTEIGKSCEINYG-SGS-ISGFFSQDNVEVG---------DVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV 202 (506)
Q Consensus 134 sT~~~~~~~~~~~Y~-~Gs-~~G~~~~Dtv~~g---------g~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~ 202 (506)
+++....|.|.+.|+ +|+ +.|++++|+|+|+ +..++++.|||+....... .....+||||||++.++
T Consensus 86 ~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS- 163 (413)
T 3vla_A 86 PGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA- 163 (413)
T ss_dssp TTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS-
T ss_pred CCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc-
Confidence 456666799999995 655 7899999999997 3678899999998753211 23568999999998876
Q ss_pred CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCCCCC-----Ccccc-eEEEecccc--------------c
Q 010616 203 GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPK-----HFKGK-HTYVPVTKK--------------G 262 (506)
Q Consensus 203 ~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgiD~~-----~~~G~-l~~~pl~~~--------------~ 262 (506)
+..+|.+++.+ +++||+||.+.. ..+|+|+|||+|.. +|.|+ ++|+|+..+ .
T Consensus 164 -----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~ 235 (413)
T 3vla_A 164 -----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSV 235 (413)
T ss_dssp -----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCC
T ss_pred -----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCc
Confidence 77889999988 899999999852 34899999999875 37888 999999764 6
Q ss_pred ceEEEEceEEECCeeeeeec--------CCceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHH
Q 010616 263 YWQFELGDILIGNQSTGVCE--------GGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDL 334 (506)
Q Consensus 263 ~w~v~l~~i~v~g~~~~~~~--------~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~ 334 (506)
+|.|.|++|+||++.+.+.. +++.+||||||+++++|+++|++|.+++.+.- ..
T Consensus 236 ~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~----------~~-------- 297 (413)
T 3vla_A 236 EYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES----------AA-------- 297 (413)
T ss_dssp SCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH----------HH--------
T ss_pred eEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh----------cc--------
Confidence 99999999999999886432 35789999999999999999999999885430 00
Q ss_pred HhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCC
Q 010616 335 LVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSL 414 (506)
Q Consensus 335 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 414 (506)
.+++...--..+ ..|+..
T Consensus 298 --~~~~~~~~~~~~------------------------------------------------------------~~C~~~ 315 (413)
T 3vla_A 298 --RNITRVASVAPF------------------------------------------------------------GACFST 315 (413)
T ss_dssp --TTCCEECCCTTC------------------------------------------------------------SCEEEC
T ss_pred --cCCCcCCCCCCC------------------------------------------------------------cceecc
Confidence 000000000000 123222
Q ss_pred CCCCCceEecCCC----CCCCCcEEEEECC--EEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcc
Q 010616 415 PNPMGESIIDCDR----IPTMPNVSFTIGD--KIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGV 488 (506)
Q Consensus 415 ~~~~~~~~~~C~~----~~~~P~l~f~~gg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~ 488 (506)
+ |.. ...+|+|+|+|+| +.|+|++++|+++..+ ...|+ +|...+. +.++.||||+.|||+
T Consensus 316 ~---------~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~fl~~ 381 (413)
T 3vla_A 316 D---------NILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQLED 381 (413)
T ss_dssp T---------TCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHHHTT
T ss_pred C---------CccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhhhcC
Confidence 1 111 0268999999976 8999999999998654 36898 6665542 234689999999999
Q ss_pred eEEEEeCCCCeEEEEec
Q 010616 489 YHTVFDSGKLRIGFAEA 505 (506)
Q Consensus 489 ~y~vfD~~~~rIGfA~~ 505 (506)
+|+|||++++|||||++
T Consensus 382 ~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 382 NLVQFDLATSRVGFSGT 398 (413)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCEEEEEEe
Confidence 99999999999999986
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.4e-49 Score=413.05 Aligned_cols=324 Identities=18% Similarity=0.251 Sum_probs=238.5
Q ss_pred eEece-ecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCC-------CCcccccCCCcCCCCCCCce-------e
Q 010616 74 ILPLK-NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-------FSISCYFHSRYKSRKSNTYT-------E 138 (506)
Q Consensus 74 ~~~l~-n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~-------~~~~C~~~~~f~~~~SsT~~-------~ 138 (506)
.+|++ ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46777 6788999999999997 999999999999995442 1456777778887533 332 1
Q ss_pred cCc-eEEEEeCCCcE-EEEEEEEEEEECc----EEeccc----EEEEEEEeCCccccccceeeeeeccccccccCCCCch
Q 010616 139 IGK-SCEINYGSGSI-SGFFSQDNVEVGD----VVVKDQ----VFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV 208 (506)
Q Consensus 139 ~~~-~~~~~Y~~Gs~-~G~~~~Dtv~~gg----~~~~~~----~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 208 (506)
..| .|.++|++|+. .|.+++|+|++++ ..++++ .|||+.......+ ....+||||||++.++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 59999999985 8999999999984 466665 5699876522222 4678999999998765 6
Q ss_pred HHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCCCCC--CcccceEEEecccc---cceEEEEceEEECCeeeeeecC
Q 010616 209 WDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPK--HFKGKHTYVPVTKK---GYWQFELGDILIGNQSTGVCEG 283 (506)
Q Consensus 209 ~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgiD~~--~~~G~l~~~pl~~~---~~w~v~l~~i~v~g~~~~~~~~ 283 (506)
..+|.++++ .+++||+||.+. .+|+|+|||+|.. +|.|++.|+|+..+ .+|.|.+++|+|+++.+.++..
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 778999885 479999999875 3899999998765 58999999999753 5677999999999988764433
Q ss_pred ---CceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCcccee
Q 010616 284 ---GCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVS 360 (506)
Q Consensus 284 ---~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 360 (506)
+..+||||||+++++|++++++|.+++.+.- . . +..++.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~----------~-----------~-------------~~~~g~---- 267 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL----------A-----------A-------------QHANGA---- 267 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH----------H-----------H-------------C---------
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh----------c-----------c-------------cccccc----
Confidence 4579999999999999999999998885420 0 0 000000
Q ss_pred cceeeeeecccccCCCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCC---------CCC
Q 010616 361 TGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRI---------PTM 431 (506)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~---------~~~ 431 (506)
..+ +.+...+ ...+|... ..+
T Consensus 268 -~~~------------------------------------------------~~~~~~~-~~~~C~~~~~~~~~~~~~~~ 297 (381)
T 1t6e_X 268 -PVA------------------------------------------------RAVEAVA-PFGVCYDTKTLGNNLGGYAV 297 (381)
T ss_dssp ---C------------------------------------------------CEECCCT-TCSCEEEGGGCCEETTEECC
T ss_pred -ccc------------------------------------------------ccCCCCC-CCCccCCCCCCcccccCCcC
Confidence 000 0000000 11233322 268
Q ss_pred CcEEEEEC-CEEEEECcccceeeeccCccceeEeeeeeccCC---CCCCCceEeCHHhhcceEEEEeCCCCeEEEEecC
Q 010616 432 PNVSFTIG-DKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP---PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 432 P~l~f~~g-g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~---~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
|+|+|+|+ |++|+|++++|+++..+ ...|+ +|+..+.+ .+.++.||||+.|||++|+|||++++|||||+++
T Consensus 298 P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 298 PNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp CCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 99999996 59999999999997643 35898 57765421 1123689999999999999999999999999975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.3e-48 Score=377.40 Aligned_cols=238 Identities=63% Similarity=1.103 Sum_probs=218.1
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc
Q 010616 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (506)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs 151 (506)
+..++|.|+.+.+|+++|.||||||+|.|++||||+++||+|..|..+..|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 45689999999999999999999999999999999999999999965568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCC
Q 010616 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (506)
Q Consensus 152 ~~G~~~~Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~ 231 (506)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||+|.+++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876544556678999999998776 57889999999999999999999864
Q ss_pred CCCCCcEEEECCCCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhC
Q 010616 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 311 (506)
Q Consensus 232 ~~~~~G~L~fGgiD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~ 311 (506)
+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+++++.+.++..+..++|||||+++++|.+++++|.++++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33458999999999999999999999998999999999999999987766677899999999999999999999999997
Q ss_pred CC
Q 010616 312 GE 313 (506)
Q Consensus 312 ~~ 313 (506)
++
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.2e-44 Score=352.68 Aligned_cols=241 Identities=49% Similarity=0.949 Sum_probs=211.5
Q ss_pred CcEEecccEEEEEEEeCCccccccceeeeeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECC
Q 010616 164 GDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 243 (506)
Q Consensus 164 gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGg 243 (506)
|+++++++.|||++..++..|.....+||||||++..+.....+++++|++||+|.+++||+||++......+|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999887655666788999999999888777889999999999999999999999874333489999999
Q ss_pred CCCCCcccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHHHHHHhCCCccccccchhh
Q 010616 244 VDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLV 323 (506)
Q Consensus 244 iD~~~~~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~i~~~~~~~~~~~~~c~~~ 323 (506)
+|+++|+|+++|+|+.+.++|.|.+++|+++++.+. +..+..+++||||+++++|.+++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998752 5677899999999999999999999999997540
Q ss_pred hhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccccCCCcccchhhhhHHHHHHHHhhhhhhHHHH
Q 010616 324 VSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKV 403 (506)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (506)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCH
Q 010616 404 LSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGD 483 (506)
Q Consensus 404 ~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~ 483 (506)
...+.|.+||+.+.++|+|+|+|+|++++|++++|+++..+.+...|+++|+..+.+.+.++.||||+
T Consensus 151 ------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~ 218 (241)
T 1lya_B 151 ------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGD 218 (241)
T ss_dssp ------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECH
T ss_pred ------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEech
Confidence 11356889999878899999999999999999999998765445689999988765444567899999
Q ss_pred HhhcceEEEEeCCCCeEEEEecC
Q 010616 484 VFMGVYHTVFDSGKLRIGFAEAA 506 (506)
Q Consensus 484 ~fl~~~y~vfD~~~~rIGfA~~~ 506 (506)
+|||++|+|||++++|||||+++
T Consensus 219 ~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 219 VFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999986
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=2.3e-23 Score=173.19 Aligned_cols=93 Identities=60% Similarity=1.057 Sum_probs=86.9
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCC-CcccccCCCcCCCCCCCceecCceEEEEeCCCc
Q 010616 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (506)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs 151 (506)
..+||.|+.+..|+++|.||||||+|.|+|||||+++||+|..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999962 247998999999999999999999999999999
Q ss_pred EEEEEEEEEEEECc
Q 010616 152 ISGFFSQDNVEVGD 165 (506)
Q Consensus 152 ~~G~~~~Dtv~~gg 165 (506)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.84 E-value=3.7e-21 Score=156.86 Aligned_cols=87 Identities=66% Similarity=1.107 Sum_probs=77.3
Q ss_pred CceEecCCCCCCCCcEEEEECCEEEEECcccceeeeccCccceeEeeeeeccCCCCCCCceEeCHHhhcceEEEEeCCCC
Q 010616 419 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKL 498 (506)
Q Consensus 419 ~~~~~~C~~~~~~P~l~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~ 498 (506)
|.|.+||+.+.++|+|+|+|+|++++|+|++|+++...++...|+++|++.+.+ +.++.||||++|||++|+|||++++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 578999998888999999999999999999999987654456899999987654 4557899999999999999999999
Q ss_pred eEEEEecC
Q 010616 499 RIGFAEAA 506 (506)
Q Consensus 499 rIGfA~~~ 506 (506)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999986
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.75 E-value=2.2e-19 Score=151.85 Aligned_cols=105 Identities=61% Similarity=1.108 Sum_probs=78.0
Q ss_pred CCCccccccchhhhhhcchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccc--cCCCcccchhhhhHHH
Q 010616 311 GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENV--SAGDSAVCSACEMAVV 388 (506)
Q Consensus 311 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 388 (506)
+++|.++..|+.+|++|+..|+++|++.++|++||+++|+|+.++++-+..+++.++++++. ++.+...|++|+++++
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~ 81 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSVGEAPLCTACEMAVV 81 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC------------------------CCHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccCCCCCcChhHHHHHH
Confidence 45678899999999999999999999999999999999999999887777777777775322 2358899999999999
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhccCCC
Q 010616 389 WVQNQLKQKQTKEKVLSYINELCDSLP 415 (506)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~c~~~~ 415 (506)
|+|+.|++++|+++|++++++.|.++|
T Consensus 82 ~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 82 WMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999886
No 39
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.16 E-value=0.0002 Score=57.78 Aligned_cols=43 Identities=23% Similarity=0.574 Sum_probs=39.6
Q ss_pred CCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCC
Q 010616 375 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 417 (506)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 417 (506)
.+...|.+|++++.++++.|+++.|+++|..++++.|..+|..
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~ 45 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS 45 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC
Confidence 3567899999999999999999999999999999999999864
No 40
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.09 E-value=0.00032 Score=55.53 Aligned_cols=41 Identities=37% Similarity=0.715 Sum_probs=38.4
Q ss_pred cccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCC
Q 010616 377 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 417 (506)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 417 (506)
...|.+|++++.++++.++++.|+++|.+++++.|..+|..
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 45799999999999999999999999999999999999864
No 41
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.09 E-value=0.00021 Score=57.71 Aligned_cols=39 Identities=38% Similarity=0.734 Sum_probs=35.0
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccccC
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFN 354 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~ 354 (506)
+...|+.++++|++.|+++|.++.+|++||+++|+|+.+
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 678899999999999999999999999999999999764
No 42
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.02 E-value=0.00036 Score=54.63 Aligned_cols=46 Identities=28% Similarity=0.689 Sum_probs=40.4
Q ss_pred ccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCC
Q 010616 378 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCD 426 (506)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~ 426 (506)
..|.+|++++.++++.++++.|+++|..++++.|..+|.. +...|.
T Consensus 3 ~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 48 (80)
T 3bqp_A 3 GFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCD 48 (80)
T ss_dssp TTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHH
T ss_pred CcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhH
Confidence 5799999999999999999999999999999999999863 334554
No 43
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=96.85 E-value=0.00068 Score=53.56 Aligned_cols=41 Identities=24% Similarity=0.625 Sum_probs=38.1
Q ss_pred CcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCC
Q 010616 376 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 416 (506)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 416 (506)
+...|.+|++++.++++.++++.|+++|...+++.|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 56789999999999999999999999999999999999884
No 44
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=96.83 E-value=0.00043 Score=54.19 Aligned_cols=37 Identities=30% Similarity=0.679 Sum_probs=35.4
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccc
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 352 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 352 (506)
+...|+.++++|++.|+++|.+.++|++||+.+|+|+
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6788999999999999999999999999999999995
No 45
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=96.83 E-value=0.00027 Score=57.98 Aligned_cols=37 Identities=30% Similarity=0.505 Sum_probs=35.3
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccc
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 352 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 352 (506)
+...|+.++++|++.|+++|.+..+|+.||+.+++|+
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 5678999999999999999999999999999999995
No 46
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=96.81 E-value=0.00068 Score=52.45 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=35.8
Q ss_pred ccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCC
Q 010616 378 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 416 (506)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 416 (506)
..|.+|+++++.+++.| ++.|+++|+..+++.|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 36999999999999999 999999999999999999985
No 47
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.71 E-value=0.00076 Score=52.63 Aligned_cols=40 Identities=28% Similarity=0.519 Sum_probs=37.2
Q ss_pred cccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCC
Q 010616 377 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 417 (506)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 417 (506)
...|.+|+++++++++.++++ |++.|+.++++.|..+|..
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 467999999999999999999 9999999999999999754
No 48
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=96.57 E-value=0.0004 Score=54.93 Aligned_cols=38 Identities=39% Similarity=0.749 Sum_probs=35.3
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCcccccccccccc
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAF 353 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~ 353 (506)
+...|+.++++|++.|+++|.+.++|++||+.+|+|+.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 57789999999999999999999999999999999963
No 49
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=96.53 E-value=0.00094 Score=52.23 Aligned_cols=38 Identities=16% Similarity=0.460 Sum_probs=36.6
Q ss_pred cchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCC
Q 010616 379 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 416 (506)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 416 (506)
.|.+|+++++++++.++++.|+++|+..+++.|..+|.
T Consensus 3 ~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 3 FCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp HHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred cchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 59999999999999999999999999999999999985
No 50
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=96.50 E-value=0.00049 Score=53.87 Aligned_cols=37 Identities=22% Similarity=0.492 Sum_probs=35.4
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCccccccccccc
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 352 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 352 (506)
+...|+.+|++|++.|+++|.++.+|+.||..+++|+
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 6788999999999999999999999999999999995
No 51
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.40 E-value=0.0006 Score=53.24 Aligned_cols=38 Identities=21% Similarity=0.431 Sum_probs=35.7
Q ss_pred ccccccchhhhhhcchhhHHHHhhCCCCcccccccccc
Q 010616 314 GVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 351 (506)
Q Consensus 314 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c 351 (506)
+.+...|+.+|++|++.|+++|.+..+|+.||+.+++|
T Consensus 40 ~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 45678899999999999999999999999999999998
No 52
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=96.33 E-value=0.0022 Score=50.44 Aligned_cols=40 Identities=25% Similarity=0.468 Sum_probs=37.7
Q ss_pred cccchhhhhHHHHHHHHhhhhhhH-HHHHHhhhhhccCCCC
Q 010616 377 SAVCSACEMAVVWVQNQLKQKQTK-EKVLSYINELCDSLPN 416 (506)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~ 416 (506)
...|..|+++++.+++.++++.|+ ++|..++++.|..+|.
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~ 43 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 43 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc
Confidence 357999999999999999999999 9999999999999985
No 53
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=95.89 E-value=0.0012 Score=52.07 Aligned_cols=37 Identities=35% Similarity=0.710 Sum_probs=34.5
Q ss_pred ccccchhhhhhcchhhHHHHhhC-CCCccccccccccc
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSG-LLPEKVCQQIGLCA 352 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~c~ 352 (506)
+...|+.++++|++.|++.|.+. .+|++||+.+|+|+
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 47789999999999999999999 49999999999995
No 54
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=95.86 E-value=0.0015 Score=51.40 Aligned_cols=37 Identities=24% Similarity=0.718 Sum_probs=33.0
Q ss_pred cccccchhhhhhcchhhHHHHhhCCCCccccccccccc
Q 010616 315 VVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 352 (506)
Q Consensus 315 ~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 352 (506)
.++..|+.++++|++.|+++|. ..+|++||+++|+|+
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 44 GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 4678899999999998887776 699999999999995
No 55
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=95.59 E-value=0.0026 Score=49.10 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=31.7
Q ss_pred ccccchhhhhhcchhhHHHHhhCCCCcccccccc
Q 010616 316 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIG 349 (506)
Q Consensus 316 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 349 (506)
+...|+.+|++|++.|+++|.++.+|++||.+++
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 6778999999999999999999999999999874
No 56
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=95.49 E-value=0.0041 Score=50.84 Aligned_cols=52 Identities=15% Similarity=0.334 Sum_probs=43.2
Q ss_pred CCcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCCCCCCceEecCCCC
Q 010616 375 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRI 428 (506)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~ 428 (506)
.+...|.+|++++.+|++.+ +.|+++|+..+++.|..+|.....+.-.|..+
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~ 70 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHY 70 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 57889999999999999999 77899999999999999885433344567654
No 57
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.04 E-value=0.081 Score=46.12 Aligned_cols=91 Identities=18% Similarity=0.226 Sum_probs=53.0
Q ss_pred CCceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc--EEEEEEE
Q 010616 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS--ISGFFSQ 158 (506)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs--~~G~~~~ 158 (506)
....+++++.|+. +++++++|||++.+.+...... .+.-....+ ..+. ....+.|. ..|....
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~----~~~~------~~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLAK---KTGLSRMID----KRFI------GEARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HHTGGGGCB----CCCC-----------------CEEEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccCHHHHH---HcCCCccCC----cceE------EEEecCCCcccccEEEE
Confidence 4567899999986 8999999999999988532211 111111111 1111 01122222 3466777
Q ss_pred EEEEECcEEecccEEEEEEEeCCccccccceeeeeecc
Q 010616 159 DNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLG 196 (506)
Q Consensus 159 Dtv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg 196 (506)
+.+.+|+..+. ..|.+.. ...+||||+-
T Consensus 88 ~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 88 AQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred EEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 89999998764 5554432 1358999996
No 58
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=93.05 E-value=0.035 Score=43.96 Aligned_cols=41 Identities=29% Similarity=0.460 Sum_probs=36.9
Q ss_pred CCCccccccchhhhhhcchhhHHHHhhCCCCcccccccccc
Q 010616 311 GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 351 (506)
Q Consensus 311 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c 351 (506)
++.......|+.+++.|.+.|+++|.++-+|+.||+.+..|
T Consensus 47 ~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 47 GWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred ccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 55555678899999999999999999999999999999876
No 59
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=88.31 E-value=0.67 Score=40.48 Aligned_cols=91 Identities=12% Similarity=0.218 Sum_probs=53.5
Q ss_pred CceEEEEEEecCCCceEEEEecCCCCceEEeCCCCCCCcccccCCCcCCCCCCCceecCceEEEEeCCCc--EEEEEEEE
Q 010616 82 DAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS--ISGFFSQD 159 (506)
Q Consensus 82 ~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Y~~Gs--~~G~~~~D 159 (506)
-..|++++.|.. +++++++|||++.+.+...... .|.-...-+. .+. ....+.|. ..|.....
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~------~~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWA------GVAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGC------EECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----cee------EEEEcCCccEEEEEEEEE
Confidence 356899999985 9999999999999998643211 2211100000 010 01122222 46878888
Q ss_pred EEEECcEEecccEEEEEEEeCCccccccceeeeeecc
Q 010616 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLG 196 (506)
Q Consensus 160 tv~~gg~~~~~~~Fg~~~~~~~~~~~~~~~dGIlGLg 196 (506)
.+.+|+..+. ..|.+.. ....+++||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 9999998653 4444332 12357999995
No 60
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=88.07 E-value=1.4 Score=38.01 Aligned_cols=26 Identities=12% Similarity=-0.004 Sum_probs=23.6
Q ss_pred ceEeCHHhhcceEEEEeCCCCeEEEE
Q 010616 478 LWILGDVFMGVYHTVFDSGKLRIGFA 503 (506)
Q Consensus 478 ~~ilG~~fl~~~y~vfD~~~~rIGfA 503 (506)
..|||..||+++-..+|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 46999999999999999999999774
No 61
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=75.53 E-value=3.5 Score=33.30 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=25.4
Q ss_pred EEEEEEecCCCceEEEEecCCCCceEEeCCCC
Q 010616 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (506)
Q Consensus 85 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (506)
=++.+.||. |.+.+++|||.+++-+....+
T Consensus 9 P~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIGG--QLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEecccC
Confidence 356789996 999999999999999976554
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=72.43 E-value=3.5 Score=33.56 Aligned_cols=28 Identities=18% Similarity=0.249 Sum_probs=23.9
Q ss_pred eEEEEEEecCCCceEEEEecCCCCceEEeC
Q 010616 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPS 113 (506)
Q Consensus 84 ~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~ 113 (506)
.-++.+.||. |.+.+++|||.+++-+..
T Consensus 8 RP~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 3467799996 999999999999999973
No 63
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=68.47 E-value=6 Score=31.88 Aligned_cols=29 Identities=24% Similarity=0.249 Sum_probs=24.8
Q ss_pred EEEEEecCCCceEEEEecCCCCceEEeCCCC
Q 010616 86 FGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (506)
Q Consensus 86 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (506)
++.+.||. |.+.+++|||.+++-+....+
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 66799996 999999999999999975544
No 64
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=67.85 E-value=4.2 Score=33.56 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=26.4
Q ss_pred EEEEEec---CCCceEEEEecCCCCceEEeCCCCC
Q 010616 86 FGEIGIG---SPPQNFSVIFDTGSSNLWVPSSKCY 117 (506)
Q Consensus 86 ~~~i~IG---tPpQ~~~v~lDTGSs~~WV~~~~C~ 117 (506)
.+.|.|| +|+|.+..++|||.+++-+....++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556666 7889999999999999999876664
No 65
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=61.58 E-value=6 Score=26.50 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=21.1
Q ss_pred CCeEEEeeeeecCchhhhHHhhhhhHh
Q 010616 26 NGLRRIGLKKRRLDLHSLNAARITRKE 52 (506)
Q Consensus 26 ~~~~~ipl~~~~~~~~~~~~~~~~~~~ 52 (506)
++++||||++.++.++.+.+.+.....
T Consensus 6 ~~l~RIPL~k~kS~R~~l~e~g~~~~~ 32 (43)
T 3vcm_P 6 TTFKRIFLKRMPSIRESLKERGVDMAR 32 (43)
T ss_dssp CCCEEEEEEECCCHHHHHHHHTCCGGG
T ss_pred cceeEEeeeecccHHHHHHHcCchHHH
Confidence 357899999999999988887654433
No 66
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=58.18 E-value=7.9 Score=25.27 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=21.1
Q ss_pred eEEEeeeeecCchhhhHHhhhhhHhh
Q 010616 28 LRRIGLKKRRLDLHSLNAARITRKER 53 (506)
Q Consensus 28 ~~~ipl~~~~~~~~~~~~~~~~~~~~ 53 (506)
++||||++.++.+..+.+.+....++
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~~~l 27 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLGEFL 27 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHHHHH
Confidence 68999999999988887777666654
No 67
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=57.83 E-value=8.4 Score=33.32 Aligned_cols=26 Identities=15% Similarity=0.029 Sum_probs=23.4
Q ss_pred ceEeCHHhhcceEEEEeCCCCeEEEE
Q 010616 478 LWILGDVFMGVYHTVFDSGKLRIGFA 503 (506)
Q Consensus 478 ~~ilG~~fl~~~y~vfD~~~~rIGfA 503 (506)
..|||..||+++-.+.|+.++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 47999999999999999999998764
No 68
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=57.81 E-value=6.9 Score=24.21 Aligned_cols=27 Identities=19% Similarity=0.138 Sum_probs=20.0
Q ss_pred CeEEEeeeeecCchhhhHHhhhhhHhh
Q 010616 27 GLRRIGLKKRRLDLHSLNAARITRKER 53 (506)
Q Consensus 27 ~~~~ipl~~~~~~~~~~~~~~~~~~~~ 53 (506)
+++||||++.++.+..+.+.+....++
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~~~~l 28 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQLSEFW 28 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccHHHHH
Confidence 468999999988887776665554443
No 69
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=56.81 E-value=9.6 Score=31.61 Aligned_cols=27 Identities=15% Similarity=0.116 Sum_probs=22.9
Q ss_pred EEEEEEecCCCceEEEEecCCCCceEEeCC
Q 010616 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPSS 114 (506)
Q Consensus 85 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~ 114 (506)
=++ +.||. |.+..++|||.+++-+...
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 345 89996 9999999999999999754
No 70
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=50.07 E-value=16 Score=30.15 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=24.8
Q ss_pred EEEEEecCCCceEEEEecCCCCceEEeCCCC
Q 010616 86 FGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (506)
Q Consensus 86 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (506)
.+.+.||. |.+..++|||.+++-+....+
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccC
Confidence 56788886 999999999999999976554
No 71
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=47.01 E-value=22 Score=30.13 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=25.5
Q ss_pred ceEEEEEEecCCCceEEEEecCCCCceEEeCCC
Q 010616 83 AQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (506)
Q Consensus 83 ~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~ 115 (506)
..-++.+.|+. |.+.+++|||.+++-+....
T Consensus 21 ~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 34567789986 99999999999999997543
No 72
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=46.03 E-value=5.6 Score=31.24 Aligned_cols=38 Identities=21% Similarity=0.370 Sum_probs=31.8
Q ss_pred CcccchhhhhHHHHHHHHhhhhhhHHHHHHhhhhhccCCC
Q 010616 376 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLP 415 (506)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 415 (506)
....|..|+++|+-++..+.+..+ +|+..+++.|.+..
T Consensus 9 ~~l~C~~C~~~Vk~~e~~i~~~~~--eie~~~d~~Ckk~~ 46 (87)
T 3s64_A 9 NVIVCEICKMAVKLIVPEADKDLD--QLEKEFIQGCMTLI 46 (87)
T ss_dssp CTTHHHHHHHHHHHHTTCSSCSST--THHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHhc
Confidence 457899999999999999986444 59999999997663
No 73
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=40.80 E-value=34 Score=33.14 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=31.3
Q ss_pred ccceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 250 KGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 250 ~G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
.|.+...|+.....|.++ |.||.+.+ .+++|||++.+++|..
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGTTL-------NLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred CCceeeeecCCCCEEEEE---EEECCEEE-------EEEEeCCCcceEEecC
Confidence 366677777777777765 67784444 4899999999999964
No 74
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=38.47 E-value=28 Score=29.10 Aligned_cols=22 Identities=9% Similarity=0.203 Sum_probs=18.8
Q ss_pred ceEEEEecCCCCceEEeCCCCC
Q 010616 96 QNFSVIFDTGSSNLWVPSSKCY 117 (506)
Q Consensus 96 Q~~~v~lDTGSs~~WV~~~~C~ 117 (506)
|.+..++|||.+++.+.....+
T Consensus 30 q~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 30 VYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp EEEEEEECTTCSSCEEETTTSC
T ss_pred EEEEEEecCCCCcEEEecccCC
Confidence 7789999999999999876553
No 75
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=38.09 E-value=36 Score=32.99 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=30.4
Q ss_pred cceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 251 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 251 G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
|.+...|+.....|.++ |.||.+.+ .+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKSTL-------HLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEEE-------EEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEEE-------EEEEeCCCccceEeeC
Confidence 55667777767777765 57774443 4899999999999864
No 76
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=37.66 E-value=40 Score=32.59 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=30.3
Q ss_pred cceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 251 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 251 G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
|.+...|+.....|.++ |.||.+.+ .+++|||++.+++|..
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q~~-------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDDTL-------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred CceeeeEcCCCCEEEEE---EEECCEEE-------EEEEcCCCcceEEecC
Confidence 56666777666677655 67784443 4899999999999964
No 77
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=35.79 E-value=30 Score=31.57 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=25.0
Q ss_pred eEEEEEEecCCCceEEEEecCCCCceEEeCCC
Q 010616 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (506)
Q Consensus 84 ~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~ 115 (506)
.-.+.+.||. |.+.+++|||.+++-+....
T Consensus 8 RP~vtv~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 8 RPLVTIRIGG--QLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEeccc
Confidence 3467899996 99999999999999996543
No 78
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.59 E-value=71 Score=30.86 Aligned_cols=43 Identities=19% Similarity=0.077 Sum_probs=28.9
Q ss_pred cceEEE-ecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 251 GKHTYV-PVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 251 G~l~~~-pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
|.+... |...+..|.++ |.||.- .....+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLDDAYITP---VQIGTP-----AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCCCEEEEE---EEECCC-----CeEEEEEECCCCCCeEEecC
Confidence 445556 66566667654 677732 12345899999999999863
No 79
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=26.92 E-value=49 Score=25.98 Aligned_cols=32 Identities=28% Similarity=0.313 Sum_probs=21.8
Q ss_pred ccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCH
Q 010616 261 KGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 300 (506)
Q Consensus 261 ~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~ 300 (506)
+..|.++ |.||.- .....++||||++.+.+|.
T Consensus 12 ~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~ 43 (97)
T 1lya_A 12 DAQYYGE---IGIGTP-----PQCFTVVFDTGSSNLWVPS 43 (97)
T ss_dssp TTEEEEE---EEETTT-----TEEEEEEEETTCCCEEEEB
T ss_pred CCeEEEE---EEECCC-----CeEEEEEEeCCCCceEEeE
Confidence 3455554 677732 1234589999999999995
No 80
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=26.33 E-value=77 Score=30.59 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=28.7
Q ss_pred cceEEE-ecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 251 GKHTYV-PVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 251 G~l~~~-pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
|.+... |...+..|.++ |.||.- .....+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYITS---VSIGTP-----AQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred cceeeecCCCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCeEEecC
Confidence 455556 55556667654 677732 12335899999999999864
No 81
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.87 E-value=70 Score=31.31 Aligned_cols=44 Identities=16% Similarity=0.146 Sum_probs=29.5
Q ss_pred ccceEEEeccc--ccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 250 KGKHTYVPVTK--KGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 250 ~G~l~~~pl~~--~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
+|.+...|+.. +..|.++ |.||.- .....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 46666777754 4566654 677732 12335899999999999854
No 82
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=24.16 E-value=41 Score=27.13 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=24.1
Q ss_pred EceEEECCeeeeeecCCceEEEcCCCCCeeeCHHHHHH
Q 010616 268 LGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTE 305 (506)
Q Consensus 268 l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~~~~~ 305 (506)
+-.+.++|+... +++|||+..+.+.......
T Consensus 10 ~v~v~I~Gq~~e-------~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 10 TTIVLINDTPLN-------VLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp EEEEEETTEEEE-------EEECTTCSSCEEEHHHHHH
T ss_pred EEEEEECCEEEE-------EEeccCCCcEEEccccCcc
Confidence 345788888654 8999999999999766543
No 83
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=24.07 E-value=57 Score=26.68 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=29.5
Q ss_pred CcccchhhhhHHHHHHH---------HhhhhhhHHHHHHhhhhh
Q 010616 376 DSAVCSACEMAVVWVQN---------QLKQKQTKEKVLSYINEL 410 (506)
Q Consensus 376 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 410 (506)
..+.|+.|..|..|+++ +.+++.+.+++.+++.+.
T Consensus 10 ~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 10 HNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp CCTTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 56789999999999975 567788999999888765
No 84
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=23.63 E-value=90 Score=30.04 Aligned_cols=43 Identities=16% Similarity=0.070 Sum_probs=27.6
Q ss_pred cceEEEecccccceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCHH
Q 010616 251 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (506)
Q Consensus 251 G~l~~~pl~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~~ 301 (506)
|.+...+...+..|.++ |.||.- .....+++|||++.+++|..
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iGTP-----~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 4 GTVPMTDYGNDIEYYGQ---VTIGTP-----GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp TEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CceeeeecCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCEEEccC
Confidence 34444454555667654 577732 12335899999999999853
No 85
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=22.78 E-value=45 Score=27.48 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=24.4
Q ss_pred ceEEEEceEEECCeeeeeecCCceEEEcCCCCCeeeCH
Q 010616 263 YWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 300 (506)
Q Consensus 263 ~w~v~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~ 300 (506)
.|+=.+- +.++|+.+. +++|||+..+.++.
T Consensus 11 l~~rP~v-ikI~Gq~~e-------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------EEecCCCCcEEEcc
Confidence 4555566 899998764 89999999999985
No 86
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=21.93 E-value=49 Score=26.45 Aligned_cols=27 Identities=30% Similarity=0.282 Sum_probs=21.7
Q ss_pred EEceEEECCeeeeeecCCceEEEcCCCCCeeeCH
Q 010616 267 ELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 300 (506)
Q Consensus 267 ~l~~i~v~g~~~~~~~~~~~~ivDtgt~~~~lp~ 300 (506)
.+-.+.++|+.+. +++|||+..+.+..
T Consensus 9 P~vtvkI~Gq~~e-------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 9 PLVTIKIGGQLKE-------ALLDTGADDTIIEE 35 (99)
T ss_dssp CEEEEEETTEEEE-------EEECTTCSSEEESC
T ss_pred CEEEEEECCEEEE-------EEeccCCCcEEEec
Confidence 3445788888764 89999999999985
No 87
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=20.92 E-value=1.2e+02 Score=27.80 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=26.4
Q ss_pred eEeceecCCceEEEE---EEecCC-----CceEEEEecCCCCceEEeCC
Q 010616 74 ILPLKNFMDAQYFGE---IGIGSP-----PQNFSVIFDTGSSNLWVPSS 114 (506)
Q Consensus 74 ~~~l~n~~~~~Y~~~---i~IGtP-----pQ~~~v~lDTGSs~~WV~~~ 114 (506)
.+|+.+ ...|.++ |.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 355544 2456554 678752 34578999999999999853
No 88
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=20.61 E-value=56 Score=26.84 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=29.5
Q ss_pred CCcccchhhhhHHHHHHH---------HhhhhhhHHHHHHhhhhh
Q 010616 375 GDSAVCSACEMAVVWVQN---------QLKQKQTKEKVLSYINEL 410 (506)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 410 (506)
-..+.|+.|..|..|+++ +.+++.+.+++.+++.+.
T Consensus 10 Y~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 54 (121)
T 3rdw_A 10 YHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQL 54 (121)
T ss_dssp ECCTTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT
T ss_pred EECCCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc
Confidence 356789999999999975 566778899998888765
Done!