Query 010617
Match_columns 506
No_of_seqs 136 out of 1448
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 10:38:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 8.8E-67 3E-71 540.5 35.7 431 3-493 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.1E-62 7.3E-67 516.3 38.7 452 1-493 6-478 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 2E-59 6.8E-64 492.5 45.4 434 3-494 6-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-60 7.6E-65 496.6 34.7 434 3-493 7-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1E-57 3.5E-62 477.6 39.7 430 3-493 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 8.1E-44 2.8E-48 369.1 37.1 396 1-493 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.4E-42 8.2E-47 354.7 29.5 354 2-492 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 9.5E-42 3.2E-46 352.7 28.9 383 4-495 1-401 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 8.5E-41 2.9E-45 345.6 25.1 383 4-496 1-403 (416)
10 3ia7_A CALG4; glycosysltransfe 100.0 2E-38 6.7E-43 325.5 35.3 377 1-493 2-397 (402)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.9E-38 6.4E-43 327.6 35.2 379 3-493 20-412 (415)
12 3h4t_A Glycosyltransferase GTF 100.0 3E-39 1E-43 332.7 25.1 367 4-495 1-383 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 3.6E-37 1.2E-41 319.5 34.9 365 2-473 6-383 (430)
14 2p6p_A Glycosyl transferase; X 100.0 7.9E-37 2.7E-41 312.2 34.2 354 4-495 1-380 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 1.9E-37 6.6E-42 322.9 29.1 375 3-494 20-435 (441)
16 4fzr_A SSFS6; structural genom 100.0 2.6E-35 8.8E-40 302.5 23.8 341 3-473 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 5E-34 1.7E-38 293.0 29.0 350 3-492 20-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.5E-33 8.5E-38 286.9 31.3 356 3-492 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 8.6E-31 2.9E-35 269.7 33.9 358 3-492 20-406 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.4E-26 4.6E-31 234.8 25.5 339 1-494 1-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.6E-26 5.6E-31 208.3 17.0 165 293-473 5-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 3E-19 1E-23 180.1 25.2 339 1-495 2-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.3E-14 4.5E-19 140.2 19.2 115 309-436 157-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 2.4E-14 8.1E-19 133.1 8.6 131 307-454 26-196 (224)
25 3okp_A GDP-mannose-dependent a 99.4 7.8E-11 2.7E-15 119.2 27.9 352 1-499 2-383 (394)
26 3c48_A Predicted glycosyltrans 99.4 4.5E-10 1.5E-14 115.6 31.0 85 366-462 305-396 (438)
27 1v4v_A UDP-N-acetylglucosamine 99.3 5.3E-11 1.8E-15 120.1 19.2 136 309-466 198-343 (376)
28 1vgv_A UDP-N-acetylglucosamine 99.3 2.4E-11 8.3E-16 122.9 14.9 166 308-499 204-379 (384)
29 3fro_A GLGA glycogen synthase; 99.2 5.3E-09 1.8E-13 107.1 29.5 164 311-497 252-432 (439)
30 3ot5_A UDP-N-acetylglucosamine 99.2 1.4E-10 5E-15 118.4 17.3 162 307-494 222-393 (403)
31 3dzc_A UDP-N-acetylglucosamine 99.2 1.5E-10 5E-15 118.1 15.8 138 308-466 229-376 (396)
32 2gek_A Phosphatidylinositol ma 99.2 4.5E-09 1.5E-13 106.7 25.6 87 366-464 262-356 (406)
33 2iuy_A Avigt4, glycosyltransfe 99.2 6.5E-10 2.2E-14 110.5 18.5 133 312-468 164-315 (342)
34 2r60_A Glycosyl transferase, g 99.2 8.8E-09 3E-13 108.0 27.7 86 366-463 334-430 (499)
35 3beo_A UDP-N-acetylglucosamine 99.2 6.5E-10 2.2E-14 111.8 18.3 135 308-463 204-348 (375)
36 2jjm_A Glycosyl transferase, g 99.2 6.2E-08 2.1E-12 98.1 31.9 218 248-496 154-386 (394)
37 2iw1_A Lipopolysaccharide core 99.0 2E-07 6.9E-12 93.2 26.0 139 309-468 195-348 (374)
38 2x6q_A Trehalose-synthase TRET 98.9 3.2E-07 1.1E-11 93.5 25.5 84 366-463 292-385 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.8 3.2E-08 1.1E-12 100.2 12.8 130 309-460 203-345 (385)
40 1rzu_A Glycogen synthase 1; gl 98.7 4.6E-06 1.6E-10 86.8 24.7 161 311-496 292-476 (485)
41 2qzs_A Glycogen synthase; glyc 98.6 1.1E-05 3.6E-10 84.0 26.3 169 310-502 292-483 (485)
42 2vsy_A XCC0866; transferase, g 98.6 5.4E-05 1.9E-09 80.3 31.6 121 367-497 434-561 (568)
43 3s28_A Sucrose synthase 1; gly 98.6 1E-05 3.4E-10 89.0 24.5 87 366-464 639-741 (816)
44 3oy2_A Glycosyltransferase B73 98.5 5.6E-05 1.9E-09 76.6 26.9 111 369-496 256-391 (413)
45 2f9f_A First mannosyl transfer 98.3 1.7E-06 5.7E-11 77.3 9.7 139 311-468 24-174 (177)
46 2hy7_A Glucuronosyltransferase 98.3 0.00016 5.4E-09 73.5 24.2 76 366-459 264-354 (406)
47 2xci_A KDO-transferase, 3-deox 98.1 0.00033 1.1E-08 70.3 20.9 93 368-470 261-362 (374)
48 4gyw_A UDP-N-acetylglucosamine 97.8 0.00019 6.7E-09 78.3 15.3 144 308-464 521-675 (723)
49 3q3e_A HMW1C-like glycosyltran 97.7 0.00019 6.3E-09 75.7 12.2 141 310-465 441-596 (631)
50 2bfw_A GLGA glycogen synthase; 97.5 0.0018 6.3E-08 58.0 14.1 83 368-463 96-187 (200)
51 3qhp_A Type 1 capsular polysac 97.5 0.0011 3.6E-08 57.7 12.1 133 310-464 2-147 (166)
52 3tov_A Glycosyl transferase fa 97.3 0.0047 1.6E-07 61.2 15.4 105 2-133 7-115 (349)
53 1psw_A ADP-heptose LPS heptosy 97.1 0.063 2.2E-06 52.5 22.0 102 4-133 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 96.9 0.0015 5.2E-08 64.4 6.9 109 368-492 215-337 (339)
55 2gt1_A Lipopolysaccharide hept 95.8 0.2 6.9E-06 48.5 15.3 136 308-458 177-323 (326)
56 2x0d_A WSAF; GT4 family, trans 95.3 0.015 5.1E-07 59.0 5.4 85 366-463 294-385 (413)
57 3vue_A GBSS-I, granule-bound s 94.6 0.15 5.1E-06 53.4 10.7 137 310-456 327-476 (536)
58 1g5t_A COB(I)alamin adenosyltr 89.2 2.6 9E-05 37.4 10.3 98 3-117 28-130 (196)
59 3vue_A GBSS-I, granule-bound s 84.3 0.64 2.2E-05 48.6 3.9 39 3-41 9-53 (536)
60 1ccw_A Protein (glutamate muta 82.5 1.9 6.6E-05 35.9 5.5 47 1-47 1-47 (137)
61 3qxc_A Dethiobiotin synthetase 79.8 3.9 0.00013 37.7 7.1 36 3-38 20-57 (242)
62 4dzz_A Plasmid partitioning pr 79.7 12 0.0004 32.7 10.2 82 4-116 1-84 (206)
63 2phj_A 5'-nucleotidase SURE; S 79.6 4.9 0.00017 37.1 7.6 113 4-136 2-127 (251)
64 3fgn_A Dethiobiotin synthetase 79.5 5.9 0.0002 36.7 8.3 121 3-139 25-168 (251)
65 2bw0_A 10-FTHFDH, 10-formyltet 78.8 9.1 0.00031 37.0 9.7 34 1-39 20-53 (329)
66 3of5_A Dethiobiotin synthetase 77.6 5.7 0.00019 36.1 7.5 36 3-38 3-40 (228)
67 3t5t_A Putative glycosyltransf 77.5 8.7 0.0003 39.4 9.5 109 368-495 353-473 (496)
68 2yxb_A Coenzyme B12-dependent 77.1 16 0.00056 31.1 9.8 109 3-133 18-126 (161)
69 3nb0_A Glycogen [starch] synth 76.5 14 0.00049 39.3 10.9 47 367-415 490-552 (725)
70 3bfv_A CAPA1, CAPB2, membrane 76.1 16 0.00053 34.1 10.3 39 3-41 81-121 (271)
71 3iqw_A Tail-anchored protein t 75.0 15 0.00053 35.4 10.2 40 4-43 16-56 (334)
72 3zqu_A Probable aromatic acid 74.6 3.5 0.00012 37.0 5.0 48 1-49 1-49 (209)
73 2x0d_A WSAF; GT4 family, trans 74.4 1.6 5.3E-05 43.9 2.9 39 3-41 46-89 (413)
74 2q5c_A NTRC family transcripti 74.2 13 0.00045 32.8 8.7 46 90-141 128-173 (196)
75 3q0i_A Methionyl-tRNA formyltr 72.5 18 0.00063 34.6 9.9 35 1-40 5-39 (318)
76 2wqk_A 5'-nucleotidase SURE; S 72.0 4.1 0.00014 37.8 4.9 100 18-136 15-127 (251)
77 3la6_A Tyrosine-protein kinase 71.8 14 0.00047 34.9 8.7 40 3-42 91-132 (286)
78 1uqt_A Alpha, alpha-trehalose- 71.7 18 0.00062 36.8 10.3 107 369-495 333-454 (482)
79 3cio_A ETK, tyrosine-protein k 71.6 19 0.00066 34.0 9.8 39 3-41 103-143 (299)
80 3igf_A ALL4481 protein; two-do 71.5 7.8 0.00027 38.2 7.1 36 4-39 2-38 (374)
81 3q9l_A Septum site-determining 71.2 16 0.00056 33.2 9.1 31 11-41 11-41 (260)
82 3io3_A DEHA2D07832P; chaperone 70.1 14 0.00047 36.0 8.5 40 3-42 17-59 (348)
83 4dim_A Phosphoribosylglycinami 69.2 19 0.00066 35.4 9.7 36 1-41 5-40 (403)
84 2ywr_A Phosphoribosylglycinami 67.0 31 0.0011 30.9 9.7 103 4-137 2-111 (216)
85 3ug7_A Arsenical pump-driving 66.8 17 0.00059 35.2 8.5 45 5-50 27-72 (349)
86 1xmp_A PURE, phosphoribosylami 66.1 63 0.0021 27.6 11.2 145 309-477 11-165 (170)
87 2iz6_A Molybdenum cofactor car 66.0 29 0.001 30.0 8.9 134 297-455 35-172 (176)
88 4a1f_A DNAB helicase, replicat 65.1 9.1 0.00031 37.1 6.0 43 6-48 49-91 (338)
89 3auf_A Glycinamide ribonucleot 64.5 61 0.0021 29.3 11.1 103 4-137 23-132 (229)
90 3qjg_A Epidermin biosynthesis 63.8 8 0.00027 33.6 4.8 43 4-47 6-48 (175)
91 1id1_A Putative potassium chan 62.8 6.8 0.00023 32.8 4.2 35 1-40 1-35 (153)
92 3zq6_A Putative arsenical pump 62.5 15 0.00051 35.2 7.0 44 5-49 15-59 (324)
93 4gi5_A Quinone reductase; prot 62.3 11 0.00038 35.5 5.8 38 1-38 20-60 (280)
94 3av3_A Phosphoribosylglycinami 61.8 63 0.0021 28.7 10.6 107 4-137 4-113 (212)
95 3lqk_A Dipicolinate synthase s 61.1 7.7 0.00026 34.6 4.3 43 3-46 7-50 (201)
96 2ixd_A LMBE-related protein; h 60.7 14 0.00048 33.9 6.1 38 1-39 1-39 (242)
97 1y80_A Predicted cobalamin bin 60.7 13 0.00045 33.1 5.9 47 3-49 88-134 (210)
98 1j9j_A Stationary phase surviV 60.3 30 0.001 31.8 8.2 113 4-136 1-128 (247)
99 3oow_A Phosphoribosylaminoimid 60.1 80 0.0027 26.9 10.2 144 310-478 6-160 (166)
100 3dm5_A SRP54, signal recogniti 59.9 33 0.0011 34.5 9.2 41 5-45 102-142 (443)
101 4ds3_A Phosphoribosylglycinami 59.2 30 0.001 30.9 7.8 106 1-137 5-117 (209)
102 3bgw_A DNAB-like replicative h 58.9 22 0.00074 35.9 7.7 43 5-47 199-241 (444)
103 2e6c_A 5'-nucleotidase SURE; S 58.7 37 0.0013 31.1 8.5 111 4-136 1-129 (244)
104 1l5x_A SurviVal protein E; str 58.7 34 0.0012 32.0 8.5 112 4-136 1-127 (280)
105 3l7i_A Teichoic acid biosynthe 57.8 45 0.0015 35.8 10.5 107 373-491 605-716 (729)
106 2woo_A ATPase GET3; tail-ancho 57.4 41 0.0014 32.1 9.2 46 4-50 19-65 (329)
107 3tqr_A Phosphoribosylglycinami 56.5 42 0.0014 30.0 8.4 106 1-137 1-114 (215)
108 2ejb_A Probable aromatic acid 56.0 16 0.00056 32.1 5.5 44 4-48 2-45 (189)
109 2i2x_B MTAC, methyltransferase 55.8 17 0.00056 33.7 5.8 44 3-46 123-166 (258)
110 1mvl_A PPC decarboxylase athal 55.8 13 0.00043 33.4 4.7 45 2-48 18-62 (209)
111 1sbz_A Probable aromatic acid 55.4 11 0.00038 33.4 4.3 45 4-49 1-46 (197)
112 3mcu_A Dipicolinate synthase, 55.1 12 0.0004 33.5 4.4 44 2-46 4-48 (207)
113 3dfz_A SIRC, precorrin-2 dehyd 54.4 1.2E+02 0.0041 27.1 11.2 143 308-473 31-185 (223)
114 3rg8_A Phosphoribosylaminoimid 53.8 1E+02 0.0034 26.1 10.0 139 310-474 3-149 (159)
115 1kjn_A MTH0777; hypotethical p 53.3 16 0.00056 30.5 4.6 47 3-49 6-54 (157)
116 4grd_A N5-CAIR mutase, phospho 52.7 1E+02 0.0035 26.4 9.6 145 308-475 11-164 (173)
117 1g63_A Epidermin modifying enz 52.5 11 0.00038 32.9 3.8 46 1-48 1-46 (181)
118 3tov_A Glycosyl transferase fa 52.5 56 0.0019 31.4 9.3 99 4-136 186-288 (349)
119 1fmt_A Methionyl-tRNA FMet for 52.3 80 0.0027 30.0 10.2 34 2-40 2-35 (314)
120 3sc4_A Short chain dehydrogena 51.9 74 0.0025 29.4 9.9 36 3-41 8-43 (285)
121 2zts_A Putative uncharacterize 51.8 69 0.0024 28.4 9.4 45 5-49 32-77 (251)
122 3trh_A Phosphoribosylaminoimid 50.6 1.1E+02 0.0037 26.2 9.4 142 309-474 6-157 (169)
123 3ezx_A MMCP 1, monomethylamine 50.4 25 0.00086 31.5 5.9 46 3-48 92-137 (215)
124 3oid_A Enoyl-[acyl-carrier-pro 50.3 41 0.0014 30.6 7.6 36 1-39 1-36 (258)
125 3gpi_A NAD-dependent epimerase 49.9 17 0.00058 33.7 5.0 35 1-40 1-35 (286)
126 3nrc_A Enoyl-[acyl-carrier-pro 49.7 58 0.002 29.9 8.7 42 4-47 26-68 (280)
127 3ghy_A Ketopantoate reductase 49.6 15 0.0005 35.4 4.6 43 1-48 1-43 (335)
128 1jkx_A GART;, phosphoribosylgl 49.6 94 0.0032 27.6 9.6 102 4-137 1-110 (212)
129 2r8r_A Sensor protein; KDPD, P 49.2 20 0.00068 32.5 5.0 39 3-41 6-44 (228)
130 3kuu_A Phosphoribosylaminoimid 47.0 1.4E+02 0.0047 25.6 9.7 146 310-478 13-167 (174)
131 2h31_A Multifunctional protein 46.8 1.9E+02 0.0065 28.6 12.0 140 309-474 265-412 (425)
132 1p3y_1 MRSD protein; flavoprot 46.6 9.2 0.00031 33.8 2.3 45 3-48 8-52 (194)
133 2q6t_A DNAB replication FORK h 46.2 29 0.00098 34.9 6.2 43 6-48 203-246 (444)
134 1qzu_A Hypothetical protein MD 46.0 14 0.00048 33.0 3.4 46 2-48 18-64 (206)
135 1yt5_A Inorganic polyphosphate 45.9 13 0.00043 34.5 3.2 52 386-457 42-96 (258)
136 1u11_A PURE (N5-carboxyaminoim 45.6 1.5E+02 0.0051 25.6 11.8 146 309-478 21-176 (182)
137 3gi1_A LBP, laminin-binding pr 45.5 89 0.003 29.1 9.2 79 32-136 179-259 (286)
138 4b4o_A Epimerase family protei 45.4 21 0.00071 33.3 4.8 33 4-40 1-33 (298)
139 2xxa_A Signal recognition part 45.1 67 0.0023 32.1 8.7 39 5-43 102-141 (433)
140 1q57_A DNA primase/helicase; d 45.1 34 0.0012 34.9 6.7 42 6-47 245-287 (503)
141 2vo1_A CTP synthase 1; pyrimid 45.0 20 0.00068 33.3 4.3 43 1-43 20-65 (295)
142 3gem_A Short chain dehydrogena 44.9 57 0.002 29.7 7.7 35 4-41 27-61 (260)
143 1psw_A ADP-heptose LPS heptosy 43.8 1.8E+02 0.0062 27.2 11.5 101 5-135 182-287 (348)
144 3tqq_A Methionyl-tRNA formyltr 43.4 71 0.0024 30.4 8.2 34 3-41 2-35 (314)
145 1pno_A NAD(P) transhydrogenase 43.4 28 0.00097 29.6 4.6 37 3-41 23-64 (180)
146 3vot_A L-amino acid ligase, BL 43.2 38 0.0013 33.5 6.6 97 1-131 1-101 (425)
147 1ihu_A Arsenical pump-driving 43.1 55 0.0019 34.0 8.1 45 4-49 8-53 (589)
148 1d4o_A NADP(H) transhydrogenas 42.9 29 0.00099 29.7 4.6 36 3-40 22-62 (184)
149 2i2c_A Probable inorganic poly 42.2 16 0.00056 34.0 3.4 52 386-457 36-93 (272)
150 3i83_A 2-dehydropantoate 2-red 41.9 41 0.0014 31.9 6.4 40 4-49 3-42 (320)
151 2r85_A PURP protein PF1517; AT 41.3 24 0.00081 33.5 4.6 35 2-42 1-35 (334)
152 1o4v_A Phosphoribosylaminoimid 40.6 1.8E+02 0.0061 25.1 12.4 142 309-476 13-164 (183)
153 3hn2_A 2-dehydropantoate 2-red 40.6 43 0.0015 31.6 6.2 40 4-49 3-42 (312)
154 4b4k_A N5-carboxyaminoimidazol 40.4 1.8E+02 0.0061 25.1 12.9 145 309-477 22-176 (181)
155 2fsv_C NAD(P) transhydrogenase 40.4 32 0.0011 30.0 4.6 35 4-40 47-86 (203)
156 1djl_A Transhydrogenase DIII; 40.2 33 0.0011 30.0 4.6 35 4-40 46-85 (207)
157 1hdo_A Biliverdin IX beta redu 40.0 36 0.0012 29.2 5.3 36 1-40 1-36 (206)
158 3ksu_A 3-oxoacyl-acyl carrier 39.6 47 0.0016 30.3 6.2 33 4-39 11-43 (262)
159 3dhn_A NAD-dependent epimerase 39.5 22 0.00074 31.5 3.7 37 1-41 1-38 (227)
160 3kjh_A CO dehydrogenase/acetyl 39.5 22 0.00076 31.9 3.8 44 4-48 1-44 (254)
161 2vqe_B 30S ribosomal protein S 39.4 1E+02 0.0036 28.2 8.2 32 106-137 157-190 (256)
162 2lpm_A Two-component response 39.4 21 0.00071 28.8 3.2 30 106-135 52-86 (123)
163 1p9o_A Phosphopantothenoylcyst 39.2 20 0.00069 34.2 3.5 37 6-42 40-90 (313)
164 2bru_C NAD(P) transhydrogenase 38.3 34 0.0011 29.3 4.3 36 3-40 30-70 (186)
165 4da9_A Short-chain dehydrogena 38.0 90 0.0031 28.7 8.0 33 4-39 29-61 (280)
166 3gl9_A Response regulator; bet 37.8 42 0.0014 26.0 4.9 33 106-138 45-86 (122)
167 2w84_A Peroxisomal membrane pr 37.7 31 0.0011 24.7 3.4 51 442-495 12-62 (70)
168 2r6a_A DNAB helicase, replicat 37.6 53 0.0018 32.9 6.7 43 5-47 205-248 (454)
169 1bg6_A N-(1-D-carboxylethyl)-L 37.5 25 0.00086 33.8 4.1 35 1-40 2-36 (359)
170 3da8_A Probable 5'-phosphoribo 37.0 82 0.0028 28.1 7.1 107 3-137 12-120 (215)
171 3uf0_A Short-chain dehydrogena 37.0 1.8E+02 0.0063 26.4 10.0 34 4-40 31-64 (273)
172 3s55_A Putative short-chain de 36.8 74 0.0025 29.2 7.1 35 3-40 9-43 (281)
173 2o1e_A YCDH; alpha-beta protei 36.8 1.5E+02 0.005 28.0 9.3 80 31-136 189-270 (312)
174 3u7q_B Nitrogenase molybdenum- 36.8 53 0.0018 33.7 6.6 27 106-135 437-470 (523)
175 1rcu_A Conserved hypothetical 36.5 2.2E+02 0.0074 24.9 10.2 97 297-413 48-150 (195)
176 1xrs_B D-lysine 5,6-aminomutas 36.5 72 0.0025 29.5 6.7 47 3-49 120-175 (262)
177 2yvq_A Carbamoyl-phosphate syn 36.5 64 0.0022 26.6 5.9 96 7-133 27-130 (143)
178 4g81_D Putative hexonate dehyd 36.5 1.1E+02 0.0039 27.9 8.2 34 3-39 8-41 (255)
179 3ged_A Short-chain dehydrogena 36.3 1.2E+02 0.0042 27.5 8.3 35 1-40 1-35 (247)
180 3gk3_A Acetoacetyl-COA reducta 36.1 77 0.0026 28.8 7.1 35 3-40 24-58 (269)
181 3h7a_A Short chain dehydrogena 36.1 1.8E+02 0.0061 26.0 9.6 35 3-40 6-40 (252)
182 3pxx_A Carveol dehydrogenase; 36.0 78 0.0027 29.0 7.2 35 3-40 9-43 (287)
183 4fn4_A Short chain dehydrogena 36.0 1.2E+02 0.0042 27.6 8.4 35 3-40 6-40 (254)
184 3pdi_A Nitrogenase MOFE cofact 35.6 71 0.0024 32.4 7.2 26 106-134 400-425 (483)
185 3zzm_A Bifunctional purine bio 35.4 89 0.003 31.7 7.6 98 3-118 9-113 (523)
186 2bln_A Protein YFBG; transfera 35.2 1.1E+02 0.0036 29.0 8.0 33 4-41 1-33 (305)
187 4e5s_A MCCFLIKE protein (BA_56 35.0 46 0.0016 32.0 5.4 73 322-413 62-136 (331)
188 3v8b_A Putative dehydrogenase, 34.7 1.1E+02 0.0037 28.2 8.0 35 3-40 27-61 (283)
189 1meo_A Phosophoribosylglycinam 34.5 2.4E+02 0.0082 24.8 10.7 103 4-137 1-110 (209)
190 4gkb_A 3-oxoacyl-[acyl-carrier 34.2 1.2E+02 0.0041 27.7 8.0 36 3-41 6-41 (258)
191 3oig_A Enoyl-[acyl-carrier-pro 34.0 1.5E+02 0.005 26.7 8.7 37 3-40 6-42 (266)
192 2hy5_A Putative sulfurtransfer 33.9 54 0.0018 26.4 5.0 39 5-43 2-44 (130)
193 3rfo_A Methionyl-tRNA formyltr 33.7 1.7E+02 0.0059 27.7 9.2 34 3-41 4-37 (317)
194 1mio_A Nitrogenase molybdenum 33.3 1.5E+02 0.0052 30.4 9.3 33 93-134 448-480 (533)
195 3v2h_A D-beta-hydroxybutyrate 33.1 1.2E+02 0.0042 27.8 8.0 33 4-39 25-57 (281)
196 3pgx_A Carveol dehydrogenase; 32.9 1.4E+02 0.0046 27.3 8.3 33 4-39 15-47 (280)
197 1qgu_B Protein (nitrogenase mo 32.8 1E+02 0.0036 31.5 8.0 26 106-134 433-465 (519)
198 3kl4_A SRP54, signal recogniti 32.7 53 0.0018 32.8 5.6 41 4-44 97-138 (433)
199 2pn1_A Carbamoylphosphate synt 32.5 49 0.0017 31.2 5.2 35 1-41 2-38 (331)
200 3ucx_A Short chain dehydrogena 32.1 1.1E+02 0.0036 27.8 7.3 34 4-40 11-44 (264)
201 3e8x_A Putative NAD-dependent 32.0 1.1E+02 0.0039 26.9 7.4 36 3-42 21-56 (236)
202 2qsb_A UPF0147 protein TA0600; 31.9 83 0.0028 23.6 5.0 55 446-503 14-72 (89)
203 3trh_A Phosphoribosylaminoimid 31.7 77 0.0026 27.1 5.5 45 1-46 4-50 (169)
204 1lss_A TRK system potassium up 31.7 49 0.0017 26.3 4.4 34 2-40 3-36 (140)
205 1ehi_A LMDDL2, D-alanine:D-lac 31.7 36 0.0012 33.2 4.2 40 1-40 1-45 (377)
206 3kcq_A Phosphoribosylglycinami 31.6 1.6E+02 0.0053 26.2 8.0 105 1-137 5-113 (215)
207 4h1h_A LMO1638 protein; MCCF-l 31.5 56 0.0019 31.2 5.4 72 323-413 63-136 (327)
208 3s2u_A UDP-N-acetylglucosamine 31.4 1.1E+02 0.0039 29.2 7.8 26 383-410 92-120 (365)
209 3kkl_A Probable chaperone prot 30.8 72 0.0025 29.0 5.8 40 1-40 1-51 (244)
210 3qvl_A Putative hydantoin race 30.7 93 0.0032 28.3 6.5 30 106-135 68-98 (245)
211 3l4e_A Uncharacterized peptida 30.6 70 0.0024 28.3 5.5 45 299-343 18-62 (206)
212 3qlj_A Short chain dehydrogena 30.5 2.6E+02 0.009 26.0 10.1 33 4-39 27-59 (322)
213 3uve_A Carveol dehydrogenase ( 30.4 1.2E+02 0.004 27.9 7.4 33 4-39 11-43 (286)
214 1jx7_A Hypothetical protein YC 30.3 38 0.0013 26.4 3.4 46 1-46 1-49 (117)
215 3mc3_A DSRE/DSRF-like family p 30.3 76 0.0026 25.7 5.3 41 4-44 16-59 (134)
216 3to5_A CHEY homolog; alpha(5)b 30.2 48 0.0016 27.0 4.0 41 94-137 47-96 (134)
217 2pju_A Propionate catabolism o 30.0 57 0.002 29.4 4.8 41 90-136 140-180 (225)
218 3r3s_A Oxidoreductase; structu 30.0 64 0.0022 30.0 5.5 34 4-40 49-82 (294)
219 1qkk_A DCTD, C4-dicarboxylate 30.0 1.2E+02 0.004 24.3 6.7 51 404-460 74-124 (155)
220 1mio_B Nitrogenase molybdenum 29.9 2E+02 0.0068 28.7 9.5 26 106-134 384-409 (458)
221 3tl3_A Short-chain type dehydr 29.8 1.3E+02 0.0044 27.0 7.5 34 3-39 8-41 (257)
222 2qs7_A Uncharacterized protein 29.7 68 0.0023 26.5 5.0 44 5-48 9-53 (144)
223 4gmf_A Yersiniabactin biosynth 29.6 77 0.0026 30.9 6.1 129 305-454 4-141 (372)
224 3ouz_A Biotin carboxylase; str 29.5 1.3E+02 0.0045 29.7 8.1 35 1-40 4-38 (446)
225 3t6k_A Response regulator rece 29.2 64 0.0022 25.5 4.7 33 106-138 47-88 (136)
226 4g9b_A Beta-PGM, beta-phosphog 29.1 2.3E+02 0.0079 24.9 9.1 95 20-136 100-194 (243)
227 2a33_A Hypothetical protein; s 29.1 2E+02 0.0067 25.5 8.2 101 299-413 37-147 (215)
228 3ijr_A Oxidoreductase, short c 29.0 2.2E+02 0.0075 26.1 9.1 35 4-41 47-81 (291)
229 3s40_A Diacylglycerol kinase; 28.9 60 0.002 30.5 5.1 81 311-414 12-98 (304)
230 3f6p_A Transcriptional regulat 28.7 77 0.0026 24.3 5.0 33 106-138 45-83 (120)
231 2gk4_A Conserved hypothetical 28.6 39 0.0013 30.6 3.5 23 19-41 31-53 (232)
232 2dzd_A Pyruvate carboxylase; b 28.6 2.6E+02 0.009 27.6 10.2 32 5-41 8-39 (461)
233 3lrx_A Putative hydrogenase; a 28.6 39 0.0014 28.3 3.3 35 4-41 24-58 (158)
234 2xj4_A MIPZ; replication, cell 28.5 56 0.0019 30.3 4.7 41 1-41 1-43 (286)
235 1e4e_A Vancomycin/teicoplanin 28.4 31 0.0011 33.0 3.0 39 1-40 1-44 (343)
236 3bul_A Methionine synthase; tr 28.3 69 0.0023 33.3 5.7 47 3-49 98-144 (579)
237 3t7c_A Carveol dehydrogenase; 28.2 1.3E+02 0.0043 28.0 7.2 34 4-40 28-61 (299)
238 2ew2_A 2-dehydropantoate 2-red 28.2 47 0.0016 31.0 4.2 35 1-40 1-35 (316)
239 1qyc_A Phenylcoumaran benzylic 28.2 40 0.0014 31.3 3.7 37 1-41 1-38 (308)
240 3hwr_A 2-dehydropantoate 2-red 28.0 58 0.002 30.8 4.8 42 3-49 19-60 (318)
241 1qyd_A Pinoresinol-lariciresin 27.9 41 0.0014 31.3 3.7 37 1-41 1-38 (313)
242 4e3z_A Putative oxidoreductase 27.8 65 0.0022 29.4 5.0 36 1-39 23-58 (272)
243 3g1w_A Sugar ABC transporter; 27.8 3.4E+02 0.012 24.5 11.4 31 106-136 60-94 (305)
244 1j8m_F SRP54, signal recogniti 27.8 2.2E+02 0.0075 26.5 8.8 38 6-43 101-138 (297)
245 2fb6_A Conserved hypothetical 27.8 54 0.0018 26.1 3.8 44 1-44 4-52 (117)
246 2i87_A D-alanine-D-alanine lig 27.6 27 0.00091 33.9 2.3 40 1-40 1-44 (364)
247 3enk_A UDP-glucose 4-epimerase 27.1 50 0.0017 31.1 4.2 35 1-39 2-37 (341)
248 3sju_A Keto reductase; short-c 27.1 57 0.002 30.0 4.5 37 1-40 21-57 (279)
249 2qzg_A Conserved uncharacteriz 27.1 95 0.0032 23.6 4.7 53 448-503 20-76 (94)
250 3gdg_A Probable NADP-dependent 27.1 1.9E+02 0.0065 25.9 8.2 36 4-41 20-56 (267)
251 2qv7_A Diacylglycerol kinase D 27.1 68 0.0023 30.6 5.1 69 324-414 41-115 (337)
252 3lp6_A Phosphoribosylaminoimid 27.0 3E+02 0.01 23.5 11.5 141 309-474 7-156 (174)
253 3pnx_A Putative sulfurtransfer 27.0 98 0.0034 26.2 5.5 48 1-48 2-50 (160)
254 3m6m_D Sensory/regulatory prot 26.6 58 0.002 26.1 4.0 32 106-137 57-99 (143)
255 2g1u_A Hypothetical protein TM 26.6 84 0.0029 25.8 5.1 34 3-41 19-52 (155)
256 1e2b_A Enzyme IIB-cellobiose; 26.4 97 0.0033 24.0 5.0 39 1-39 1-39 (106)
257 3ib6_A Uncharacterized protein 26.4 2.9E+02 0.0098 23.2 11.4 103 20-137 39-144 (189)
258 1zl0_A Hypothetical protein PA 26.3 83 0.0028 29.8 5.5 74 322-414 64-139 (311)
259 3cx3_A Lipoprotein; zinc-bindi 26.2 1.4E+02 0.0049 27.6 7.1 41 93-136 215-257 (284)
260 1dhr_A Dihydropteridine reduct 26.2 66 0.0023 28.7 4.7 35 3-40 6-40 (241)
261 1xp8_A RECA protein, recombina 26.2 73 0.0025 31.0 5.2 40 5-44 76-115 (366)
262 4gbj_A 6-phosphogluconate dehy 26.0 62 0.0021 30.4 4.6 32 1-38 4-35 (297)
263 2d1p_A TUSD, hypothetical UPF0 26.0 1E+02 0.0035 25.3 5.4 39 3-41 12-54 (140)
264 3ors_A N5-carboxyaminoimidazol 25.9 3E+02 0.01 23.2 10.8 141 309-474 3-154 (163)
265 3lyu_A Putative hydrogenase; t 25.9 43 0.0015 27.5 3.0 35 4-41 19-53 (142)
266 2lnd_A De novo designed protei 25.9 50 0.0017 24.2 2.9 49 403-456 49-100 (112)
267 3sr3_A Microcin immunity prote 25.8 73 0.0025 30.6 5.1 72 323-413 64-137 (336)
268 3l8h_A Putative haloacid dehal 25.4 2.8E+02 0.0096 22.7 10.5 23 20-42 32-54 (179)
269 2l82_A Designed protein OR32; 25.4 1.2E+02 0.0041 23.6 5.1 34 311-348 3-36 (162)
270 3obi_A Formyltetrahydrofolate 25.4 3.8E+02 0.013 24.9 9.8 102 327-455 155-260 (288)
271 3kvo_A Hydroxysteroid dehydrog 25.3 3.3E+02 0.011 25.8 9.8 35 4-41 45-79 (346)
272 2an1_A Putative kinase; struct 25.1 41 0.0014 31.4 3.1 26 387-412 65-94 (292)
273 4hb9_A Similarities with proba 25.0 54 0.0018 31.7 4.1 30 3-37 1-30 (412)
274 4iiu_A 3-oxoacyl-[acyl-carrier 25.0 1.6E+02 0.0054 26.6 7.1 33 5-40 27-59 (267)
275 3nrb_A Formyltetrahydrofolate 24.8 3.2E+02 0.011 25.3 9.2 101 328-455 155-259 (287)
276 3li6_A Calcium-binding protein 24.8 1.1E+02 0.0036 20.3 4.6 53 435-492 10-62 (66)
277 2d1p_B TUSC, hypothetical UPF0 24.7 95 0.0032 24.5 4.8 42 1-43 1-44 (119)
278 3da8_A Probable 5'-phosphoribo 24.6 3.6E+02 0.012 23.8 9.3 102 326-454 77-182 (215)
279 3sbx_A Putative uncharacterize 24.5 1.3E+02 0.0045 26.2 6.0 100 299-413 36-146 (189)
280 1b93_A Protein (methylglyoxal 24.5 2.2E+02 0.0076 23.7 7.1 95 4-134 12-119 (152)
281 1iow_A DD-ligase, DDLB, D-ALA\ 24.5 93 0.0032 28.7 5.5 39 2-40 1-43 (306)
282 3lou_A Formyltetrahydrofolate 24.4 4E+02 0.014 24.7 9.8 101 328-455 161-265 (292)
283 1u94_A RECA protein, recombina 24.4 1.2E+02 0.0042 29.2 6.5 39 5-43 65-103 (356)
284 1dbw_A Transcriptional regulat 24.2 1E+02 0.0034 23.7 4.9 34 106-139 46-86 (126)
285 4fu0_A D-alanine--D-alanine li 24.1 37 0.0013 32.8 2.6 38 1-38 1-42 (357)
286 2q2v_A Beta-D-hydroxybutyrate 23.9 2.4E+02 0.0082 25.1 8.2 35 5-42 5-39 (255)
287 3i6i_A Putative leucoanthocyan 23.8 55 0.0019 31.1 3.8 37 1-41 8-44 (346)
288 2nly_A BH1492 protein, diverge 23.8 4.1E+02 0.014 24.0 9.5 39 90-133 114-155 (245)
289 3c3m_A Response regulator rece 23.7 93 0.0032 24.5 4.7 32 106-137 46-86 (138)
290 3gt7_A Sensor protein; structu 23.6 96 0.0033 25.0 4.9 32 106-137 50-90 (154)
291 1pq4_A Periplasmic binding pro 23.5 4E+02 0.014 24.5 9.8 79 32-138 190-270 (291)
292 2bon_A Lipid kinase; DAG kinas 23.5 1.2E+02 0.004 28.9 6.1 68 325-414 44-119 (332)
293 3ty2_A 5'-nucleotidase SURE; s 23.3 89 0.003 28.8 4.8 58 3-66 11-68 (261)
294 3hr8_A Protein RECA; alpha and 23.2 1.2E+02 0.0041 29.3 6.1 38 6-43 64-101 (356)
295 3n0v_A Formyltetrahydrofolate 23.1 4.4E+02 0.015 24.4 9.8 101 328-455 156-260 (286)
296 2z1m_A GDP-D-mannose dehydrata 23.1 77 0.0026 29.7 4.7 37 1-41 1-37 (345)
297 3m1a_A Putative dehydrogenase; 23.1 89 0.0031 28.5 5.0 37 1-40 1-38 (281)
298 4egb_A DTDP-glucose 4,6-dehydr 22.9 1.6E+02 0.0056 27.5 7.1 32 4-39 25-58 (346)
299 1u0t_A Inorganic polyphosphate 22.9 43 0.0015 31.7 2.8 28 386-413 76-107 (307)
300 3end_A Light-independent proto 22.8 83 0.0028 29.3 4.8 39 3-41 40-79 (307)
301 3afo_A NADH kinase POS5; alpha 22.6 51 0.0018 32.4 3.3 34 377-412 108-146 (388)
302 1wcv_1 SOJ, segregation protei 22.5 74 0.0025 28.8 4.3 40 3-42 5-46 (257)
303 1e6u_A GDP-fucose synthetase; 22.5 51 0.0017 30.8 3.2 35 1-39 1-35 (321)
304 3llv_A Exopolyphosphatase-rela 22.4 59 0.002 26.2 3.2 32 4-40 7-38 (141)
305 3k96_A Glycerol-3-phosphate de 22.4 61 0.0021 31.4 3.8 33 3-40 29-61 (356)
306 1pjq_A CYSG, siroheme synthase 22.2 5.8E+02 0.02 25.2 12.8 143 309-473 13-167 (457)
307 1g3q_A MIND ATPase, cell divis 22.2 66 0.0022 28.5 3.8 37 6-42 5-42 (237)
308 3o1l_A Formyltetrahydrofolate 22.1 4.9E+02 0.017 24.3 11.3 105 324-455 167-275 (302)
309 1rw7_A YDR533CP; alpha-beta sa 22.1 1.6E+02 0.0053 26.5 6.4 41 1-41 1-52 (243)
310 2rjn_A Response regulator rece 22.1 1.2E+02 0.004 24.4 5.1 43 93-138 40-89 (154)
311 3ew7_A LMO0794 protein; Q8Y8U8 22.0 94 0.0032 26.8 4.8 34 4-41 1-34 (221)
312 3h2s_A Putative NADH-flavin re 21.8 96 0.0033 26.9 4.8 34 4-41 1-34 (224)
313 3o26_A Salutaridine reductase; 21.8 91 0.0031 28.7 4.9 36 3-41 11-46 (311)
314 1byi_A Dethiobiotin synthase; 21.7 79 0.0027 27.6 4.2 32 6-37 4-36 (224)
315 4iin_A 3-ketoacyl-acyl carrier 21.7 1.1E+02 0.0037 27.8 5.3 35 3-40 28-62 (271)
316 4g6h_A Rotenone-insensitive NA 21.6 47 0.0016 33.9 2.9 35 3-42 42-76 (502)
317 3cky_A 2-hydroxymethyl glutara 21.5 1E+02 0.0036 28.4 5.2 34 1-39 1-35 (301)
318 2bi7_A UDP-galactopyranose mut 21.3 71 0.0024 31.1 4.1 35 1-40 1-35 (384)
319 3osu_A 3-oxoacyl-[acyl-carrier 21.3 1.2E+02 0.004 27.1 5.4 36 1-39 1-36 (246)
320 1cp2_A CP2, nitrogenase iron p 21.2 82 0.0028 28.5 4.3 35 6-40 4-38 (269)
321 1uls_A Putative 3-oxoacyl-acyl 21.2 1.1E+02 0.0037 27.4 5.0 35 3-40 4-38 (245)
322 2vrn_A Protease I, DR1199; cys 21.1 1.9E+02 0.0064 24.5 6.5 40 1-41 7-46 (190)
323 3eod_A Protein HNR; response r 21.1 1.1E+02 0.0038 23.5 4.7 34 106-139 50-90 (130)
324 3tl4_X Glutaminyl-tRNA synthet 21.1 78 0.0027 27.6 3.8 62 421-492 105-177 (187)
325 3l77_A Short-chain alcohol deh 21.1 1E+02 0.0034 27.2 4.8 34 4-40 2-35 (235)
326 2ehd_A Oxidoreductase, oxidore 21.0 1.2E+02 0.004 26.7 5.3 37 1-40 1-38 (234)
327 1gsa_A Glutathione synthetase; 20.8 86 0.0029 29.0 4.4 37 4-40 2-41 (316)
328 3goc_A Endonuclease V; alpha-b 20.7 90 0.0031 28.3 4.2 30 106-135 106-142 (237)
329 3d3j_A Enhancer of mRNA-decapp 20.6 91 0.0031 29.5 4.5 34 4-40 133-168 (306)
330 3auf_A Glycinamide ribonucleot 20.6 4.1E+02 0.014 23.6 8.8 101 327-454 90-194 (229)
331 3fwy_A Light-independent proto 20.5 94 0.0032 29.4 4.6 39 3-41 47-86 (314)
332 3zv4_A CIS-2,3-dihydrobiphenyl 20.5 1.1E+02 0.0038 28.1 5.1 37 1-40 1-38 (281)
333 4e7p_A Response regulator; DNA 20.4 1.3E+02 0.0044 24.0 5.0 44 93-139 55-105 (150)
334 4hn9_A Iron complex transport 20.4 96 0.0033 29.4 4.7 33 106-138 115-147 (335)
335 2afh_E Nitrogenase iron protei 20.3 95 0.0033 28.6 4.6 38 4-41 2-40 (289)
336 3mjf_A Phosphoribosylamine--gl 20.3 1.2E+02 0.0041 30.0 5.6 25 3-32 3-27 (431)
337 2gdz_A NAD+-dependent 15-hydro 20.2 1.2E+02 0.0041 27.4 5.2 33 5-40 8-40 (267)
338 3pdi_B Nitrogenase MOFE cofact 20.2 80 0.0027 31.8 4.3 27 106-135 374-400 (458)
339 3rot_A ABC sugar transporter, 20.2 4.7E+02 0.016 23.4 10.3 31 106-136 60-94 (297)
340 2zyd_A 6-phosphogluconate dehy 20.2 54 0.0019 33.3 3.0 35 1-40 13-47 (480)
341 3eag_A UDP-N-acetylmuramate:L- 20.2 1E+02 0.0035 29.2 4.9 33 3-39 4-36 (326)
342 4e21_A 6-phosphogluconate dehy 20.2 80 0.0027 30.6 4.1 34 1-39 20-53 (358)
343 2qyt_A 2-dehydropantoate 2-red 20.2 61 0.0021 30.3 3.2 32 3-39 8-45 (317)
344 2qxy_A Response regulator; reg 20.1 1.2E+02 0.0041 23.7 4.7 32 106-138 47-85 (142)
345 3lyl_A 3-oxoacyl-(acyl-carrier 20.1 1.3E+02 0.0043 26.8 5.3 37 1-40 1-38 (247)
346 3u0b_A Oxidoreductase, short c 20.0 3.7E+02 0.013 26.7 9.2 41 4-47 213-253 (454)
347 3f67_A Putative dienelactone h 20.0 1.1E+02 0.0039 26.3 4.9 35 5-39 33-67 (241)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8.8e-67 Score=540.50 Aligned_cols=431 Identities=26% Similarity=0.472 Sum_probs=353.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC-CCccCHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDLG 79 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~ 79 (506)
+.||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+.. ....++|+|+.++++++++ +...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 9999999976665553321 0113579999999988876 3323344
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccCCCCCC
Q 010617 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (506)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (506)
..+..+.+.+.+.+++.++++....+.++||||+|++..|+..+|+++|||++.|++++++.+..+.+.+.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~- 168 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSK- 168 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCC-
Confidence 4455555555555666666543221258999999999999999999999999999999999998888866544321000
Q ss_pred CCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHHHHH
Q 010617 160 HGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFD 239 (506)
Q Consensus 160 ~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 239 (506)
..........+|+++.+..+++++ ++.. .....+.+
T Consensus 169 ------------------------------------------~~~~~~~~~~iPg~p~~~~~dlp~-~~~~-~~~~~~~~ 204 (454)
T 3hbf_A 169 ------------------------------------------EVHDVKSIDVLPGFPELKASDLPE-GVIK-DIDVPFAT 204 (454)
T ss_dssp ------------------------------------------HHTTSSCBCCSTTSCCBCGGGSCT-TSSS-CTTSHHHH
T ss_pred ------------------------------------------ccccccccccCCCCCCcChhhCch-hhcc-CCchHHHH
Confidence 000012233578888888899984 3332 33455677
Q ss_pred HHHHHHHhhccccEEEEcCcccccccc----cccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCCceEEEE
Q 010617 240 LLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVS 315 (506)
Q Consensus 240 ~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs 315 (506)
++.+..+.+.+++.+++||+++||++. ++..|++++|||++...... .+..+.++.+||+.++++++||||
T Consensus 205 ~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvs 279 (454)
T 3hbf_A 205 MLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYIS 279 (454)
T ss_dssp HHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEE
T ss_pred HHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEe
Confidence 777888888999999999999999863 45568999999998754321 123467899999998889999999
Q ss_pred eCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccCc
Q 010617 316 FGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGW 395 (506)
Q Consensus 316 ~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~ 395 (506)
|||....+.+++.+++.+|+..+++|||+++.. ..+.+|+++.++.++|+++++|+||.+||+|+++++||||||+
T Consensus 280 fGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~ 355 (454)
T 3hbf_A 280 FGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGW 355 (454)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCH
T ss_pred cCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCc
Confidence 999988889999999999999999999999865 3346889999999999999999999999999999999999999
Q ss_pred hhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHH
Q 010617 396 NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAM 472 (506)
Q Consensus 396 ~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~---~~r~~a~~l~~~~~ 472 (506)
||++||+++|||||++|+++||+.||+++++.+|+|+.++. +.+++++|.++|+++|.|+ +||++|++++++++
T Consensus 356 ~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~ 432 (454)
T 3hbf_A 356 NSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAF 432 (454)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999985599999975 6799999999999999987 89999999999999
Q ss_pred hhhhcCCChHHHHHHHHHHHH
Q 010617 473 SSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 473 ~~~~~gg~~~~~~~~~~~~~~ 493 (506)
+++.+||++.+++++|++++.
T Consensus 433 ~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 433 KAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHTSTTSHHHHHHHHHHHHHT
T ss_pred HhhccCCCHHHHHHHHHHHHh
Confidence 999999999999999999875
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.1e-62 Score=516.30 Aligned_cols=452 Identities=33% Similarity=0.659 Sum_probs=339.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCC-CCCeEEEecCCCCCCCC----Cc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYL-GEQIHLVSIPDGMEPWE----DR 75 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~-~~~i~~~~~~~~~~~~~----~~ 75 (506)
|+++||+|+|+|++||++|++.||++|++|||+|||++++.+...+.+........ .++++|+.++++++..+ ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 34689999999999999999999999999999999999988776664431100001 14899999997766521 12
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHHhcC-CCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccC
Q 010617 76 NDLGKLIEKCLQVMPGKLEELIEEINSR-EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (506)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 154 (506)
.+...++..+...+.+.++++++.+... ++.++||||+|.+..|+..+|+++|||++.++++++.......+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~--- 162 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF--- 162 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH---
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH---
Confidence 3455556655567888999999988642 025899999999999999999999999999999998777655443322
Q ss_pred CCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchh
Q 010617 155 GIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQ 234 (506)
Q Consensus 155 ~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (506)
...+|+|.....+. +.++. ......+|+++.+...+++ .+.......
T Consensus 163 -----------~~~~~~p~~~~~~~-------------------~~~~~--~~~~~~~~~~~~~~~~~l~-~~~~~~~~~ 209 (482)
T 2pq6_A 163 -----------VERGIIPFKDESYL-------------------TNGCL--ETKVDWIPGLKNFRLKDIV-DFIRTTNPN 209 (482)
T ss_dssp -----------HHTTCSSCSSGGGG-------------------TSSGG--GCBCCSSTTCCSCBGGGSC-GGGCCSCTT
T ss_pred -----------HhcCCCCCcccccc-------------------ccccc--cCccccCCCCCCCchHHCc-hhhccCCcc
Confidence 22334443221100 00011 1122234566555555665 333322223
Q ss_pred HHHHHHHHHHHHhhccccEEEEcCcccccccc----cccCCceeeecccccC-CCCCC-----CC-CCCccccchhhhhh
Q 010617 235 KIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIGPLLAS-NRLGN-----TA-GYFWCEDSNCLKWL 303 (506)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~p~v~~VGpl~~~-~~~~~-----~~-~~~~~~~~~l~~~l 303 (506)
+.+.+.+.+..+...+++++|+||+++||++. ++..+++++|||++.. ..... .. ...|+.+.++.+|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wl 289 (482)
T 2pq6_A 210 DIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWL 289 (482)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHH
T ss_pred cHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHH
Confidence 44455555566677889999999999999862 3445899999999863 21100 00 01234566799999
Q ss_pred hcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcC
Q 010617 304 DQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNH 383 (506)
Q Consensus 304 ~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h 383 (506)
+.++++++|||||||......+++..++.+|+..+++|||+++.+...+....+|+++.++.++|+++++|+||.++|+|
T Consensus 290 d~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h 369 (482)
T 2pq6_A 290 ESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNH 369 (482)
T ss_dssp TTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTS
T ss_pred hcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcC
Confidence 99888899999999998778888999999999999999999975421111123788998889999999999999999999
Q ss_pred CCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhh-ccceeeeEeecCCCCCcCHHHHHHHHHHHhCCh---H
Q 010617 384 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYIC-DFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---D 459 (506)
Q Consensus 384 ~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~-~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~---~ 459 (506)
+++++||||||+||++||+++|||+|++|++.||+.||++++ + +|+|+.++ ..+++++|.++|+++|.|+ +
T Consensus 370 ~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~ 444 (482)
T 2pq6_A 370 PSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKK 444 (482)
T ss_dssp TTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHH
Confidence 999999999999999999999999999999999999999997 6 69999996 3589999999999999998 6
Q ss_pred HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHH
Q 010617 460 FKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 460 ~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 493 (506)
||++|+++++++++++.+||++.+++++|++++.
T Consensus 445 ~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 445 MKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999874
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2e-59 Score=492.47 Aligned_cols=434 Identities=30% Similarity=0.504 Sum_probs=326.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCc--chhHHHHhhhcCCCCCCCeEEEecCCCCCCC-CCccCH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDY--NHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDL 78 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 78 (506)
++||+++|+|++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|+.++....+. ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 99999999987 3444443210 012489999998653222 111233
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhcCCCCCc-cEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccCCCC
Q 010617 79 GKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (506)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (506)
...+......+.+.++++++.+.. +.++ ||||+|.+..|+..+|+++|||++.++++++.......+++.+......
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 333334445667788888887642 1578 9999999989999999999999999999998877776665543322110
Q ss_pred CCCC-CCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHH
Q 010617 158 DSHG-MIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKI 236 (506)
Q Consensus 158 ~~~~-~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 236 (506)
+-.+ .+.+ .+|+++.+...+++.. +.... ..
T Consensus 161 ~~~~~~~~~---------------------------------------------~~Pg~~p~~~~~l~~~-~~~~~--~~ 192 (480)
T 2vch_A 161 EFRELTEPL---------------------------------------------MLPGCVPVAGKDFLDP-AQDRK--DD 192 (480)
T ss_dssp CGGGCSSCB---------------------------------------------CCTTCCCBCGGGSCGG-GSCTT--SH
T ss_pred cccccCCcc---------------------------------------------cCCCCCCCChHHCchh-hhcCC--ch
Confidence 0000 0011 2233333333344422 11111 12
Q ss_pred HHHHHHHHHHhhccccEEEEcCccccccccc-------ccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCC
Q 010617 237 FFDLLERNTRAMIAVNFHFCNSTYELESEAF-------TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPS 309 (506)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~-------~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (506)
..+.+.+..+.+++++.+++|++.+||.... +..+++++|||++....... ..+.+.++.+|++.++++
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~ 268 (480)
T 2vch_A 193 AYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLG 268 (480)
T ss_dssp HHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC---------CHHHHHHHTSCTT
T ss_pred HHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEecccccccccc----CccchhHHHHHhcCCCCC
Confidence 3344445555667888999999999987432 11478999999986542110 023567899999998888
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-----------CC-CCCCChhhHHhhcCCeEEEe-ccc
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITT-----------DA-NDRYPEGFQERVAARGQMIS-WAP 376 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-----------~~-~~~lp~~~~~~~~~n~~v~~-~vp 376 (506)
++|||||||....+.+++..++++|+.++++|||+++..... .. .+.+|+++.++..++++++. |+|
T Consensus 269 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~P 348 (480)
T 2vch_A 269 SVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAP 348 (480)
T ss_dssp CEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCC
T ss_pred ceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccC
Confidence 999999999988889999999999999999999999864210 01 13589999888888888775 999
Q ss_pred hhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhh-hccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 377 QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI-CDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 377 q~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv-~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
|.+||+|++|++||||||+||++||+++|||||++|+++||+.||+++ ++ +|+|+.++..+++.+++++|+++|+++|
T Consensus 349 q~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl 427 (480)
T 2vch_A 349 QAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLM 427 (480)
T ss_dssp HHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999997 57 6999999763334799999999999999
Q ss_pred C---ChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHh
Q 010617 456 G---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 494 (506)
Q Consensus 456 ~---d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 494 (506)
. +++||++|+++++++++++.+||++..++++|++++..
T Consensus 428 ~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 428 EGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 8 67999999999999999999999999999999999976
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-60 Score=496.57 Aligned_cols=434 Identities=27% Similarity=0.477 Sum_probs=324.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CccCHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFR--VTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLG 79 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~ 79 (506)
++||+++|+|++||++|+++||++|++|||. ||+++++.+.+.+.+.... ....+++|+.++++++... ......
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCChH
Confidence 5799999999999999999999999999755 5778886544443322100 0124899999998776542 112233
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccC-CCCC
Q 010617 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD-GIID 158 (506)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~-~~~~ 158 (506)
..+..+...+...++++++++....+.+|||||+|.+..|+..+|+++|||++.++++++..+....+.+.+... +..+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 334444444445555666544321126899999999989999999999999999999988777655443322111 1000
Q ss_pred CCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHHHH
Q 010617 159 SHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFF 238 (506)
Q Consensus 159 ~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (506)
.. .........+|+++.+...+++. ..........+.
T Consensus 165 ~~------------------------------------------~~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~ 201 (456)
T 2c1x_A 165 IQ------------------------------------------GREDELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFS 201 (456)
T ss_dssp CT------------------------------------------TCTTCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHH
T ss_pred cc------------------------------------------cccccccccCCCCCcccHHhCch-hhcCCCcccHHH
Confidence 00 00001111245554444555552 221122223344
Q ss_pred HHHHHHHHhhccccEEEEcCcccccccc----cccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCCceEEE
Q 010617 239 DLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYV 314 (506)
Q Consensus 239 ~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~v 314 (506)
+.+.+..+...+++.+++||+++||++. ++..|++++|||++...... .++.+.++.+|++..+++++|||
T Consensus 202 ~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~v 276 (456)
T 2c1x_A 202 RMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYI 276 (456)
T ss_dssp HHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCHHHHC--------------CHHHHHHTSCTTCEEEE
T ss_pred HHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEE
Confidence 5555555566789999999999999973 44468999999998653311 13445679999999888899999
Q ss_pred EeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccC
Q 010617 315 SFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCG 394 (506)
Q Consensus 315 s~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG 394 (506)
||||......+++..++++|+..+++|||+++.. ..+.+|+++.++.++|+++++|+||.++|+|+++++||||||
T Consensus 277 s~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G 352 (456)
T 2c1x_A 277 SFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCG 352 (456)
T ss_dssp ECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCC
T ss_pred ecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCC
Confidence 9999987788999999999999999999999765 234688888888899999999999999999999999999999
Q ss_pred chhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCCh---HHHHHHHHHHHHH
Q 010617 395 WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKA 471 (506)
Q Consensus 395 ~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~---~~r~~a~~l~~~~ 471 (506)
+||++||+++|||+|++|++.||+.||+++++.||+|+.++. +.+++++|+++|+++|.|+ +||++|+++++++
T Consensus 353 ~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~ 429 (456)
T 2c1x_A 353 WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETA 429 (456)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999984599999975 6789999999999999987 8999999999999
Q ss_pred HhhhhcCCChHHHHHHHHHHHH
Q 010617 472 MSSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 472 ~~~~~~gg~~~~~~~~~~~~~~ 493 (506)
++++.+||++.+++++|++++.
T Consensus 430 ~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 430 DRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp HHHTSTTCHHHHHHHHHHHHHT
T ss_pred HHhhhcCCcHHHHHHHHHHHHH
Confidence 9999999999999999999884
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1e-57 Score=477.63 Aligned_cols=430 Identities=25% Similarity=0.422 Sum_probs=327.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcch-----hHHHHhhhcCCCCCCCeEEEecCCCCCCC-CC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH-----KRVVESLQGKNYLGEQIHLVSIPDGMEPW-ED 74 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~i~~~~~~~~~~~~-~~ 74 (506)
++||+++|+|++||++|+++||++|++| ||+|||++++.+. ..+.+.. ....+++|+.+|++..+. +.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCcccc
Confidence 5799999999999999999999999999 9999999998753 2232211 122589999999763222 11
Q ss_pred ccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccC
Q 010617 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (506)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 154 (506)
..+....+......+.+.++++++++. +.+|||||+|.+..|+..+|+++|||++.++++++..+..+.+++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~---~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTIL---SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHC---CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhcc---CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 122211133334566778888888772 26899999999989999999999999999999999888777766544211
Q ss_pred CCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCC-CCCCcccccccccCCCch
Q 010617 155 GIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKM-PEMNSRDCFWAHIGDWTS 233 (506)
Q Consensus 155 ~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 233 (506)
+.. ..+.. ......+|++ +.+...+++..+. .+
T Consensus 162 ~~~-----~~~~~--------------------------------------~~~~~~~pg~~~~~~~~~l~~~~~-~~-- 195 (463)
T 2acv_A 162 EVF-----DDSDR--------------------------------------DHQLLNIPGISNQVPSNVLPDACF-NK-- 195 (463)
T ss_dssp CCC-----CCSSG--------------------------------------GGCEECCTTCSSCEEGGGSCHHHH-CT--
T ss_pred CCC-----CCccc--------------------------------------cCceeECCCCCCCCChHHCchhhc-CC--
Confidence 000 00000 0001134554 4444444442211 11
Q ss_pred hHHHHHHHHHHHHhhccccEEEEcCccccccccccc-------CCceeeecccccCCCCCCCCCCCccccchhhhhhhcC
Q 010617 234 QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-------FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQ 306 (506)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~-------~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (506)
. ...+.+.+..+..++++.+++||+++||++...+ .+++++|||++....... ....++.+.++.+|++.+
T Consensus 196 ~-~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~-~~~~~~~~~~~~~wl~~~ 273 (463)
T 2acv_A 196 D-GGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPN-PKLDQAQHDLILKWLDEQ 273 (463)
T ss_dssp T-THHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCB-TTBCHHHHHHHHHHHHTS
T ss_pred c-hHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccc-cccccccchhHHHHHhcC
Confidence 1 1344444555667788999999999999864322 578999999986542010 000124557899999998
Q ss_pred CCCceEEEEeCccc-cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeEEEeccchhhhhcC
Q 010617 307 QPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQLRVLNH 383 (506)
Q Consensus 307 ~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~~vpq~~lL~h 383 (506)
+++++|||||||.. ..+.+++..++.+|+..+++|||+++.+ .+.+|+++.++. ++|+++++|+||.++|+|
T Consensus 274 ~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h 348 (463)
T 2acv_A 274 PDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAH 348 (463)
T ss_dssp CTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHS
T ss_pred CCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCC
Confidence 88999999999998 7888999999999999999999999753 124788888887 899999999999999999
Q ss_pred CCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhh-hccceeeeEe-ecCCCC--CcCHHHHHHHHHHHhC-Ch
Q 010617 384 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI-CDFWKVGLKF-DRDEGG--IITREEIKNKVDQVLG-NQ 458 (506)
Q Consensus 384 ~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv-~~~lG~G~~l-~~~~~~--~~~~~~l~~ai~~vl~-d~ 458 (506)
+++++||||||+||++||+++|||+|++|++.||+.||+++ ++ +|+|+.+ +..+.+ .+++++|.++|+++|+ ++
T Consensus 349 ~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~ 427 (463)
T 2acv_A 349 KAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS 427 (463)
T ss_dssp TTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC
T ss_pred CccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccH
Confidence 99999999999999999999999999999999999999995 67 6999999 321124 6899999999999997 47
Q ss_pred HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHH
Q 010617 459 DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 493 (506)
+||++|+++++++++++.+||++.+++++|++++.
T Consensus 428 ~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 428 IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.1e-44 Score=369.06 Aligned_cols=396 Identities=19% Similarity=0.211 Sum_probs=275.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCC-C----c
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-D----R 75 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~ 75 (506)
|+.+||+|+++++.||++|+++||++|+++||+|++++++.+.+.+.+. +++|+.++...+... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 5568999999999999999999999999999999999999888877776 789999886544321 1 2
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccCC
Q 010617 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (506)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (506)
.+....+..+.+.....+.++.+.++. .+||+||+|.+..|+..+|+.+|||++.+++.+....... ..+.....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccccc
Confidence 233444444444444455566666554 8999999999888999999999999999887653110000 000000000
Q ss_pred CCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhH
Q 010617 156 IIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 235 (506)
Q Consensus 156 ~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (506)
..+ . +. ..+.|. +........ . ..+ ...
T Consensus 157 ~~~-~--~~---~~~~~~---------------------------~~~~~~~~~-------~----~~~--------~~~ 184 (424)
T 2iya_A 157 TAD-R--GE---EAAAPA---------------------------GTGDAEEGA-------E----AED--------GLV 184 (424)
T ss_dssp CC-----------------------------------------------------------------HH--------HHH
T ss_pred ccc-c--cc---cccccc---------------------------ccccchhhh-------c----cch--------hHH
Confidence 000 0 00 000000 000000000 0 000 000
Q ss_pred HHHHHHHHHH----------HhhccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhc
Q 010617 236 IFFDLLERNT----------RAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQ 305 (506)
Q Consensus 236 ~~~~~~~~~~----------~~~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (506)
.+.+.+.+.. .....++.+++++++.|+++..++++++++|||+..... +..+|++.
T Consensus 185 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~ 251 (424)
T 2iya_A 185 RFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPTYGDRS-------------HQGTWEGP 251 (424)
T ss_dssp HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGCCTTEEECCCCCCCCG-------------GGCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCCCCCEEEeCCCCCCcc-------------cCCCCCcc
Confidence 0111111111 111256789999999999876667889999999764221 01256665
Q ss_pred CCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCC
Q 010617 306 QQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPS 385 (506)
Q Consensus 306 ~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~ 385 (506)
.+++++|||++||......+.+..++++++..+.+++|.++.... . +.+ +..++|+++.+|+||.++|+|++
T Consensus 252 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~---~----~~~-~~~~~~v~~~~~~~~~~~l~~~d 323 (424)
T 2iya_A 252 GDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD---P----ADL-GEVPPNVEVHQWVPQLDILTKAS 323 (424)
T ss_dssp CSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC---G----GGG-CSCCTTEEEESSCCHHHHHTTCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC---h----HHh-ccCCCCeEEecCCCHHHHHhhCC
Confidence 556789999999987666788999999999889999988865411 0 111 12467899999999999998887
Q ss_pred cceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHHH
Q 010617 386 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 465 (506)
Q Consensus 386 v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~ 465 (506)
+ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+.++. +.+++++|.++|.++++|+++|++++
T Consensus 324 ~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~ 397 (424)
T 2iya_A 324 A--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLA 397 (424)
T ss_dssp E--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred E--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 7 99999999999999999999999999999999999998 599999975 56899999999999999999999999
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHH
Q 010617 466 ELKEKAMSSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 466 ~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 493 (506)
++++++++. + ..+.+.+.++.+.
T Consensus 398 ~~~~~~~~~---~--~~~~~~~~i~~~~ 420 (424)
T 2iya_A 398 AVRQEIREA---G--GARAAADILEGIL 420 (424)
T ss_dssp HHHHHHHTS---C--HHHHHHHHHHHHH
T ss_pred HHHHHHHhc---C--cHHHHHHHHHHHH
Confidence 999999872 3 3444555555554
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.4e-42 Score=354.71 Aligned_cols=354 Identities=14% Similarity=0.171 Sum_probs=232.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC---------
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--------- 72 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~--------- 72 (506)
++|||||+++|+.||++|+++||++|++|||+|||++++.+.... +. ++.+..+.......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~---------g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EA---------GLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TT---------TCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hc---------CCeeEecCCchhHhhhccccccc
Confidence 368999999999999999999999999999999999998877644 32 67777765332211
Q ss_pred --C----CccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHh
Q 010617 73 --E----DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF 146 (506)
Q Consensus 73 --~----~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 146 (506)
. .......+...+.......+.++++.++. .+||+||+|.+..++..+|+.+|||++.+...+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 0 01111112222223334445555555555 89999999999999999999999999986544321100000
Q ss_pred hccccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCccccccc
Q 010617 147 RIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWA 226 (506)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 226 (506)
.
T Consensus 168 ~------------------------------------------------------------------------------- 168 (400)
T 4amg_A 168 A------------------------------------------------------------------------------- 168 (400)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCCchhHHHHHHHHHHHHh-----hccccEEEEcCccccc--ccccccCCceeeecccccCCCCCCCCCCCccccchh
Q 010617 227 HIGDWTSQKIFFDLLERNTRA-----MIAVNFHFCNSTYELE--SEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNC 299 (506)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~ns~~~le--~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l 299 (506)
...+.+.+..+. .......+....+.+. .+.....+..+.+.+.... ....+
T Consensus 169 ---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 227 (400)
T 4amg_A 169 ---------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPYN------------GGAVL 227 (400)
T ss_dssp ---------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCCC------------CCEEC
T ss_pred ---------HHHHHHHHHHHHhCCCcccccchhhcccCchhhccCcccccCCcccCccccccc------------ccccC
Confidence 000000000000 0111122222221111 1101112222322222211 12223
Q ss_pred hhhhhcCCCCceEEEEeCccccCC--HHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccch
Q 010617 300 LKWLDQQQPSSVVYVSFGSFTILD--QVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQ 377 (506)
Q Consensus 300 ~~~l~~~~~~~vV~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq 377 (506)
.+|++..+++++||||+||..... .+.+..+++++++.+.+++|..+... .+.. ...++|+++.+|+||
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~----~~~~-----~~~~~~v~~~~~~p~ 298 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD----LALL-----GELPANVRVVEWIPL 298 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC----CCCC-----CCCCTTEEEECCCCH
T ss_pred cccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc----cccc-----ccCCCCEEEEeecCH
Confidence 468888888999999999985433 36688899999999999999987652 1111 123678889999999
Q ss_pred hhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 378 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 378 ~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
.++|.|+++ ||||||+||++||+++|||+|++|++.||+.||+++++ +|+|+.++. .++++ ++|+++|+|
T Consensus 299 ~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d 368 (400)
T 4amg_A 299 GALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEA---GSLGA----EQCRRLLDD 368 (400)
T ss_dssp HHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCT---TTCSH----HHHHHHHHC
T ss_pred HHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCC---CCchH----HHHHHHHcC
Confidence 999988776 99999999999999999999999999999999999999 599999975 45555 467788999
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 010617 458 QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 492 (506)
Q Consensus 458 ~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 492 (506)
++||++|+++++++++. .| ..++.+.++.+
T Consensus 369 ~~~r~~a~~l~~~~~~~---~~--~~~~a~~le~l 398 (400)
T 4amg_A 369 AGLREAALRVRQEMSEM---PP--PAETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHHHHHHHHTS---CC--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC---CC--HHHHHHHHHHh
Confidence 99999999999999973 43 34444555543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.5e-42 Score=352.65 Aligned_cols=383 Identities=15% Similarity=0.166 Sum_probs=259.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC-CC-ccCHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-ED-RNDLGKL 81 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~~~~~~ 81 (506)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+.+. +++|+.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 5899999999999999999999999999999999998877767664 78888887543211 00 1111111
Q ss_pred HHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecC-Ccch--HHHHHHHcCCceEEEccchHHHHHHHhhccccccCCCCC
Q 010617 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (506)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (506)
+..+ +.....++++.+... +.+||+||+|. +..| +..+|+.+|||++.+++.+...
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~----------------- 130 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV----------------- 130 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------------
T ss_pred HHHH---HHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------------
Confidence 1111 112223333333311 17899999998 5668 8999999999999988765321
Q ss_pred CCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHHHH
Q 010617 159 SHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFF 238 (506)
Q Consensus 159 ~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (506)
+..|+|...++ + .+++ ......+..... .....+.+.
T Consensus 131 --------~~~~~p~~~~~----------------------------~----~~~~--~~~~n~~~~~~~-~~~~~~~~~ 167 (415)
T 1iir_A 131 --------PSPYYPPPPLG----------------------------E----PSTQ--DTIDIPAQWERN-NQSAYQRYG 167 (415)
T ss_dssp --------CCSSSCCCC-------------------------------------------CHHHHHHHHH-HHHHHHHHH
T ss_pred --------CCcccCCccCC----------------------------c----cccc--hHHHHHHHHHHH-HHHHHHHhH
Confidence 11233332210 0 0000 000000000000 000000000
Q ss_pred HHHHHHH------------HhhccccEEEEcCcccccc-cccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhc
Q 010617 239 DLLERNT------------RAMIAVNFHFCNSTYELES-EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQ 305 (506)
Q Consensus 239 ~~~~~~~------------~~~~~~~~~l~ns~~~le~-~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (506)
..+.+.. +..... .+++|+++.|++ + .+.. ++++|||+..... ++.+.++.+|++.
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~ 236 (415)
T 1iir_A 168 GLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-PTDL-DAVQTGAWILPDE--------RPLSPELAAFLDA 236 (415)
T ss_dssp HHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-CCSS-CCEECCCCCCCCC--------CCCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-cccC-CeEeeCCCccCcc--------cCCCHHHHHHHhh
Confidence 0000000 011123 689999999988 5 3333 8999999986532 2356778899986
Q ss_pred CCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCC
Q 010617 306 QQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPS 385 (506)
Q Consensus 306 ~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~ 385 (506)
. +++|||++||.. ...+.++.+++++++.+.+++|+++... .. . +..++|+++.+|+||.++|.+
T Consensus 237 ~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~~l~~-- 301 (415)
T 1iir_A 237 G--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWAD----LV-L-----PDDGADCFAIGEVNHQVLFGR-- 301 (415)
T ss_dssp S--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTT----CC-C-----SSCGGGEEECSSCCHHHHGGG--
T ss_pred C--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCc----cc-c-----cCCCCCEEEeCcCChHHHHhh--
Confidence 5 469999999986 5678888999999999999999886541 11 1 123567889999999999955
Q ss_pred cceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHHH
Q 010617 386 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 465 (506)
Q Consensus 386 v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~ 465 (506)
+++||||||+||++||+++|||+|++|...||..||+++++ +|+|+.++. +.++.++|.++|.++ .|++|+++++
T Consensus 302 ~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~ 376 (415)
T 1iir_A 302 VAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARAT 376 (415)
T ss_dssp SSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHH
T ss_pred CCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHH
Confidence 45599999999999999999999999999999999999998 599999875 568999999999999 9999999999
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 466 ELKEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 466 ~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
+++++++. ....+.+.++++++.++
T Consensus 377 ~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 377 AVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99998864 23456666677766654
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.5e-41 Score=345.60 Aligned_cols=383 Identities=14% Similarity=0.077 Sum_probs=259.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC-C--CccCHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-E--DRNDLGK 80 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~-~--~~~~~~~ 80 (506)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+.+. |++|+.++...... . .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 5899999999999999999999999999999999998877777765 78888887542111 0 0111111
Q ss_pred HHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecC-Ccch--HHHHHHHcCCceEEEccchHHHHHHHhhccccccCCCC
Q 010617 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (506)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (506)
.+..+.. .....+++.+... ..+||+||+|. +.++ +..+|+.+|||++.+.+.+...
T Consensus 72 ~~~~~~~---~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~---------------- 131 (416)
T 1rrv_A 72 EEQRLAA---MTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL---------------- 131 (416)
T ss_dssp HHHHHHH---HHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS----------------
T ss_pred HHHHHHH---HHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC----------------
Confidence 1111111 1223334443311 17899999997 4557 8999999999999987664321
Q ss_pred CCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHHH
Q 010617 158 DSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF 237 (506)
Q Consensus 158 ~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (506)
+.+|+| ..+ + +.+ .++. ... .+.+... .....+.+
T Consensus 132 ---------~~~~~p-~~~------------------------~----~~~---~~~r--~~n-~~~~~~~-~~~~~~~~ 166 (416)
T 1rrv_A 132 ---------ASPHLP-PAY------------------------D----EPT---TPGV--TDI-RVLWEER-AARFADRY 166 (416)
T ss_dssp ---------CCSSSC-CCB------------------------C----SCC---CTTC--CCH-HHHHHHH-HHHHHHHH
T ss_pred ---------CCcccC-CCC------------------------C----CCC---CchH--HHH-HHHHHHH-HHHHHHHh
Confidence 011222 000 0 000 0000 000 0000000 00000000
Q ss_pred HHHHHHHH------------HhhccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhc
Q 010617 238 FDLLERNT------------RAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQ 305 (506)
Q Consensus 238 ~~~~~~~~------------~~~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (506)
.....+.. +..... .+++|++++|+++ .+.. ++++|||+..... ++.+.++.+|++.
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~ 235 (416)
T 1rrv_A 167 GPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-QPDV-DAVQTGAWLLSDE--------RPLPPELEAFLAA 235 (416)
T ss_dssp HHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-CSSC-CCEECCCCCCCCC--------CCCCHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-CCCC-CeeeECCCccCcc--------CCCCHHHHHHHhc
Confidence 00000100 111233 7999999999886 3333 8999999987532 2356778899976
Q ss_pred CCCCceEEEEeCcccc-CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCC
Q 010617 306 QQPSSVVYVSFGSFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHP 384 (506)
Q Consensus 306 ~~~~~vV~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~ 384 (506)
. +++|||++||... ...+.+..++++++..+.+++|+++... .. . +..++|+++.+|+||.++|+++
T Consensus 236 ~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~ll~~~ 303 (416)
T 1rrv_A 236 G--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTE----LV-L-----PDDRDDCFAIDEVNFQALFRRV 303 (416)
T ss_dssp S--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTT----CC-C-----SCCCTTEEEESSCCHHHHGGGS
T ss_pred C--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcc----cc-c-----cCCCCCEEEeccCChHHHhccC
Confidence 5 4699999999853 4567788899999999999999987551 11 1 1246788899999999999555
Q ss_pred CcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHH
Q 010617 385 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 464 (506)
Q Consensus 385 ~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a 464 (506)
++ ||||||+||++||+++|||+|++|...||..||+++++ +|+|+.++. ..++.++|.++|+++ .|++||+++
T Consensus 304 d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~ 376 (416)
T 1rrv_A 304 AA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARA 376 (416)
T ss_dssp SE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHH
T ss_pred CE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHH
Confidence 55 99999999999999999999999999999999999999 599999875 568999999999999 999999999
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHH-HHHHhcc
Q 010617 465 LELKEKAMSSVREGGSSYKTFQNFL-QWVKTNA 496 (506)
Q Consensus 465 ~~l~~~~~~~~~~gg~~~~~~~~~~-~~~~~~~ 496 (506)
+++++++++ .+. . .+.+.+ +++.++.
T Consensus 377 ~~~~~~~~~----~~~-~-~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 377 EAVAGMVLT----DGA-A-AAADLVLAAVGREK 403 (416)
T ss_dssp HHHTTTCCC----CHH-H-HHHHHHHHHHHC--
T ss_pred HHHHHHHhh----cCc-H-HHHHHHHHHHhccC
Confidence 999998875 222 2 445555 6665543
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2e-38 Score=325.47 Aligned_cols=377 Identities=15% Similarity=0.167 Sum_probs=266.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC-----CCc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-----EDR 75 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~ 75 (506)
|+.+||+|++.++.||++|++.||++|.++||+|++++++.+.+.+.+. ++.+..++...+.. ...
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 6656999999999999999999999999999999999998877777665 78998887533222 112
Q ss_pred cCHHHHHHH-HHHhCcHHHHHHHHHHhcCCCCCccEEEec-CCcchHHHHHHHcCCceEEEccchHHHHHHHhhcccccc
Q 010617 76 NDLGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (506)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 153 (506)
.+....+.. +.......+..+.+.++. .+||+||+| .+..++..+|+.+|||++.+.+.......
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~---------- 139 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH---------- 139 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT----------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc----------
Confidence 233333333 344444455666666665 899999999 77779999999999999997644221000
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCch
Q 010617 154 DGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTS 233 (506)
Q Consensus 154 ~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 233 (506)
+............. .+ . .
T Consensus 140 ------------------------------------------------~~~~~~~~~~~~~~-------~~-~------~ 157 (402)
T 3ia7_A 140 ------------------------------------------------YSLFKELWKSNGQR-------HP-A------D 157 (402)
T ss_dssp ------------------------------------------------BCHHHHHHHHHTCC-------CG-G------G
T ss_pred ------------------------------------------------cccccccccccccc-------Ch-h------h
Confidence 00000000000000 00 0 0
Q ss_pred hHHHHHHHHHHH----------Hhhcc-ccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhh
Q 010617 234 QKIFFDLLERNT----------RAMIA-VNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKW 302 (506)
Q Consensus 234 ~~~~~~~~~~~~----------~~~~~-~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~ 302 (506)
...+.+.+.+.. ..... .+..++...++++.+...+..++.+|||........ ..|
T Consensus 158 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~ 224 (402)
T 3ia7_A 158 VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTGRDGQ-------------PGW 224 (402)
T ss_dssp SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCCCCC-----------------CCC
T ss_pred HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCCeEEeCCCCCCcccC-------------CCC
Confidence 000011111100 01112 277888888888887555677899999987543211 134
Q ss_pred hhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhc
Q 010617 303 LDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLN 382 (506)
Q Consensus 303 l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~ 382 (506)
....+++++||+++||......+.+..+++++++.+.++++.++.... .+. .+..++|+.+.+|+|+.++|+
T Consensus 225 ~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------~~~-~~~~~~~v~~~~~~~~~~ll~ 296 (402)
T 3ia7_A 225 QPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD-------PAV-LGPLPPNVEAHQWIPFHSVLA 296 (402)
T ss_dssp CCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC-------GGG-GCSCCTTEEEESCCCHHHHHT
T ss_pred cccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC-------hhh-hCCCCCcEEEecCCCHHHHHh
Confidence 444556789999999997777788999999999999888888865411 111 112467899999999999997
Q ss_pred CCCcceEEeccCchhHHHHHHcCCcEEeccC-cccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHH
Q 010617 383 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPY-FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 461 (506)
Q Consensus 383 h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~-~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r 461 (506)
++++ ||||||.||++||+++|+|+|++|. ..||..||.++++ .|+|..+.. +.+++++|.++|.+++.|++++
T Consensus 297 ~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~ 370 (402)
T 3ia7_A 297 HARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVR 370 (402)
T ss_dssp TEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHH
T ss_pred hCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHH
Confidence 7666 9999999999999999999999999 9999999999999 499999986 5689999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHH
Q 010617 462 ARALELKEKAMSSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 462 ~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 493 (506)
++++++++++.+ .+ +.+.+.+.++.+.
T Consensus 371 ~~~~~~~~~~~~----~~-~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 371 ERVRRMQRDILS----SG-GPARAADEVEAYL 397 (402)
T ss_dssp HHHHHHHHHHHT----SC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh----CC-hHHHHHHHHHHHH
Confidence 999999999876 33 3444444444443
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.9e-38 Score=327.56 Aligned_cols=379 Identities=16% Similarity=0.175 Sum_probs=267.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----ccC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----RND 77 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~ 77 (506)
.+||+|++.++.||++|+++||++|.++||+|++++++.+.+.+.+. ++.+..++...+.... ..+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 47999999999999999999999999999999999998888888765 7999998864443211 011
Q ss_pred HHHHHHH-HHHhCcHHHHHHHHHHhcCCCCCccEEEec-CCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccCC
Q 010617 78 LGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (506)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (506)
....+.. +.......+.++.+.++. ++||+||+| ....++..+|+.+|||++.+.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------------- 154 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------------- 154 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-------------
Confidence 1111222 333344455666666665 899999999 7777899999999999999764422100
Q ss_pred CCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhH
Q 010617 156 IIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 235 (506)
Q Consensus 156 ~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (506)
++............. .+ .. .....+
T Consensus 155 ---------------------------------------------~~~~~~~~~~~~~~~-------~p-~~--~~~~~~ 179 (415)
T 3rsc_A 155 ---------------------------------------------HYSFSQDMVTLAGTI-------DP-LD--LPVFRD 179 (415)
T ss_dssp ---------------------------------------------SCCHHHHHHHHHTCC-------CG-GG--CHHHHH
T ss_pred ---------------------------------------------ccccccccccccccC-------Ch-hh--HHHHHH
Confidence 000000000000000 00 00 000000
Q ss_pred HHHHHHHHH------HHhhc-cccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCC
Q 010617 236 IFFDLLERN------TRAMI-AVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQP 308 (506)
Q Consensus 236 ~~~~~~~~~------~~~~~-~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (506)
.+.++..+. ..... ..+..++...+.++++...++.++.++||....... ..+|....++
T Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~ 246 (415)
T 3rsc_A 180 TLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRF-------------LGEWTRPADD 246 (415)
T ss_dssp HHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCGG-------------GCCCCCCSSC
T ss_pred HHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCccc-------------CcCccccCCC
Confidence 111111000 01111 237889999999988755667789999998754321 1244544556
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
+++||+++||......+.+..+++++++.+.+++|.++.... .+. .+..++|+++.+|+|+.++|.++++
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~-------~~~-l~~~~~~v~~~~~~~~~~ll~~ad~-- 316 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVD-------PAA-LGDLPPNVEAHRWVPHVKVLEQATV-- 316 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSC-------GGG-GCCCCTTEEEESCCCHHHHHHHEEE--
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCC-------hHH-hcCCCCcEEEEecCCHHHHHhhCCE--
Confidence 789999999987767788999999999999999988865411 111 1124678999999999999988666
Q ss_pred EEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHHHHHH
Q 010617 389 FLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELK 468 (506)
Q Consensus 389 ~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~~l~ 468 (506)
||||||.||++||+++|+|+|++|...||..||.++++ .|+|..+.. +.+++++|.++|.+++.|+++++++++++
T Consensus 317 ~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 392 (415)
T 3rsc_A 317 CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMR 392 (415)
T ss_dssp EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 599999976 56899999999999999999999999999
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHH
Q 010617 469 EKAMSSVREGGSSYKTFQNFLQWVK 493 (506)
Q Consensus 469 ~~~~~~~~~gg~~~~~~~~~~~~~~ 493 (506)
+++.+ .+ +.+.+.+.++.+.
T Consensus 393 ~~~~~----~~-~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 393 GHVRR----AG-GAARAADAVEAYL 412 (415)
T ss_dssp HHHHH----SC-HHHHHHHHHHHHH
T ss_pred HHHHh----cC-HHHHHHHHHHHHh
Confidence 99987 33 3444444444443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3e-39 Score=332.74 Aligned_cols=367 Identities=15% Similarity=0.106 Sum_probs=257.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC--CCccCHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--EDRNDLGKL 81 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~ 81 (506)
|||+|++.++.||++|+++||++|.+|||+|++++++...+.+++. ++.|..++...... ........+
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 6899999999999999999999999999999999998888888776 78888887433211 000001111
Q ss_pred HHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchH---HHHHHHcCCceEEEccchHHHHHHHhhccccccCCCCC
Q 010617 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS---MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (506)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (506)
...+.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+.+++...... +
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~--~----------- 133 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE--Q----------- 133 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--S-----------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--h-----------
Confidence 1111222223333333332 369999999665543 789999999999977665421000 0
Q ss_pred CCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHHHH
Q 010617 159 SHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFF 238 (506)
Q Consensus 159 ~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (506)
+ ...|... .....+.+.
T Consensus 134 -------------------------------------------~-------------------~~~~~~~-~~~~~~~~~ 150 (404)
T 3h4t_A 134 -------------------------------------------S-------------------QAERDMY-NQGADRLFG 150 (404)
T ss_dssp -------------------------------------------C-------------------HHHHHHH-HHHHHHHHH
T ss_pred -------------------------------------------H-------------------HHHHHHH-HHHHHHHhH
Confidence 0 0000000 000000000
Q ss_pred HHHHHHHHh-----------hccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCC
Q 010617 239 DLLERNTRA-----------MIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQ 307 (506)
Q Consensus 239 ~~~~~~~~~-----------~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (506)
+...+.... ....+..+.+..+.+.+. .++++++.++|++..+.. .+.++++.+|++..
T Consensus 151 ~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-~~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~- 220 (404)
T 3h4t_A 151 DAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-RPTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG- 220 (404)
T ss_dssp HHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-CTTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS-
T ss_pred HHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-CCCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC-
Confidence 000000000 001233566888888766 567789999998875432 24567788999853
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcc
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 387 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~ 387 (506)
+++|||++||... ..+.+..+++++++.+.++||+.+... .+.+ ..++|+++.+|+||.++|.++++
T Consensus 221 -~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~----~~~~------~~~~~v~~~~~~~~~~ll~~~d~- 287 (404)
T 3h4t_A 221 -SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG----LGRI------DEGDDCLVVGEVNHQVLFGRVAA- 287 (404)
T ss_dssp -SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT----CCCS------SCCTTEEEESSCCHHHHGGGSSE-
T ss_pred -CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc----cccc------cCCCCEEEecCCCHHHHHhhCcE-
Confidence 5699999999876 678899999999999999999987541 1111 12678999999999999976555
Q ss_pred eEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHHHHH
Q 010617 388 CFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALEL 467 (506)
Q Consensus 388 ~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~~l 467 (506)
||||||.||++||+++|||+|++|+..||+.||+++++ .|+|..+.. ..++.++|.++|.++++ ++|+++++++
T Consensus 288 -~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~ 361 (404)
T 3h4t_A 288 -VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAV 361 (404)
T ss_dssp -EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHH
T ss_pred -EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 99999999999999999999999999999999999999 599999976 66899999999999998 9999999999
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 468 KEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 468 ~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
++++++ ...+.+.+.++++.+.
T Consensus 362 ~~~~~~------~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 362 AGTIRT------DGTTVAAKLLLEAISR 383 (404)
T ss_dssp HTTCCC------CHHHHHHHHHHHHHHC
T ss_pred HHHHhh------hHHHHHHHHHHHHHhh
Confidence 988753 3456666666666543
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.6e-37 Score=319.53 Aligned_cols=365 Identities=17% Similarity=0.182 Sum_probs=252.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----cc
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----RN 76 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~ 76 (506)
+.+||+|++.++.||++|+++|+++|+++||+|++++++...+.+.+. ++.++.++...+.... ..
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCCSCCTTSCGGGGCS
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCcCccccccccccch
Confidence 346999999999999999999999999999999999998876666553 7889988865432210 12
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhccccccCCC
Q 010617 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (506)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 156 (506)
++...+..+...+...+..+.+.++. .+||+||+|.+..++..+|+.+|||++.+++........ ...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~-------- 144 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEE-------- 144 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHH--------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-ccc--------
Confidence 33333333333344445566666655 899999999877789999999999999977543200000 000
Q ss_pred CCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchhHH
Q 010617 157 IDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKI 236 (506)
Q Consensus 157 ~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 236 (506)
... ..+.+..+.+ ...+ ....
T Consensus 145 ---------------------------------------------~~~--~~~~~~~~~~-----~~~~-------~~~~ 165 (430)
T 2iyf_A 145 ---------------------------------------------VAE--PMWREPRQTE-----RGRA-------YYAR 165 (430)
T ss_dssp ---------------------------------------------THH--HHHHHHHHSH-----HHHH-------HHHH
T ss_pred ---------------------------------------------ccc--chhhhhccch-----HHHH-------HHHH
Confidence 000 0000000000 0000 0000
Q ss_pred HHHHHHH------HHHhhccccEEEEcCcccccccccccCCc-eeeecccccCCCCCCCCCCCccccchhhhhhhcCCCC
Q 010617 237 FFDLLER------NTRAMIAVNFHFCNSTYELESEAFTTFPE-LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPS 309 (506)
Q Consensus 237 ~~~~~~~------~~~~~~~~~~~l~ns~~~le~~~~~~~p~-v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (506)
+.+...+ ..+....++.+++++.+.++++...++++ +++|||....... ..+|.+..+++
T Consensus 166 ~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~~-------------~~~~~~~~~~~ 232 (430)
T 2iyf_A 166 FEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRAE-------------EGGWQRPAGAE 232 (430)
T ss_dssp HHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC------------------CCCCCCCTTCS
T ss_pred HHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCCCCCC-------------CCCCccccCCC
Confidence 0111110 00111256889999999998764556678 9999986542210 01344444557
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
++||+++||......+.+..++++++.. +.+++|.++.... .+.+ +..++|+.+.+|+||.++|+++++
T Consensus 233 ~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~-------~~~l-~~~~~~v~~~~~~~~~~~l~~ad~-- 302 (430)
T 2iyf_A 233 KVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT-------PAEL-GELPDNVEVHDWVPQLAILRQADL-- 302 (430)
T ss_dssp EEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--
T ss_pred CeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC-------hHHh-ccCCCCeEEEecCCHHHHhhccCE--
Confidence 8999999998755678889999999885 7888888764311 1111 124578999999999999988877
Q ss_pred EEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHHHHHH
Q 010617 389 FLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELK 468 (506)
Q Consensus 389 ~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~~l~ 468 (506)
||||||+||++||+++|+|+|++|...||..|+.++++ .|+|..+.. +.++.++|.++|.++++|+++++++.+++
T Consensus 303 ~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 378 (430)
T 2iyf_A 303 FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQ 378 (430)
T ss_dssp EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 599999875 56799999999999999999999999999
Q ss_pred HHHHh
Q 010617 469 EKAMS 473 (506)
Q Consensus 469 ~~~~~ 473 (506)
+++.+
T Consensus 379 ~~~~~ 383 (430)
T 2iyf_A 379 AEMAQ 383 (430)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99886
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=7.9e-37 Score=312.20 Aligned_cols=354 Identities=14% Similarity=0.107 Sum_probs=251.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCC-----------
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW----------- 72 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~----------- 72 (506)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... ++.++.++......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999998776666554 78888877532000
Q ss_pred CCcc--CHHHHH-HH-HHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHhhc
Q 010617 73 EDRN--DLGKLI-EK-CLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRI 148 (506)
Q Consensus 73 ~~~~--~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 148 (506)
.... .....+ .. +...+...+.++.+.++. .+||+||+|.+..++..+|+.+|||++.+...+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~--------- 139 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV--------- 139 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC---------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCc---------
Confidence 0001 111111 21 222233345555555554 7899999998877899999999999998653210
Q ss_pred cccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCccccccccc
Q 010617 149 PKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHI 228 (506)
Q Consensus 149 ~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~ 228 (506)
.. . . +.
T Consensus 140 -----------------------------------------------------~~---------~---~-----~~---- 145 (384)
T 2p6p_A 140 -----------------------------------------------------DA---------D---G-----IH---- 145 (384)
T ss_dssp -----------------------------------------------------CC---------T---T-----TH----
T ss_pred -----------------------------------------------------cc---------c---h-----hh----
Confidence 00 0 0 00
Q ss_pred CCCchhHHHHHHHHHHHHhh-----ccccEEEEcCcccccccccccC-CceeeecccccCCCCCCCCCCCccccchhhhh
Q 010617 229 GDWTSQKIFFDLLERNTRAM-----IAVNFHFCNSTYELESEAFTTF-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKW 302 (506)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~ns~~~le~~~~~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~ 302 (506)
..+.+.+.+..... ..++.+++++.+.++.+ .+++ +++.+++. . .+.++.+|
T Consensus 146 ------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~-~--------------~~~~~~~~ 203 (384)
T 2p6p_A 146 ------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-NAAPARMMRHVAT-S--------------RQCPLEPW 203 (384)
T ss_dssp ------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-TSCCCEECCCCCC-C--------------CCCBCCHH
T ss_pred ------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-CCCCCCceEecCC-C--------------CCCCCCch
Confidence 00011111111111 12678999999999876 3433 23444421 1 01234578
Q ss_pred hhcCCCCceEEEEeCccccC-----CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccch
Q 010617 303 LDQQQPSSVVYVSFGSFTIL-----DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQ 377 (506)
Q Consensus 303 l~~~~~~~vV~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq 377 (506)
++..+++++||+++||.... ..+.+..+++++++.+.+++|+.++. . .+.+ +..++|+.+ +|+||
T Consensus 204 l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~----~~~l-~~~~~~v~~-~~~~~ 273 (384)
T 2p6p_A 204 MYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT----V----AEAL-RAEVPQARV-GWTPL 273 (384)
T ss_dssp HHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH----H----HHHH-HHHCTTSEE-ECCCH
T ss_pred hhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC----C----HHhh-CCCCCceEE-cCCCH
Confidence 87755578999999998654 45778899999999999999987532 0 1111 235789999 99999
Q ss_pred hhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 378 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 378 ~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
.++|+++++ ||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. +.++.++|.++|.+++.|
T Consensus 274 ~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~ 347 (384)
T 2p6p_A 274 DVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAK 347 (384)
T ss_dssp HHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHC
T ss_pred HHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcC
Confidence 999977665 99999999999999999999999999999999999999 599999875 568999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 458 QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 458 ~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
++++++++++++++++ .+ ..+.+.+.++.+..+
T Consensus 348 ~~~~~~~~~~~~~~~~----~~-~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 348 DTYARRAQDLSREISG----MP-LPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHHHHHHHHT----SC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----CC-CHHHHHHHHHHHhhh
Confidence 9999999999999997 22 345555566655543
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.9e-37 Score=322.88 Aligned_cols=375 Identities=12% Similarity=0.118 Sum_probs=247.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCC---------
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE--------- 73 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~--------- 73 (506)
.|||+|++.++.||++|+++||++|.++||+|+|++++...+.+.+. |+.|+.++.......
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhccc
Confidence 47999999999999999999999999999999999998877767664 799998876431000
Q ss_pred -------------Cc-cCHHH---HHHHHHHh----C-cH-HHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCc
Q 010617 74 -------------DR-NDLGK---LIEKCLQV----M-PG-KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVR 130 (506)
Q Consensus 74 -------------~~-~~~~~---~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP 130 (506)
.. ..+.. ....+... . .. .+.++++.+++ .+||+||+|.+..++..+|+.+|||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTCC
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCCC
Confidence 00 01111 11112111 1 13 66777766665 7999999999778999999999999
Q ss_pred eEEEccchHHHHHHHhhccccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCccccee
Q 010617 131 GAVFWPSSAASVALVFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFR 210 (506)
Q Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 210 (506)
++.+...+............ .++|.|..
T Consensus 168 ~v~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------------------------------------ 195 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFLG----------------LLPDQPEE------------------------------------ 195 (441)
T ss_dssp EEEECSSCCHHHHHHHHHHH----------------HGGGSCTT------------------------------------
T ss_pred EEEEecCCCcchhhhhhhhh----------------hccccccc------------------------------------
Confidence 99986543221110000000 00000000
Q ss_pred ecCCCCCCCcccccccccCCCchhHHHHHHHHHHHH-h----hccccEEEEcCcccccccccccCC-ceeeecccccCCC
Q 010617 211 IAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR-A----MIAVNFHFCNSTYELESEAFTTFP-ELLPIGPLLASNR 284 (506)
Q Consensus 211 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~l~ns~~~le~~~~~~~p-~v~~VGpl~~~~~ 284 (506)
. . .....+.+.+...+..- . ....+.++.++.+.++.+ ..++. .+.++++
T Consensus 196 ------~-----~------~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~------ 251 (441)
T 2yjn_A 196 ------H-----R------EDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY------ 251 (441)
T ss_dssp ------T-----C------CCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC------
T ss_pred ------c-----c------cchHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCC-CCCCCCceeeeCC------
Confidence 0 0 00000111111111000 0 012345666666666653 23221 2222211
Q ss_pred CCCCCCCCccccchhhhhhhcCCCCceEEEEeCccccC---CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhh
Q 010617 285 LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL---DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGF 361 (506)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~ 361 (506)
..+.++.+|++..+++++|||++||.... ..+.+..+++++...+.++||+.+.. ..+.+.
T Consensus 252 ---------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~--- 315 (441)
T 2yjn_A 252 ---------NGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA--- 315 (441)
T ss_dssp ---------CSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS---
T ss_pred ---------CCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc---
Confidence 01223457887666678999999998643 33567788999988899999988754 112221
Q ss_pred HHhhcCCeEEEeccchhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCC
Q 010617 362 QERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 441 (506)
Q Consensus 362 ~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~ 441 (506)
..++|+++.+|+||.++|.++++ ||||||.||++||+++|||+|++|...||..||.++++ .|+|+.++. +.
T Consensus 316 --~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~ 387 (441)
T 2yjn_A 316 --NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PE 387 (441)
T ss_dssp --SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TT
T ss_pred --cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---cc
Confidence 23678999999999999966555 99999999999999999999999999999999999999 599999875 56
Q ss_pred cCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHh
Q 010617 442 ITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 494 (506)
Q Consensus 442 ~~~~~l~~ai~~vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 494 (506)
+++++|.++|.++++|++++++++++++++++ .+. .+.+.+.++.+..
T Consensus 388 ~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 388 LTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EPS-PAEVVGICEELAA 435 (441)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCC-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CCC-HHHHHHHHHHHHH
Confidence 89999999999999999999999999999987 233 4555555555543
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.6e-35 Score=302.54 Aligned_cols=341 Identities=12% Similarity=0.111 Sum_probs=225.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCC---------C-
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEP---------W- 72 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~---------~- 72 (506)
+|||+|++.++.||++|++.|+++|.++||+|++++++...+.+... ++.+..++..... .
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 68999999999999999999999999999999999998877777765 6777777531110 0
Q ss_pred --CCccCH----HHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHh
Q 010617 73 --EDRNDL----GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF 146 (506)
Q Consensus 73 --~~~~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 146 (506)
...... ......+.......+.++.+.++. ++||+||+|...+++..+|+.+|||++.+..........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~-- 160 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI-- 160 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH--
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh--
Confidence 000111 111222222233444555555555 899999999877889999999999999865432100000
Q ss_pred hccccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCccccccc
Q 010617 147 RIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWA 226 (506)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 226 (506)
T Consensus 161 -------------------------------------------------------------------------------- 160 (398)
T 4fzr_A 161 -------------------------------------------------------------------------------- 160 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCchhHHHHHHHHHHHHh-----hccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhh
Q 010617 227 HIGDWTSQKIFFDLLERNTRA-----MIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLK 301 (506)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~ 301 (506)
.....+.+.+.... ....+..+....+.++.+.......+.++++.. ...++..
T Consensus 161 -------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ 219 (398)
T 4fzr_A 161 -------KSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYNG--------------RNDQVPS 219 (398)
T ss_dssp -------HHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----CCCEECCCCCCCC--------------SSCCCCH
T ss_pred -------hHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCCCCCCCeeeeCCCC--------------CCCCCch
Confidence 00000001111111 112345566666666544111111122222110 1223346
Q ss_pred hhhcCCCCceEEEEeCccccC--------CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEe
Q 010617 302 WLDQQQPSSVVYVSFGSFTIL--------DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMIS 373 (506)
Q Consensus 302 ~l~~~~~~~vV~vs~GS~~~~--------~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~ 373 (506)
|+...+++++||+++||.... ..+.+..+++++.+.+.+++|+.++.. .+.+ +..++|+++.+
T Consensus 220 ~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~----~~~l-----~~~~~~v~~~~ 290 (398)
T 4fzr_A 220 WVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL----AQTL-----QPLPEGVLAAG 290 (398)
T ss_dssp HHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEEEES
T ss_pred hhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc----hhhh-----ccCCCcEEEeC
Confidence 777666678999999998432 345688899999989999998886541 1111 13468899999
Q ss_pred ccchhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHH
Q 010617 374 WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 453 (506)
Q Consensus 374 ~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~ 453 (506)
|+|+.++|.++++ ||||||.||++||+++|+|+|++|...||..||.++++ .|+|..++. +.+++++|.++|.+
T Consensus 291 ~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ 364 (398)
T 4fzr_A 291 QFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACAR 364 (398)
T ss_dssp CCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHH
T ss_pred cCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHH
Confidence 9999999988776 99999999999999999999999999999999999999 499999976 56789999999999
Q ss_pred HhCChHHHHHHHHHHHHHHh
Q 010617 454 VLGNQDFKARALELKEKAMS 473 (506)
Q Consensus 454 vl~d~~~r~~a~~l~~~~~~ 473 (506)
++.|+++|++++++++++.+
T Consensus 365 ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 365 IRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHCTHHHHHHHHHHHHHTT
T ss_pred HHhCHHHHHHHHHHHHHHHc
Confidence 99999999999999999886
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5e-34 Score=292.98 Aligned_cols=350 Identities=15% Similarity=0.178 Sum_probs=237.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCC------------
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME------------ 70 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~------------ 70 (506)
.|||+|++.++.||++|++.||++|.++||+|+++++ ...+.+... ++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 4899999999999999999999999999999999999 777777664 799998875311
Q ss_pred ----------CCCCccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHH
Q 010617 71 ----------PWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (506)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 140 (506)
+..........+.... ...+.++.+.++. ++||+||+|...+++..+|+.+|||++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVN---RPLVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHH---GGGHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHHH---HHHHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 0111112222222222 2333444444444 89999999988888999999999999986532110
Q ss_pred HHHHHhhccccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCc
Q 010617 141 SVALVFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNS 220 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 220 (506)
. . .....
T Consensus 164 ~--------------------------------------------------------------~--~~~~~--------- 170 (398)
T 3oti_A 164 T--------------------------------------------------------------R--GMHRS--------- 170 (398)
T ss_dssp C--------------------------------------------------------------T--THHHH---------
T ss_pred c--------------------------------------------------------------c--chhhH---------
Confidence 0 0 00000
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHhhccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhh
Q 010617 221 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCL 300 (506)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~ 300 (506)
+. . .+.....+........+..+....+.+..+.......+.++ |. +....+.
T Consensus 171 --~~-~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~ 223 (398)
T 3oti_A 171 --IA-S---------FLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWV-PY--------------GGGAVLG 223 (398)
T ss_dssp --HH-T---------TCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBCCCCC-CC--------------CCCEECC
T ss_pred --HH-H---------HHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCCcccc-CC--------------CCCcCCc
Confidence 00 0 00000000000012334555555555554311110111111 11 0112233
Q ss_pred hhhhcCCCCceEEEEeCccccC--CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchh
Q 010617 301 KWLDQQQPSSVVYVSFGSFTIL--DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL 378 (506)
Q Consensus 301 ~~l~~~~~~~vV~vs~GS~~~~--~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~ 378 (506)
+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+.++.. .+.+ +..++|+.+.+|+|+.
T Consensus 224 ~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--------~~~l-~~~~~~v~~~~~~~~~ 294 (398)
T 3oti_A 224 DRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--------ISPL-GTLPRNVRAVGWTPLH 294 (398)
T ss_dssp SSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--------CGGG-CSCCTTEEEESSCCHH
T ss_pred hhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--------hhhh-ccCCCcEEEEccCCHH
Confidence 5666556678999999998432 556788899999988999999987651 1111 1246789999999999
Q ss_pred hhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhH--HhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhC
Q 010617 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE--RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (506)
Q Consensus 379 ~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na--~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~ 456 (506)
++|+++++ ||||||.||++||+++|+|+|++|...||..|| .++++ .|+|..++. +.++++.|. +++.
T Consensus 295 ~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 295 TLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIG 364 (398)
T ss_dssp HHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHH
T ss_pred HHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHc
Confidence 99988666 999999999999999999999999999999999 99999 599999976 567888777 8889
Q ss_pred ChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 010617 457 NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 492 (506)
Q Consensus 457 d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 492 (506)
|+++|++++++++++.+ .. +.+.+.+.++.+
T Consensus 365 ~~~~~~~~~~~~~~~~~----~~-~~~~~~~~l~~l 395 (398)
T 3oti_A 365 DESLRTAAREVREEMVA----LP-TPAETVRRIVER 395 (398)
T ss_dssp CHHHHHHHHHHHHHHHT----SC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh----CC-CHHHHHHHHHHH
Confidence 99999999999999987 23 345555555554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.5e-33 Score=286.86 Aligned_cols=356 Identities=14% Similarity=0.151 Sum_probs=239.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEec-CCCCCCC---------
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSI-PDGMEPW--------- 72 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~-~~~~~~~--------- 72 (506)
+|||+|++.++.||++|++.|+++|.++||+|++++++...+.+... ++.+..+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 58999999999999999999999999999999999987766666665 6788777 3211000
Q ss_pred -CC---ccCHHHHHHHHHHhCcHH-------HHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHH
Q 010617 73 -ED---RNDLGKLIEKCLQVMPGK-------LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAAS 141 (506)
Q Consensus 73 -~~---~~~~~~~~~~~~~~~~~~-------~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 141 (506)
.. ..........+....... +.++.+.++. ++||+||+|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00 000011111111111122 4445555544 899999999877788899999999999865321100
Q ss_pred HHHHhhccccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcc
Q 010617 142 VALVFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSR 221 (506)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (506)
. .
T Consensus 149 ----------------------------------------------------------------~----------~---- 150 (391)
T 3tsa_A 149 ----------------------------------------------------------------A----------G---- 150 (391)
T ss_dssp ----------------------------------------------------------------T----------T----
T ss_pred ----------------------------------------------------------------c----------c----
Confidence 0 0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHhh-----ccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCcccc
Q 010617 222 DCFWAHIGDWTSQKIFFDLLERNTRAM-----IAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCED 296 (506)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~ 296 (506)
.......+++.+..... ...+.++....++++.........+.++ |.. ..
T Consensus 151 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~--------------~~ 205 (391)
T 3tsa_A 151 ----------PFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYV-PYN--------------GS 205 (391)
T ss_dssp ----------HHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCC-CCC--------------CC
T ss_pred ----------cccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeee-cCC--------------CC
Confidence 00011111222211111 2236677777777765521111122333 111 11
Q ss_pred chhhhhhhcCCCCceEEEEeCcccc--CC-HHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEE
Q 010617 297 SNCLKWLDQQQPSSVVYVSFGSFTI--LD-QVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI 372 (506)
Q Consensus 297 ~~l~~~l~~~~~~~vV~vs~GS~~~--~~-~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~ 372 (506)
..+..|+...+++++|++++||... .. .+.+..++++ ++. +.+++|+.++. ..+.+. ..++|+.+.
T Consensus 206 ~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~ 275 (391)
T 3tsa_A 206 GAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE----HRALLT-----DLPDNARIA 275 (391)
T ss_dssp EECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEEC
T ss_pred cCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEe
Confidence 2233667665667899999999832 23 7778888888 877 77888887654 111121 236789999
Q ss_pred eccchhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHH
Q 010617 373 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 452 (506)
Q Consensus 373 ~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~ 452 (506)
+|+|+.++|.++++ ||||||.||++||+++|+|+|++|...||..|+.++++ .|+|..+..+ ....+++.|.++|.
T Consensus 276 ~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~ 351 (391)
T 3tsa_A 276 ESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIA 351 (391)
T ss_dssp CSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHH
T ss_pred ccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHH
Confidence 99999999966666 99999999999999999999999999999999999999 4999998630 01368999999999
Q ss_pred HHhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 010617 453 QVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 492 (506)
Q Consensus 453 ~vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 492 (506)
++++|++++++++++++++.+ .++ .+.+.+.++.+
T Consensus 352 ~ll~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~ 386 (391)
T 3tsa_A 352 TVLGDTGFAAAAIKLSDEITA----MPH-PAALVRTLENT 386 (391)
T ss_dssp HHHTCTHHHHHHHHHHHHHHT----SCC-HHHHHHHHHHC
T ss_pred HHHcCHHHHHHHHHHHHHHHc----CCC-HHHHHHHHHHH
Confidence 999999999999999999986 333 34444444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=8.6e-31 Score=269.66 Aligned_cols=358 Identities=16% Similarity=0.183 Sum_probs=243.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCC------------C
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGM------------E 70 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~------------~ 70 (506)
+|||+|++.++.||++|++.|+++|.++||+|++++++...+.+... ++.+..++... .
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 68999999999999999999999999999999999998766666554 78888887410 0
Q ss_pred C-CCCccCHHH----HHHHHHHh-CcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHH
Q 010617 71 P-WEDRNDLGK----LIEKCLQV-MPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVAL 144 (506)
Q Consensus 71 ~-~~~~~~~~~----~~~~~~~~-~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 144 (506)
. ......... ....+... ....+..+.+.++. .+||+||+|....++..+|+.+|||++.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 164 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP--- 164 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC---
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc---
Confidence 0 000000111 11111111 11223344444443 799999999877788899999999999854331100
Q ss_pred HhhccccccCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCccccc
Q 010617 145 VFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCF 224 (506)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 224 (506)
. .
T Consensus 165 ----------------------------------------------------------~-------------~------- 166 (412)
T 3otg_A 165 ----------------------------------------------------------D-------------D------- 166 (412)
T ss_dssp ----------------------------------------------------------S-------------H-------
T ss_pred ----------------------------------------------------------h-------------h-------
Confidence 0 0
Q ss_pred ccccCCCchhHHHHHHHHHHHHh----------hccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCcc
Q 010617 225 WAHIGDWTSQKIFFDLLERNTRA----------MIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWC 294 (506)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~ 294 (506)
....+.+.+.+.... ...++.+++.+.+.++.........-..+-+....
T Consensus 167 --------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 226 (412)
T 3otg_A 167 --------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFA------------ 226 (412)
T ss_dssp --------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCC------------
T ss_pred --------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCC------------
Confidence 000011111111111 13566777777777765522211211111111100
Q ss_pred ccchhhhh-hhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEe
Q 010617 295 EDSNCLKW-LDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMIS 373 (506)
Q Consensus 295 ~~~~l~~~-l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~ 373 (506)
......+| ....+++++|++++||......+.+..+++++++.+.+++|..+.... .+.+. ..++|+.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~ 298 (412)
T 3otg_A 227 EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLD---VSGLG-----EVPANVRLES 298 (412)
T ss_dssp CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEES
T ss_pred CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeC
Confidence 11122345 232345779999999987667788999999999889999988876521 11121 2357889999
Q ss_pred ccchhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHH
Q 010617 374 WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 453 (506)
Q Consensus 374 ~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~ 453 (506)
|+|+.++|+++++ ||+|||.||++||+++|+|+|++|...||..|+.++++. |+|..+.. +.+++++|.++|.+
T Consensus 299 ~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ 372 (412)
T 3otg_A 299 WVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKR 372 (412)
T ss_dssp CCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHH
T ss_pred CCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHH
Confidence 9999999988777 999999999999999999999999999999999999994 99999986 56799999999999
Q ss_pred HhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 010617 454 VLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 492 (506)
Q Consensus 454 vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 492 (506)
+++|+++++++.+.++++.+ ..+ .+.+.+.++.+
T Consensus 373 ll~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l 406 (412)
T 3otg_A 373 LLAEESYRAGARAVAAEIAA----MPG-PDEVVRLLPGF 406 (412)
T ss_dssp HHHCHHHHHHHHHHHHHHHH----SCC-HHHHHTTHHHH
T ss_pred HHhCHHHHHHHHHHHHHHhc----CCC-HHHHHHHHHHH
Confidence 99999999999999999887 343 44444444444
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.4e-26 Score=234.83 Aligned_cols=339 Identities=14% Similarity=0.093 Sum_probs=204.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch--hHHHHhhhcCCCCCCCeEEEecCCC-CCCCC---C
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDG-MEPWE---D 74 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~i~~~~~~~~-~~~~~---~ 74 (506)
|+ .||++...|+.||++|.++||++|.++||+|+|+++.... +.+.+. ++.++.++.. +.... .
T Consensus 1 M~-~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~~~~~~~~~~~ 70 (365)
T 3s2u_A 1 MK-GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVSGLRGKGLKSL 70 (365)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC------------
T ss_pred CC-CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECCCcCCCCHHHH
Confidence 55 4799998888899999999999999999999999876542 234343 6788877632 11111 1
Q ss_pred ccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcc--hHHHHHHHcCCceEEEccchHHHHHHHhhccccc
Q 010617 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLI 152 (506)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 152 (506)
...+..++..+ . ....++++ .+||+||++.... .+..+|+.+|||++..-
T Consensus 71 ~~~~~~~~~~~----~-~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe----------------- 122 (365)
T 3s2u_A 71 VKAPLELLKSL----F-QALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE----------------- 122 (365)
T ss_dssp --CHHHHHHHH----H-HHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE-----------------
T ss_pred HHHHHHHHHHH----H-HHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe-----------------
Confidence 11122222111 1 13344555 8999999996554 46678999999998721
Q ss_pred cCCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCc
Q 010617 153 DDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWT 232 (506)
Q Consensus 153 ~~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 232 (506)
++ .+|++..
T Consensus 123 -~n-------------------------------------------------------~~~G~~n--------------- 131 (365)
T 3s2u_A 123 -QN-------------------------------------------------------AVAGTAN--------------- 131 (365)
T ss_dssp -CS-------------------------------------------------------SSCCHHH---------------
T ss_pred -cc-------------------------------------------------------hhhhhHH---------------
Confidence 11 0111000
Q ss_pred hhHHHHHHHHHHHHhhccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCCceE
Q 010617 233 SQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVV 312 (506)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV 312 (506)
++ ..+.++.++...... .+...+...+|........... . ......+++++|
T Consensus 132 ------r~------l~~~a~~v~~~~~~~-----~~~~~k~~~~g~pvr~~~~~~~-------~----~~~~~~~~~~~i 183 (365)
T 3s2u_A 132 ------RS------LAPIARRVCEAFPDT-----FPASDKRLTTGNPVRGELFLDA-------H----ARAPLTGRRVNL 183 (365)
T ss_dssp ------HH------HGGGCSEEEESSTTS-----SCC---CEECCCCCCGGGCCCT-------T----SSCCCTTSCCEE
T ss_pred ------Hh------hccccceeeeccccc-----ccCcCcEEEECCCCchhhccch-------h----hhcccCCCCcEE
Confidence 00 012234444332211 2223456677765544332100 0 011112345689
Q ss_pred EEEeCccccCCHHHHHHHHHHHhhC----CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchh-hhhcCCCcc
Q 010617 313 YVSFGSFTILDQVQFQELALGLELC----KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL-RVLNHPSIA 387 (506)
Q Consensus 313 ~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~-~lL~h~~v~ 387 (506)
++..||.... ...+.+.+++... +..+++.++.. ..+.+.+ ..+..+.|+.+.+|+++. ++|+.+++
T Consensus 184 lv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~----~~~~~~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl- 255 (365)
T 3s2u_A 184 LVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ----HAEITAE-RYRTVAVEADVAPFISDMAAAYAWADL- 255 (365)
T ss_dssp EECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT----THHHHHH-HHHHTTCCCEEESCCSCHHHHHHHCSE-
T ss_pred EEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc----ccccccc-eecccccccccccchhhhhhhhccceE-
Confidence 9988887543 3334455666544 34566655433 1111111 122446788899999875 79988777
Q ss_pred eEEeccCchhHHHHHHcCCcEEeccCc----ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHH
Q 010617 388 CFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKAR 463 (506)
Q Consensus 388 ~~ItHgG~~sv~eal~~GvP~v~~P~~----~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~ 463 (506)
+|||+|.+|++|++++|+|+|.+|+- .+|..||+.+++. |.|..++. +.+++++|.++|.+++.|++.+++
T Consensus 256 -vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~ 330 (365)
T 3s2u_A 256 -VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRS 330 (365)
T ss_dssp -EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHH
T ss_pred -EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHH
Confidence 99999999999999999999999874 5899999999995 99999975 678999999999999999876554
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHh
Q 010617 464 ALELKEKAMSSVREGGSSYKTFQNFLQWVKT 494 (506)
Q Consensus 464 a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 494 (506)
|++.+++. ....+.+.+.+.++++.+
T Consensus 331 ---m~~~a~~~--~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 331 ---MADQARSL--AKPEATRTVVDACLEVAR 356 (365)
T ss_dssp ---HHHHHHHT--CCTTHHHHHHHHHHHHC-
T ss_pred ---HHHHHHhc--CCccHHHHHHHHHHHHHc
Confidence 44444442 112345555555555543
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=208.31 Aligned_cols=165 Identities=21% Similarity=0.367 Sum_probs=141.7
Q ss_pred ccccchhhhhhhcCCCCceEEEEeCccc-cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEE
Q 010617 293 WCEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQM 371 (506)
Q Consensus 293 ~~~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v 371 (506)
++.++++.+|++..+++++||+++||.. ....+.+..+++++++.+.+++|+.++. ..+ ..++|+++
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~~~--------~~~~~v~~ 72 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----KPD--------TLGLNTRL 72 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----CCT--------TCCTTEEE
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----Ccc--------cCCCcEEE
Confidence 3567889999988766789999999985 4567889999999998899999998654 111 13568889
Q ss_pred EeccchhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHH
Q 010617 372 ISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKV 451 (506)
Q Consensus 372 ~~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai 451 (506)
.+|+||.++|.|+.+++||||||.||++||+++|+|+|++|...||..||.++++ .|+|+.++. +.++.++|.++|
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i 148 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNAL 148 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHH
Confidence 9999999999888888999999999999999999999999999999999999999 599999976 568999999999
Q ss_pred HHHhCChHHHHHHHHHHHHHHh
Q 010617 452 DQVLGNQDFKARALELKEKAMS 473 (506)
Q Consensus 452 ~~vl~d~~~r~~a~~l~~~~~~ 473 (506)
.+++.|++||++++++++.+++
T Consensus 149 ~~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 149 KRVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHCHHHHHHHHHHC-----
T ss_pred HHHHcCHHHHHHHHHHHHHhhC
Confidence 9999999999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.84 E-value=3e-19 Score=180.05 Aligned_cols=339 Identities=14% Similarity=0.107 Sum_probs=203.5
Q ss_pred CCC--CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch--hHHHHhhhcCCCCCCCeEEEecCCCCCCCCCcc
Q 010617 1 MSR--PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (506)
Q Consensus 1 m~~--~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (506)
|++ +||++++.+..||..++..|+++|.++||+|++++..... ..+.+ .++.++.++...... .
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~---~ 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRG---K 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTT---C
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCc---C
Confidence 565 8999999887899999999999999999999999986542 22222 267777765321111 1
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc--chHHHHHHHcCCceEEEccchHHHHHHHhhccccccC
Q 010617 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI--GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (506)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 154 (506)
.....+...... ...+..+.+.++. .+||+|+++... ..+..+++.+|+|++......
T Consensus 70 ~~~~~~~~~~~~-~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 GIKALIAAPLRI-FNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp CHHHHHTCHHHH-HHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred ccHHHHHHHHHH-HHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 111111000000 0112233333333 789999998643 246678888999998632110
Q ss_pred CCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCchh
Q 010617 155 GIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQ 234 (506)
Q Consensus 155 ~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (506)
+ ++ .
T Consensus 130 -----------------------------------------------~----------~~--------~----------- 133 (364)
T 1f0k_A 130 -----------------------------------------------I----------AG--------L----------- 133 (364)
T ss_dssp -----------------------------------------------S----------CC--------H-----------
T ss_pred -----------------------------------------------C----------Cc--------H-----------
Confidence 0 00 0
Q ss_pred HHHHHHHHHHHHhhccccEEEEcCcccccccccccCCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCCceEEE
Q 010617 235 KIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYV 314 (506)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~v 314 (506)
..+ ...+.++.+++.+... .+++..||......... .+. ....+....++++|++
T Consensus 134 --~~~------~~~~~~d~v~~~~~~~--------~~~~~~i~n~v~~~~~~--------~~~-~~~~~~~~~~~~~il~ 188 (364)
T 1f0k_A 134 --TNK------WLAKIATKVMQAFPGA--------FPNAEVVGNPVRTDVLA--------LPL-PQQRLAGREGPVRVLV 188 (364)
T ss_dssp --HHH------HHTTTCSEEEESSTTS--------SSSCEECCCCCCHHHHT--------SCC-HHHHHTTCCSSEEEEE
T ss_pred --HHH------HHHHhCCEEEecChhh--------cCCceEeCCccchhhcc--------cch-hhhhcccCCCCcEEEE
Confidence 000 0123566666654332 12455565433221110 000 0111222234567888
Q ss_pred EeCccccCCHHHHHHHHHHHhhC--CCCEEEEEcCCCCCCCCCCCChhhHH---hhc-CCeEEEeccc-hhhhhcCCCcc
Q 010617 315 SFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQE---RVA-ARGQMISWAP-QLRVLNHPSIA 387 (506)
Q Consensus 315 s~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~lp~~~~~---~~~-~n~~v~~~vp-q~~lL~h~~v~ 387 (506)
..|+... ......+++++... +.++++.++.. . .+.+.+ +.. +|+.+.+|++ ..++++.+++
T Consensus 189 ~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~----~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~- 257 (364)
T 1f0k_A 189 VGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG----S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV- 257 (364)
T ss_dssp ECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT----C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE-
T ss_pred EcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc----h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE-
Confidence 7787532 34445566666544 45556655543 1 123322 222 5889999994 4679988777
Q ss_pred eEEeccCchhHHHHHHcCCcEEeccCc---ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHH
Q 010617 388 CFLSHCGWNSTMEGVSNGIPFLCWPYF---GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 464 (506)
Q Consensus 388 ~~ItHgG~~sv~eal~~GvP~v~~P~~---~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a 464 (506)
+|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++. ++++.++|+++|.++ |++.+++.
T Consensus 258 -~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~ 330 (364)
T 1f0k_A 258 -VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTM 330 (364)
T ss_dssp -EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHH
T ss_pred -EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHH
Confidence 99999999999999999999999987 7999999999984 99998875 556799999999999 77776665
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 465 LELKEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 465 ~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
.+-+.+.. + .-+++.+.+.++.+.++
T Consensus 331 ~~~~~~~~----~-~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 331 AERARAAS----I-PDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHHHTC----C-TTHHHHHHHHHHHHHTT
T ss_pred HHHHHHhh----c-cCHHHHHHHHHHHHHHH
Confidence 55444332 2 23455554444444444
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=1.3e-14 Score=140.23 Aligned_cols=115 Identities=9% Similarity=0.068 Sum_probs=88.5
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeEEEeccchh-hhhcCCC
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQL-RVLNHPS 385 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~~vpq~-~lL~h~~ 385 (506)
.+.|+|++|... .......+++++.... ++.++.+.. .+..+.+.+.. ..|+.+..|+++. ++|..++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 568999999643 3346667888887654 566666544 22333333322 2588999999877 6887666
Q ss_pred cceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeec
Q 010617 386 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 436 (506)
Q Consensus 386 v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~ 436 (506)
+ +||+|| +|++|+++.|+|++++|...+|..||..+++. |.+..+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 6 999999 89999999999999999999999999999995 99999865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.51 E-value=2.4e-14 Score=133.06 Aligned_cols=131 Identities=8% Similarity=0.033 Sum_probs=94.6
Q ss_pred CCCceEEEEeCccccCCHHHHHHH-----HHHHhhCC-CCEEEEEcCCCCCCCCCCCChhhHHhh---------------
Q 010617 307 QPSSVVYVSFGSFTILDQVQFQEL-----ALGLELCK-RPFLWVVRPDITTDANDRYPEGFQERV--------------- 365 (506)
Q Consensus 307 ~~~~vV~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~lp~~~~~~~--------------- 365 (506)
.++++|||+.||... -.+.+..+ +++|...+ .++++.++.... .....+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhcccccccccccccc
Confidence 457799999999732 34444444 48887777 789999886521 0111111111
Q ss_pred -------------cCCeEEEeccchh-hhhc-CCCcceEEeccCchhHHHHHHcCCcEEeccCc----ccchhhHHhhhc
Q 010617 366 -------------AARGQMISWAPQL-RVLN-HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICD 426 (506)
Q Consensus 366 -------------~~n~~v~~~vpq~-~lL~-h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~----~DQ~~na~rv~~ 426 (506)
.-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 1134466888876 7898 8777 99999999999999999999999974 369999999999
Q ss_pred cceeeeEeecCCCCCcCHHHHHHHHHHH
Q 010617 427 FWKVGLKFDRDEGGIITREEIKNKVDQV 454 (506)
Q Consensus 427 ~lG~G~~l~~~~~~~~~~~~l~~ai~~v 454 (506)
.|.|+.+ +.++|.++|.++
T Consensus 178 -~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 -LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp -HSCCCEE--------CSCTTTHHHHHH
T ss_pred -CCCEEEc--------CHHHHHHHHHHH
Confidence 4998765 345677777776
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.42 E-value=7.8e-11 Score=119.20 Aligned_cols=352 Identities=12% Similarity=0.014 Sum_probs=191.2
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCcc
Q 010617 1 MSRPRVLVMPA--P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (506)
Q Consensus 1 m~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (506)
|+++||++++. + ..|.-..+..+++.| +||+|++++............ ...++....++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc----
Confidence 45899998864 3 458888999999999 799999999876654212211 12467777776432111
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcc--hHHHHHHHcCCceEEE-ccchHHHHHHHhhcccccc
Q 010617 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVF-WPSSAASVALVFRIPKLID 153 (506)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgIP~v~~-~~~~~~~~~~~~~~~~~~~ 153 (506)
.. .....+..++++ .+||+|++..... ....+++.+|+|.+++ .........
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---------- 125 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWS---------- 125 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHT----------
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhh----------
Confidence 11 111224445555 7899999765433 4566788899985443 222111000
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCcccccccccchhheeehhccccCCCCCcccceeecCCCCCCCcccccccccCCCch
Q 010617 154 DGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTS 233 (506)
Q Consensus 154 ~~~~~~~~~~~p~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 233 (506)
. ..
T Consensus 126 ---------------------------------------------------------------~-------------~~- 128 (394)
T 3okp_A 126 ---------------------------------------------------------------M-------------LP- 128 (394)
T ss_dssp ---------------------------------------------------------------T-------------SH-
T ss_pred ---------------------------------------------------------------h-------------cc-
Confidence 0 00
Q ss_pred hHHHHHHHHHHHHhhccccEEEEcCccccccccccc--CCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCCce
Q 010617 234 QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSV 311 (506)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~--~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v 311 (506)
..+... ....+.++.+++.|....+.-.... ..++..|........... .......++.+-+.- +++..
T Consensus 129 ---~~~~~~--~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~---~~~~~~~~~~~~~~~-~~~~~ 199 (394)
T 3okp_A 129 ---GSRQSL--RKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTP---ATPEDKSATRKKLGF-TDTTP 199 (394)
T ss_dssp ---HHHHHH--HHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCC---CCHHHHHHHHHHTTC-CTTCC
T ss_pred ---hhhHHH--HHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCC---CCchhhHHHHHhcCC-CcCce
Confidence 000000 1123578889988876654431111 235555554333222110 000011122222221 22346
Q ss_pred EEEEeCcccc-CCHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCChhhH---HhhcCCeEEEeccchhh---hhc
Q 010617 312 VYVSFGSFTI-LDQVQFQELALGLEL--CKRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQMISWAPQLR---VLN 382 (506)
Q Consensus 312 V~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~lp~~~~---~~~~~n~~v~~~vpq~~---lL~ 382 (506)
+++..|+... ...+.+-..+..+.. .+.+++++-.+. ..+.+. ....+|+.+.+|+|+.+ +++
T Consensus 200 ~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 200 VIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--------YESTLRRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp EEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred EEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 7777887632 223333333333322 245555443221 112222 23457899999998764 676
Q ss_pred CCCcceEEe-----------ccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHH
Q 010617 383 HPSIACFLS-----------HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKV 451 (506)
Q Consensus 383 h~~v~~~It-----------HgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai 451 (506)
.+++ +|. -|.-+++.||+++|+|+|+.+.. .....+.+ |.|..++. -+.+++.++|
T Consensus 272 ~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i 338 (394)
T 3okp_A 272 AADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELL 338 (394)
T ss_dssp HCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHH
T ss_pred hCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHH
Confidence 7777 665 45567999999999999997653 23334444 57777754 4799999999
Q ss_pred HHHhCChHHHHHHHHHH-HHHHhhhhcCCChHHHHHHHHHHHHhccccC
Q 010617 452 DQVLGNQDFKARALELK-EKAMSSVREGGSSYKTFQNFLQWVKTNALAH 499 (506)
Q Consensus 452 ~~vl~d~~~r~~a~~l~-~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~ 499 (506)
.+++.|++.+++..+-+ +.+++ .-+.....+++.+.+.+..+.+
T Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 339 IELLDDPIRRAAMGAAGRAHVEA----EWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHSCCC--
T ss_pred HHHHhCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHhccCc
Confidence 99999886544433332 22222 2344555666666666555443
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.38 E-value=4.5e-10 Score=115.58 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=64.0
Q ss_pred cCCeEEEeccchh---hhhcCCCcceEEec----cCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCC
Q 010617 366 AARGQMISWAPQL---RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 438 (506)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~h~~v~~~ItH----gG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~ 438 (506)
.+|+.+.+++|+. ++++.+++ +|.- |.-+++.||+++|+|+|+.+. ......+++. +.|..++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 4789999999875 57777777 6654 334689999999999998764 3355556653 67888754
Q ss_pred CCCcCHHHHHHHHHHHhCChHHHH
Q 010617 439 GGIITREEIKNKVDQVLGNQDFKA 462 (506)
Q Consensus 439 ~~~~~~~~l~~ai~~vl~d~~~r~ 462 (506)
-+.++++++|.+++.|++.++
T Consensus 376 ---~d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 376 ---HSPHAWADALATLLDDDETRI 396 (438)
T ss_dssp ---CCHHHHHHHHHHHHHCHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCHHHHH
Confidence 479999999999999875443
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.32 E-value=5.3e-11 Score=120.15 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=85.2
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhh-----CCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeEEEeccch---h
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---L 378 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~~vpq---~ 378 (506)
+++|+++.|...... .+..+++|+.. .+.++++..+.+ ..+.+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457777777542221 34445555533 244554443322 01112222221 358888865554 4
Q ss_pred hhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 379 ~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
++++.+++ ||+.+| |.+.||+++|+|+|+.+...++.+. .+. |.|..++ .++++|.++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 78877666 999883 4466999999999998876666653 342 7887763 27999999999999998
Q ss_pred HHHHHHHH
Q 010617 459 DFKARALE 466 (506)
Q Consensus 459 ~~r~~a~~ 466 (506)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 66554443
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.29 E-value=2.4e-11 Score=122.85 Aligned_cols=166 Identities=13% Similarity=0.100 Sum_probs=98.8
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhh-----CCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeEEEeccch---
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ--- 377 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~~vpq--- 377 (506)
++++|+++.|....... .+..+++|+.. .+.++++..+.. ..+.+.+.+.. .+|+.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 35678888886543222 34445555533 234555433211 00112222221 268888776664
Q ss_pred hhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 378 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 378 ~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
.++++.+++ ||+.+|. .+.||+++|+|+|+.+..++..+ +.+. |.|..++. +.++|.++|.+++.|
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~------d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT------DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS------SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC------CHHHHHHHHHHHHhC
Confidence 467878777 9988854 48899999999999987444332 3343 88888742 799999999999998
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhccccC
Q 010617 458 QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAH 499 (506)
Q Consensus 458 ~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~ 499 (506)
++.+++.. +..++. ..+.+++.+.+.++.+.+.+.+|
T Consensus 343 ~~~~~~~~---~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~ 379 (384)
T 1vgv_A 343 ENEYQAMS---RAHNPY--GDGQACSRILEALKNNRISLGSH 379 (384)
T ss_dssp HHHHHHHH---SSCCTT--CCSCHHHHHHHHHHHTCCCC---
T ss_pred hHHHhhhh---hccCCC--cCCCHHHHHHHHHHHHHHhhccc
Confidence 86554433 222322 12345666666666666655554
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.24 E-value=5.3e-09 Score=107.14 Aligned_cols=164 Identities=11% Similarity=-0.007 Sum_probs=94.3
Q ss_pred eEEEEeCccc-c-CCHHHHHHHHHHHhh----CCCCEEEEEcCCCCCCCCCCCChh---hHHhhcCCeEEEeccchhh--
Q 010617 311 VVYVSFGSFT-I-LDQVQFQELALGLEL----CKRPFLWVVRPDITTDANDRYPEG---FQERVAARGQMISWAPQLR-- 379 (506)
Q Consensus 311 vV~vs~GS~~-~-~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~lp~~---~~~~~~~n~~v~~~vpq~~-- 379 (506)
.+++..|+.. . ...+.+-..+..+.. .+.+++++-.+. ....+. +.++.++++.+.+|+++.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~------~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 325 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD------PELEGWARSLEEKHGNVKVITEMLSREFVR 325 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC------HHHHHHHHHHHHHCTTEEEECSCCCHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCC------hhHHHHHHHHHhhcCCEEEEcCCCCHHHHH
Confidence 7888888775 3 234444444444444 344444333221 000011 2223343444568899874
Q ss_pred -hhcCCCcceEEec----cCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHH
Q 010617 380 -VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (506)
Q Consensus 380 -lL~h~~v~~~ItH----gG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~v 454 (506)
+++.+++ +|.- |--+++.||+++|+|+|+... ......+.. |.|..++. -+.++++++|.++
T Consensus 326 ~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~l 392 (439)
T 3fro_A 326 ELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-----GDPGELANAILKA 392 (439)
T ss_dssp HHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-----TCHHHHHHHHHHH
T ss_pred HHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-----CCHHHHHHHHHHH
Confidence 6777777 6632 334799999999999998654 334444443 78888864 4799999999999
Q ss_pred hC-ChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhccc
Q 010617 455 LG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNAL 497 (506)
Q Consensus 455 l~-d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~ 497 (506)
+. |++.+++..+-+.+..+ .-+-....+++++-+.+...
T Consensus 393 l~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 393 LELSRSDLSKFRENCKKRAM----SFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp HHHTTTTTHHHHHHHHHHHH----TSCHHHHHHHHHHHHHTCSC
T ss_pred HhcCHHHHHHHHHHHHHHHh----hCcHHHHHHHHHHHHHHHHH
Confidence 98 76443333222222222 23445555666665555443
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.24 E-value=1.4e-10 Score=118.38 Aligned_cols=162 Identities=10% Similarity=0.057 Sum_probs=94.9
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHhh-----CCCCEEEEEcCCCCCCCCCCCChhhHHh--hcCCeEEEeccch--
Q 010617 307 QPSSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQ-- 377 (506)
Q Consensus 307 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~~vpq-- 377 (506)
.++++++++.|....... .+..+++++.. .+.++++....+ ..+.+.+.+. ..+|+.+.+++++
T Consensus 222 ~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~ 294 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN------PAVREKAMAILGGHERIHLIEPLDAID 294 (403)
T ss_dssp TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHH
Confidence 345677777653211111 24555555533 344555554322 0011112211 2368889988864
Q ss_pred -hhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhC
Q 010617 378 -LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (506)
Q Consensus 378 -~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~ 456 (506)
..+++++++ +|+-.|.. ..||.+.|+|+|++|-..++.+. + +. |.|..+. .+.++|.+++.+++.
T Consensus 295 ~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e~---v-~~-g~~~lv~------~d~~~l~~ai~~ll~ 360 (403)
T 3ot5_A 295 FHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPEG---I-EA-GTLKLIG------TNKENLIKEALDLLD 360 (403)
T ss_dssp HHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHHH---H-HH-TSEEECC------SCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchhh---e-eC-CcEEEcC------CCHHHHHHHHHHHHc
Confidence 367767666 99887422 26999999999999766666542 3 43 8877764 279999999999999
Q ss_pred ChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHh
Q 010617 457 NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 494 (506)
Q Consensus 457 d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 494 (506)
|+..+++..+.+..+ ..|.+.+.+.+.+..+..
T Consensus 361 ~~~~~~~m~~~~~~~-----g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 361 NKESHDKMAQAANPY-----GDGFAANRILAAIKSHFE 393 (403)
T ss_dssp CHHHHHHHHHSCCTT-----CCSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhhcCcc-----cCCcHHHHHHHHHHHHhC
Confidence 987665544322222 234445555555555443
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.22 E-value=1.5e-10 Score=118.09 Aligned_cols=138 Identities=12% Similarity=0.080 Sum_probs=84.8
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhh-----CCCCEEEEEcCCCCCCCCCCCChhhHHh--hcCCeEEEeccc---h
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAP---Q 377 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~~vp---q 377 (506)
++++|+++.+-....... +..+++|+.. .+.++++..+.+ ..+.+.+.+. ..+|+.+.++++ .
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 356777765321222222 4566666643 245555544322 0111122221 236888877765 3
Q ss_pred hhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 378 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 378 ~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
..+++.+++ +|+-.| |.+.||.+.|+|+|+..-..++.+ +.+. |.+..+. .++++|.+++.+++.|
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~------~d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVG------TNQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECT------TCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcC------CCHHHHHHHHHHHHcC
Confidence 467877777 999987 555799999999999865555432 2343 8775553 1699999999999999
Q ss_pred hHHHHHHHH
Q 010617 458 QDFKARALE 466 (506)
Q Consensus 458 ~~~r~~a~~ 466 (506)
+..+++..+
T Consensus 368 ~~~~~~m~~ 376 (396)
T 3dzc_A 368 PQAYQAMSQ 376 (396)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 876654443
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.19 E-value=4.5e-09 Score=106.66 Aligned_cols=87 Identities=9% Similarity=0.113 Sum_probs=65.8
Q ss_pred cCCeEEEeccchh---hhhcCCCcceEEe----ccCc-hhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecC
Q 010617 366 AARGQMISWAPQL---RVLNHPSIACFLS----HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 437 (506)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~h~~v~~~It----HgG~-~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~ 437 (506)
.+|+.+.+++++. +++..+++ +|. +.|+ +++.||+++|+|+|+.+. ......+.+. +.|...+.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 5788899999975 67878777 663 3344 599999999999998765 3455666653 67877754
Q ss_pred CCCCcCHHHHHHHHHHHhCChHHHHHH
Q 010617 438 EGGIITREEIKNKVDQVLGNQDFKARA 464 (506)
Q Consensus 438 ~~~~~~~~~l~~ai~~vl~d~~~r~~a 464 (506)
-+.+++.++|.+++.|+..+++.
T Consensus 334 ----~d~~~l~~~i~~l~~~~~~~~~~ 356 (406)
T 2gek_A 334 ----DDADGMAAALIGILEDDQLRAGY 356 (406)
T ss_dssp ----TCHHHHHHHHHHHHHCHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCHHHHHHH
Confidence 37899999999999988655443
No 33
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.19 E-value=6.5e-10 Score=110.52 Aligned_cols=133 Identities=13% Similarity=0.071 Sum_probs=85.6
Q ss_pred EEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchh---hhhcCCCcce
Q 010617 312 VYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIAC 388 (506)
Q Consensus 312 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~---~lL~h~~v~~ 388 (506)
+++..|... ...-...++++++..+.+++++-.+. ..+.+ ..+.++..+|+.+.+|+++. ++++.+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 455567653 23345566777766677766554322 00011 12233445899999999986 67878787
Q ss_pred EE--ec-----------cC-chhHHHHHHcCCcEEeccCcccchhhHHhhhc--cceeeeEeecCCCCCcCHHHHHHHHH
Q 010617 389 FL--SH-----------CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICD--FWKVGLKFDRDEGGIITREEIKNKVD 452 (506)
Q Consensus 389 ~I--tH-----------gG-~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~--~lG~G~~l~~~~~~~~~~~~l~~ai~ 452 (506)
+| +. -| -+++.||+++|+|+|+.... .+...+++ . +.|..++ . +.++++++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~-----~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTD-----F-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSC-----C-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcC-----C-CHHHHHHHHH
Confidence 65 32 33 36899999999999987753 35555554 3 5666663 3 8999999999
Q ss_pred HHhCChHHHHHHHHHH
Q 010617 453 QVLGNQDFKARALELK 468 (506)
Q Consensus 453 ~vl~d~~~r~~a~~l~ 468 (506)
++++ ++++++..
T Consensus 304 ~l~~----~~~~~~~~ 315 (342)
T 2iuy_A 304 GLPA----SDEVRRAA 315 (342)
T ss_dssp TSCC----HHHHHHHH
T ss_pred HHHH----HHHHHHHH
Confidence 9996 45554443
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.18 E-value=8.8e-09 Score=108.00 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=63.1
Q ss_pred cCCeEEEeccchh---hhhcCC----CcceEEec---cC-chhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEe
Q 010617 366 AARGQMISWAPQL---RVLNHP----SIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKF 434 (506)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~h~----~v~~~ItH---gG-~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l 434 (506)
.+++.+.+++|+. ++++.+ ++ +|.- -| -.++.||+++|+|+|+.... .....+.+. ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCC-ceEEEe
Confidence 4789999999876 466666 66 6632 23 36899999999999987643 344555552 478888
Q ss_pred ecCCCCCcCHHHHHHHHHHHhCChHHHHH
Q 010617 435 DRDEGGIITREEIKNKVDQVLGNQDFKAR 463 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~ai~~vl~d~~~r~~ 463 (506)
+. -+.++++++|.+++.|+..+++
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~~ 430 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWSA 430 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHHH
Confidence 54 4789999999999999865443
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.18 E-value=6.5e-10 Score=111.81 Aligned_cols=135 Identities=14% Similarity=0.133 Sum_probs=82.7
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhhC-----CCCEEEEEcCCCCCCCCCCCChhhHHhhc--CCeEEEeccchh--
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERVA--ARGQMISWAPQL-- 378 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~lp~~~~~~~~--~n~~v~~~vpq~-- 378 (506)
++++|+++.|...... ..+..+++|+... +.++++ +.. ....+.+.+.+... +|+.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVH----MNPVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECC----SCHHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCC----CCHHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 3557777787643221 2345566666432 334333 221 00111112222223 688887777654
Q ss_pred -hhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 379 -RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 379 -~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
++++.+++ ||+.+| +.+.||+++|+|+|+....+... ..+ +. |.|..++ . +.++|+++|.+++.|
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~~-g~g~~v~-----~-d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-EA-GTLKLAG-----T-DEETIFSLADELLSD 342 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-HT-TSEEECC-----S-CHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-cC-CceEEcC-----C-CHHHHHHHHHHHHhC
Confidence 67777777 898874 45889999999999985433332 223 42 7887764 2 789999999999998
Q ss_pred hHHHHH
Q 010617 458 QDFKAR 463 (506)
Q Consensus 458 ~~~r~~ 463 (506)
++.+++
T Consensus 343 ~~~~~~ 348 (375)
T 3beo_A 343 KEAHDK 348 (375)
T ss_dssp HHHHHH
T ss_pred hHhHhh
Confidence 865554
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.16 E-value=6.2e-08 Score=98.08 Aligned_cols=218 Identities=9% Similarity=-0.020 Sum_probs=113.5
Q ss_pred hccccEEEEcCccccccccccc--CCceeeecccccCCCCCCCCCCCccccchhhhhhhcCCCCceEEEEeCcccc-CCH
Q 010617 248 MIAVNFHFCNSTYELESEAFTT--FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQ 324 (506)
Q Consensus 248 ~~~~~~~l~ns~~~le~~~~~~--~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~-~~~ 324 (506)
...++.+++.|....+.-.... ..++..|.......... .....++.+-+.-. ++..+++..|.... ...
T Consensus 154 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~ 226 (394)
T 2jjm_A 154 IEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYF------KRDMTQLKKEYGIS-ESEKILIHISNFRKVKRV 226 (394)
T ss_dssp HHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCGGGTH
T ss_pred HhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcC------CcchHHHHHHcCCC-CCCeEEEEeeccccccCH
Confidence 3578888888876544321111 23555554433322211 01111222222211 23356677787632 223
Q ss_pred HHHHHHHHHHh-hCCCCEEEEEcCCCCCCCCCCCChhhHHh-----hcCCeEEEeccch-hhhhcCCCcceEE----ecc
Q 010617 325 VQFQELALGLE-LCKRPFLWVVRPDITTDANDRYPEGFQER-----VAARGQMISWAPQ-LRVLNHPSIACFL----SHC 393 (506)
Q Consensus 325 ~~~~~~~~al~-~~~~~~i~~~~~~~~~~~~~~lp~~~~~~-----~~~n~~v~~~vpq-~~lL~h~~v~~~I----tHg 393 (506)
+.+-..+..+. +.+.+++++ +.. +..+.+.+. +.+|+.+.++..+ .++++.+++ +| .-|
T Consensus 227 ~~li~a~~~l~~~~~~~l~i~-G~g-------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~ 296 (394)
T 2jjm_A 227 QDVVQAFAKIVTEVDAKLLLV-GDG-------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKES 296 (394)
T ss_dssp HHHHHHHHHHHHSSCCEEEEE-CCC-------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCS
T ss_pred HHHHHHHHHHHhhCCCEEEEE-CCc-------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCC
Confidence 33333333332 234444433 322 111222221 1367777776543 468877777 77 455
Q ss_pred CchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHHHHHHHHH-HHHH
Q 010617 394 GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELK-EKAM 472 (506)
Q Consensus 394 G~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~~l~-~~~~ 472 (506)
.-+++.||+++|+|+|+.+.. .....+++. +.|..++. -+.++++++|.+++.|++.+++..+-+ +.++
T Consensus 297 ~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 366 (394)
T 2jjm_A 297 FGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARESVY 366 (394)
T ss_dssp CCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 668999999999999987753 233344442 57877754 378999999999999886544333222 2221
Q ss_pred hhhhcCCChHHHHHHHHHHHHhcc
Q 010617 473 SSVREGGSSYKTFQNFLQWVKTNA 496 (506)
Q Consensus 473 ~~~~~gg~~~~~~~~~~~~~~~~~ 496 (506)
+ .-+.....+++++.+.+..
T Consensus 367 ~----~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 367 E----QFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp H----HSCHHHHHHHHHHHHHHTC
T ss_pred H----hCCHHHHHHHHHHHHHHHH
Confidence 2 2343445555555554443
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.97 E-value=2e-07 Score=93.22 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=89.0
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCC----CE-EEEEcCCCCCCCCCCCChhhHH---h--hcCCeEEEeccch-
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKR----PF-LWVVRPDITTDANDRYPEGFQE---R--VAARGQMISWAPQ- 377 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~lp~~~~~---~--~~~n~~v~~~vpq- 377 (506)
+..+++..|+... ...+..+++++..... .+ ++.++.. . .+.+.+ + ..+|+.+.++..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 4467777887533 2334556666655432 22 2333322 1 122222 2 2478888887543
Q ss_pred hhhhcCCCcceEEe----ccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHH
Q 010617 378 LRVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 453 (506)
Q Consensus 378 ~~lL~h~~v~~~It----HgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~ 453 (506)
.++++.+++ +|. -|.-+++.||+++|+|+|+.... .+...+++. +.|..++ ..-+.+++.++|.+
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIA----EPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeC----CCCCHHHHHHHHHH
Confidence 468877777 665 45668999999999999997653 345566663 7888885 12479999999999
Q ss_pred HhCChHHHHHHHHHH
Q 010617 454 VLGNQDFKARALELK 468 (506)
Q Consensus 454 vl~d~~~r~~a~~l~ 468 (506)
++.|++.+++..+-+
T Consensus 334 l~~~~~~~~~~~~~~ 348 (374)
T 2iw1_A 334 ALTQSPLRMAWAENA 348 (374)
T ss_dssp HHHCHHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHH
Confidence 999886555444333
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.91 E-value=3.2e-07 Score=93.50 Aligned_cols=84 Identities=12% Similarity=0.004 Sum_probs=62.3
Q ss_pred cCCeEEEeccc---h---hhhhcCCCcceEEecc----CchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEee
Q 010617 366 AARGQMISWAP---Q---LRVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 435 (506)
Q Consensus 366 ~~n~~v~~~vp---q---~~lL~h~~v~~~ItHg----G~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~ 435 (506)
.+|+.+.+|++ + .++++.+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+.+. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 47899999876 3 357777777 66544 35789999999999998764 3455666653 6777762
Q ss_pred cCCCCCcCHHHHHHHHHHHhCChHHHHH
Q 010617 436 RDEGGIITREEIKNKVDQVLGNQDFKAR 463 (506)
Q Consensus 436 ~~~~~~~~~~~l~~ai~~vl~d~~~r~~ 463 (506)
+.++++++|.+++.|+..+++
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~ 385 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKE 385 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHH
T ss_pred -------CHHHHHHHHHHHHhCHHHHHH
Confidence 689999999999998865544
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.79 E-value=3.2e-08 Score=100.18 Aligned_cols=130 Identities=13% Similarity=0.097 Sum_probs=82.9
Q ss_pred CceEEEEeCccccCC-HHHHHHHHHHHhhC----CCCEEEEEcCCCCCCCCCCCChhhHHh---h--cCCeEEEeccc--
Q 010617 309 SSVVYVSFGSFTILD-QVQFQELALGLELC----KRPFLWVVRPDITTDANDRYPEGFQER---V--AARGQMISWAP-- 376 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~lp~~~~~~---~--~~n~~v~~~vp-- 376 (506)
++.|+++.|...... .+.+..+++|+.+. +.++|+...+. +.+.+.+. . .+|+.+.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~ 274 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIRFLPAFSFT 274 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEEECCCCCHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEEEEcCCCHH
Confidence 568888887653332 24566777777543 56666654321 11111111 1 35777765554
Q ss_pred -hhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 377 -QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 377 -q~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
...+++++++ +|+-.|. .+.||.+.|+|+|+++...+.++ .+ +. |.++.+. .+.++|.+++.+++
T Consensus 275 ~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~~-G~~~lv~------~d~~~i~~ai~~ll 340 (385)
T 4hwg_A 275 DYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-DA-GTLIMSG------FKAERVLQAVKTIT 340 (385)
T ss_dssp HHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-HH-TCCEECC------SSHHHHHHHHHHHH
T ss_pred HHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-hc-CceEEcC------CCHHHHHHHHHHHH
Confidence 4578878777 9998875 46899999999999987554222 23 43 8776663 27999999999999
Q ss_pred CChHH
Q 010617 456 GNQDF 460 (506)
Q Consensus 456 ~d~~~ 460 (506)
+|+..
T Consensus 341 ~d~~~ 345 (385)
T 4hwg_A 341 EEHDN 345 (385)
T ss_dssp TTCBT
T ss_pred hChHH
Confidence 88743
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.66 E-value=4.6e-06 Score=86.76 Aligned_cols=161 Identities=9% Similarity=-0.005 Sum_probs=91.9
Q ss_pred eEEEEeCccccC-CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhh---HHhhcCCeE-EEeccchh---hhhc
Q 010617 311 VVYVSFGSFTIL-DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGF---QERVAARGQ-MISWAPQL---RVLN 382 (506)
Q Consensus 311 vV~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~---~~~~~~n~~-v~~~vpq~---~lL~ 382 (506)
.+++..|..... ..+.+-..+..+...+.+++++-.++ ..+.+.+ .++.++|+. +.++ +++ ++++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 477788876432 23333333333333466666655332 0111222 223347887 5677 543 5687
Q ss_pred CCCcceEEec----cCchhHHHHHHcCCcEEeccCcccchhhHHhhhccc---------eeeeEeecCCCCCcCHHHHHH
Q 010617 383 HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIKN 449 (506)
Q Consensus 383 h~~v~~~ItH----gG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~l---------G~G~~l~~~~~~~~~~~~l~~ 449 (506)
.+++ +|.- |--.++.||+++|+|+|+.... .....+.+ - +.|..++. -+.++|++
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~ 432 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAATGVQFSP-----VTLDGLKQ 432 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCcceEeCC-----CCHHHHHH
Confidence 7777 6632 3346899999999999987653 34444543 2 47777754 47899999
Q ss_pred HHHHHh---CChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhcc
Q 010617 450 KVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 496 (506)
Q Consensus 450 ai~~vl---~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 496 (506)
+|.+++ .|++.+++.. +..++ +.-+-....+++++-+.+..
T Consensus 433 ~i~~ll~~~~~~~~~~~~~---~~~~~---~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 433 AIRRTVRYYHDPKLWTQMQ---KLGMK---SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHHHTCHHHHHHHH---HHHHT---CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHH---HHHHH---HhCChHHHHHHHHHHHHHhh
Confidence 999999 7876554333 33332 23333444445554444443
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.63 E-value=1.1e-05 Score=83.98 Aligned_cols=169 Identities=13% Similarity=0.067 Sum_probs=93.8
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhh---HHhhcCCeE-EEeccch--hhhhc
Q 010617 310 SVVYVSFGSFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGF---QERVAARGQ-MISWAPQ--LRVLN 382 (506)
Q Consensus 310 ~vV~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~---~~~~~~n~~-v~~~vpq--~~lL~ 382 (506)
..+++..|.... -..+.+-..+..+.+.+.+++++-.+. ..+.+.+ .++..+++. +.++... .++++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 365 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMG 365 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHH
Confidence 356667776532 223333333333333466666555332 0111222 223346786 6678333 25787
Q ss_pred CCCcceEEec----cCchhHHHHHHcCCcEEeccCcccchhhHHhhhccc---------eeeeEeecCCCCCcCHHHHHH
Q 010617 383 HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIKN 449 (506)
Q Consensus 383 h~~v~~~ItH----gG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~l---------G~G~~l~~~~~~~~~~~~l~~ 449 (506)
.+++ +|.- |.-.++.||+++|+|+|+.... .....+.+ - +.|..++. -+.++|++
T Consensus 366 ~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~ 433 (485)
T 2qzs_A 366 GADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVASGFVFED-----SNAWSLLR 433 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHHH
T ss_pred hCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-CccccccccccceEEECC-----CCHHHHHH
Confidence 7777 6632 3346899999999999987542 34444543 2 37777754 47999999
Q ss_pred HHHHHh---CChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhccccCCCC
Q 010617 450 KVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAHNSP 502 (506)
Q Consensus 450 ai~~vl---~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 502 (506)
+|.+++ .|++.+++.. +..++ +.-+-...++++++-+.+....+..+
T Consensus 434 ~i~~ll~~~~~~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~~~~~~~~~ 483 (485)
T 2qzs_A 434 AIRRAFVLWSRPSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYRLKLEHHHH 483 (485)
T ss_dssp HHHHHHHHHTSHHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHcCCHHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHHhhhhhccc
Confidence 999999 6776554433 22232 24444555666666666655555544
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.60 E-value=5.4e-05 Score=80.28 Aligned_cols=121 Identities=10% Similarity=-0.024 Sum_probs=74.7
Q ss_pred CCeEEEeccchh---hhhcCCCcceEEe---ccCchhHHHHHHcCCcEEeccCcccch-hhHHhhhccceeeeEeecCCC
Q 010617 367 ARGQMISWAPQL---RVLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFGDQF-LNERYICDFWKVGLKFDRDEG 439 (506)
Q Consensus 367 ~n~~v~~~vpq~---~lL~h~~v~~~It---HgG~~sv~eal~~GvP~v~~P~~~DQ~-~na~rv~~~lG~G~~l~~~~~ 439 (506)
+++.+.+++++. ++++.+++ ||. .|+-+++.||+++|+|+|++|-..=.. ..+..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 678899999865 45777777 662 256679999999999999977431111 11233444 36665553
Q ss_pred CCcCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhccc
Q 010617 440 GIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNAL 497 (506)
Q Consensus 440 ~~~~~~~l~~ai~~vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~ 497 (506)
. +.+++.+++.+++.|+..+++..+-+.+.... .+.-+.....+++.+-+.+...
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTALHARVDVLRRA-SGVFHMDGFADDFGALLQALAR 561 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-SSTTCHHHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHH
Confidence 1 79999999999999987665544333222200 1234444444555544444433
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.55 E-value=1e-05 Score=89.02 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=59.1
Q ss_pred cCCeEEEe----ccchhhhhc----CCCcceEEec----cCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeE
Q 010617 366 AARGQMIS----WAPQLRVLN----HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 433 (506)
Q Consensus 366 ~~n~~v~~----~vpq~~lL~----h~~v~~~ItH----gG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~ 433 (506)
.+++.+.+ ++++.++.. .+++ ||.- |--.++.||+++|+|+|+... ......+.+. +.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHccC-CcEEE
Confidence 47888887 455565554 3455 6643 334699999999999998643 3355566553 67888
Q ss_pred eecCCCCCcCHHHHHHHHHHHh----CChHHHHHH
Q 010617 434 FDRDEGGIITREEIKNKVDQVL----GNQDFKARA 464 (506)
Q Consensus 434 l~~~~~~~~~~~~l~~ai~~vl----~d~~~r~~a 464 (506)
++. -+.++++++|.+++ .|+..+++.
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m 741 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWDEI 741 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 864 47899999997766 777654443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.49 E-value=5.6e-05 Score=76.56 Aligned_cols=111 Identities=7% Similarity=0.029 Sum_probs=68.2
Q ss_pred eEEEeccchh---hhhcCCCcceEEe----ccCchhHHHHHHcCCcEEeccCcccchhhHHhhhcccee-----------
Q 010617 369 GQMISWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKV----------- 430 (506)
Q Consensus 369 ~~v~~~vpq~---~lL~h~~v~~~It----HgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~----------- 430 (506)
+.+.+|+++. ++++.+++ +|. -|.-.++.||+++|+|+|+.... .....+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccc
Confidence 5566999965 46777777 663 23346899999999999986643 23333333 22
Q ss_pred -----ee--EeecCCCCCcCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhcc
Q 010617 431 -----GL--KFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 496 (506)
Q Consensus 431 -----G~--~l~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 496 (506)
|. .+.. -+.++++++| +++.|++.+++..+-+.+.. .+.-+-....+++.+-+.+..
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~---~~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFV---KTKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHH---TTSCCHHHHHHHHHHHHHHHT
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHH
Confidence 55 5543 3899999999 99999876554443333322 223344444555555444443
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.34 E-value=1.7e-06 Score=77.30 Aligned_cols=139 Identities=11% Similarity=0.057 Sum_probs=90.0
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCChhh---HHhhcCCeEEEeccch---hhhhcC
Q 010617 311 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGF---QERVAARGQMISWAPQ---LRVLNH 383 (506)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~---~~~~~~n~~v~~~vpq---~~lL~h 383 (506)
.+++..|+... ...+..+++++... +.+++++-.+. ....+.... ...+.+|+.+.+|+++ .++++.
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 45566776542 23456667777666 45666554333 111121111 1123569999999998 467877
Q ss_pred CCcceEEe---ccCc-hhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChH
Q 010617 384 PSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD 459 (506)
Q Consensus 384 ~~v~~~It---HgG~-~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~ 459 (506)
+++ +|. +.|+ .++.||+++|+|+|+... ..+...+++. +.|..+ . -+.+++.++|.+++.|+.
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 777 665 3344 599999999999998754 4455566653 677777 4 279999999999998876
Q ss_pred H-HHHHHHHH
Q 010617 460 F-KARALELK 468 (506)
Q Consensus 460 ~-r~~a~~l~ 468 (506)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4 55555443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.29 E-value=0.00016 Score=73.52 Aligned_cols=76 Identities=8% Similarity=0.016 Sum_probs=58.1
Q ss_pred cCCeEEEeccchh---hhhcCCCcceEEe---ccCc-hhHHHHH-------HcCCcEEeccCcccchhhHHhhhccceee
Q 010617 366 AARGQMISWAPQL---RVLNHPSIACFLS---HCGW-NSTMEGV-------SNGIPFLCWPYFGDQFLNERYICDFWKVG 431 (506)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~h~~v~~~It---HgG~-~sv~eal-------~~GvP~v~~P~~~DQ~~na~rv~~~lG~G 431 (506)
.+|+.+.+++|+. ++++.+++ +|. +-|. +++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5788899999876 46777777 653 3344 6789999 99999998754 5552 567
Q ss_pred eE-eecCCCCCcCHHHHHHHHHHHhCChH
Q 010617 432 LK-FDRDEGGIITREEIKNKVDQVLGNQD 459 (506)
Q Consensus 432 ~~-l~~~~~~~~~~~~l~~ai~~vl~d~~ 459 (506)
.. ++. -+.++|+++|.+++.|+.
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 76 654 379999999999998876
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.07 E-value=0.00033 Score=70.33 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=61.5
Q ss_pred CeEEEeccc-hhhhhcCCCcceEEe---c--cCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCC
Q 010617 368 RGQMISWAP-QLRVLNHPSIACFLS---H--CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 441 (506)
Q Consensus 368 n~~v~~~vp-q~~lL~h~~v~~~It---H--gG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~ 441 (506)
++.+.++.. -..+++.+++ ++. . +|..++.||+++|+|+|+-|...+..+....+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 455555443 3357766665 543 1 23478999999999999877766666666655443 7766552
Q ss_pred cCHHHHHHHHHHHhCCh---HHHHHHHHHHHH
Q 010617 442 ITREEIKNKVDQVLGNQ---DFKARALELKEK 470 (506)
Q Consensus 442 ~~~~~l~~ai~~vl~d~---~~r~~a~~l~~~ 470 (506)
+.++|+++|.++++|+ .+.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 6899999999999871 345555554443
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.84 E-value=0.00019 Score=78.29 Aligned_cols=144 Identities=15% Similarity=0.161 Sum_probs=96.6
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhh------cCCeEEEeccchhhhh
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV------AARGQMISWAPQLRVL 381 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~------~~n~~v~~~vpq~~lL 381 (506)
++.+||.||.......++.+....+-|++.+-.++|...... ....++.+.. ++++.+.+.+|..+-|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA------VGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG------GGHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH------HHHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 456999999999999999999999999999999999886541 1112222221 3667777888877655
Q ss_pred c-CCCcceEEe---ccCchhHHHHHHcCCcEEeccCc-ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhC
Q 010617 382 N-HPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYF-GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (506)
Q Consensus 382 ~-h~~v~~~It---HgG~~sv~eal~~GvP~v~~P~~-~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~ 456 (506)
+ +..+++++- .+|.+|++|||++|||+|.+|=. .=-..-+..+.. +|+...+-. +.++-.+..-++-.
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~~a~~la~ 667 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYEDIAVKLGT 667 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHHHHHHHHH
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHHHHHHHhc
Confidence 3 333444765 88999999999999999999932 122223334444 577766643 45554444444555
Q ss_pred ChHHHHHH
Q 010617 457 NQDFKARA 464 (506)
Q Consensus 457 d~~~r~~a 464 (506)
|...++..
T Consensus 668 d~~~l~~l 675 (723)
T 4gyw_A 668 DLEYLKKV 675 (723)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 76554443
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.72 E-value=0.00019 Score=75.71 Aligned_cols=141 Identities=10% Similarity=0.057 Sum_probs=95.6
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEE--cCCCCCCCCCCCChhhH-----HhhcCCeEEEeccchhhhh-
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVV--RPDITTDANDRYPEGFQ-----ERVAARGQMISWAPQLRVL- 381 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~lp~~~~-----~~~~~n~~v~~~vpq~~lL- 381 (506)
.++|.+|+......++.++...+.+++.+..++|.. +.. ...-..+. ..+.+++.+.+.+|+.+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 599999999888899999999999998888877753 221 01111111 1244678888999877654
Q ss_pred --cCCCcceEEe---ccCchhHHHHHHcCCcEEeccCcc-cchhhHHhhhccceeeeE-eecCCCCCcCHHHHHHHHHHH
Q 010617 382 --NHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQV 454 (506)
Q Consensus 382 --~h~~v~~~It---HgG~~sv~eal~~GvP~v~~P~~~-DQ~~na~rv~~~lG~G~~-l~~~~~~~~~~~~l~~ai~~v 454 (506)
..+++ |+. .+|.+|+.|||++|||+|+++-.. --..-+..+.. +|+... +.. +.++..+...++
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA~------d~eeYv~~Av~L 585 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIAN------TVDEYVERAVRL 585 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEES------SHHHHHHHHHHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceecC------CHHHHHHHHHHH
Confidence 56665 553 378899999999999999987432 11122223334 477653 432 678888888888
Q ss_pred hCChHHHHHHH
Q 010617 455 LGNQDFKARAL 465 (506)
Q Consensus 455 l~d~~~r~~a~ 465 (506)
..|+..+++.+
T Consensus 586 a~D~~~l~~LR 596 (631)
T 3q3e_A 586 AENHQERLELR 596 (631)
T ss_dssp HHCHHHHHHHH
T ss_pred hCCHHHHHHHH
Confidence 88987655543
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.49 E-value=0.0018 Score=58.04 Aligned_cols=83 Identities=8% Similarity=-0.008 Sum_probs=61.4
Q ss_pred CeEE-Eeccchh---hhhcCCCcceEEecc---C-chhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCC
Q 010617 368 RGQM-ISWAPQL---RVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 439 (506)
Q Consensus 368 n~~v-~~~vpq~---~lL~h~~v~~~ItHg---G-~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~ 439 (506)
|+.+ .+++++. +++..+++ +|.-. | -.++.||+++|+|+|+.... .....+ .. +.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC---
Confidence 8999 8999865 57777776 66432 3 46899999999999987543 344455 42 67877754
Q ss_pred CCcCHHHHHHHHHHHhC-ChHHHHH
Q 010617 440 GIITREEIKNKVDQVLG-NQDFKAR 463 (506)
Q Consensus 440 ~~~~~~~l~~ai~~vl~-d~~~r~~ 463 (506)
-+.+++.++|.+++. |+..+++
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~ 187 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSK 187 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHH
Confidence 379999999999998 8765443
No 51
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.49 E-value=0.0011 Score=57.73 Aligned_cols=133 Identities=13% Similarity=0.253 Sum_probs=77.3
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhCC--CCEEEEEcCCCCCCCCCCCChhhH---HhhcCCeEEEeccchh---hhh
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELCK--RPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQMISWAPQL---RVL 381 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~lp~~~~---~~~~~n~~v~~~vpq~---~lL 381 (506)
+++++..|.... ...+..+++++.... .++-+.+.+. .+..+.+. ++..-++.+ +|+|+. +++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~------g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~ 72 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGK------GPDEKKIKLLAQKLGVKAEF-GFVNSNELLEIL 72 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECC------STTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeC------CccHHHHHHHHHHcCCeEEE-eecCHHHHHHHH
Confidence 477888887633 233556666665553 1333333222 11122222 233346777 999876 467
Q ss_pred cCCCcceEEe----ccCchhHHHHHHcCC-cEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhC
Q 010617 382 NHPSIACFLS----HCGWNSTMEGVSNGI-PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (506)
Q Consensus 382 ~h~~v~~~It----HgG~~sv~eal~~Gv-P~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~ 456 (506)
+.+++ +|. -|.-.++.||+++|+ |+|+....+ .....+.+. +. .+. .-+.+++.++|.+++.
T Consensus 73 ~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 73 KTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-----PNNAKDLSAKIDWWLE 139 (166)
T ss_dssp TTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC-----TTCHHHHHHHHHHHHH
T ss_pred HhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc-----CCCHHHHHHHHHHHHh
Confidence 67776 665 233469999999996 999833221 122222331 22 332 2479999999999999
Q ss_pred ChHHHHHH
Q 010617 457 NQDFKARA 464 (506)
Q Consensus 457 d~~~r~~a 464 (506)
|++.+++.
T Consensus 140 ~~~~~~~~ 147 (166)
T 3qhp_A 140 NKLERERM 147 (166)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 88654433
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.29 E-value=0.0047 Score=61.19 Aligned_cols=105 Identities=21% Similarity=0.175 Sum_probs=72.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHHhhhcCCCCCCCeE-EEecCCCCCCCCCccCH
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPDGMEPWEDRNDL 78 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~ 78 (506)
+.+|||++-..+.|++.-..++.++|.++ +.+|++++.+.+.+.++.. +.++ ++.++.. ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~~ 70 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------GR 70 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------SH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------cc
Confidence 45799999999999999999999999987 8999999998887766543 4553 4555421 00
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhcCCCCCc-cEEEecCCcchHHHHHHHcCCceEE
Q 010617 79 GKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAV 133 (506)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-DlvV~D~~~~~~~~~A~~lgIP~v~ 133 (506)
..-+. .+..++..++. .++ |++|.=....-...++...|+|..+
T Consensus 71 ~~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 HNSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00011 12334555555 689 9998654444556678888998655
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.15 E-value=0.063 Score=52.55 Aligned_cols=102 Identities=10% Similarity=0.046 Sum_probs=68.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHHhhhcCCCCCCCe-EEEecCCCCCCCCCccCHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQI-HLVSIPDGMEPWEDRNDLGK 80 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~ 80 (506)
||||++.....|++.-...+.++|.++ |.+|++++.+.+.+.++.. +.+ +++.++... . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~~--~--~~---- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLGH--G--AL---- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCCc--c--cc----
Confidence 589999988889999999999999987 8999999998777655433 345 344443210 0 00
Q ss_pred HHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCC-cchHHHHHHHcCCceEE
Q 010617 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IGWSMEIAKKMNVRGAV 133 (506)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~~~~~~A~~lgIP~v~ 133 (506)
....+.++...++. .+||++| |.. ..-+..++...|+|...
T Consensus 65 --------~~~~~~~l~~~l~~---~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 --------EIGERRKLGHSLRE---KRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred --------chHHHHHHHHHHHh---cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 11223455666665 7899998 433 23455677888999744
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.85 E-value=0.0015 Score=64.45 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=77.3
Q ss_pred CeEEEeccchhhhh---cCCCcceEEeccCc---------hhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEee
Q 010617 368 RGQMISWAPQLRVL---NHPSIACFLSHCGW---------NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 435 (506)
Q Consensus 368 n~~v~~~vpq~~lL---~h~~v~~~ItHgG~---------~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~ 435 (506)
|+.+.+|+|+.++. +.++.+++..-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 88999999998764 34445444422322 35789999999999865 44577778885 9999884
Q ss_pred cCCCCCcCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 010617 436 RDEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 492 (506)
Q Consensus 436 ~~~~~~~~~~~l~~ai~~vl~d~--~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 492 (506)
+.+++.+++.++..+. ++++++++.+++++. |--+.+.+.+.+..+
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 4788999999875432 678888888888876 444455555555443
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.79 E-value=0.2 Score=48.50 Aligned_cols=136 Identities=10% Similarity=-0.006 Sum_probs=76.7
Q ss_pred CCceEEEEeCcc---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEecc---chhhhh
Q 010617 308 PSSVVYVSFGSF---TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWA---PQLRVL 381 (506)
Q Consensus 308 ~~~vV~vs~GS~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~v---pq~~lL 381 (506)
+++.|.+..|+. ...+.+.+.++++.+.+.+.++++..++. .+.++-+.+.+.. .++.+.+-. .-.+++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~----~e~~~~~~i~~~~-~~~~l~g~~sl~el~ali 251 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP----HEEERAKRLAEGF-AYVEVLPKMSLEGVARVL 251 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH----HHHHHHHHHHTTC-TTEEECCCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH----HHHHHHHHHHhhC-CcccccCCCCHHHHHHHH
Confidence 356888888875 34577888899988876677776654322 0011111111111 233333322 234788
Q ss_pred cCCCcceEEeccCchhHHHHHHcCCcEEec--cCcccchhhHHhhhccceee-eEeec--CCCCCcCHHHHHHHHHHHhC
Q 010617 382 NHPSIACFLSHCGWNSTMEGVSNGIPFLCW--PYFGDQFLNERYICDFWKVG-LKFDR--DEGGIITREEIKNKVDQVLG 456 (506)
Q Consensus 382 ~h~~v~~~ItHgG~~sv~eal~~GvP~v~~--P~~~DQ~~na~rv~~~lG~G-~~l~~--~~~~~~~~~~l~~ai~~vl~ 456 (506)
+++++ +|+.- .|.++=|.+.|+|+|++ |..... ++- +|-. ..+.. .--..++++++.+++.++|.
T Consensus 252 ~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~P-----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 252 AGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IGG-----YGKNQMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp HTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HCC-----CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred HhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--cCC-----CCCCceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 78777 99982 34455577799999987 321111 110 1111 11110 00146899999999999997
Q ss_pred Ch
Q 010617 457 NQ 458 (506)
Q Consensus 457 d~ 458 (506)
+.
T Consensus 322 ~~ 323 (326)
T 2gt1_A 322 KA 323 (326)
T ss_dssp TC
T ss_pred Hh
Confidence 53
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.33 E-value=0.015 Score=58.96 Aligned_cols=85 Identities=11% Similarity=0.036 Sum_probs=57.4
Q ss_pred cCCeEEEeccchh---hhhcCCCcceEEecc---Cc-hhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCC
Q 010617 366 AARGQMISWAPQL---RVLNHPSIACFLSHC---GW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 438 (506)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~h~~v~~~ItHg---G~-~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~ 438 (506)
.+|+.+.+++|+. ++++.+++ ||.-. |. .++.||+++|+|+|+ -..+ ....+++. ..|..++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC--
Confidence 3578888999877 46667777 66422 33 578999999999998 3222 12334442 46777754
Q ss_pred CCCcCHHHHHHHHHHHhCChHHHHH
Q 010617 439 GGIITREEIKNKVDQVLGNQDFKAR 463 (506)
Q Consensus 439 ~~~~~~~~l~~ai~~vl~d~~~r~~ 463 (506)
-++++|+++|.+++.|+..+++
T Consensus 364 ---~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHH
Confidence 4799999999999988766655
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.58 E-value=0.15 Score=53.38 Aligned_cols=137 Identities=8% Similarity=0.066 Sum_probs=75.7
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchh---hhhcCCC
Q 010617 310 SVVYVSFGSFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPS 385 (506)
Q Consensus 310 ~vV~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~---~lL~h~~ 385 (506)
..+++..|.... -..+.+-..+..+.+.+.++++...++. .....-.....+.+.++.+....+.. .+++.++
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 403 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGAD 403 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCS
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhh
Confidence 356666776532 2233333333444455667766654430 00000111233456788888777664 4676777
Q ss_pred cceEEecc---Cc-hhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCC-C----CCcCHHHHHHHHHHHhC
Q 010617 386 IACFLSHC---GW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE-G----GIITREEIKNKVDQVLG 456 (506)
Q Consensus 386 v~~~ItHg---G~-~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~-~----~~~~~~~l~~ai~~vl~ 456 (506)
+ ||.-. |. .+++||+++|+|+|+-...+ ....|.+. ..|....... + ...++++|.++|++++.
T Consensus 404 ~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 404 V--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp E--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred e--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 6 66432 33 48999999999999866532 34444442 3444332210 0 12357889999988773
No 58
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=89.24 E-value=2.6 Score=37.43 Aligned_cols=98 Identities=11% Similarity=0.099 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc-----hhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-----HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-----~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (506)
+..|++.+..+.|-..-.+.+|-+.+.+|++|.|+..-.. ...+.+.+ ++.++....++.-. ..+
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------~v~~~~~g~gf~~~--~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------GVEFQVMATGFTWE--TQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------TCEEEECCTTCCCC--GGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------CcEEEEcccccccC--CCC
Confidence 4578888889999999999999999999999999954332 12222322 58888877654421 111
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc
Q 010617 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI 117 (506)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~ 117 (506)
..+ -.......+....+.+.+ .++|+||.|-..
T Consensus 98 ~~~----~~~~a~~~l~~a~~~l~~---~~yDlvILDEi~ 130 (196)
T 1g5t_A 98 REA----DTAACMAVWQHGKRMLAD---PLLDMVVLDELT 130 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHHTTC---TTCSEEEEETHH
T ss_pred cHH----HHHHHHHHHHHHHHHHhc---CCCCEEEEeCCC
Confidence 111 112224445555555555 789999999763
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=84.26 E-value=0.64 Score=48.56 Aligned_cols=39 Identities=26% Similarity=0.364 Sum_probs=28.7
Q ss_pred CCEEEEEcC---C---CccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPA---P---AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~---~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+|||||++. | +.|=-.-.-+|+++|+++||+|+++++.+
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 699999973 2 11212335688999999999999999754
No 60
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=82.52 E-value=1.9 Score=35.90 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=39.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHH
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 47 (506)
|++.+|++.+.++-.|-....-++..|..+|++|.+.......+.+.
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v 47 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFI 47 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 78889999998999999999999999999999999886654444433
No 61
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=79.78 E-value=3.9 Score=37.72 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=28.7
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 010617 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVN 38 (506)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 38 (506)
.++.+|++.. .-|-..-...|++.|.++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 3566655533 44899999999999999999999985
No 62
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=79.71 E-value=12 Score=32.70 Aligned_cols=82 Identities=17% Similarity=0.271 Sum_probs=51.6
Q ss_pred CEEE-EE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHH
Q 010617 4 PRVL-VM-PAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (506)
Q Consensus 4 ~~il-~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (506)
|+++ |+ +-++-|-..-...||..|+++|++|.++-.+.... ....... ...++.+...+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~-~~~~~~~---~~~~~~~~~~~~-------------- 62 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMS-LTNWSKA---GKAAFDVFTAAS-------------- 62 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHTT---SCCSSEEEECCS--------------
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCC-HHHHHhc---CCCCCcEEecCc--------------
Confidence 3455 44 34566999999999999999999999997754332 2222110 112344443321
Q ss_pred HHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCC
Q 010617 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN 116 (506)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~ 116 (506)
..+.++++.+. .++|+||.|.-
T Consensus 63 ---------~~l~~~l~~l~----~~yD~viiD~~ 84 (206)
T 4dzz_A 63 ---------EKDVYGIRKDL----ADYDFAIVDGA 84 (206)
T ss_dssp ---------HHHHHTHHHHT----TTSSEEEEECC
T ss_pred ---------HHHHHHHHHhc----CCCCEEEEECC
Confidence 33556666665 46999999974
No 63
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=79.64 E-value=4.9 Score=37.15 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=62.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (506)
||||+.==-+. |---+.+|+++|.+.| +|+++.+...+....... .....+++..+..... ..-...+.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----t~~~pl~~~~~~~~~~-~~v~GTPaDCV~ 74 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY-TVIDGTPADCVH 74 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE-EETTCCHHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce----ecCCCeEEEEecCCCe-EEECCCHHHHHH
Confidence 67776652222 4456788999999988 999999987776554332 1223455544432210 100111111111
Q ss_pred HHHHhCcHHHHHHHHHHhcCCCCCccEEEecC----------Ccc---hHHHHHHHcCCceEEEcc
Q 010617 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADG----------NIG---WSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~----------~~~---~~~~~A~~lgIP~v~~~~ 136 (506)
. .+..++. + .+||+||+-. +.. ++..-|..+|||.+.++-
T Consensus 75 l-------al~~l~~---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 75 L-------GYRVILE---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp H-------HHHTTTT---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred H-------HHHHhcC---C---CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 1 1222222 1 5799999742 222 355667778999999864
No 64
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=79.53 E-value=5.9 Score=36.65 Aligned_cols=121 Identities=13% Similarity=0.167 Sum_probs=66.3
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeC---C-----cchhHHHHhhhcCCCCCCCeEEEecCCCCCCC
Q 010617 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNT---D-----YNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW 72 (506)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~---~-----~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~ 72 (506)
+++.+|++.. .-|-..-...|++.|.++|++|.++=+ . .....++... . .......+.+.....+.
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~-g---~~~~~~~~~~~~p~sP~ 100 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA-G---VTQLAGLARYPQPMAPA 100 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH-C---CCEEEEEEECSSSSCHH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc-C---CCCCCCCeeECCCCChH
Confidence 4566665533 348999999999999999999999853 1 1112222221 0 00011122222111111
Q ss_pred CCccCHHHHHHHHHHh---CcHHHHHHHHHHhcCCCCCccEEEecCCc----------chHHHHHHHcCCceEEEccchH
Q 010617 73 EDRNDLGKLIEKCLQV---MPGKLEELIEEINSREDEKIDCFIADGNI----------GWSMEIAKKMNVRGAVFWPSSA 139 (506)
Q Consensus 73 ~~~~~~~~~~~~~~~~---~~~~~~~ll~~l~~~~~~~~DlvV~D~~~----------~~~~~~A~~lgIP~v~~~~~~~ 139 (506)
........ ..+.+.+.++++. .++|+||+|..- ....++|+.++.|++.+.....
T Consensus 101 --------~aa~~~~~~~~~~~~i~~~~~~l~----~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~ 168 (251)
T 3fgn_A 101 --------AAAEHAGMALPARDQIVRLIADLD----RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADL 168 (251)
T ss_dssp --------HHHHHTTCCCCCHHHHHHHHHTTC----CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSST
T ss_pred --------HHHHHcCCCCCCHHHHHHHHHHHH----hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCC
Confidence 00011001 1223444444432 578999998731 3467899999999999877643
No 65
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=78.83 E-value=9.1 Score=36.97 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|.++||+|+- --+....+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 5579999982 223444567899999999887765
No 66
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=77.57 E-value=5.7 Score=36.12 Aligned_cols=36 Identities=3% Similarity=0.063 Sum_probs=29.7
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 010617 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVN 38 (506)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 38 (506)
+|+.+|++.. .-|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 6676766543 44999999999999999999999984
No 67
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=77.49 E-value=8.7 Score=39.38 Aligned_cols=109 Identities=11% Similarity=0.004 Sum_probs=70.9
Q ss_pred CeEEEeccchh---hhhcCCCcceEEe---ccCch-hHHHHHHcC---CcEEeccCcccchhhHHhhhccceeeeEeecC
Q 010617 368 RGQMISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNG---IPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 437 (506)
Q Consensus 368 n~~v~~~vpq~---~lL~h~~v~~~It---HgG~~-sv~eal~~G---vP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~ 437 (506)
.+.+...+|+. +++..++| |+. .=|+| +..||+++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 56777888875 45556776 553 35786 568999986 6665544333 222221 24777765
Q ss_pred CCCCcCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 438 EGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 438 ~~~~~~~~~l~~ai~~vl~d~--~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
.+.++++++|.++|.++ +-+++.+++.+.+++ -....-.+.|++.|...
T Consensus 423 ----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 57999999999999865 445555666666554 34566677777777654
No 68
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=77.06 E-value=16 Score=31.05 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=64.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (506)
+.+|++.+.++-.|-....-++..|..+|++|.+.......+.+.+.... .+...+-+.......
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~-----~~~diV~lS~~~~~~---------- 82 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ-----EDVDVIGVSILNGAH---------- 82 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH-----TTCSEEEEEESSSCH----------
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh-----cCCCEEEEEeechhh----------
Confidence 57899988899999999999999999999999998765444433333211 133333332211111
Q ss_pred HHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEE
Q 010617 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (506)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~ 133 (506)
...+.++++.++..+....-++|.-.....-...++..|+-.+.
T Consensus 83 -------~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 83 -------LHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp -------HHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred -------HHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 12234445555542212344666654433344457788987443
No 69
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.48 E-value=14 Score=39.30 Aligned_cols=47 Identities=17% Similarity=0.182 Sum_probs=33.6
Q ss_pred CCeEEE---eccchh---------hhhcCCCcceEEec---cCc-hhHHHHHHcCCcEEeccCcc
Q 010617 367 ARGQMI---SWAPQL---------RVLNHPSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFG 415 (506)
Q Consensus 367 ~n~~v~---~~vpq~---------~lL~h~~v~~~ItH---gG~-~sv~eal~~GvP~v~~P~~~ 415 (506)
++|+++ .|++.. ++++.+++ ||.- =|+ .+++||+++|+|+|+.-..+
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 566643 788764 47777777 6643 344 58999999999999866543
No 70
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=76.12 E-value=16 Score=34.07 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=31.3
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
++++++++ -|+-|-..-...||..|+++|.+|.++-.+.
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45666444 3577999999999999999999999996653
No 71
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=75.03 E-value=15 Score=35.37 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=33.2
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010617 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (506)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 43 (506)
.+|+|++ -|+.|-..-..++|..|+++|++|.++..+...
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 4666655 556699999999999999999999999988544
No 72
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=74.61 E-value=3.5 Score=37.01 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=38.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
|+ +.||++.-.|+.|-.. ...|.+.|.++|++|.++.++.....+...
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 66 5688876667766665 899999999999999999998777776553
No 73
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=74.45 E-value=1.6 Score=43.88 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=29.7
Q ss_pred CCEEEEEcCC---C--ccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAP---A--QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~---~--~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
++||++++.. . .|=......+|++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 6899976632 1 1333568899999999999999999864
No 74
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=74.15 E-value=13 Score=32.79 Aligned_cols=46 Identities=15% Similarity=0.227 Sum_probs=36.8
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHH
Q 010617 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAAS 141 (506)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 141 (506)
...++..+++++. .+.|+||.| ..+..+|+++|+|.+.+.++..+.
T Consensus 128 ~~e~~~~i~~l~~---~G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 128 EDEITTLISKVKT---ENIKIVVSG---KTVTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp GGGHHHHHHHHHH---TTCCEEEEC---HHHHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHHHHHH---CCCeEEECC---HHHHHHHHHcCCcEEEEecCHHHH
Confidence 4566778888887 789999999 456889999999999988755543
No 75
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=72.47 E-value=18 Score=34.59 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+++||+|+-.+.. .....++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 56899999876533 345567888899999887764
No 76
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=72.01 E-value=4.1 Score=37.78 Aligned_cols=100 Identities=17% Similarity=0.157 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHH
Q 010617 18 IPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELI 97 (506)
Q Consensus 18 ~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 97 (506)
--+..|+++|.+.| +|+++.+...+..+.... .....+++........ ..-...+...... .+..++
T Consensus 15 pGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~~-~~v~GTPaDCV~l-------al~~~l 81 (251)
T 2wqk_A 15 PGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY-TVIDGTPADCVHL-------GYRVIL 81 (251)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE-EETTCCHHHHHHH-------HHHTTT
T ss_pred HHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccce-eecCCChHHHHhh-------hhhhhc
Confidence 34678899998888 599998877765543321 1222344444322100 0000111111100 112222
Q ss_pred HHHhcCCCCCccEEEe----------cCCcc---hHHHHHHHcCCceEEEcc
Q 010617 98 EEINSREDEKIDCFIA----------DGNIG---WSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 98 ~~l~~~~~~~~DlvV~----------D~~~~---~~~~~A~~lgIP~v~~~~ 136 (506)
. + .+||+||+ |.+.. +|+.-|..+|||.+.++-
T Consensus 82 ~---~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 82 E---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp T---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred C---C---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 2 2 68999998 33222 456667788999999873
No 77
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=71.77 E-value=14 Score=34.85 Aligned_cols=40 Identities=20% Similarity=0.404 Sum_probs=31.3
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 3 RPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 3 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
+.++++++ -|+-|-..-...||..|+++|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 34555433 45679999999999999999999999976543
No 78
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=71.71 E-value=18 Score=36.84 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=67.7
Q ss_pred eEE-Eeccchhh---hhcCCCcceEEe---ccCc-hhHHHHHHcCC-----cEEeccCcccchhhHHhhhccceeeeEee
Q 010617 369 GQM-ISWAPQLR---VLNHPSIACFLS---HCGW-NSTMEGVSNGI-----PFLCWPYFGDQFLNERYICDFWKVGLKFD 435 (506)
Q Consensus 369 ~~v-~~~vpq~~---lL~h~~v~~~It---HgG~-~sv~eal~~Gv-----P~v~~P~~~DQ~~na~rv~~~lG~G~~l~ 435 (506)
+.+ .+++++.+ +++.+++ ||. .=|+ .++.||+++|+ |+|+--+.+ .+..+ .-|..++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 554 47888775 5666777 664 3355 48999999998 666554332 11111 2356665
Q ss_pred cCCCCCcCHHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 436 RDEGGIITREEIKNKVDQVLGNQ-D-FKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 436 ~~~~~~~~~~~l~~ai~~vl~d~-~-~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
+ .+.++++++|.++|.++ . -++..+++.+.+++ -+...-.+++++.+.+.
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 4 47999999999999854 3 33444444444443 25566777777777655
No 79
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=71.65 E-value=19 Score=34.00 Aligned_cols=39 Identities=18% Similarity=0.434 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
++++++++ -|+-|-..-...||..|+++|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34555443 3577999999999999999999999997654
No 80
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=71.52 E-value=7.8 Score=38.18 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=30.2
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPA-PAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
++|++++. ++.|-..-...+|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 46776654 4559999999999999999999999988
No 81
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=71.17 E-value=16 Score=33.17 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=26.9
Q ss_pred CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 11 APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 11 ~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
-++.|-..-...||..|+++|++|.++=.+.
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 11 KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4566999999999999999999999986654
No 82
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=70.15 E-value=14 Score=36.01 Aligned_cols=40 Identities=13% Similarity=0.093 Sum_probs=33.2
Q ss_pred CCEEEEEc-CCCccCHHHHHHHHHHHH--hCCCeEEEEeCCcc
Q 010617 3 RPRVLVMP-APAQGHVIPLLEFSQCLA--KHGFRVTFVNTDYN 42 (506)
Q Consensus 3 ~~~il~~~-~~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~~ 42 (506)
+++|+|++ -|+.|-..-...+|..|+ ++|++|.++..+..
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 35677655 566699999999999999 89999999999853
No 83
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=69.15 E-value=19 Score=35.35 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+.++||++-.+.. .+.+++++.+.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 45678998876543 3668999999999999997643
No 84
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=66.96 E-value=31 Score=30.86 Aligned_cols=103 Identities=11% Similarity=0.110 Sum_probs=56.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCc-ch---hHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGF--RVTFVNTDY-NH---KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (506)
+||+|+..+..+ -+.++.++|.+.+| +|..+.+.. .. +..++. |+.+..++..-- .+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~-----~~ 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQRKEF-----PS 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCGGGS-----SS
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCcccc-----cc
Confidence 478877655443 46677788888888 776665432 22 223333 676665442100 01
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc-chHHHHHHHcCCceEEEccc
Q 010617 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI-GWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~-~~~~~~A~~lgIP~v~~~~~ 137 (506)
.+...+.+.+.+++ .++|++|+=.+. .....+-+.....++-++++
T Consensus 65 --------r~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 --------KKEFEERMALELKK------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --------HHHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --------hhhhhHHHHHHHHh------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 01111223334444 799999987653 34445555555667776655
No 85
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=66.79 E-value=17 Score=35.19 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=35.2
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhh
Q 010617 5 RVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESL 50 (506)
Q Consensus 5 ~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~ 50 (506)
+|+|++ -|+.|-..-..+||..|+++|++|.++..+. ...+...+
T Consensus 27 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~l 72 (349)
T 3ug7_A 27 KYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDIF 72 (349)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHHH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHHh
Confidence 455544 5666999999999999999999999999987 34555544
No 86
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=66.10 E-value=63 Score=27.63 Aligned_cols=145 Identities=17% Similarity=0.127 Sum_probs=83.3
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
||.|-|-+||.. +.+.+++....|+..+..+-..+..- ...|+.+. .|+.+. ....+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~----------~~~~~a---~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMF----------EYAETA---RERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHHT---TTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHH----------HHHHHH---HhCCCcE
Confidence 667888888743 67888999999999998876655433 55665532 111111 0111334
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCcccc--hhhHH-hhhc--cceeee-EeecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQ--FLNER-YICD--FWKVGL-KFDRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ--~~na~-rv~~--~lG~G~-~l~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
+|.=.|. .++..++ --+|++.+|..... -..+. -+.. . |+.+ .+..++.+-.++.-++..|. -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 7776664 3444444 36899999975421 11111 1222 2 5543 22221002245556665554 45689
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 010617 459 DFKARALELKEKAMSSVRE 477 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~ 477 (506)
.++++.+..+++.++.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999888875443
No 87
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=65.97 E-value=29 Score=29.99 Aligned_cols=134 Identities=11% Similarity=0.013 Sum_probs=68.8
Q ss_pred chhhhhhhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccc
Q 010617 297 SNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAP 376 (506)
Q Consensus 297 ~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vp 376 (506)
.++-.+|.++. ..+||-|.. ...+....++....+-+++-+++.. ..+.+.... ....+++..+
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~----~Gim~aa~~gAl~~gG~tigVlP~~-----~~~~~~~~~----~~~i~~~~~~ 98 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRS----LGVMHEAMKGAKEAGGTTIGVLPGP-----DTSEISDAV----DIPIVTGLGS 98 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSS----SSHHHHHHHHHHHTTCCEEEEECC----------CCTTC----SEEEECCCCS
T ss_pred HHHHHHHHHCC---CEEEECCCc----cCHhHHHHHHHHHcCCEEEEEeCch-----hhhhhccCC----ceeEEcCCHH
Confidence 33445565543 677766641 2345556666656677777666432 111221110 1123444444
Q ss_pred hh-hhhcCCCcceEEeccCchhHHH---HHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHH
Q 010617 377 QL-RVLNHPSIACFLSHCGWNSTME---GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 452 (506)
Q Consensus 377 q~-~lL~h~~v~~~ItHgG~~sv~e---al~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~ 452 (506)
.. .++..-+-..++--||.||+-| ++.+++|++++|.+. .....+... ....... .-+++++.+.+.
T Consensus 99 ~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~-----~~~~~e~~~~l~ 169 (176)
T 2iz6_A 99 ARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV-----AADVAGAIAAVK 169 (176)
T ss_dssp SSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE-----ESSHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE-----cCCHHHHHHHHH
Confidence 33 4444333345667789987655 577999999999832 111112221 1111111 126788887777
Q ss_pred HHh
Q 010617 453 QVL 455 (506)
Q Consensus 453 ~vl 455 (506)
+.+
T Consensus 170 ~~~ 172 (176)
T 2iz6_A 170 QLL 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 88
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=65.10 E-value=9.1 Score=37.11 Aligned_cols=43 Identities=9% Similarity=0.194 Sum_probs=36.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 6 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
+++...|+.|-..-++.+|..++..|..|.|++.+...+.+..
T Consensus 49 iiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql~~ 91 (338)
T 4a1f_A 49 VIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQLAL 91 (338)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHHHH
Confidence 5577788999999999999999999999999999877655543
No 89
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=64.54 E-value=61 Score=29.26 Aligned_cols=103 Identities=15% Similarity=0.063 Sum_probs=57.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcc-h---hHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYN-H---KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~-~---~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (506)
+||+|+..+..+ -+.++.++|.+. +++|..+.+... . +..++ .++.+..++..-- .+
T Consensus 23 ~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~---------~gIp~~~~~~~~~-----~~ 85 (229)
T 3auf_A 23 IRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARR---------AGVDALHMDPAAY-----PS 85 (229)
T ss_dssp EEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHH---------TTCEEEECCGGGS-----SS
T ss_pred cEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHH---------cCCCEEEECcccc-----cc
Confidence 588888655543 366777888776 678876655422 2 22222 2787776542110 00
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCC-cchHHHHHHHcCCceEEEccc
Q 010617 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IGWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~~~~~~A~~lgIP~v~~~~~ 137 (506)
. +...+.+.+.+++ .+||+||+=.+ ......+-..+...++-+.++
T Consensus 86 -r-------~~~~~~~~~~l~~------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 -R-------TAFDAALAERLQA------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -H-------HHHHHHHHHHHHH------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -h-------hhccHHHHHHHHh------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 1111223334444 79999998765 334555666666677776655
No 90
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=63.81 E-value=8 Score=33.62 Aligned_cols=43 Identities=12% Similarity=0.090 Sum_probs=33.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 47 (506)
.||++.-.++.|=. -...+.+.|.++|++|.++.++...+.+.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 47776665665544 48899999999999999999987766553
No 91
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=62.80 E-value=6.8 Score=32.76 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=28.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|.+.||+++- .|++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 7888898883 35554 68899999999999999874
No 92
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=62.50 E-value=15 Score=35.22 Aligned_cols=44 Identities=14% Similarity=0.173 Sum_probs=34.4
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 5 RVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 5 ~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
+|+|++ -|+-|-..-..+||..|+++|++|.++..+. ...+...
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 59 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP-AHSLSDS 59 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS-SCCHHHH
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC-CcCHHHH
Confidence 455544 5667999999999999999999999999887 3344443
No 93
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=62.35 E-value=11 Score=35.46 Aligned_cols=38 Identities=16% Similarity=0.172 Sum_probs=25.6
Q ss_pred CCCCEEE-EEcCCCccCHHHH--HHHHHHHHhCCCeEEEEe
Q 010617 1 MSRPRVL-VMPAPAQGHVIPL--LEFSQCLAKHGFRVTFVN 38 (506)
Q Consensus 1 m~~~~il-~~~~~~~GH~~p~--l~La~~L~~rGh~Vt~~~ 38 (506)
|++|||| +...|-...++-. -.+.+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 6789999 4566765544432 346778888999999873
No 94
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=61.84 E-value=63 Score=28.75 Aligned_cols=107 Identities=12% Similarity=0.117 Sum_probs=56.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (506)
+||.++-.+..+ -+.++.++|.+. +|+|..+.+......+.+.-. ..|+.+..++..-- .+-
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~-----~~gIp~~~~~~~~~-----~~~--- 67 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAA-----RENVPAFVFSPKDY-----PSK--- 67 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHH-----HTTCCEEECCGGGS-----SSH---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHH-----HcCCCEEEeCcccc-----cch---
Confidence 367766655533 366677788776 689877765432211111110 02676665442100 010
Q ss_pred HHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc-chHHHHHHHcCCceEEEccc
Q 010617 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI-GWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~-~~~~~~A~~lgIP~v~~~~~ 137 (506)
+...+.+.+.+++ .+||++|+=.+. .....+-+.+.-.++-++++
T Consensus 68 -----~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 -----AAFESEILRELKG------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -----HHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -----hhhHHHHHHHHHh------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 1111223333444 899999987653 34555666666677776655
No 95
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=61.07 E-value=7.7 Score=34.56 Aligned_cols=43 Identities=16% Similarity=-0.023 Sum_probs=34.4
Q ss_pred CCEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 010617 3 RPRVLVMPAPAQGHVI-PLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~v 46 (506)
..||++.-.|+ +..+ -...+.+.|.++|++|.++.++...+.+
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 56888776666 5555 7899999999999999999987666544
No 96
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=60.66 E-value=14 Score=33.89 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=22.5
Q ss_pred CCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|++.+|| |.|.|-.== .-+-.....|+++|++|++++-
T Consensus 1 ~~~~~vL~v~aHPDDe~-l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 1 MSGLHILAFGAHADDVE-IGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp -CCCSEEEEESSTTHHH-HHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCccEEEEEeCCChHH-HhHHHHHHHHHHCCCeEEEEEE
Confidence 7777787 555554322 2333344566678999888743
No 97
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=60.65 E-value=13 Score=33.07 Aligned_cols=47 Identities=19% Similarity=0.187 Sum_probs=39.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
+.+|++.+.++..|-....-++..|..+|++|.++...-..+.+.+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 45899999999999999999999999999999998876555554433
No 98
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=60.27 E-value=30 Score=31.75 Aligned_cols=113 Identities=10% Similarity=0.079 Sum_probs=60.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCC--CCCCccCHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME--PWEDRNDLGKL 81 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~ 81 (506)
||||+.==-+. |---+..|+++|.+.| +|+++.+...+..+.... .....+++..++.+.. ...-...+...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~v~GTPaDC 74 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI----TIHVPLWMKKVFISERVVAYSTTGTPADC 74 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCCEEECCCSSSEEEEEESSCHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCCceEEECCcHHHH
Confidence 35555442221 3344788999998888 899999988776554432 1222355555433200 00000111111
Q ss_pred HHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecC----------Cc---chHHHHHHHcCCceEEEcc
Q 010617 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADG----------NI---GWSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~----------~~---~~~~~~A~~lgIP~v~~~~ 136 (506)
+.--+..+-. .+||+||+-. +. .++..-|..+|||.+.++-
T Consensus 75 -----------V~lal~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 75 -----------VKLAYNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp -----------HHHHHHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -----------HHHHHHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1111222222 6899999642 21 2355666778999999865
No 99
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=60.14 E-value=80 Score=26.86 Aligned_cols=144 Identities=15% Similarity=0.105 Sum_probs=81.2
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceE
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ 389 (506)
|.|-|-+||. .+.+..++....++..+..+-+.+..- ...|+.+. .|+.. +....+++|
T Consensus 6 p~V~IimgS~--SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSK--SDWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 4566777763 367888999999999998765555432 45565533 22211 111223448
Q ss_pred EeccCc----hhHHHHHHcCCcEEeccCcccc------hhhHHhhhccceeeeEe-ecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 390 LSHCGW----NSTMEGVSNGIPFLCWPYFGDQ------FLNERYICDFWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 390 ItHgG~----~sv~eal~~GvP~v~~P~~~DQ------~~na~rv~~~lG~G~~l-~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
|.=.|. .++..++ --+|++.+|..... ..---.+.. |+++.. ..++.+-+++.-++..|.. +.|+
T Consensus 65 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAALFAASILQ-HTDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHHG-GGCH
T ss_pred EEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHHHHHHHHHc-CCCH
Confidence 877774 3444443 36899999985321 111112332 444332 2210012344455544443 3589
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 010617 459 DFKARALELKEKAMSSVREG 478 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~g 478 (506)
.++++.+..+++.++.+.+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 141 NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999998888754443
No 100
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=59.87 E-value=33 Score=34.49 Aligned_cols=41 Identities=17% Similarity=0.335 Sum_probs=34.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhH
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR 45 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 45 (506)
.|+++-.++.|-..-+..||..|+++|++|.++..+.+...
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a 142 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG 142 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh
Confidence 45566677889999999999999999999999998766543
No 101
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=59.23 E-value=30 Score=30.91 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCc-ch---hHHHHhhhcCCCCCCCeEEEecCCCCCCCCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDY-NH---KRVVESLQGKNYLGEQIHLVSIPDGMEPWED 74 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 74 (506)
|+|.||.++..+..+. +.+|.+++.+.+ ++|..+.+.. .. +..++. |+.+..++...-
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------gIp~~~~~~~~~---- 68 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------GIATQVFKRKDF---- 68 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCGGGS----
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------CCCEEEeCcccc----
Confidence 7888998776555444 445556665543 6888776532 22 223333 676666542110
Q ss_pred ccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcc-hHHHHHHHcCCceEEEccc
Q 010617 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgIP~v~~~~~ 137 (506)
.+ . ....+.+.+.+++ .++|++|+=.+.- -...+-+.+.-.++-++++
T Consensus 69 -~~-r-------~~~d~~~~~~l~~------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 69 -AS-K-------EAHEDAILAALDV------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -SS-H-------HHHHHHHHHHHHH------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -CC-H-------HHHHHHHHHHHHh------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 00 0 1111233344444 7899999876533 4445555555566666554
No 102
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=58.94 E-value=22 Score=35.86 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=36.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHH
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 47 (506)
-+++...|+.|-..-++.+|...+.+|..|.+++.+...+.+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 3567778999999999999999999999999999987665444
No 103
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=58.69 E-value=37 Score=31.06 Aligned_cols=111 Identities=12% Similarity=0.121 Sum_probs=61.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCC--C---CCCccCH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME--P---WEDRNDL 78 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~--~---~~~~~~~ 78 (506)
||||+.==-+. |---+..|+++|.+.| +|+++.+...+..+.... .....+++..++.+.+ . ..-...+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~~~~v~GTP 74 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI----TIAHPVRAYPHPSPLHAPHFPAYRVRGTP 74 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC----CCSSCBEEEECCCCTTSCCCCEEEEESCH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCcCCCCCceEEEcCcH
Confidence 35655442222 3344788999998888 899999987765543332 2234566766643211 0 0001111
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecC----------Cc---chHHHHHHHcCCceEEEcc
Q 010617 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADG----------NI---GWSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~----------~~---~~~~~~A~~lgIP~v~~~~ 136 (506)
......- +. + . .+||+||+-. +. .++..-|..+|||.+.++-
T Consensus 75 aDCV~la-------l~-----l-~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 75 ADCVALG-------LH-----L-F---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHH-------HH-----H-S---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHH-------Hc-----C-C---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 1111111 11 2 2 6899999632 21 2355666778999999864
No 104
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=58.66 E-value=34 Score=32.00 Aligned_cols=112 Identities=11% Similarity=0.018 Sum_probs=59.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCC-CCCCCCccCHHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-MEPWEDRNDLGKLI 82 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~ 82 (506)
||||+.==-+. +---+..|+++|.+.| +|+++.+...+..+.... .....+++..++.+ .....-...+..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si----Tl~~pl~~~~~~~~~~~~~~v~GTPaD-- 72 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI----TLHKPLRMYEVDLCGFRAIATSGTPSD-- 72 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC----CCSSCBCEEEEECSSSEEEEESSCHHH--
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCceEEECCcHHH--
Confidence 35555442221 3344788999999888 999999987776554332 12223444444221 000000011111
Q ss_pred HHHHHhCcHHHHHHHHHHhcCCCCCccEEEecC-----------Cc---chHHHHHHHcCCceEEEcc
Q 010617 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADG-----------NI---GWSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-----------~~---~~~~~~A~~lgIP~v~~~~ 136 (506)
++.--+..+ . .+||+||+-. +. .++..-|..+|||.+.++-
T Consensus 73 ---------CV~lal~~l-~---~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 73 ---------TVYLATFGL-G---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp ---------HHHHHHHHH-T---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---------HHHHHHhcC-C---CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 111122333 3 6899999632 21 2355556778999999875
No 105
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=57.78 E-value=45 Score=35.81 Aligned_cols=107 Identities=7% Similarity=0.059 Sum_probs=71.0
Q ss_pred eccchhhhhcCCCcceEEeccCchhHHHHHHcCCcEEeccCcccchhhHHhhhccceeeeEeecCC----CCCcCHHHHH
Q 010617 373 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE----GGIITREEIK 448 (506)
Q Consensus 373 ~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~----~~~~~~~~l~ 448 (506)
++.+-.++|..+++ +||=- ...+.|.+..++|++....-.|++.+. .+ | ...+..+ .-..+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-G--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-S--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-C--cccChhHhCCCCeECCHHHHH
Confidence 56677789977777 99973 568899999999999987777765431 11 2 2322210 1234789999
Q ss_pred HHHHHHhC-ChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHH
Q 010617 449 NKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQW 491 (506)
Q Consensus 449 ~ai~~vl~-d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 491 (506)
++|..... +..|+++.++..+++-.. +.|.+.+.+.+.|-.
T Consensus 675 ~~i~~~~~~~~~~~~~~~~~~~~~~~~--~dg~as~ri~~~i~~ 716 (729)
T 3l7i_A 675 KELKNLDKVQQQYQEKIDAFYDRFCSV--DNGKASQYIGDLIHK 716 (729)
T ss_dssp HHHTTHHHHHHHTHHHHHHHHHHHSTT--CCSCHHHHHHHHHHH
T ss_pred HHHhhhhccchhHHHHHHHHHHHhCCc--cCChHHHHHHHHHHh
Confidence 99998875 357888888888887653 455554444444433
No 106
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=57.43 E-value=41 Score=32.14 Aligned_cols=46 Identities=11% Similarity=0.149 Sum_probs=35.2
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhh
Q 010617 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESL 50 (506)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~ 50 (506)
.+|+|++ -|+-|-..-...||..|+++|++|.++..+.. ..+...+
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~-~~l~~~l 65 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA-HNLSDAF 65 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT-CHHHHHH
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC-cCHHHHh
Confidence 3455544 55669999999999999999999999988765 4444443
No 107
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=56.47 E-value=42 Score=30.03 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=56.1
Q ss_pred CC--CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcc-h---hHHHHhhhcCCCCCCCeEEEecCCCCCCCC
Q 010617 1 MS--RPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYN-H---KRVVESLQGKNYLGEQIHLVSIPDGMEPWE 73 (506)
Q Consensus 1 m~--~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~-~---~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~ 73 (506)
|+ ++||+++..+..+.+..+ .++..+ .+++|..+.+... . +..++. |+.+..++..--+.
T Consensus 1 ~~~~~~riavl~SG~Gsnl~al---l~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~---------gIp~~~~~~~~~~~- 67 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQAI---IGAIQKGLAIEIRAVISNRADAYGLKRAQQA---------DIPTHIIPHEEFPS- 67 (215)
T ss_dssp ---CCEEEEEEESSCCHHHHHH---HHHHHTTCSEEEEEEEESCTTCHHHHHHHHT---------TCCEEECCGGGSSS-
T ss_pred CCCCCcEEEEEEeCCcHHHHHH---HHHHHcCCCCEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccccCc-
Confidence 55 678987776655544444 444433 3688887766432 2 223332 67776654211000
Q ss_pred CccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc-chHHHHHHHcCCceEEEccc
Q 010617 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI-GWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~-~~~~~~A~~lgIP~v~~~~~ 137 (506)
. ....+ ++++.++. .++|++|+=.+. .-...+-+...-.++-++++
T Consensus 68 -----r-------~~~d~---~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -----R-------TDFES---TLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -----H-------HHHHH---HHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----h-------hHhHH---HHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0 01112 33444444 899999987653 34555666666667776655
No 108
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=56.00 E-value=16 Score=32.06 Aligned_cols=44 Identities=23% Similarity=0.257 Sum_probs=35.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
.||++.-.|+.| ..=...+.+.|.++|++|.++.++...+.+..
T Consensus 2 k~IllgvTGs~a-a~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASG-VIYGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTT-HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 378877767777 44678999999999999999999887777765
No 109
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=55.82 E-value=17 Score=33.70 Aligned_cols=44 Identities=20% Similarity=0.188 Sum_probs=37.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 46 (506)
+.+|++.+.++..|-....-++..|..+|++|.++...-..+.+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56899999999999999999999999999999988765443333
No 110
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=55.78 E-value=13 Score=33.38 Aligned_cols=45 Identities=18% Similarity=0.300 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
++.||++.-.++.+-.. ...+.+.|.++| +|.++.++...+.+..
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCH
Confidence 35688887778777665 899999999999 9999999877766544
No 111
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=55.38 E-value=11 Score=33.39 Aligned_cols=45 Identities=13% Similarity=0.173 Sum_probs=35.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhHHHHh
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v~~~ 49 (506)
+||++.-.|+.|-.. ...+.+.|.++ |++|.++.++...+.+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 478876666665554 89999999999 9999999998777766643
No 112
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=55.12 E-value=12 Score=33.55 Aligned_cols=44 Identities=11% Similarity=-0.045 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCcchhHH
Q 010617 2 SRPRVLVMPAPAQGHVIP-LLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~v 46 (506)
+..||++.-.|+ +..+- ...+.+.|.++|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 356788766565 45665 889999999999999999997766433
No 113
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=54.37 E-value=1.2e+02 Score=27.13 Aligned_cols=143 Identities=10% Similarity=0.006 Sum_probs=75.0
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhh-cCCeEEEeccchhhhhcCCCc
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV-AARGQMISWAPQLRVLNHPSI 386 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~~vpq~~lL~h~~v 386 (506)
++.+++|..|.+ -...+..|...|..+.++-... .+.+.+-. ..++.+..---+.+.|...++
T Consensus 31 gk~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~~---------~~~l~~l~~~~~i~~i~~~~~~~dL~~adL 94 (223)
T 3dfz_A 31 GRSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPTV---------SAEINEWEAKGQLRVKRKKVGEEDLLNVFF 94 (223)
T ss_dssp TCCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSSC---------CHHHHHHHHTTSCEEECSCCCGGGSSSCSE
T ss_pred CCEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCCC---------CHHHHHHHHcCCcEEEECCCCHhHhCCCCE
Confidence 366899887743 3455667777788876654321 12222211 134544422223344544444
Q ss_pred ceEEeccCchhHHHHHHc----CCcEEeccCcccchhhH-----HhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 387 ACFLSHCGWNSTMEGVSN----GIPFLCWPYFGDQFLNE-----RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 387 ~~~ItHgG~~sv~eal~~----GvP~v~~P~~~DQ~~na-----~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
+|..-|.-.+.+.++. |+|+-+ .|.+..+ ..+.+. ++-+.+..++..-.-+..|++.|.+.+..
T Consensus 95 --VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~ 167 (223)
T 3dfz_A 95 --IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDE 167 (223)
T ss_dssp --EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCT
T ss_pred --EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccH
Confidence 8888887666666554 566532 2333222 222332 44444444332333457788888888854
Q ss_pred h--HHHHHHHHHHHHHHh
Q 010617 458 Q--DFKARALELKEKAMS 473 (506)
Q Consensus 458 ~--~~r~~a~~l~~~~~~ 473 (506)
. .+-+.+.++++++++
T Consensus 168 ~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 168 SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 2 556666666666665
No 114
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=53.81 E-value=1e+02 Score=26.07 Aligned_cols=139 Identities=9% Similarity=0.000 Sum_probs=79.5
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceE
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ 389 (506)
+.|-|-+||. .+.+..++....++..+..+-..+.+- ...|+.+. .|+...+ ..-..++|
T Consensus 3 ~~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~----------~~~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGSS--SDMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVV----------SMLKEYE--ALDRPKLY 62 (159)
T ss_dssp CEEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHHHH--TSCSCEEE
T ss_pred CeEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHH----------HHHHHhh--hcCCCcEE
Confidence 3566667763 367788899999999998776555433 55666533 2221111 11124448
Q ss_pred EeccCc----hhHHHHHHcCCcEEeccCcc---cchhhHHhhhc-cceeeeEeecCCCCCcCHHHHHHHHHHHhCChHHH
Q 010617 390 LSHCGW----NSTMEGVSNGIPFLCWPYFG---DQFLNERYICD-FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 461 (506)
Q Consensus 390 ItHgG~----~sv~eal~~GvP~v~~P~~~---DQ~~na~rv~~-~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~r 461 (506)
|.=.|. .++..++ --+|++.+|... +-.+ -.-+.. --|+.+.-- ++-.++.-++..|..+ .|+.++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv---~~~~nAa~lA~~Il~~-~d~~l~ 136 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALV---LEPKNAALLAARIFSL-YDKEIA 136 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEEC---CSHHHHHHHHHHHHTT-TCHHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEe---cCchHHHHHHHHHHhC-CCHHHH
Confidence 887774 3555554 569999999643 1111 111111 015443221 2445666665544443 588899
Q ss_pred HHHHHHHHHHHhh
Q 010617 462 ARALELKEKAMSS 474 (506)
Q Consensus 462 ~~a~~l~~~~~~~ 474 (506)
++.+..+++..+.
T Consensus 137 ~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 137 DSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9998888877663
No 115
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=53.32 E-value=16 Score=30.48 Aligned_cols=47 Identities=23% Similarity=0.262 Sum_probs=35.8
Q ss_pred CCEEEEE-cCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 3 RPRVLVM-PAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 3 ~~~il~~-~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
.|++|++ --|.. ..+--.+-++..|.++||+|++++++...+.++-+
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 5777753 33433 56666788899999999999999998888777654
No 116
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=52.72 E-value=1e+02 Score=26.39 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=79.9
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcc
Q 010617 308 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 387 (506)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~ 387 (506)
+.|.|-|-+||.. +-..+++....++..+..+-..+..- +..|+.+. .|+-.. ....++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~----------~~~~~a---~~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMF----------DYAEKA---RERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHHH---TTTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHH----------HHHHHH---HhcCCe
Confidence 3667888899744 67788999999999998876555433 55665532 121111 112233
Q ss_pred eEEeccCc----hhHHHHHHcCCcEEeccCcccc---hhhHHhhhc-cceeeeEee-cCCCCCcCHHHHHHHHHHHhCCh
Q 010617 388 CFLSHCGW----NSTMEGVSNGIPFLCWPYFGDQ---FLNERYICD-FWKVGLKFD-RDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 388 ~~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ---~~na~rv~~-~lG~G~~l~-~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
++|.-.|. .++..+ .--+|++.+|..... .+--.-+.. --|+.+..- .++++..++.-++..|-. +.|+
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa-~~d~ 147 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILS-GNSV 147 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHT-TSCH
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHc-CCCH
Confidence 46665553 355555 447999999975321 111111111 014433221 111122334444433332 4688
Q ss_pred HHHHHHHHHHHHHHhhh
Q 010617 459 DFKARALELKEKAMSSV 475 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~ 475 (506)
.++++.++.+++.++.+
T Consensus 148 ~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 148 DYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999988888877643
No 117
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=52.49 E-value=11 Score=32.86 Aligned_cols=46 Identities=11% Similarity=0.120 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
|.| ||++.-.|+.+=. -...+.+.|.++|++|.++.++...+.+..
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 555 4665554555444 678999999999999999999876665543
No 118
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=52.46 E-value=56 Score=31.42 Aligned_cols=99 Identities=10% Similarity=0.150 Sum_probs=56.9
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHH
Q 010617 4 PRVLVMPAPAQG--H--VIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLG 79 (506)
Q Consensus 4 ~~il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (506)
.-|++.|..... . ..-+..+++.|.++|++|.++..+...+..++..... +-....+. ...+
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l~-------g~~s-- 251 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVAT-------GKFQ-- 251 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEECT-------TCCC--
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEee-------CCCC--
Confidence 345566655432 2 2358899999999999999877766555544432110 00001111 1112
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 010617 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~ 136 (506)
+.++.+-+. +-|++|+-- .....+|..+|+|+|.++.
T Consensus 252 -------------l~e~~ali~-----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 252 -------------LGPLAAAMN-----RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp -------------HHHHHHHHH-----TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred -------------HHHHHHHHH-----hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 223333332 358888753 5677778899999999754
No 119
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=52.33 E-value=80 Score=29.98 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+++||+|+-.+.. .....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 3689999876543 245557777889999877664
No 120
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=51.94 E-value=74 Score=29.36 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+.|+++++.++.| =-.++|++|+++|++|.++.-..
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 4567777755543 33688999999999999887653
No 121
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=51.78 E-value=69 Score=28.42 Aligned_cols=45 Identities=16% Similarity=0.142 Sum_probs=34.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHH-HHhCCCeEEEEeCCcchhHHHHh
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQC-LAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~-L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
-+++...|+.|-..-++.+|.. +.+.|..|.+++.+...+.+...
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 3567778899999999998866 45568899999998776655443
No 122
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=50.55 E-value=1.1e+02 Score=26.17 Aligned_cols=142 Identities=13% Similarity=0.147 Sum_probs=79.3
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
++.|-|-+||.. +....++....++..+..+-+.+..- ...|+.+. .|+...+ ...+++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~----------~~~~~a~---~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA------HRTPKETV----------EFVENAD---NRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHHHH---HTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHH----------HHHHHHH---hCCCcE
Confidence 456777788743 67888999999999998876666433 55665533 1211111 122344
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCcccch-hhH--Hhhhc--cceeeeE-eecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQF-LNE--RYICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ~-~na--~rv~~--~lG~G~~-l~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
||.-.|. .++..++. -+|++.+|...-.. ... .-+.. . |+.+. +..++.+-+++.-++..|.. +.|+
T Consensus 65 iIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~ 141 (169)
T 3trh_A 65 FIAAAGLAAHLAGTIAAHT-LKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIA-LQDK 141 (169)
T ss_dssp EEEEECSSCCHHHHHHHTC-SSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHH-TTCH
T ss_pred EEEECChhhhhHHHHHhcC-CCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHc-CCCH
Confidence 8877764 34444433 68999999853211 111 11221 2 54322 22211022344445444443 4588
Q ss_pred HHHHHHHHHHHHHHhh
Q 010617 459 DFKARALELKEKAMSS 474 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~ 474 (506)
.++++.+..+++.++.
T Consensus 142 ~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 142 SIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988888763
No 123
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=50.42 E-value=25 Score=31.45 Aligned_cols=46 Identities=22% Similarity=0.229 Sum_probs=39.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
+.+|++.+.++-.|-....-++..|..+|++|..+...-..+.+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~ 137 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVE 137 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHH
Confidence 4689999999999999999999999999999999977655544433
No 124
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=50.27 E-value=41 Score=30.63 Aligned_cols=36 Identities=11% Similarity=0.192 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|.+.|+++++.++. - =-.++|++|+++|++|.+...
T Consensus 1 M~~~k~vlVTGas~-g--IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSR-G--VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCc-h--HHHHHHHHHHHCCCEEEEEcC
Confidence 66667788885543 2 246889999999999998633
No 125
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=49.91 E-value=17 Score=33.65 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+.++||++ |+ |- =-..|+++|+++||+|+.++-.
T Consensus 1 M~~~~ilVt--Ga-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIA--GC-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEE--CC-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEE--CC-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 777788877 34 63 3457899999999999999764
No 126
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=49.73 E-value=58 Score=29.95 Aligned_cols=42 Identities=10% Similarity=0.225 Sum_probs=28.1
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHH
Q 010617 4 PRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 4 ~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 47 (506)
.|+++++.++. +-+ -.++|++|+++|++|.++......+.++
T Consensus 26 ~k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~~~~~~~ 68 (280)
T 3nrc_A 26 GKKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQFKDRVE 68 (280)
T ss_dssp TCEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTTCHHHHH
T ss_pred CCEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCchHHHHHH
Confidence 46777775331 112 3689999999999999987765334443
No 127
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=49.64 E-value=15 Score=35.36 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
|+.+||+|+=.|..| ..+|..|+++||+|+++......+.+.+
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQT 43 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHH
Confidence 778899998766666 4678999999999999987433344444
No 128
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=49.56 E-value=94 Score=27.58 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=56.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcch----hHHHHhhhcCCCCCCCeEEEecCC-CCCCCCCcc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH----KRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRN 76 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 76 (506)
+||+++..+..+ -+.+|.+++.+. +|+|..+.+.... +..++ .++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~---------~gIp~~~~~~~~~~------ 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ---------AGIATHTLIASAFD------ 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH---------TTCEEEECCGGGCS------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH---------cCCcEEEeCccccc------
Confidence 367766544443 366677777665 5888777554322 22223 2777776542 111
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc-chHHHHHHHcCCceEEEccc
Q 010617 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI-GWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~-~~~~~~A~~lgIP~v~~~~~ 137 (506)
+ . +... .++++.++. .+||++|+=.+. .-...+-+.....++-++++
T Consensus 63 ~-r-------~~~~---~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 S-R-------EAYD---RELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp S-H-------HHHH---HHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred c-h-------hhcc---HHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 0 1111 233445554 789999987653 34555556666677777665
No 129
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=49.19 E-value=20 Score=32.53 Aligned_cols=39 Identities=23% Similarity=0.362 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+.+|++..-|+.|-..-++.+|.+|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 568888889999999999999999999999998887754
No 130
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=46.96 E-value=1.4e+02 Score=25.62 Aligned_cols=146 Identities=16% Similarity=0.160 Sum_probs=79.7
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceE
Q 010617 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (506)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ 389 (506)
+.|-|-+||. .+.+..++....++..+..+-+.+..- ...|+.+. .|+... ....+++|
T Consensus 13 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~----------~~~~~a---~~~g~~Vi 71 (174)
T 3kuu_A 13 VKIAIVMGSK--SDWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLF----------SFAEQA---EANGLHVI 71 (174)
T ss_dssp CCEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHT---TTTTCSEE
T ss_pred CcEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHH----------HHHHHH---HhCCCcEE
Confidence 3566667763 367888999999999998876666433 55666533 111110 11223347
Q ss_pred EeccCc----hhHHHHHHcCCcEEeccCcccch---hhHHhhhc-cceeeeE-eecCCCCCcCHHHHHHHHHHHhCChHH
Q 010617 390 LSHCGW----NSTMEGVSNGIPFLCWPYFGDQF---LNERYICD-FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQDF 460 (506)
Q Consensus 390 ItHgG~----~sv~eal~~GvP~v~~P~~~DQ~---~na~rv~~-~lG~G~~-l~~~~~~~~~~~~l~~ai~~vl~d~~~ 460 (506)
|.=.|. .++..++. -+|++.+|...... +--.-+.. --|+.+. +..++.+-+++.-++..|.. +.|+.+
T Consensus 72 Ia~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~~l 149 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAAKT-LVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDTEL 149 (174)
T ss_dssp EEEEESSCCHHHHHHHTC-SSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred EEECChhhhhHHHHHhcc-CCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCHHH
Confidence 776664 34444433 68999999753211 11111111 0144322 22210012344555544443 458999
Q ss_pred HHHHHHHHHHHHhhhhcC
Q 010617 461 KARALELKEKAMSSVREG 478 (506)
Q Consensus 461 r~~a~~l~~~~~~~~~~g 478 (506)
+++.++.+++.++.+.+.
T Consensus 150 ~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 150 AGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999998888755443
No 131
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=46.82 E-value=1.9e+02 Score=28.64 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=80.1
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
.+.|-|-+||. .+...+++....++..|..+-+-+.+- ...|+... .++.+.+--..+.|
T Consensus 265 ~~~V~Ii~gs~--SD~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~----------~~~~~~~~~g~~~v-- 324 (425)
T 2h31_A 265 QCRVVVLMGST--SDLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETL----------RIKAEYEGDGIPTV-- 324 (425)
T ss_dssp CCEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHHHTTCCCEE--
T ss_pred CCeEEEEecCc--ccHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHH----------HHHHHHHHCCCCeE--
Confidence 46777778874 367888899999999998876555433 55665532 12111111001124
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCcccchhhHHh--hhc--cceeeeEeecCCCCCcCHHHHHHHHHHHhCChHH
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQFLNERY--ICD--FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 460 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ~~na~r--v~~--~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~ 460 (506)
+|.-+|. .++..++ .-+|++.+|....-...... +.. . |+.+..-- ...++.-++..|. -+.|+..
T Consensus 325 iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~---~~~nAa~~A~~Il-~~~~~~l 398 (425)
T 2h31_A 325 FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVL---SPEGSAQFAAQIF-GLSNHLV 398 (425)
T ss_dssp EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECC---CHHHHHHHHHHHH-HTTCHHH
T ss_pred EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEec---CchHHHHHHHHHH-ccCCHHH
Confidence 7776664 3566555 47999999985211111111 111 2 44433221 2345566665555 4568888
Q ss_pred HHHHHHHHHHHHhh
Q 010617 461 KARALELKEKAMSS 474 (506)
Q Consensus 461 r~~a~~l~~~~~~~ 474 (506)
+++.+..+...+..
T Consensus 399 ~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 399 WSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888777653
No 132
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=46.56 E-value=9.2 Score=33.83 Aligned_cols=45 Identities=9% Similarity=0.018 Sum_probs=34.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
+.||++.-.|+.|=.. ...+.+.|.++|++|.++.++...+.+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 3578876666665554 78999999999999999999776655443
No 133
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=46.23 E-value=29 Score=34.85 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=35.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhHHHH
Q 010617 6 VLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 6 il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~ 48 (506)
+++...|+.|-..-++.+|...+. .|..|.+++.+...+.+..
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~~ 246 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLTL 246 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHH
Confidence 557778899999999999999987 5899999999876654443
No 134
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=46.01 E-value=14 Score=32.97 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhHHHH
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~ 48 (506)
++.||++.-.|+.+ .+-...+.+.|.+ +|++|.++.++...+.+..
T Consensus 18 ~~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 18 RKFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp SSEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred CCCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 35678876666666 4456899999999 8999999999887766644
No 135
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=45.85 E-value=13 Score=34.49 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=36.9
Q ss_pred cceEEeccCchhHHHHHHc---CCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 386 IACFLSHCGWNSTMEGVSN---GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 386 v~~~ItHgG~~sv~eal~~---GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
++++|+=||-||+.+++.. ++|++.++. + . +|. .- .+.++++.+++++++..
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G----------~-~Gf--l~------~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-G----------R-LGF--LT------SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES-S----------S-CCS--SC------CBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C----------C-CCc--cC------cCCHHHHHHHHHHHHcC
Confidence 3459999999999999876 889888873 2 1 122 21 23577888888888754
No 136
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=45.61 E-value=1.5e+02 Score=25.62 Aligned_cols=146 Identities=16% Similarity=0.137 Sum_probs=83.5
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
++.|-|-+||. .+.+.+++....|+..|..+-..+..- ...|+.+. .|+.+. ....+++
T Consensus 21 ~~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~----------~~~~~a---~~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQ--SDWETMRHADALLTELEIPHETLIVSA------HRTPDRLA----------DYARTA---AERGLNV 79 (182)
T ss_dssp CCSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHT---TTTTCCE
T ss_pred CCEEEEEECcH--HHHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHH----------HHHHHH---HhCCCcE
Confidence 44677778864 367888999999999998876655433 55665532 111111 0111334
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCcccc--hhhH-Hhhhc--cceeeeE-eecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQ--FLNE-RYICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ--~~na-~rv~~--~lG~G~~-l~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
||.-.|. .++..++ --+|++.+|..... -..+ .-+.. . |+.+. +..++-+-.++.-++..|. -+.|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH
Confidence 7776663 4555555 47999999975421 1111 11222 2 55532 2221002245555665554 34689
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 010617 459 DFKARALELKEKAMSSVREG 478 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~g 478 (506)
.++++.+..+++.++.+.+.
T Consensus 157 ~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 157 ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999888754443
No 137
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=45.45 E-value=89 Score=29.12 Aligned_cols=79 Identities=14% Similarity=0.199 Sum_probs=49.5
Q ss_pred CeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEE
Q 010617 32 FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCF 111 (506)
Q Consensus 32 h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~Dlv 111 (506)
.+..+++++.+.-..+.+ |+....+.. ..++ . +-....+.++++.++. .+..+|
T Consensus 179 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~~~~-~------------eps~~~l~~l~~~ik~---~~v~~i 232 (286)
T 3gi1_A 179 SKTFVTQHTAFSYLAKRF---------GLKQLGISG-ISPE-Q------------EPSPRQLKEIQDFVKE---YNVKTI 232 (286)
T ss_dssp CCEEEEEESCCHHHHHHT---------TCEEEEEEC-SCC----------------CCHHHHHHHHHHHHH---TTCCEE
T ss_pred CCEEEEECCchHHHHHHC---------CCeEeeccc-cCCC-C------------CCCHHHHHHHHHHHHH---cCCCEE
Confidence 444455666666666665 677665432 1111 1 1122335555566655 889999
Q ss_pred EecCCcc--hHHHHHHHcCCceEEEcc
Q 010617 112 IADGNIG--WSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 112 V~D~~~~--~~~~~A~~lgIP~v~~~~ 136 (506)
+++.... .+-.+|+..|++.+.+.+
T Consensus 233 f~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 233 FAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp EECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred EEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 9998666 567889999999988654
No 138
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=45.37 E-value=21 Score=33.31 Aligned_cols=33 Identities=33% Similarity=0.408 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
||||+. |+.|-+- .+|+++|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 577654 4555443 46889999999999998754
No 139
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=45.15 E-value=67 Score=32.07 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=32.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcch
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNH 43 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~ 43 (506)
.|+|+..++.|-..-...||..|+++ |++|.++..+.+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 34566667779999999999999999 9999999887654
No 140
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=45.15 E-value=34 Score=34.87 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=35.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhHHH
Q 010617 6 VLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 6 il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v~ 47 (506)
+++...|+.|-..-++.+|..++.+ |..|.+++.+...+.+.
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l~ 287 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEETA 287 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHHH
Confidence 4567788999999999999999987 99999999987765443
No 141
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=45.00 E-value=20 Score=33.27 Aligned_cols=43 Identities=16% Similarity=0.171 Sum_probs=34.6
Q ss_pred CCCCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010617 1 MSRPRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (506)
Q Consensus 1 m~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 43 (506)
|.++|.+|++.+.. |-=.-...|+..|..||++|+..--+++.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccce
Confidence 67899999997744 55578889999999999999998766544
No 142
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=44.90 E-value=57 Score=29.72 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.|+++++.++.| =-.++|++|+++|++|.++.-..
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 356677755443 34688999999999999987654
No 143
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=43.77 E-value=1.8e+02 Score=27.22 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=53.4
Q ss_pred EEEEEcCCCcc---CH--HHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHH
Q 010617 5 RVLVMPAPAQG---HV--IPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLG 79 (506)
Q Consensus 5 ~il~~~~~~~G---H~--~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (506)
.|++.|....+ .+ --+..+++.|.++|++|.++..+...+..++..... ..........+.. ..+
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~-~~~~~~~~~~l~g-------~~s-- 251 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAAL-NTEQQAWCRNLAG-------ETQ-- 251 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTS-CHHHHTTEEECTT-------TSC--
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhh-hhccccceEeccC-------cCC--
Confidence 45666644121 22 367889999999999998876655444333221000 0000000111111 011
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEc
Q 010617 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (506)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~ 135 (506)
+.++.+-+. .-|++|+-. .....+|..+|+|+|.++
T Consensus 252 -------------l~e~~ali~-----~a~l~I~~D--sg~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 252 -------------LDQAVILIA-----ACKAIVTND--SGLMHVAAALNRPLVALY 287 (348)
T ss_dssp -------------HHHHHHHHH-----TSSEEEEES--SHHHHHHHHTTCCEEEEE
T ss_pred -------------HHHHHHHHH-----hCCEEEecC--CHHHHHHHHcCCCEEEEE
Confidence 223333332 358888753 456677888999999965
No 144
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=43.44 E-value=71 Score=30.38 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
++||+|+-.|..+ +...++|.++||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 5899998877554 344678888999998887743
No 145
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=43.43 E-value=28 Score=29.63 Aligned_cols=37 Identities=24% Similarity=0.468 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCccCH-----HHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~-----~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
..+|+++| ++|=. ++...|++.|.++|.+|.|..+|-
T Consensus 23 A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35777877 55533 689999999999999999999873
No 146
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=43.16 E-value=38 Score=33.49 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=49.8
Q ss_pred CC--CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCH
Q 010617 1 MS--RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (506)
Q Consensus 1 m~--~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (506)
|+ +.|++++.. +..+ . .+.++..+.|++|+++.+....... .. ..--.++.++.. .+.
T Consensus 1 M~~~~k~l~Il~~-~~~~-~---~i~~aa~~lG~~vv~v~~~~~~~~~--~~------~~~d~~~~~~~~-------~d~ 60 (425)
T 3vot_A 1 MTKRNKNLAIICQ-NKHL-P---FIFEEAERLGLKVTFFYNSAEDFPG--NL------PAVERCVPLPLF-------EDE 60 (425)
T ss_dssp -CCCCCEEEEECC-CTTC-C---HHHHHHHHTTCEEEEEEETTSCCCC--SC------TTEEEEEEECTT-------TCH
T ss_pred CCCCCcEEEEECC-ChhH-H---HHHHHHHHCCCEEEEEECCCccccc--CH------hhccEEEecCCC-------CCH
Confidence 76 346666653 3332 2 3567777889999998654322100 00 001123333321 111
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEe--cCCcchHHHHHHHcCCce
Q 010617 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNIGWSMEIAKKMNVRG 131 (506)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~~~~~~~A~~lgIP~ 131 (506)
..++ ..+.++.++ .++|.|+. |.....+..+++.+|+|.
T Consensus 61 ~~~~--------~~~~~~~~~------~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 61 EAAM--------DVVRQTFVE------FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHH--------HHHHHHHHH------SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHH--------HHHHHhhhh------cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1111 123344444 78999884 433345677899999994
No 147
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=43.06 E-value=55 Score=34.04 Aligned_cols=45 Identities=27% Similarity=0.243 Sum_probs=35.4
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
.+|+|++ -|+-|-..-...||..|+++|++|.++..+.. ..+...
T Consensus 8 ~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~-~~l~~~ 53 (589)
T 1ihu_A 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA-SNVGQV 53 (589)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT-CCHHHH
T ss_pred CEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCCC-cCHHHH
Confidence 4566555 55669999999999999999999999999863 444444
No 148
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=42.85 E-value=29 Score=29.66 Aligned_cols=36 Identities=19% Similarity=0.438 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCccCH-----HHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~-----~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
..+|+++| ++|=. ++...|++.|.++|.+|.|..+|
T Consensus 22 A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 34677877 55432 68999999999999999999987
No 149
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=42.20 E-value=16 Score=33.99 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=36.3
Q ss_pred cceEEeccCchhHHHHHHc------CCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC
Q 010617 386 IACFLSHCGWNSTMEGVSN------GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 386 v~~~ItHgG~~sv~eal~~------GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
++++|.=||-||+.++... ++|++.+|.. . +|. + ..+.++++.+++++++..
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---Y-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---S-----CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---C-----CcCCHHHHHHHHHHHHcC
Confidence 4459999999999999765 8999988741 1 232 1 123466777788887753
No 150
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=41.85 E-value=41 Score=31.86 Aligned_cols=40 Identities=28% Similarity=0.287 Sum_probs=30.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
+||+++=.|+.| ..+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 688888766666 457889999999999998765 4666554
No 151
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=41.35 E-value=24 Score=33.47 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
=+++|+++..+ ....++++|.++||+|.++.....
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 06789988865 567899999999999998877543
No 152
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=40.61 E-value=1.8e+02 Score=25.13 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=83.0
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
-|.|-|-+||.. +.+.+++....++..|.++-..+..- ...|+.+.+ ++.+. ....+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a---~~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFE----------YAKNA---EERGIEV 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHT---TTTTCCE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHHH---HhCCCcE
Confidence 468888888743 67888999999999998866555433 556655331 11111 1112334
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCccc--chhhHH-hhhccc--eeeeE-eecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGD--QFLNER-YICDFW--KVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~D--Q~~na~-rv~~~l--G~G~~-l~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
+|.=.|. .++..++ --+|++.+|.... .-..+. -+.. + |+.+. +.. ++-.++.-++..|. -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~ 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYP 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH
Confidence 7776653 3555555 6789999997542 111221 1222 3 54322 222 24456666666555 34688
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 010617 459 DFKARALELKEKAMSSVR 476 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~ 476 (506)
.++++.+..+++..+.+.
T Consensus 147 ~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 147 EIARKVKEYKERMKREVL 164 (183)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999888888777533
No 153
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=40.58 E-value=43 Score=31.61 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=30.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
+||+++-.|+.| ..+|..|+++||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 578888777777 456889999999999998765 4556554
No 154
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.41 E-value=1.8e+02 Score=25.06 Aligned_cols=145 Identities=17% Similarity=0.136 Sum_probs=80.8
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
+|.|-|-+||.. +-+.+++..+.|+..+..+-..+..- ...|+.+. .|+...+ ...+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~----------~~~~~a~---~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMF----------EYAETAR---ERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHHTT---TTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHH----------HHHHHHH---hcCceE
Confidence 567888899844 56789999999999998876666433 45565532 2211111 122344
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCccc---chhhHHhhhccc--eeeeEe-ecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGD---QFLNERYICDFW--KVGLKF-DRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~D---Q~~na~rv~~~l--G~G~~l-~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
+|.=.|. .++..+ .--+|++.+|.... -.+.-.-+.. + |+.+.- ..++.+..++.-++..|-. +.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCH
Confidence 7766663 344444 45689999998643 2222222222 2 333322 1110011223333333332 4588
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 010617 459 DFKARALELKEKAMSSVRE 477 (506)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~ 477 (506)
+++++.+..+++.++.+.+
T Consensus 158 ~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998888887765443
No 155
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=40.36 E-value=32 Score=29.95 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccCH-----HHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~-----~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.+|+++| +||=. ++...|++.|.++|.+|.|..+|
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 4677777 55432 68899999999999999999987
No 156
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=40.16 E-value=33 Score=30.03 Aligned_cols=35 Identities=20% Similarity=0.451 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccCH-----HHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~-----~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.+|+++| ++|=. ++...|++.|.++|.+|.|..+|
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 4677777 55433 68899999999999999999987
No 157
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=39.98 E-value=36 Score=29.22 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|++++|+++ ++.|-+ -..++++|+++||+|+.++-.
T Consensus 1 M~~~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 776777665 344433 367899999999999998764
No 158
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=39.62 E-value=47 Score=30.29 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.|+++++.++.| =-.++|++|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 367778765554 347899999999999998754
No 159
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=39.48 E-value=22 Score=31.46 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=25.0
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|++ ++||++ |+.|.+- ..|++.|+++||+|+.++-..
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 775 455554 4555443 578999999999999987653
No 160
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=39.47 E-value=22 Score=31.90 Aligned_cols=44 Identities=11% Similarity=0.051 Sum_probs=35.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
|||.|..-|+-|-..-...||..|+++|++|.++-.+.. ..+..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~-~~l~~ 44 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD-SCLGQ 44 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT-SCHHH
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC-cChHH
Confidence 468886667779999999999999999999999966553 33433
No 161
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=39.44 E-value=1e+02 Score=28.25 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=24.6
Q ss_pred CCccEEE-ecCCcc-hHHHHHHHcCCceEEEccc
Q 010617 106 EKIDCFI-ADGNIG-WSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 106 ~~~DlvV-~D~~~~-~~~~~A~~lgIP~v~~~~~ 137 (506)
..||+|| +|...- -+..=|.++|||+|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 5788887 565433 6888899999999997654
No 162
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=39.39 E-value=21 Score=28.81 Aligned_cols=30 Identities=27% Similarity=0.137 Sum_probs=22.3
Q ss_pred CCccEEEecCCcc--hHHHHHHHc---CCceEEEc
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM---NVRGAVFW 135 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l---gIP~v~~~ 135 (506)
.+||+||.|...+ -|..+++.+ ++|++.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 7999999999877 466665554 78877654
No 163
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=39.17 E-value=20 Score=34.18 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=28.1
Q ss_pred EEEEcCCCccCH--------------HHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 6 VLVMPAPAQGHV--------------IPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 6 il~~~~~~~GH~--------------~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
||+.+.|+.=.+ ..-.++|++++++|++|+|++.+..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 666666664444 2567899999999999999987643
No 164
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=38.34 E-value=34 Score=29.28 Aligned_cols=36 Identities=25% Similarity=0.428 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCccCH-----HHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~-----~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
..+|+++| ++|=. ++...|++.|.++|.+|.|..+|
T Consensus 30 A~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 30 SHSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp CSEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 34677877 55432 68999999999999999999987
No 165
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.02 E-value=90 Score=28.69 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 467777755442 346899999999999998864
No 166
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=37.82 E-value=42 Score=26.05 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=23.9
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccch
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSS 138 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------gIP~v~~~~~~ 138 (506)
.+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 7899999998765 466666554 58888876543
No 167
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=37.69 E-value=31 Score=24.74 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=39.6
Q ss_pred cCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhc
Q 010617 442 ITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 495 (506)
Q Consensus 442 ~~~~~l~~ai~~vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 495 (506)
...+++.+.-.+.|+|++++..-..=+..|-+. .|-+.++|++.++.....
T Consensus 12 ~~Re~li~~Av~FLqdp~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra~~~ 62 (70)
T 2w84_A 12 LPREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQSGTA 62 (70)
T ss_dssp CCCHHHHHHHHHHHCSTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHHTCC
T ss_pred CchHHHHHHHHHHhCChhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHccCC
Confidence 345666666677899999888887777788774 899999999999885433
No 168
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=37.55 E-value=53 Score=32.94 Aligned_cols=43 Identities=19% Similarity=0.303 Sum_probs=35.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhHHH
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~ 47 (506)
-+++...|+.|-..-++.++..++. .|..|.+++.+.....+.
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l~ 248 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLV 248 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHHH
Confidence 3567778899999999999999986 689999999887654443
No 169
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=37.54 E-value=25 Score=33.76 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+++||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 567899998665555 34788899999999988653
No 170
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=37.02 E-value=82 Score=28.11 Aligned_cols=107 Identities=9% Similarity=0.074 Sum_probs=52.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHH
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (506)
++||+|+..+..+.+.. |.+++.+ .+++|..+.+.......+.+. ..|+.+..++... . .+ .
T Consensus 12 ~~ri~vl~SG~gsnl~a---ll~~~~~~~~~eI~~Vis~~~a~~~~~A~------~~gIp~~~~~~~~--~---~~-r-- 74 (215)
T 3da8_A 12 PARLVVLASGTGSLLRS---LLDAAVGDYPARVVAVGVDRECRAAEIAA------EASVPVFTVRLAD--H---PS-R-- 74 (215)
T ss_dssp SEEEEEEESSCCHHHHH---HHHHSSTTCSEEEEEEEESSCCHHHHHHH------HTTCCEEECCGGG--S---SS-H--
T ss_pred CcEEEEEEeCChHHHHH---HHHHHhccCCCeEEEEEeCCchHHHHHHH------HcCCCEEEeCccc--c---cc-h--
Confidence 56888877665444433 3344433 346887776654332221111 0267666553110 0 00 0
Q ss_pred HHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc-chHHHHHHHcCCceEEEccc
Q 010617 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI-GWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~-~~~~~~A~~lgIP~v~~~~~ 137 (506)
....+ ++++.++. .++|++|+=.+. .-...+-+.+.-.++-++++
T Consensus 75 -----~~~d~---~~~~~l~~---~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 75 -----DAWDV---AITAATAA---HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp -----HHHHH---HHHHHHHT---TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred -----hhhhH---HHHHHHHh---hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 11122 23344444 899999976543 34444555555556666654
No 171
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.01 E-value=1.8e+02 Score=26.39 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 356777755442 3468999999999999988744
No 172
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=36.79 E-value=74 Score=29.19 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.|+.+++.++.| =-.++|++|+++|++|.++...
T Consensus 9 ~~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 9 EGKTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 3467777755543 3468899999999999988654
No 173
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=36.77 E-value=1.5e+02 Score=28.02 Aligned_cols=80 Identities=10% Similarity=0.056 Sum_probs=50.7
Q ss_pred CCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccE
Q 010617 31 GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDC 110 (506)
Q Consensus 31 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~Dl 110 (506)
..+..+++++.+.-..+.+ |+....+.. ..++ .. -....+.++++.++. .+..+
T Consensus 189 ~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~-~~~~-~e------------ps~~~l~~l~~~ik~---~~v~~ 242 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLAKEY---------GLKQVPIAG-LSPD-QE------------PSAASLAKLKTYAKE---HNVKV 242 (312)
T ss_dssp SCCEEEESSCTTHHHHHHT---------TCEEEECSS-CCSS-SC------------CCHHHHHHHHHHTTS---SCCCE
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEEEeec-cCCC-CC------------CCHHHHHHHHHHHHH---cCCCE
Confidence 3344555666666555555 677766532 1111 11 122335666777766 78999
Q ss_pred EEecCCcc--hHHHHHHHcCCceEEEcc
Q 010617 111 FIADGNIG--WSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 111 vV~D~~~~--~~~~~A~~lgIP~v~~~~ 136 (506)
|+++.... .+-.+|+..|++.+.+.+
T Consensus 243 If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 243 IYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp EECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred EEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 99998766 478899999999887654
No 174
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=36.76 E-value=53 Score=33.73 Aligned_cols=27 Identities=19% Similarity=0.116 Sum_probs=20.6
Q ss_pred CCccEEEecCCcchHHHHHHHc-------CCceEEEc
Q 010617 106 EKIDCFIADGNIGWSMEIAKKM-------NVRGAVFW 135 (506)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~l-------gIP~v~~~ 135 (506)
.+||++|.... +..+|+++ |||++.+.
T Consensus 437 ~~pDLlig~s~---~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 437 DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEECS
T ss_pred cCCCEEEECcc---HHHHHHHhhcccccCCCceEEec
Confidence 78999999964 34466666 99999853
No 175
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=36.52 E-value=2.2e+02 Score=24.88 Aligned_cols=97 Identities=8% Similarity=-0.006 Sum_probs=57.7
Q ss_pred chhhhhhhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEE--ec
Q 010617 297 SNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI--SW 374 (506)
Q Consensus 297 ~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~--~~ 374 (506)
.++-.+|.++. ..+||-| ....+....++....+-++|-++... +. +..+ ....+. ..
T Consensus 48 ~~lg~~LA~~G---~~vVsGg-----~~GiM~aa~~gAl~~GG~~iGVlP~e------~~-~~~~-----~~~~~~~~~~ 107 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGG-----RDGVMELVSQGVREAGGTVVGILPDE------EA-GNPY-----LSVAVKTGLD 107 (195)
T ss_dssp HHHHHHHHHTT---CEEEECC-----SSHHHHHHHHHHHHTTCCEEEEESTT------CC-CCTT-----CSEEEECCCC
T ss_pred HHHHHHHHHCC---CEEEeCC-----HHHHHHHHHHHHHHcCCcEEEEeCCc------cc-CCCC-----cceeeecCCC
Confidence 44555666643 6666633 34567777777767777887777543 11 1111 122233 22
Q ss_pred cc-hhhhhcCCCcceEEeccCchhHHH---HHHcCCcEEeccC
Q 010617 375 AP-QLRVLNHPSIACFLSHCGWNSTME---GVSNGIPFLCWPY 413 (506)
Q Consensus 375 vp-q~~lL~h~~v~~~ItHgG~~sv~e---al~~GvP~v~~P~ 413 (506)
.+ -+.++..-+-..++--||.||+-| ++.+|+|+++++.
T Consensus 108 f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 108 FQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 33 455554444456777899998765 5789999999973
No 176
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=36.46 E-value=72 Score=29.46 Aligned_cols=47 Identities=6% Similarity=0.094 Sum_probs=38.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCCcchhHHHHh
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQC--------LAKH-GFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~~~~~~v~~~ 49 (506)
+.+|++.+.++-.|-....-++.. |..+ |++|..+...-..+.+.+.
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 568888899999999999999977 9999 9999998876555544443
No 177
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=36.46 E-value=64 Score=26.62 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=57.3
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHHHHH
Q 010617 7 LVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCL 86 (506)
Q Consensus 7 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (506)
+|++... .+=.-++.+|+.|.+.|+++ +.+....+.+++. |+....+......+ .
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~---------Gi~v~~v~k~~egg--~----------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN---------NVPATPVAWPSQEG--Q----------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT---------TCCCEEECCGGGC---------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc---------CCeEEEEEeccCCC--c-----------
Confidence 4444332 34567889999999999974 4455666777765 55544443221100 0
Q ss_pred HhCcHHHHHHHHHHhcCCCCCccEEEecCCc--------chHHHHHHHcCCceEE
Q 010617 87 QVMPGKLEELIEEINSREDEKIDCFIADGNI--------GWSMEIAKKMNVRGAV 133 (506)
Q Consensus 87 ~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~--------~~~~~~A~~lgIP~v~ 133 (506)
+...+.+.++++. .+.|+||.-..- ..-...|-..|||+++
T Consensus 82 ~~~~~~i~d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 NPSLSSIRKLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp ---CBCHHHHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ccccccHHHHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0000234555555 899999975432 1456678889999998
No 178
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=36.45 E-value=1.1e+02 Score=27.88 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
+-|+.+++.++.| =-.++|++|+++|.+|.+...
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3588999977765 346899999999999987644
No 179
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=36.26 E-value=1.2e+02 Score=27.51 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+ |.++++.++.| =-.++|++|+++|++|.+....
T Consensus 1 Mn--K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MN--RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -C--CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CC--CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 55 35667766654 3468999999999999887654
No 180
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=36.13 E-value=77 Score=28.84 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.|+++++.++. - =-.++|+.|+++|++|.++...
T Consensus 24 ~~k~vlITGas~-g--IG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMG-G--LGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTS-H--HHHHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCc-h--HHHHHHHHHHHCCCEEEEEcCC
Confidence 456777775543 2 2368899999999999888743
No 181
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=36.11 E-value=1.8e+02 Score=26.03 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.|+++++.++.| =-.++|+.|+++|++|.++.-.
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4467777755442 3468999999999999988664
No 182
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=36.01 E-value=78 Score=28.98 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 9 ~gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 3467777755542 3468999999999999988643
No 183
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=35.97 E-value=1.2e+02 Score=27.60 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+-|+.+++.++.| =-.++|++|+++|.+|.+....
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 5578888877665 3578999999999999887653
No 184
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=35.65 E-value=71 Score=32.43 Aligned_cols=26 Identities=31% Similarity=0.150 Sum_probs=21.6
Q ss_pred CCccEEEecCCcchHHHHHHHcCCceEEE
Q 010617 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (506)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgIP~v~~ 134 (506)
.+||++|... -...+|+++|||++.+
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 7999999863 4667899999999864
No 185
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=35.38 E-value=89 Score=31.74 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=53.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecC--CCCCCC----CCcc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP--DGMEPW----EDRN 76 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~--~~~~~~----~~~~ 76 (506)
+++-+|++. ++=.-++.+|+.|.+.|+++. ++....+.+++. |+....+. .++|.- -..-
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTL 74 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTL 74 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSC
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCccccC
Confidence 445555555 334458899999999998875 676778888876 56555443 122221 2222
Q ss_pred CHHHHHHHHHH-hCcHHHHHHHHHHhcCCCCCccEEEecCCcc
Q 010617 77 DLGKLIEKCLQ-VMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (506)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~ 118 (506)
.+. ...-.+. .-.+.-.+-+++..- .++|+||++.+-+
T Consensus 75 HP~-ihgGiLa~r~~~~h~~~l~~~~i---~~iDlVvvNLYPF 113 (523)
T 3zzm_A 75 HPR-VHAGLLADLRKSEHAAALEQLGI---EAFELVVVNLYPF 113 (523)
T ss_dssp SHH-HHHHHHCCTTSHHHHHHHHHHTC---CCCSEEEEECCCH
T ss_pred Cch-hhhhhccCCCCHHHHHHHHHCCC---CceeEEEEeCCCh
Confidence 222 2222222 222222222333333 6889999997643
No 186
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=35.21 E-value=1.1e+02 Score=28.96 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=22.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|||+|+-.|. ......++|.++||+|..+.+..
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 5777775432 23455677888899998887643
No 187
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=35.04 E-value=46 Score=31.95 Aligned_cols=73 Identities=8% Similarity=0.056 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccCchhHHHH
Q 010617 322 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEG 401 (506)
Q Consensus 322 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~~sv~ea 401 (506)
.+.+..+.+.+++.+...+.||...+..+ ..++.++++...+-++|.. ||-+.....++-|
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 34567888999999999999998876521 1225566666666667776 8888888888878
Q ss_pred HH--cCCcEEeccC
Q 010617 402 VS--NGIPFLCWPY 413 (506)
Q Consensus 402 l~--~GvP~v~~P~ 413 (506)
|+ .|+..+-=|.
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 77 4777766554
No 188
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=34.70 E-value=1.1e+02 Score=28.17 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.++++++.++.| =-.++|++|+++|++|.++...
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 27 PSPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777755443 3468999999999999988654
No 189
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=34.55 E-value=2.4e+02 Score=24.81 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=52.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcch----hHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH----KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (506)
+||.++..+..+. +.+|.+++.+. +|+|..+.+.... +...+ .++.+..++..-- .+
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~---------~gIp~~~~~~~~~-----~~ 63 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAER---------AGIPTRVINHKLY-----KN 63 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH---------TTCCEEECCGGGS-----SS
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH---------cCCCEEEECcccc-----Cc
Confidence 3677665455443 33444555443 6898877654432 22222 2666655442110 01
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCc-chHHHHHHHcCCceEEEccc
Q 010617 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI-GWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~-~~~~~~A~~lgIP~v~~~~~ 137 (506)
- ....+.+.+.+++ .+||+||+=.+. .....+-......++-+.++
T Consensus 64 r--------~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 64 R--------VEFDSAIDLVLEE------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp H--------HHHHHHHHHHHHH------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred h--------hhhhHHHHHHHHh------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0 1111223334444 789999976653 34445556666667776655
No 190
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=34.23 E-value=1.2e+02 Score=27.72 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+-|+.+++.++.| =-.++|++|++.|.+|.+.....
T Consensus 6 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 6 QDKVVIVTGGASG---IGGAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECCc
Confidence 5689999977664 23788999999999999887654
No 191
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=33.97 E-value=1.5e+02 Score=26.73 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.|+++++.++ |---=-.++|+.|+++|++|.++...
T Consensus 6 ~~k~vlVTGas-g~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 6 EGRNIVVMGVA-NKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp TTCEEEEECCC-STTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcCC-CCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 34667777443 22012468899999999999888654
No 192
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=33.89 E-value=54 Score=26.41 Aligned_cols=39 Identities=5% Similarity=0.032 Sum_probs=27.3
Q ss_pred EEE-EEcCCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCCcch
Q 010617 5 RVL-VMPAPAQG--HVIPLLEFSQCLAKHGFRV-TFVNTDYNH 43 (506)
Q Consensus 5 ~il-~~~~~~~G--H~~p~l~La~~L~~rGh~V-t~~~~~~~~ 43 (506)
|++ ++..+-+| .....+.+|.++++.||+| .++-.....
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGV 44 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHH
Confidence 455 34444443 4567799999999999999 887664443
No 193
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=33.68 E-value=1.7e+02 Score=27.67 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.+||+|+-.|..+ +...++|.++||+|..+.+..
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 3699998777544 344678888899998887753
No 194
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.27 E-value=1.5e+02 Score=30.40 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=25.5
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEE
Q 010617 93 LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (506)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~ 134 (506)
+.++++. .+||++|.. .....+|+++|||++.+
T Consensus 448 l~~~i~~------~~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 448 MEVVLEK------LKPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHH------HCCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred HHHHHHh------cCCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 4555555 689999987 34578999999999964
No 195
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=33.08 E-value=1.2e+02 Score=27.77 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.|+++++.++.| =-.++|++|+++|++|.++..
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777755443 346899999999999988765
No 196
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.92 E-value=1.4e+02 Score=27.31 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
-|+++++.++.| =-.++|++|+++|++|.++..
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 467777755442 346899999999999998854
No 197
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=32.84 E-value=1e+02 Score=31.47 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=21.3
Q ss_pred CCccEEEecCCcchHHHHHHHc-------CCceEEE
Q 010617 106 EKIDCFIADGNIGWSMEIAKKM-------NVRGAVF 134 (506)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~l-------gIP~v~~ 134 (506)
.+||++|.+. .+..+|+++ |||++.+
T Consensus 433 ~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 433 RQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 6899999985 357788888 9999875
No 198
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=32.73 E-value=53 Score=32.84 Aligned_cols=41 Identities=17% Similarity=0.356 Sum_probs=33.0
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010617 4 PRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (506)
Q Consensus 4 ~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 44 (506)
.+|+ ++-.++.|-..-+..||..|.++|++|.++..+.+..
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r~ 138 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRP 138 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSCH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccch
Confidence 4555 4445566999999999999999999999998776553
No 199
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=32.55 E-value=49 Score=31.22 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCCc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~~ 41 (506)
|++++||++..+.. ..+++.|.+. | ++|..+....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 88999999865544 4789999886 7 8888876543
No 200
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.09 E-value=1.1e+02 Score=27.82 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPA---LGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 467777755443 2468899999999999887654
No 201
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=32.04 E-value=1.1e+02 Score=26.85 Aligned_cols=36 Identities=25% Similarity=0.226 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
.++||+. |+.|.+ -.+++++|+++||+|+.++-...
T Consensus 21 ~~~ilVt--GatG~i--G~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVV--GANGKV--ARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEE--CCCChH--HHHHHHHHHhCCCeEEEEECChH
Confidence 4566554 344443 35788999999999999986543
No 202
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=31.89 E-value=83 Score=23.62 Aligned_cols=55 Identities=20% Similarity=0.163 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCh----HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhccccCCCCC
Q 010617 446 EIKNKVDQVLGNQ----DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAHNSPV 503 (506)
Q Consensus 446 ~l~~ai~~vl~d~----~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 503 (506)
+....+.++.+|. .+|+.|.+.++.+.+ ++-+..-....-+..|.+-..+.|-|.
T Consensus 14 ~~~~~L~~I~~D~sVPRNIRraA~ea~~~L~~---e~~~~~vRAA~aIs~LDeISnDPNmP~ 72 (89)
T 2qsb_A 14 EVMYLLDELSQDITVPKNVRKVAQDSKAKLSQ---ENESLDLRCATVLSMLDEMANDPNVPA 72 (89)
T ss_dssp HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTC---TTSCHHHHHHHHHHHHHHHHTCTTSCH
T ss_pred HHHHHHHHHHcCCCCChHHHHHHHHHHHHHhC---CCcchhHHHHHHHHHHHHhhcCCCCCh
Confidence 3344566777777 567777777776665 344444444555555555555565554
No 203
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=31.70 E-value=77 Score=27.07 Aligned_cols=45 Identities=13% Similarity=0.168 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCcchhHH
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRV 46 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~v 46 (506)
|.+++|.++. ++.+++--+...++.|.+-| |+|.+++.....+.+
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~ 50 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKET 50 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHH
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHH
Confidence 6777888776 78899988888888888877 666666655444444
No 204
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=31.70 E-value=49 Score=26.30 Aligned_cols=34 Identities=15% Similarity=0.371 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.++|+++- .|.+- ..+++.|.++||+|+++...
T Consensus 3 ~~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 357888773 25553 36789999999999998664
No 205
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=31.69 E-value=36 Score=33.19 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQG-H---VIPLLEFSQCL-AKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~G-H---~~p~l~La~~L-~~rGh~Vt~~~~~ 40 (506)
|+|+||+++..+..+ | +.....++++| .++||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 888999988754333 2 33568889999 9999999998643
No 206
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=31.59 E-value=1.6e+02 Score=26.23 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=0.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccC
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (506)
|+ +.||.++..+..+. +.+|.+++.+.+ ++|..+.+........+.-... |+.+..++...-..
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~-----gIp~~~~~~~~~~~----- 71 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY-----GIPTFVVKRKPLDI----- 71 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCBTTBCH-----
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc-----CCCEEEeCcccCCh-----
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCCcc-hHHHHHHHcCCceEEEccc
Q 010617 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgIP~v~~~~~ 137 (506)
+.+.+.+++ .++|++|+-.+.- -...+-+.+.-.++-++++
T Consensus 72 -------------~~~~~~L~~------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 -------------EHISTVLRE------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -------------HHHHHHHHH------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------------HHHHHHHHH------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 207
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=31.54 E-value=56 Score=31.23 Aligned_cols=72 Identities=6% Similarity=0.040 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccCchhHHHHH
Q 010617 323 DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGV 402 (506)
Q Consensus 323 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~~sv~eal 402 (506)
+.+..+.+.+++.+...+.||...+..+ ..++.++++.+.+-++|.. ||-+....+++-+|
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al 123 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-----------------SNQLLPYLDYDLISENPKI--LCGFSDITALATAI 123 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-----------------HHHHhhhcchhhhccCCeE--EEecccccHHHHHH
Confidence 4567888999999999999998865511 1235667777777777776 88888777777777
Q ss_pred H--cCCcEEeccC
Q 010617 403 S--NGIPFLCWPY 413 (506)
Q Consensus 403 ~--~GvP~v~~P~ 413 (506)
+ .|+..+.=|.
T Consensus 124 ~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 124 YTQTELITYSGAH 136 (327)
T ss_dssp HHHHCBCEEECCC
T ss_pred HHhcCeEEEeCcc
Confidence 5 3555554443
No 208
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.38 E-value=1.1e+02 Score=29.24 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=20.6
Q ss_pred CCCcceEEeccCchhH---HHHHHcCCcEEe
Q 010617 383 HPSIACFLSHCGWNST---MEGVSNGIPFLC 410 (506)
Q Consensus 383 h~~v~~~ItHgG~~sv---~eal~~GvP~v~ 410 (506)
.|++ +|++||.-++ ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5666 9999998664 557778999986
No 209
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=30.76 E-value=72 Score=28.99 Aligned_cols=40 Identities=33% Similarity=0.557 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQG-----------HVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|...|||++-....+ ...=+......|.+.|++|+++++.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 666689976654321 2245666778888999999999975
No 210
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=30.67 E-value=93 Score=28.27 Aligned_cols=30 Identities=3% Similarity=-0.214 Sum_probs=20.8
Q ss_pred CCccEEEecCCcch-HHHHHHHcCCceEEEc
Q 010617 106 EKIDCFIADGNIGW-SMEIAKKMNVRGAVFW 135 (506)
Q Consensus 106 ~~~DlvV~D~~~~~-~~~~A~~lgIP~v~~~ 135 (506)
.++|+||.-.++.. .-.+.+.++||++.+.
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi~ 98 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGIA 98 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECcc
Confidence 57899997776663 3455566799998753
No 211
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=30.60 E-value=70 Score=28.27 Aligned_cols=45 Identities=11% Similarity=-0.076 Sum_probs=32.6
Q ss_pred hhhhhhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEE
Q 010617 299 CLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLW 343 (506)
Q Consensus 299 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 343 (506)
+.+|+.+...+.++||..+|......+.++.+.++|+++|..+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 445654444467999988875444557888899999999997654
No 212
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=30.52 E-value=2.6e+02 Score=26.00 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.|+++++.++.| =-.++|++|+++|++|.++..
T Consensus 27 gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 27 GRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467778755432 346899999999999998854
No 213
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=30.42 E-value=1.2e+02 Score=27.87 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.|+.+++.++.| =-.++|++|+++|++|.++..
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 467778755543 346899999999999998754
No 214
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=30.32 E-value=38 Score=26.41 Aligned_cols=46 Identities=11% Similarity=0.083 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCC-ccCHHHHHHHHHHHHhC-CC-eEEEEeCCcchhHH
Q 010617 1 MSRPRVLVMPAPA-QGHVIPLLEFSQCLAKH-GF-RVTFVNTDYNHKRV 46 (506)
Q Consensus 1 m~~~~il~~~~~~-~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~~~~v 46 (506)
|+|.-|++...|. .......+.+|..+++. || +|+++-........
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 4443333333333 34566789999999999 99 99988775544433
No 215
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=30.31 E-value=76 Score=25.71 Aligned_cols=41 Identities=7% Similarity=0.043 Sum_probs=29.9
Q ss_pred CEEEE-EcCC--CccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010617 4 PRVLV-MPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (506)
Q Consensus 4 ~~il~-~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 44 (506)
.|++| +..+ ........+.+|...++.||+|+++-......
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 45664 4444 34677788899999999999999887764443
No 216
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=30.15 E-value=48 Score=27.01 Aligned_cols=41 Identities=10% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCCCccEEEecCCcc--hHHHHHHHc-------CCceEEEccc
Q 010617 94 EELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPS 137 (506)
Q Consensus 94 ~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 137 (506)
.+.++.+.. .+||+||.|...+ -|..+++.+ ++|++.++..
T Consensus 47 ~~al~~~~~---~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 47 LTALPMLKK---GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HHHHHHHHH---HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred HHHHHHHHh---CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
No 217
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=30.05 E-value=57 Score=29.36 Aligned_cols=41 Identities=12% Similarity=0.337 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 010617 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~ 136 (506)
...++..+++++. .+.|+||.| ..+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~---~G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA---NGTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH---CCCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 4567788888887 789999998 4568899999999999884
No 218
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=30.02 E-value=64 Score=29.99 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.|+++++.++.| =-.++|++|+++|++|.+....
T Consensus 49 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777755442 3468999999999999887654
No 219
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.97 E-value=1.2e+02 Score=24.34 Aligned_cols=51 Identities=6% Similarity=-0.050 Sum_probs=33.0
Q ss_pred cCCcEEeccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCChHH
Q 010617 404 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 460 (506)
Q Consensus 404 ~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~~~ 460 (506)
..+|+|++--..+.. ......+ .|+--.+. +.++.++|.++|++++.....
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~ 124 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRL 124 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHH
Confidence 478988876554433 3333334 37655554 457999999999999864433
No 220
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=29.90 E-value=2e+02 Score=28.74 Aligned_cols=26 Identities=27% Similarity=0.391 Sum_probs=22.2
Q ss_pred CCccEEEecCCcchHHHHHHHcCCceEEE
Q 010617 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (506)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgIP~v~~ 134 (506)
.+||++|.+. ....+|+++|||++.+
T Consensus 384 ~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 7999999885 3577899999999985
No 221
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=29.84 E-value=1.3e+02 Score=27.04 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
+.|+++++..+.| =-.++|++|+++|++|.++..
T Consensus 8 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 8 RDAVAVVTGGASG---LGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp --CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred cCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466777755442 346899999999999998876
No 222
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=29.73 E-value=68 Score=26.45 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=33.8
Q ss_pred EEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 5 RVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 5 ~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
+++ ++..+..-.+++.+.+|...++.|++|+++.+......+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 444 55566678889999999999999999999988655544443
No 223
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=29.57 E-value=77 Score=30.91 Aligned_cols=129 Identities=9% Similarity=0.065 Sum_probs=0.0
Q ss_pred cCCCCceEEEEeCccccCCHHHHHHHHHHHhhC--CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhc
Q 010617 305 QQQPSSVVYVSFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLN 382 (506)
Q Consensus 305 ~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~ 382 (506)
..++..|.+|..| .. +..+.++.+. +.+++-++..+ ..-.++..+..-+.-|-...+++.
T Consensus 4 ~~~~~rv~VvG~G-~g-------~~h~~a~~~~~~~~elvav~~~~----------~~~a~~~a~~~gv~~~~~~~~l~~ 65 (372)
T 4gmf_A 4 ASPKQRVLIVGAK-FG-------EMYLNAFMQPPEGLELVGLLAQG----------SARSRELAHAFGIPLYTSPEQITG 65 (372)
T ss_dssp ---CEEEEEECST-TT-------HHHHHTTSSCCTTEEEEEEECCS----------SHHHHHHHHHTTCCEESSGGGCCS
T ss_pred CCCCCEEEEEehH-HH-------HHHHHHHHhCCCCeEEEEEECCC----------HHHHHHHHHHhCCCEECCHHHHhc
Q ss_pred CCCcceEEe----ccCchh--HHHHHHcCCcEEe-ccCcccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHH
Q 010617 383 HPSIACFLS----HCGWNS--TMEGVSNGIPFLC-WPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (506)
Q Consensus 383 h~~v~~~It----HgG~~s--v~eal~~GvP~v~-~P~~~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~v 454 (506)
..++.++.+ |++.+. +.+||.+|++++| -|+..|+-.-..++.++.|+=..+.. ....-..+++.+...
T Consensus 66 ~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~---~yr~~p~vr~~i~~~ 141 (372)
T 4gmf_A 66 MPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINT---FYPHTRAGRTWLRDA 141 (372)
T ss_dssp CCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEEC---SGGGSHHHHHHHHHH
T ss_pred CCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcC---cccCCHHHHHHHHHH
No 224
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=29.52 E-value=1.3e+02 Score=29.72 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|...|||++- .|. -.+.+++++.+.|++|.++.+.
T Consensus 4 m~~~kiLI~g---~g~--~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 4 MEIKSILIAN---RGE--IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp TCCCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEEEG
T ss_pred cccceEEEEC---CCH--HHHHHHHHHHHcCCEEEEEEcC
Confidence 4445677743 222 4578999999999999888644
No 225
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=29.24 E-value=64 Score=25.48 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=23.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccch
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSS 138 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------gIP~v~~~~~~ 138 (506)
.+||+||+|...+ .+..+.+.+ ++|.+.++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 7899999998765 355555433 57888776543
No 226
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=29.15 E-value=2.3e+02 Score=24.90 Aligned_cols=95 Identities=11% Similarity=0.141 Sum_probs=51.1
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHH
Q 010617 20 LLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEE 99 (506)
Q Consensus 20 ~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (506)
...+.+.|.++|..+.+++.......+-+.. ....-+.++...+.... .-.+ ...+...++.
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~----gl~~~fd~i~~~~~~~~--~KP~------------p~~~~~a~~~ 161 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAAL----ELREFFTFCADASQLKN--SKPD------------PEIFLAACAG 161 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHT----TCGGGCSEECCGGGCSS--CTTS------------THHHHHHHHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhh----hhccccccccccccccC--CCCc------------HHHHHHHHHH
Confidence 4567788889999998888765544433321 01111222221111110 0011 1123333444
Q ss_pred HhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 010617 100 INSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 100 l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~ 136 (506)
+.- .+-++|+++-. ......|+..|+.+|.+..
T Consensus 162 lg~---~p~e~l~VgDs-~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 162 LGV---PPQACIGIEDA-QAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp HTS---CGGGEEEEESS-HHHHHHHHHHTCEEEEEST
T ss_pred cCC---ChHHEEEEcCC-HHHHHHHHHcCCEEEEECC
Confidence 433 33366666644 5799999999999999754
No 227
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=29.12 E-value=2e+02 Score=25.54 Aligned_cols=101 Identities=10% Similarity=-0.034 Sum_probs=53.6
Q ss_pred hhhhhhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccch-
Q 010617 299 CLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQ- 377 (506)
Q Consensus 299 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq- 377 (506)
+-.+|.++. ..+||-|.. ...+....++....+-++|-++..... ..+++.+ .-....+....+.
T Consensus 37 lg~~LA~~G---~~vVsGGg~----~GiM~aa~~gAl~~GG~tiGVlP~~~~---~~e~~~~----~~~~~~~~~~f~~R 102 (215)
T 2a33_A 37 LGNELVSRN---IDLVYGGGS----IGLMGLVSQAVHDGGRHVIGIIPKTLM---PRELTGE----TVGEVRAVADMHQR 102 (215)
T ss_dssp HHHHHHHTT---CEEEECCCS----SHHHHHHHHHHHHTTCCEEEEEESSCC---------------CCEEEEESSHHHH
T ss_pred HHHHHHHCC---CEEEECCCh----hhHhHHHHHHHHHcCCcEEEEcchHhc---chhhccC----CCCceeecCCHHHH
Confidence 444555543 666665531 245566666666666676666543311 0111111 0112234444453
Q ss_pred hhhhcCCCcceEEeccCchhHHHHHH---------cCCcEEeccC
Q 010617 378 LRVLNHPSIACFLSHCGWNSTMEGVS---------NGIPFLCWPY 413 (506)
Q Consensus 378 ~~lL~h~~v~~~ItHgG~~sv~eal~---------~GvP~v~~P~ 413 (506)
+.++..-+-..++--||.||+-|... +++|++++-.
T Consensus 103 k~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 103 KAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34544334456778899999987752 4899998764
No 228
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=29.02 E-value=2.2e+02 Score=26.13 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.|+++++.++.| =-.++|++|+++|++|.++....
T Consensus 47 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 47 GKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 356777755443 34689999999999998886643
No 229
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=28.89 E-value=60 Score=30.54 Aligned_cols=81 Identities=6% Similarity=-0.042 Sum_probs=47.4
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEE
Q 010617 311 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 390 (506)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~I 390 (506)
.|+++--|-.....+.+..+...|+..+..+.+..... +.... ..+. ++.. ..+++|
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~----------~~~~--~~~~--~~d~vv 68 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---------QGDAT----------KYCQ--EFAS--KVDLII 68 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---------TTHHH----------HHHH--HHTT--TCSEEE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---------cchHH----------HHHH--Hhhc--CCCEEE
Confidence 44444433222224556777888887787776655332 11110 0011 1112 334599
Q ss_pred eccCchhHHHHHH------cCCcEEeccCc
Q 010617 391 SHCGWNSTMEGVS------NGIPFLCWPYF 414 (506)
Q Consensus 391 tHgG~~sv~eal~------~GvP~v~~P~~ 414 (506)
.-||-||+.|++. .++|+.++|..
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 9999999999864 57999999963
No 230
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.69 E-value=77 Score=24.26 Aligned_cols=33 Identities=9% Similarity=0.077 Sum_probs=22.9
Q ss_pred CCccEEEecCCcc--hHHHHHHH----cCCceEEEccch
Q 010617 106 EKIDCFIADGNIG--WSMEIAKK----MNVRGAVFWPSS 138 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~----lgIP~v~~~~~~ 138 (506)
.+||+||.|...+ .+..+.+. .++|.+.++...
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 7899999998765 35555543 368888776543
No 231
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=28.65 E-value=39 Score=30.62 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCc
Q 010617 19 PLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 19 p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
--.++|++|+++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 34678999999999999998864
No 232
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=28.56 E-value=2.6e+02 Score=27.56 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+||++- .|. -.+.+++++.+.|++|..+.+..
T Consensus 8 ~ILI~g---~g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 8 KVLVAN---RGE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp EEEECS---CHH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred EEEEEC---CcH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 777763 232 35678999999999999886643
No 233
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=28.55 E-value=39 Score=28.32 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=27.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.++++++.+. | +.|++.+++.|.++|.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4677777443 3 899999999999999999998 543
No 234
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=28.47 E-value=56 Score=30.29 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=30.4
Q ss_pred CCCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSRPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+-++++.+. -++-|-..-...||..|+++|++|.++=.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 5534555444 3566999999999999999999999986655
No 235
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=28.37 E-value=31 Score=33.04 Aligned_cols=39 Identities=13% Similarity=0.264 Sum_probs=28.5
Q ss_pred CCCCEEEEEcCCCcc-CH----HHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQG-HV----IPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~G-H~----~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+|+||+++.. ++| -. .....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~g-G~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFG-GCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEE-CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeC-CCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 88899998874 444 22 25677899999999999988653
No 236
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=28.35 E-value=69 Score=33.34 Aligned_cols=47 Identities=6% Similarity=0.111 Sum_probs=39.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
+.+||+.+.++-.|-....-++..|..+|++|..+...-..+.+.+.
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~a 144 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRT 144 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 56899999999999999999999999999999999877555554443
No 237
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=28.23 E-value=1.3e+02 Score=27.96 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 467777755543 3468999999999999987643
No 238
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=28.19 E-value=47 Score=30.96 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|..+||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 ~~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 345788888655555 46789999999999998653
No 239
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=28.16 E-value=40 Score=31.27 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=24.8
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+ .++|+++ |+.|.+- .+++++|+++||+|+.++-..
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECCc
Confidence 66 4555554 3445443 467899999999999887653
No 240
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=27.97 E-value=58 Score=30.80 Aligned_cols=42 Identities=21% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHh
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (506)
++||.|+-.|..| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 5788888766666 56789999999999999433344555544
No 241
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.86 E-value=41 Score=31.30 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=25.6
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+ +++|+++ |+.|.+- ..++++|+++||+|+.++-..
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 66 4566655 4555553 567899999999999987653
No 242
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=27.84 E-value=65 Score=29.41 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|.+.++++++.++.| =-.++|++|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 455677888855442 346899999999999987744
No 243
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.84 E-value=3.4e+02 Score=24.48 Aligned_cols=31 Identities=6% Similarity=-0.109 Sum_probs=20.0
Q ss_pred CCccEEEecCCcc----hHHHHHHHcCCceEEEcc
Q 010617 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 106 ~~~DlvV~D~~~~----~~~~~A~~lgIP~v~~~~ 136 (506)
.++|.||.-.... .....+...|||+|.+..
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 60 KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 4788888765433 234455667899888653
No 244
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=27.80 E-value=2.2e+02 Score=26.50 Aligned_cols=38 Identities=18% Similarity=0.371 Sum_probs=31.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010617 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (506)
Q Consensus 6 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 43 (506)
|+++..++-|-..-+..||..|+.+|++|.++..+...
T Consensus 101 i~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 101 IMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 44666667799999999999999999999999887544
No 245
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=27.79 E-value=54 Score=26.10 Aligned_cols=44 Identities=14% Similarity=0.130 Sum_probs=30.8
Q ss_pred CC-CCEEEEEcCCCc-cCH-HHHHHHHHHHHhCC--CeEEEEeCCcchh
Q 010617 1 MS-RPRVLVMPAPAQ-GHV-IPLLEFSQCLAKHG--FRVTFVNTDYNHK 44 (506)
Q Consensus 1 m~-~~~il~~~~~~~-GH~-~p~l~La~~L~~rG--h~Vt~~~~~~~~~ 44 (506)
|+ ++|++|+-+-.. -.. +-.+.+|....++| |+|.++......+
T Consensus 4 ~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 4 MSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred cccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 54 578886554433 332 34678899999999 8999998866655
No 246
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=27.57 E-value=27 Score=33.91 Aligned_cols=40 Identities=8% Similarity=0.208 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHV----IPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+|+||+++..+..+-. .-...++++|.++||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 88899998874332222 34577899999999999988643
No 247
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=27.15 E-value=50 Score=31.14 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=23.8
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|+ +++|| ++ |+.|-+- .+|+++|+++||+|+.+..
T Consensus 2 M~~~~~vl-VT-GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTIL-VT-GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEE-EE-TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEE-Ee-cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 55 34554 44 3444332 5789999999999998864
No 248
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.11 E-value=57 Score=30.03 Aligned_cols=37 Identities=30% Similarity=0.369 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|.+.|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 445567777755543 3467899999999999887654
No 249
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=27.09 E-value=95 Score=23.57 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=30.4
Q ss_pred HHHHHHHhCCh----HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHhccccCCCCC
Q 010617 448 KNKVDQVLGNQ----DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAHNSPV 503 (506)
Q Consensus 448 ~~ai~~vl~d~----~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 503 (506)
...+.++.+|. .+|+.|.+.++.+.+ ++-+..-....-+..|.+-..+.|-|.
T Consensus 20 ~~~L~~I~~D~sVPRNIRraA~ea~~~L~~---e~~~~~vRAAtAIs~LDeISnDPNmP~ 76 (94)
T 2qzg_A 20 SSMLEEIVEDTTVPRNIRAAADNAKNALHN---EEQELIVRSATAIQYLDDISEDPNMPI 76 (94)
T ss_dssp HHHHHHHHTCTTSCHHHHHHHHHHHHHTTC---TTSCHHHHHHHHHHHHHHHTTCTTCCH
T ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHhC---CCcchhHHHHHHHHHHHHhhcCCCCCh
Confidence 33556666776 466666666666655 344445555555555555555566554
No 250
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=27.07 E-value=1.9e+02 Score=25.92 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=25.6
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.|+++++.++. |-+ -.++|++|+++|++|.++....
T Consensus 20 ~k~vlITGas~~~gi--G~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 20 GKVVVVTGASGPKGM--GIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp TCEEEETTCCSSSSH--HHHHHHHHHHTSCEEEECBSSS
T ss_pred CCEEEEECCCCCCCh--HHHHHHHHHHCCCeEEEEeCCc
Confidence 45677775541 333 4689999999999999886543
No 251
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.06 E-value=68 Score=30.65 Aligned_cols=69 Identities=10% Similarity=-0.046 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccCchhHHHHHH
Q 010617 324 QVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVS 403 (506)
Q Consensus 324 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~ 403 (506)
.+.++.+...|+..+..+.+..... +.... .. ...... ...+++|.-||-||+.|++.
T Consensus 41 ~~~~~~i~~~L~~~g~~~~~~~t~~---------~~~a~----------~~-~~~~~~--~~~d~vvv~GGDGTv~~v~~ 98 (337)
T 2qv7_A 41 KRELPDALIKLEKAGYETSAYATEK---------IGDAT----------LE-AERAMH--ENYDVLIAAGGDGTLNEVVN 98 (337)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEECCS---------TTHHH----------HH-HHHHTT--TTCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEecC---------cchHH----------HH-HHHHhh--cCCCEEEEEcCchHHHHHHH
Confidence 3556778888888887665544322 11100 00 011122 23345999999999999853
Q ss_pred ------cCCcEEeccCc
Q 010617 404 ------NGIPFLCWPYF 414 (506)
Q Consensus 404 ------~GvP~v~~P~~ 414 (506)
.++|+.++|..
T Consensus 99 ~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 99 GIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp HHTTCSSCCEEEEEECS
T ss_pred HHHhCCCCCcEEEecCC
Confidence 46899999963
No 252
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=27.03 E-value=3e+02 Score=23.54 Aligned_cols=141 Identities=18% Similarity=0.169 Sum_probs=80.4
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
++.|-|-+||.. +...+++....++..+..+-+.+..- ...|+.+. .|+-... -...+|
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~----------~~~~~a~-~~g~~V-- 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMF----------SYARGAA-ARGLEV-- 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHHH-HHTCCE--
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHH----------HHHHHHH-hCCCCE--
Confidence 345666677633 67888999999999998876655433 55666533 2211111 122334
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCcccch--hhHH-hhhc-cceeeeE-eecCCCCCcCHHHHHHHHHHHhCChH
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQF--LNER-YICD-FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQD 459 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ~--~na~-rv~~-~lG~G~~-l~~~~~~~~~~~~l~~ai~~vl~d~~ 459 (506)
||.-.|. .++..++ --+|++.+|...-.. ..+. -+.. --|+.+. +.. ++-.++.-++..|..+ .|+.
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~Il~~-~d~~ 141 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRMLGA-ANPQ 141 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHHHT-TCHH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHHHhC-CCHH
Confidence 7776664 3555554 569999999753211 1111 1111 0143222 222 1345566666555544 5889
Q ss_pred HHHHHHHHHHHHHhh
Q 010617 460 FKARALELKEKAMSS 474 (506)
Q Consensus 460 ~r~~a~~l~~~~~~~ 474 (506)
++++.+..+++.++.
T Consensus 142 l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 142 LRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988888764
No 253
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=26.99 E-value=98 Score=26.15 Aligned_cols=48 Identities=8% Similarity=0.079 Sum_probs=36.7
Q ss_pred CCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHH
Q 010617 1 MSRPRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (506)
Q Consensus 1 m~~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (506)
|++.++. ++..+..--+++.+-+|..-++.|++|+++-+-.....+.+
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 6655555 55566678889999999999999999999988655554444
No 254
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=26.59 E-value=58 Score=26.09 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=22.6
Q ss_pred CCccEEEecCCcc--hHHHHHHHc---------CCceEEEccc
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM---------NVRGAVFWPS 137 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l---------gIP~v~~~~~ 137 (506)
.+||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 6899999998665 366665544 2788877654
No 255
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=26.58 E-value=84 Score=25.83 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.++|+++-. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 467887743 4433 557899999999999987643
No 256
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=26.41 E-value=97 Score=24.03 Aligned_cols=39 Identities=8% Similarity=0.104 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|+..|||+++..+.|==.-.-.+-+.+.++|.++.+-..
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 777789988866554334555888888889988766544
No 257
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=26.40 E-value=2.9e+02 Score=23.15 Aligned_cols=103 Identities=7% Similarity=0.070 Sum_probs=52.5
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcc--hhHHHHhhhcCCCCCCCeEEEecCCCCC-CCCCccCHHHHHHHHHHhCcHHHHHH
Q 010617 20 LLEFSQCLAKHGFRVTFVNTDYN--HKRVVESLQGKNYLGEQIHLVSIPDGME-PWEDRNDLGKLIEKCLQVMPGKLEEL 96 (506)
Q Consensus 20 ~l~La~~L~~rGh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 96 (506)
...+.+.|.++|+.+.++|.... ...+...+... ....-+..+-...... .....+--. ..+..+
T Consensus 39 ~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~KP~p-----------~~~~~~ 106 (189)
T 3ib6_A 39 AKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF-GIIDYFDFIYASNSELQPGKMEKPDK-----------TIFDFT 106 (189)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT-TCGGGEEEEEECCTTSSTTCCCTTSH-----------HHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc-CchhheEEEEEccccccccCCCCcCH-----------HHHHHH
Confidence 45778899999999999997543 12232222111 0011233332222110 000111111 223344
Q ss_pred HHHHhcCCCCCccEEEecCCcchHHHHHHHcCCceEEEccc
Q 010617 97 IEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPS 137 (506)
Q Consensus 97 l~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~ 137 (506)
++.+.- .+-++++++-....-...|+..|+.++.+...
T Consensus 107 ~~~~~~---~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~ 144 (189)
T 3ib6_A 107 LNALQI---DKTEAVMVGNTFESDIIGANRAGIHAIWLQNP 144 (189)
T ss_dssp HHHHTC---CGGGEEEEESBTTTTHHHHHHTTCEEEEECCT
T ss_pred HHHcCC---CcccEEEECCCcHHHHHHHHHCCCeEEEECCc
Confidence 444432 33356665544357788999999999987543
No 258
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=26.28 E-value=83 Score=29.84 Aligned_cols=74 Identities=14% Similarity=0.256 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhc-CCCcceEEeccCchhHHH
Q 010617 322 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLN-HPSIACFLSHCGWNSTME 400 (506)
Q Consensus 322 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~-h~~v~~~ItHgG~~sv~e 400 (506)
.+.+..+.+.+++.+...+.||...+..+ ..++.++++...+-+ +|.. ||-+.....++-
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------------a~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~ 124 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------------CGQLLPGLDWGRLQAASPRP--LIGFSDISVLLS 124 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------------GGGGTTTCCHHHHHHSCCCC--EEECGGGHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------------HHHHhhccchhhhhccCCCE--EEEEchhHHHHH
Confidence 45667888999999999999998876521 122556776666666 7887 999999999999
Q ss_pred HHH-cCCcEEeccCc
Q 010617 401 GVS-NGIPFLCWPYF 414 (506)
Q Consensus 401 al~-~GvP~v~~P~~ 414 (506)
|++ .|++.+-=|..
T Consensus 125 al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 125 AFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHTTCCEEECCCG
T ss_pred HHHHcCCcEEECHhh
Confidence 987 48887776643
No 259
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=26.25 E-value=1.4e+02 Score=27.59 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCcc--hHHHHHHHcCCceEEEcc
Q 010617 93 LEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgIP~v~~~~ 136 (506)
+.++++.++. .+..+|+++.... .+-.+|+..|++.+.+.+
T Consensus 215 l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 215 LTEIQEFVKT---YKVKTIFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp HHHHHHHHHH---TTCCCEEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred HHHHHHHHHH---cCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 4555555555 7899999998766 577889999999987643
No 260
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=26.20 E-value=66 Score=28.72 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.+.++++..+.| =-.++++.|+++|++|.++.-.
T Consensus 6 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 4456667644332 3468899999999999988654
No 261
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=26.18 E-value=73 Score=31.01 Aligned_cols=40 Identities=13% Similarity=0.127 Sum_probs=33.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 44 (506)
-+++.-.|+.|-..-.+.++..++++|..|.|++.+...+
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 3556677888999999999999999999999999876443
No 262
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=26.01 E-value=62 Score=30.37 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 38 (506)
|+ .||.|+=.+..|. ++|+.|+++||+|++..
T Consensus 4 Ms-~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 4 MS-EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CC-CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CC-CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 44 3788988777774 68999999999998863
No 263
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.01 E-value=1e+02 Score=25.29 Aligned_cols=39 Identities=21% Similarity=0.321 Sum_probs=27.1
Q ss_pred CCEEEE-EcCCCccCH--HHHHHHHHHHHhCCCeE-EEEeCCc
Q 010617 3 RPRVLV-MPAPAQGHV--IPLLEFSQCLAKHGFRV-TFVNTDY 41 (506)
Q Consensus 3 ~~~il~-~~~~~~GH~--~p~l~La~~L~~rGh~V-t~~~~~~ 41 (506)
+++++| +..+-+|+- .-.+.+|.++++.||+| .++-...
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 467774 555555554 44577899999999999 7765543
No 264
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=25.92 E-value=3e+02 Score=23.23 Aligned_cols=141 Identities=13% Similarity=0.135 Sum_probs=78.9
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcce
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~ 388 (506)
++.|-|-+||. .+.+.+++....++..+..+-..+..- ...|+.+. .|+.. .....+++
T Consensus 3 ~~~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~----------~~~~~---a~~~g~~V 61 (163)
T 3ors_A 3 AMKVAVIMGSS--SDWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMV----------QFASE---ARERGINI 61 (163)
T ss_dssp CCCEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHH---TTTTTCCE
T ss_pred CCeEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHH----------HHHHH---HHhCCCcE
Confidence 34566667763 367888999999999998876655433 55666533 11111 11112334
Q ss_pred EEeccCc----hhHHHHHHcCCcEEeccCcccch---h---hHHhhhccceeeeE-eecCCCCCcCHHHHHHHHHHHhCC
Q 010617 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQF---L---NERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQVLGN 457 (506)
Q Consensus 389 ~ItHgG~----~sv~eal~~GvP~v~~P~~~DQ~---~---na~rv~~~lG~G~~-l~~~~~~~~~~~~l~~ai~~vl~d 457 (506)
||.=.|. .++..++ --+|++.+|...... + -.-.+-. |+.+. +..++.+-.++.-++..|..+ .|
T Consensus 62 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--GvPVatV~I~~a~~~nAa~lAa~Il~~-~d 137 (163)
T 3ors_A 62 IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPG--GIPVATTAIGAAGAKNAGILAARMLSI-QN 137 (163)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHHHT-TC
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCC--CCceEEEEcCCcccHHHHHHHHHHHhC-CC
Confidence 7776664 3555554 569999999754311 1 1111221 44222 222100233455555444443 58
Q ss_pred hHHHHHHHHHHHHHHhh
Q 010617 458 QDFKARALELKEKAMSS 474 (506)
Q Consensus 458 ~~~r~~a~~l~~~~~~~ 474 (506)
+.++++.+..+++.++.
T Consensus 138 ~~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 138 PSLVEKLNQYESSLIQK 154 (163)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999988888764
No 265
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=25.88 E-value=43 Score=27.53 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=28.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
.++++++.+. =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4677877333 4899999999999999999998 543
No 266
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.88 E-value=50 Score=24.16 Aligned_cols=49 Identities=18% Similarity=0.122 Sum_probs=29.8
Q ss_pred HcCCcEEeccCcccchhhHH---hhhccceeeeEeecCCCCCcCHHHHHHHHHHHhC
Q 010617 403 SNGIPFLCWPYFGDQFLNER---YICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (506)
Q Consensus 403 ~~GvP~v~~P~~~DQ~~na~---rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~ 456 (506)
-+|+|+++.--.+.|.+.-. ...+. |+.--+- +..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhh----ccCCHHHHHHHHHHHHH
Confidence 36778777666555543211 12232 6665444 35689999999988873
No 267
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=25.75 E-value=73 Score=30.57 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccCchhHHHHH
Q 010617 323 DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGV 402 (506)
Q Consensus 323 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~~sv~eal 402 (506)
+.+..+.+.+++.+...+.||...+..+ ..++.++++...|-++|.. ||-+.....++-||
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 4566888999999999999998876521 1225566766666677777 88888888888888
Q ss_pred H--cCCcEEeccC
Q 010617 403 S--NGIPFLCWPY 413 (506)
Q Consensus 403 ~--~GvP~v~~P~ 413 (506)
+ .|+..+-=|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 7 4787776665
No 268
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=25.43 E-value=2.8e+02 Score=22.72 Aligned_cols=23 Identities=13% Similarity=0.173 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcc
Q 010617 20 LLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 20 ~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
...+.+.|.++|+.+.++|....
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCc
Confidence 46778899999999999998754
No 269
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=25.41 E-value=1.2e+02 Score=23.57 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=28.8
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCC
Q 010617 311 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPD 348 (506)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 348 (506)
.||+-|.| +++.++.++.-+.+.|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777754 89999999999999999999998654
No 270
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=25.35 E-value=3.8e+02 Score=24.87 Aligned_cols=102 Identities=11% Similarity=0.064 Sum_probs=64.8
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHHHHc
Q 010617 327 FQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSN 404 (506)
Q Consensus 327 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~ 404 (506)
-..+++.++..+..+++..+-. .-+|+.+.+..+.++. +. +.+|. ..|.+.+..|+.+
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy~------~il~~~~l~~~~~~~iNiHpSlLP~--------------~rG~~p~~~A~~~ 214 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARYM------QILSDEMSARLAGRCINIHHSFLPG--------------FKGAKPYHQAFDR 214 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSCC------SCCCHHHHHHTTTSEEEEEEECSSC--------------CCSSCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEhhhhh------hhCCHHHHhhhcCCeEEeCcccccC--------------CCCchHHHHHHHc
Confidence 3457777777778877777544 5677887766654443 33 33332 3588999999999
Q ss_pred CCcEEeccCc--ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 405 GIPFLCWPYF--GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 405 GvP~v~~P~~--~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
|+....+-.+ .+..+-+..+.. --+.+. ..-|.++|.+.+.++-
T Consensus 215 G~~~~G~Tvh~v~~~~D~GpIi~Q---~~v~i~----~~dt~~~L~~r~~~~e 260 (288)
T 3obi_A 215 GVKLIGATAHYVTSALDEGPIIDQ---DVERIS----HRDTPADLVRKGRDIE 260 (288)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEECCCCcCCCeEEE---EEEecC----CCCCHHHHHHHHHHHH
Confidence 9999877754 244444444432 223332 3458899988877664
No 271
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=25.26 E-value=3.3e+02 Score=25.82 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
-|+++++..+.| =-.++|++|+++|++|.++.-..
T Consensus 45 gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 45 GCTVFITGASRG---IGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 367777755543 33688999999999999987643
No 272
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=25.10 E-value=41 Score=31.44 Aligned_cols=26 Identities=8% Similarity=-0.009 Sum_probs=22.3
Q ss_pred ceEEeccCchhHHHHHHc----CCcEEecc
Q 010617 387 ACFLSHCGWNSTMEGVSN----GIPFLCWP 412 (506)
Q Consensus 387 ~~~ItHgG~~sv~eal~~----GvP~v~~P 412 (506)
+++|.-||-||+.+++.. ++|++.++
T Consensus 65 D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 65 DLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp SEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 449999999999999743 78999887
No 273
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=25.02 E-value=54 Score=31.67 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 37 (506)
.+||+++=.+--| +.+|..|+++||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 4788887544334 77899999999999998
No 274
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=24.96 E-value=1.6e+02 Score=26.60 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|.++++.++.| + -.++|+.|+++|++|.+....
T Consensus 27 k~vlVTGas~g-I--G~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 27 RSVLVTGASKG-I--GRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56677754432 2 468999999999999876653
No 275
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=24.85 E-value=3.2e+02 Score=25.32 Aligned_cols=101 Identities=9% Similarity=0.048 Sum_probs=63.2
Q ss_pred HHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHHHHcC
Q 010617 328 QELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNG 405 (506)
Q Consensus 328 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~G 405 (506)
..+++.++..+..+++..+-. .-+|+.+.+..+.++. +. +.+|. ..|.+.+..|+.+|
T Consensus 155 ~~~~~~l~~~~~Dlivlagym------~il~~~~l~~~~~~~iNiHpSlLP~--------------~rG~~p~~~Ai~~G 214 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM------QILSDDLSAFLSGRCINIHHSFLPG--------------FKGAKPYHQAHTRG 214 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------SCCCHHHHHHHTTSEEEEESSCTTT--------------TCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEhhhhh------hhcCHHHHhhccCCeEEECcccccC--------------CCCchHHHHHHHcC
Confidence 456777777777777776544 5677777766654443 33 33332 35889999999999
Q ss_pred CcEEeccCcc--cchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 406 IPFLCWPYFG--DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 406 vP~v~~P~~~--DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
+....+-.+. +..+-+..+.. --+.+. ..-|.++|.+.+.++-
T Consensus 215 ~k~tG~Tvh~v~~~lD~GpIi~Q---~~v~i~----~~dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 215 VKLIGATAHFVTADLDEGPIIAQ---DVEHVS----HRDSAEDLVRKGRDIE 259 (287)
T ss_dssp CSEEEEEEEECCSSSSCCCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCcCCCEEEE---EEEecC----CCCCHHHHHHHHHHHH
Confidence 9998877542 33333333322 222232 3458899988877664
No 276
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=24.81 E-value=1.1e+02 Score=20.30 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=29.4
Q ss_pred ecCCCCCcCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 010617 435 DRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 492 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~ai~~vl~d~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 492 (506)
+.++++.++.+++...+..+- ..-.-.++.+.++. .+..|...-..++|++.+
T Consensus 10 D~d~~G~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~-~D~~~~g~i~~~ef~~~~ 62 (66)
T 3li6_A 10 DVNGDGAVSYEEVKAFVSKKR----AIKNEQLLQLIFKS-IDADGNGEIDQNEFAKFY 62 (66)
T ss_dssp CTTCSSSCCHHHHHHHHHHHH----HHHHHHHHHHHHHH-HCTTCSSSCCHHHHHHHH
T ss_pred CCCCCCcccHHHHHHHHHHcc----CCCcHHHHHHHHHH-HCCCCCCCCCHHHHHHHH
Confidence 345568899999999998773 12222334444443 233444444455555544
No 277
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=24.66 E-value=95 Score=24.50 Aligned_cols=42 Identities=12% Similarity=0.002 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCCcch
Q 010617 1 MSRPRVLVMPAPAQGHV--IPLLEFSQCLAKHGFRVTFVNTDYNH 43 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~~ 43 (506)
|+|.=| ++..+-+|+- .-.+.+|.++.+.||+|.++-.....
T Consensus 1 Mkk~~~-vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV 44 (119)
T 2d1p_B 1 MKRIAF-VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV 44 (119)
T ss_dssp CCCEEE-EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGG
T ss_pred CcEEEE-EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHH
Confidence 655433 3444444554 66788999999999999888665433
No 278
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=24.62 E-value=3.6e+02 Score=23.76 Aligned_cols=102 Identities=7% Similarity=-0.021 Sum_probs=64.3
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHHHH
Q 010617 326 QFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVS 403 (506)
Q Consensus 326 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~ 403 (506)
+-..+++.++..+..+++..+-. .-+|+.+.+..+..+. +. +.+| ...|...+..|+.
T Consensus 77 ~d~~~~~~l~~~~~Dlivlagy~------~iL~~~~l~~~~~~~iNiHpSLLP--------------~yrG~~pi~~Ai~ 136 (215)
T 3da8_A 77 WDVAITAATAAHEPDLVVSAGFM------RILGPQFLSRFYGRTLNTHPALLP--------------AFPGTHGVADALA 136 (215)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECC------SCCCHHHHHHHTTTEEEEESSCTT--------------SSCSTTHHHHHHH
T ss_pred hhHHHHHHHHhhCCCEEEEcCch------hhCCHHHHhhccCCeEEeCccccc--------------CCCCchHHHHHHH
Confidence 34457788888888888777644 5677777766554333 22 2222 2348899999999
Q ss_pred cCCcEEeccCc--ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHH
Q 010617 404 NGIPFLCWPYF--GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (506)
Q Consensus 404 ~GvP~v~~P~~--~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~v 454 (506)
+|+....+-.+ .+..+.+..+.. .-+.+. ..-|.++|.+.+.++
T Consensus 137 ~G~~~tGvTvh~v~~~lD~G~Ii~Q---~~v~I~----~~dt~~~L~~rl~~~ 182 (215)
T 3da8_A 137 YGVKVTGATVHLVDAGTDTGPILAQ---QPVPVL----DGDDEETLHERIKVT 182 (215)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred cCCCeEEEEEEEEcCCCCCCCEEEE---EEeecC----CCCCHHHHHHHHHHH
Confidence 99999877754 344444444432 222332 345888888877765
No 279
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.53 E-value=1.3e+02 Score=26.17 Aligned_cols=100 Identities=8% Similarity=-0.075 Sum_probs=52.8
Q ss_pred hhhhhhcCCCCceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccc-h
Q 010617 299 CLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAP-Q 377 (506)
Q Consensus 299 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vp-q 377 (506)
+-++|.++. ..+|+-|. +...+....++....+-+++=++.... ...+.+... -+...+++... -
T Consensus 36 lg~~la~~g---~~lv~GGG----~~GlM~a~~~ga~~~GG~viGv~p~~l---~~~e~~~~~----~~~~i~~~~~~~R 101 (189)
T 3sbx_A 36 VGAAIAARG---WTLVWGGG----HVSAMGAVSSAARAHGGWTVGVIPKML---VHRELADHD----ADELVVTETMWER 101 (189)
T ss_dssp HHHHHHHTT---CEEEECCB----CSHHHHHHHHHHHTTTCCEEEEEETTT---TTTTTBCTT----CSEEEEESSHHHH
T ss_pred HHHHHHHCC---CEEEECCC----ccCHHHHHHHHHHHcCCcEEEEcCchh---hhcccCCCC----CCeeEEcCCHHHH
Confidence 444555443 55555543 225667777777666666665554321 011111111 12223444443 3
Q ss_pred hhhh-cCCCcceEEeccCchhHHHHH---------HcCCcEEeccC
Q 010617 378 LRVL-NHPSIACFLSHCGWNSTMEGV---------SNGIPFLCWPY 413 (506)
Q Consensus 378 ~~lL-~h~~v~~~ItHgG~~sv~eal---------~~GvP~v~~P~ 413 (506)
+.+| .+++ ..++--||.||+-|.. .+++|++.+=.
T Consensus 102 k~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 102 KQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3343 3444 4577788899988874 36899998753
No 280
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.52 E-value=2.2e+02 Score=23.74 Aligned_cols=95 Identities=14% Similarity=0.071 Sum_probs=59.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHH-hhhcCCCCCCCeEEEecCCCCCCCCCccCHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVE-SLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (506)
.+|++.. ...+=.-++.+|+.|.+. ||++. .+....+.+++ . |+....+..+. .+
T Consensus 12 g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~k~~-eG-------- 69 (152)
T 1b93_A 12 KHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAMLSGP-MG-------- 69 (152)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEECCGG-GT--------
T ss_pred CEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEEecC-CC--------
Confidence 3444443 334556789999999998 99654 56667777777 5 55544443211 00
Q ss_pred HHHHHHHhCcHHHHHHHHHHhcCCCCCccEEEecCC--cc--------hHHHHHHHcCCceEEE
Q 010617 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN--IG--------WSMEIAKKMNVRGAVF 134 (506)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~--~~--------~~~~~A~~lgIP~v~~ 134 (506)
..+.+.+++.. .+.|+||.-.- .. .-..+|-.+|||+++-
T Consensus 70 --------G~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 70 --------GDQQVGALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp --------HHHHHHHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred --------CCchHHHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 12235555655 89999996432 11 2567888999999983
No 281
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.49 E-value=93 Score=28.71 Aligned_cols=39 Identities=10% Similarity=0.076 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 010617 2 SRPRVLVMPAPAQ-GHVI---PLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 2 ~~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
-+++|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 0467888874432 2222 4468999999999999998765
No 282
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=24.44 E-value=4e+02 Score=24.73 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=63.2
Q ss_pred HHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHHHHcC
Q 010617 328 QELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNG 405 (506)
Q Consensus 328 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~G 405 (506)
..+++.++..+..+++..+-. .-+|+.+.+..+.++. +. +.+|. ..|.+.+..|+.+|
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~------~il~~~~l~~~~~~~iNiHpSlLP~--------------~rG~~p~~~Ai~~G 220 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYM------QVLSPEASARLANRAINIHHSFLPG--------------FKGAKPYHQAHARG 220 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------SCCCHHHHHHTTTSEEEEEEECSSC--------------CCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEecCch------hhCCHHHHhhhcCCeEEeCCCcCcC--------------CCCccHHHHHHHcC
Confidence 456777777777777776543 5677777766554443 33 33332 35889999999999
Q ss_pred CcEEeccCc--ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 406 IPFLCWPYF--GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 406 vP~v~~P~~--~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
+....+-.+ .+..+-+..+.. --+.+. ..-|.++|.+.+.++-
T Consensus 221 ~~~~G~Tvh~v~~~lD~G~Ii~Q---~~v~i~----~~dt~~~L~~r~~~~e 265 (292)
T 3lou_A 221 VKLIGATAHFVTDDLDEGPIIEQ---VVERVD----HSYRPEQLLAVGRDVE 265 (292)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCcCCCEEEE---EEEEcC----CCCCHHHHHHHHHHHH
Confidence 999887754 234444444422 223332 3458899888887663
No 283
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=24.40 E-value=1.2e+02 Score=29.18 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=32.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 43 (506)
-+++.-.|+.|-..-.+.++..++++|..|.|++.+...
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~ 103 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHAL 103 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 355677788899999999999999999999999986543
No 284
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=24.19 E-value=1e+02 Score=23.68 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=23.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSSA 139 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----gIP~v~~~~~~~ 139 (506)
.+||+||.|...+ .+..+.+.+ ++|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 6899999997654 355554443 588888766543
No 285
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=24.13 E-value=37 Score=32.81 Aligned_cols=38 Identities=8% Similarity=0.109 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEe
Q 010617 1 MSRPRVLVMPAPAQG-H---VIPLLEFSQCLAKHGFRVTFVN 38 (506)
Q Consensus 1 m~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~ 38 (506)
|+|.||.++..|..+ | +.-...++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 899999988543222 3 3345578899999999998874
No 286
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=23.89 E-value=2.4e+02 Score=25.07 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
+.++++..+ |-+ -.++++.|+++|++|.++.....
T Consensus 5 k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 5 KTALVTGST-SGI--GLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CEEEESSCS-SHH--HHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeCCch
Confidence 455666433 322 46899999999999998765443
No 287
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=23.81 E-value=55 Score=31.07 Aligned_cols=37 Identities=14% Similarity=0.032 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|++++||++ |+.|.+- ..|+++|+++||+|+.++-..
T Consensus 8 M~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 444566655 3555443 568899999999999998754
No 288
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=23.76 E-value=4.1e+02 Score=24.02 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEecCCcc---hHHHHHHHcCCceEE
Q 010617 90 PGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAV 133 (506)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgIP~v~ 133 (506)
....+.+++.++. -.+++.|..+. .+..+|+..|+|++.
T Consensus 114 ~~~m~~vm~~l~~-----~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE-----KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH-----TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH-----CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4556777777765 35999998754 689999999999988
No 289
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=23.70 E-value=93 Score=24.46 Aligned_cols=32 Identities=9% Similarity=0.045 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccc
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPS 137 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 137 (506)
.+||+||+|...+ .+..+.+.+ .+|.+.++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 6899999998655 355555443 5788877654
No 290
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.63 E-value=96 Score=25.04 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHH-------cCCceEEEccc
Q 010617 106 EKIDCFIADGNIG--WSMEIAKK-------MNVRGAVFWPS 137 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~-------lgIP~v~~~~~ 137 (506)
.+||+||+|.... .+..+++. -++|++.++..
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 7899999998655 35554443 35788887654
No 291
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=23.49 E-value=4e+02 Score=24.54 Aligned_cols=79 Identities=13% Similarity=0.085 Sum_probs=50.7
Q ss_pred CeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHHHhcCCCCCccEE
Q 010617 32 FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCF 111 (506)
Q Consensus 32 h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~Dlv 111 (506)
-+..+++++.+.-..+.+ |+....+... + . +-....+.++++.++. .+..+|
T Consensus 190 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~---~-~------------eps~~~l~~l~~~ik~---~~v~~I 241 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDY---------NLVQIPIEVE---G-Q------------EPSAQELKQLIDTAKE---NNLTMV 241 (291)
T ss_dssp CCEEEESSCCCHHHHHHT---------TCEEEESCBT---T-B------------CCCHHHHHHHHHHHHT---TTCCEE
T ss_pred CCEEEEECCchHHHHHHC---------CCEEeecccC---C-C------------CCCHHHHHHHHHHHHH---cCCCEE
Confidence 344455556655555555 6777665321 1 1 1123345566666666 889999
Q ss_pred EecCCcc--hHHHHHHHcCCceEEEccch
Q 010617 112 IADGNIG--WSMEIAKKMNVRGAVFWPSS 138 (506)
Q Consensus 112 V~D~~~~--~~~~~A~~lgIP~v~~~~~~ 138 (506)
+++.... .+-.+|+..|++.+.+.+..
T Consensus 242 f~e~~~~~~~~~~ia~~~g~~v~~ld~l~ 270 (291)
T 1pq4_A 242 FGETQFSTKSSEAIAAEIGAGVELLDPLA 270 (291)
T ss_dssp EEETTSCCHHHHHHHHHHTCEEEEECTTC
T ss_pred EEeCCCChHHHHHHHHHcCCeEEEEcCch
Confidence 9998666 57788999999998876654
No 292
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=23.49 E-value=1.2e+02 Score=28.90 Aligned_cols=68 Identities=10% Similarity=-0.091 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeEEEeccchhhhhcCCCcceEEeccCchhHHHHH--
Q 010617 325 VQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGV-- 402 (506)
Q Consensus 325 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~v~~~vpq~~lL~h~~v~~~ItHgG~~sv~eal-- 402 (506)
+..+.+...|+..+..+.+..... +.... ..+ ...+.... +++|.-||-||+.|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~---------~~~~~----------~~~-~~~~~~~~--d~vvv~GGDGTl~~v~~~ 101 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWE---------KGDAA----------RYV-EEARKFGV--ATVIAGGGDGTINEVSTA 101 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCS---------TTHHH----------HHH-HHHHHHTC--SEEEEEESHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecC---------cchHH----------HHH-HHHHhcCC--CEEEEEccchHHHHHHHH
Confidence 556778888888888876655322 11110 000 11222233 4499999999999985
Q ss_pred ------HcCCcEEeccCc
Q 010617 403 ------SNGIPFLCWPYF 414 (506)
Q Consensus 403 ------~~GvP~v~~P~~ 414 (506)
..++|+.++|..
T Consensus 102 l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 102 LIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHCCSSCCCEEEEEECS
T ss_pred HhhcccCCCCeEEEecCc
Confidence 357899999963
No 293
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=23.34 E-value=89 Score=28.81 Aligned_cols=58 Identities=22% Similarity=0.227 Sum_probs=37.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHHHhhhcCCCCCCCeEEEecC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP 66 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~ 66 (506)
+||||+.==-+. |---+.+|+++|.+ +|+|+++.+...+....... .....+++....
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~ 68 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL----TLNAPLHIKNLE 68 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC----CCSSCEEEEECT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce----ecCCCeEEEEec
Confidence 588887763333 44567888899876 89999999987776554332 122345555543
No 294
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=23.16 E-value=1.2e+02 Score=29.31 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=30.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010617 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (506)
Q Consensus 6 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 43 (506)
++++-.++.|-..-++.++..+...|..|.|+..+...
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~ 101 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHAL 101 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 34555677789999999999999999999999887543
No 295
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.13 E-value=4.4e+02 Score=24.40 Aligned_cols=101 Identities=11% Similarity=0.036 Sum_probs=62.7
Q ss_pred HHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHHHHcC
Q 010617 328 QELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNG 405 (506)
Q Consensus 328 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~G 405 (506)
..+++.++..+..+++..+-. .-+|+.+.+..+.++. +. +.+|. ..|.+.+..|+.+|
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~------~il~~~~l~~~~~~~iNiHpSlLP~--------------~rG~~p~~~Ai~~G 215 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYM------QVLSPELCRRLDGWAINIHHSLLPG--------------FKGAKPYHQAYNKG 215 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------SCCCHHHHHHTTTSEEEEEECSSTT--------------CCCSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEecccc------cccCHHHHhhhcCCeEEeccccccC--------------CCCccHHHHHHHcC
Confidence 456777777777777776543 5677777766554443 33 33332 34889999999999
Q ss_pred CcEEeccCcc--cchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 406 IPFLCWPYFG--DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 406 vP~v~~P~~~--DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
+....+-.+. +..+-+..+.. --+.+. ..-|.++|.+.+.++-
T Consensus 216 ~~~~G~Tvh~v~~~lD~GpIi~Q---~~~~i~----~~dt~~~L~~r~~~~e 260 (286)
T 3n0v_A 216 VKMVGATAHYINNDLDEGPIIAQ---GVEVVD----HSHYPEDLIAKGRDIE 260 (286)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCceeEE---EEEEcC----CCCCHHHHHHHHHHHH
Confidence 9998877542 33444433322 222332 3458888888877664
No 296
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=23.12 E-value=77 Score=29.69 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+.++||+. |+.|.+ -.+|+++|+++||+|+.+.-..
T Consensus 1 m~~~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 1 MSGKRALIT--GIRGQD--GAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECSCC
T ss_pred CCCCEEEEE--CCCChH--HHHHHHHHHHCCCEEEEEECCC
Confidence 666666654 344444 3578999999999999886543
No 297
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=23.06 E-value=89 Score=28.52 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=25.5
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+ +.++++++.++ |-+ -.++|++|+++|++|.++...
T Consensus 1 M~~~~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 1 MSESAKVWLVTGAS-SGF--GRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp ---CCCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCcEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 55 45677777544 322 357899999999999888654
No 298
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=22.94 E-value=1.6e+02 Score=27.48 Aligned_cols=32 Identities=13% Similarity=0.281 Sum_probs=19.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNT 39 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~ 39 (506)
++||+ + |+.|.+- ..|+++|+++| ++|+.+..
T Consensus 25 ~~vlV-t-GatG~iG--~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 25 MNILV-T-GGAGFIG--SNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp EEEEE-E-TTTSHHH--HHHHHHHHHHCTTEEEEEEEC
T ss_pred CeEEE-E-CCccHHH--HHHHHHHHhhCCCcEEEEEec
Confidence 45544 3 4555443 47899999999 55555543
No 299
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.86 E-value=43 Score=31.66 Aligned_cols=28 Identities=18% Similarity=0.113 Sum_probs=23.3
Q ss_pred cceEEeccCchhHHHHHHc----CCcEEeccC
Q 010617 386 IACFLSHCGWNSTMEGVSN----GIPFLCWPY 413 (506)
Q Consensus 386 v~~~ItHgG~~sv~eal~~----GvP~v~~P~ 413 (506)
++++|.-||-||+.+++.. ++|++.++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3449999999999999754 899998873
No 300
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=22.83 E-value=83 Score=29.32 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=30.9
Q ss_pred CCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+++++ |..-|+-|-..-...||..|+++|++|.++=.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45555 5555566999999999999999999999985543
No 301
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=22.62 E-value=51 Score=32.42 Aligned_cols=34 Identities=21% Similarity=0.472 Sum_probs=25.1
Q ss_pred hhhhhcCCCcceEEeccCchhHHHHHHc----CC-cEEecc
Q 010617 377 QLRVLNHPSIACFLSHCGWNSTMEGVSN----GI-PFLCWP 412 (506)
Q Consensus 377 q~~lL~h~~v~~~ItHgG~~sv~eal~~----Gv-P~v~~P 412 (506)
..++-..+++ +|+=||-||+..|+.. ++ |++.+.
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN 146 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFA 146 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEE
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEE
Confidence 3444444555 9999999999999654 67 788776
No 302
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=22.53 E-value=74 Score=28.75 Aligned_cols=40 Identities=23% Similarity=0.369 Sum_probs=31.6
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 3 RPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 3 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
+++++.+. -++-|-..-...||..|+++|++|.++=.+..
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 56666443 45668999999999999999999999976553
No 303
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=22.52 E-value=51 Score=30.77 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|+.++||++ |+.|.+- ..|++.|+++||+|+.+..
T Consensus 1 M~~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 666777665 4455443 4678999999999887653
No 304
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.42 E-value=59 Score=26.15 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.+|+++-. |.+ -..+++.|.++||+|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 46766643 443 467899999999999998764
No 305
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=22.35 E-value=61 Score=31.36 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
++||.|+=.+..| ..+|..|+++||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5788888766655 46899999999999998775
No 306
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=22.23 E-value=5.8e+02 Score=25.23 Aligned_cols=143 Identities=10% Similarity=0.000 Sum_probs=72.5
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhc-CCeEEE-eccchhhhhcCCCc
Q 010617 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVA-ARGQMI-SWAPQLRVLNHPSI 386 (506)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~-~n~~v~-~~vpq~~lL~h~~v 386 (506)
+.+++|..|... ...++.|.+.|.++.++-... .+.+.+-.. .++.+. +-.. .+-|...++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~---------~~~~~~l~~~~~i~~~~~~~~-~~~l~~~~l 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF---------IPQFTVWANEGMLTLVEGPFD-ETLLDSCWL 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC---------CHHHHHHHTTTSCEEEESSCC-GGGGTTCSE
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC---------CHHHHHHHhcCCEEEEECCCC-ccccCCccE
Confidence 668888887532 344556666787776555321 122222111 345443 2222 233444444
Q ss_pred ceEEeccCchh-----HHHHHHcCCcE--EeccCcccchhhHHhhhcc-ceeeeEeecCCCCCcCHHHHHHHHHHHhCCh
Q 010617 387 ACFLSHCGWNS-----TMEGVSNGIPF--LCWPYFGDQFLNERYICDF-WKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (506)
Q Consensus 387 ~~~ItHgG~~s-----v~eal~~GvP~--v~~P~~~DQ~~na~rv~~~-lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d~ 458 (506)
+|..-|.-. ..+|-..|+|+ +--|-..+...-+. +.+. +-+|+. .++....-+..|++.|.+.+.+.
T Consensus 76 --Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l~~~ 150 (457)
T 1pjq_A 76 --AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-IDRSPLMVAVS--SGGTSPVLARLLREKLESLLPQH 150 (457)
T ss_dssp --EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-EEETTEEEEEE--CTTSCHHHHHHHHHHHHHHSCTT
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-EEeCCeEEEEE--CCCCChHHHHHHHHHHHHhcchh
Confidence 777777654 44556679997 33333333321110 1111 234444 32212222578888888888542
Q ss_pred --HHHHHHHHHHHHHHh
Q 010617 459 --DFKARALELKEKAMS 473 (506)
Q Consensus 459 --~~r~~a~~l~~~~~~ 473 (506)
.+-+.+.++++++++
T Consensus 151 ~~~~~~~~~~~R~~~~~ 167 (457)
T 1pjq_A 151 LGQVARYAGQLRARVKK 167 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 455556666666655
No 307
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.16 E-value=66 Score=28.46 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=29.6
Q ss_pred EEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 6 VLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 6 il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
|.|++ -++-|-..-...||..|+++|++|.++-.+..
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 33444 45669999999999999999999999976553
No 308
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.15 E-value=4.9e+02 Score=24.32 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHH
Q 010617 324 QVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEG 401 (506)
Q Consensus 324 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~ea 401 (506)
.+.-..+++.++..+..+++..+-. .-+|+.+.+..+.++. +. +.+|. ..|.+.+..|
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym------~IL~~~~l~~~~~~~INiHpSlLP~--------------frG~~p~~~A 226 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYM------QILPPQLCREYAHQVINIHHSFLPS--------------FVGAKPYHQA 226 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCC------SCCCTTHHHHTTTCEEEEESSCTTS--------------SCSSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhh------hhcCHHHHhhhhCCeEEeCcccccC--------------CCCccHHHHH
Confidence 4445568888888888888887654 5678887766655444 33 33332 3588999999
Q ss_pred HHcCCcEEeccCc--ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHh
Q 010617 402 VSNGIPFLCWPYF--GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (506)
Q Consensus 402 l~~GvP~v~~P~~--~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl 455 (506)
+.+|+....+-.+ -+..+-+..+.. --+.+. ..-|.++|.+.+.++-
T Consensus 227 i~~G~k~tG~TvH~v~~~lD~GpII~Q---~~v~I~----~~dt~~~L~~r~~~~e 275 (302)
T 3o1l_A 227 SLRGVKLIGATCHYVTEELDAGPIIEQ---DVVRVS----HRDSIENMVRFGRDVE 275 (302)
T ss_dssp HHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred HHcCCCeEEEEEEEECCCCcCCCeEEE---EEEecC----CCCCHHHHHHHHHHHH
Confidence 9999999887754 244444444332 222332 3458899988877663
No 309
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=22.13 E-value=1.6e+02 Score=26.49 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSRPRVLVMPAPAQ-----------GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~~~~~-----------GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|..+||||+-.... -...=+......|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 54457887664321 244566677788889999999999754
No 310
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.12 E-value=1.2e+02 Score=24.37 Aligned_cols=43 Identities=9% Similarity=0.134 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 010617 93 LEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSS 138 (506)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 138 (506)
..+.++.+.. .+||+||+|.... .+..+.+.+ ++|++.++...
T Consensus 40 ~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 40 PLDALEALKG---TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTT---SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
No 311
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=22.04 E-value=94 Score=26.80 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
||||++ |+.|.+- ..|+++|+++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 355544 3445443 578999999999999987653
No 312
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=21.81 E-value=96 Score=26.92 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
||||++ |+.|.+- ..|+++|+++||+|+.++-..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 355544 3444443 678999999999999987643
No 313
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=21.79 E-value=91 Score=28.72 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
+.|+++++.++.| =-.++|+.|+++|++|.++.-..
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467788855543 34689999999999999887643
No 314
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=21.71 E-value=79 Score=27.64 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=26.7
Q ss_pred EEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEE
Q 010617 6 VLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFV 37 (506)
Q Consensus 6 il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~ 37 (506)
|++.. -++-|-..-...||..|+++|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44444 357799999999999999999999986
No 315
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=21.67 E-value=1.1e+02 Score=27.84 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.|.++++.++.| --.++|++|+++|++|.++...
T Consensus 28 ~~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 28 TGKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp SCCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3456777755443 3468999999999999988763
No 316
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=21.61 E-value=47 Score=33.88 Aligned_cols=35 Identities=14% Similarity=0.379 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 42 (506)
|+||+++=.+.-| +.+|+.|.++|++||++...++
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 6789888654434 5788999999999999987543
No 317
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=21.46 E-value=1e+02 Score=28.41 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=24.7
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|+ +++|.|+-.+..|. .+++.|++.||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 65 68999987666664 468889999999987644
No 318
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=21.33 E-value=71 Score=31.11 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|++++|+++-.+. .-+..|..|+++||+|+++-..
T Consensus 1 m~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 7788888876543 3567899999999999999654
No 319
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=21.32 E-value=1.2e+02 Score=27.12 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|-+.|+.+++.++.| =-.++|++|+++|++|.+...
T Consensus 1 Ml~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 1 MKMTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CCCSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 545567777755432 346889999999999988765
No 320
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=21.23 E-value=82 Score=28.54 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=28.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 6 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|.|..-|+-|-..-...||..|+++|++|.++=.+
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 44555667799999999999999999999998554
No 321
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.15 E-value=1.1e+02 Score=27.40 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+.++.+++.++. - =-.++++.|+++|++|+++.-.
T Consensus 4 ~~k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 4 KDKAVLITGAAH-G--IGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TTCEEEEESTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 345566664433 2 3467899999999999988654
No 322
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=21.13 E-value=1.9e+02 Score=24.53 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+.+||+|+..++.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 345789988766554 3456666788888999999998754
No 323
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=21.10 E-value=1.1e+02 Score=23.47 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=21.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSSA 139 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----gIP~v~~~~~~~ 139 (506)
.+||+||+|.... .+..+.+.+ ++|.+.++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 7899999997654 244444332 588888766543
No 324
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=21.09 E-value=78 Score=27.59 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=37.9
Q ss_pred HHhhhccceeeeEeecCCCCCcCHHHHHHHHHHHhCC-h------HHHHHHHHHHHHHHh----hhhcCCChHHHHHHHH
Q 010617 421 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN-Q------DFKARALELKEKAMS----SVREGGSSYKTFQNFL 489 (506)
Q Consensus 421 a~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~vl~d-~------~~r~~a~~l~~~~~~----~~~~gg~~~~~~~~~~ 489 (506)
+.--++ -|+|+.+ |+++|.++|.+++.. . .|+ +.-.+-..+|+ -|.++..-...+++-+
T Consensus 105 ~~Fe~~-cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~ 174 (187)
T 3tl4_X 105 MGMNEN-SGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEV 174 (187)
T ss_dssp HHHHHT-TTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHH
T ss_pred HHHHHH-CCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 333344 4899887 899999999999942 1 355 66666666654 1333444455555544
Q ss_pred HHH
Q 010617 490 QWV 492 (506)
Q Consensus 490 ~~~ 492 (506)
-.+
T Consensus 175 l~l 177 (187)
T 3tl4_X 175 LKL 177 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 325
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.06 E-value=1e+02 Score=27.23 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+|+++++.++.| =-.++|++|+++|++|.+....
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456677744432 3468999999999999888664
No 326
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.99 E-value=1.2e+02 Score=26.67 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=23.8
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+. .+.++++. +.|-+ -.++++.|+++||+|+++...
T Consensus 1 M~~~~k~vlVtG-asggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITG-ASRGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESS-TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEECC
Confidence 653 34556663 33433 468999999999999988764
No 327
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=20.76 E-value=86 Score=29.00 Aligned_cols=37 Identities=5% Similarity=0.152 Sum_probs=27.3
Q ss_pred CEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQGH---VIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
+||+|+..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899888664221 234567999999999999998764
No 328
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=20.65 E-value=90 Score=28.26 Aligned_cols=30 Identities=7% Similarity=-0.140 Sum_probs=23.8
Q ss_pred CCccEEEecCCcch-------HHHHHHHcCCceEEEc
Q 010617 106 EKIDCFIADGNIGW-------SMEIAKKMNVRGAVFW 135 (506)
Q Consensus 106 ~~~DlvV~D~~~~~-------~~~~A~~lgIP~v~~~ 135 (506)
.+||++++|..-.. |..+.-.+|+|++.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 57999999986543 6667777899999964
No 329
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=20.62 E-value=91 Score=29.48 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=26.9
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48999987654 43 378999999999999998653
No 330
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=20.62 E-value=4.1e+02 Score=23.61 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=65.3
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeE-EE-eccchhhhhcCCCcceEEeccCchhHHHHHHc
Q 010617 327 FQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSN 404 (506)
Q Consensus 327 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n~~-v~-~~vpq~~lL~h~~v~~~ItHgG~~sv~eal~~ 404 (506)
-..+++.++..+..++++.+-. .-+|+.+.+..+..+. +. +-+|. ..|...+..||.+
T Consensus 90 ~~~~~~~l~~~~~Dliv~agy~------~IL~~~~l~~~~~~~iNiHpSLLP~--------------yrG~~pi~~Ai~~ 149 (229)
T 3auf_A 90 DAALAERLQAYGVDLVCLAGYM------RLVRGPMLTAFPNRILNIHPSLLPA--------------FPGLEAQRQALEH 149 (229)
T ss_dssp HHHHHHHHHHTTCSEEEESSCC------SCCCHHHHHHSTTCEEEEESSCTTS--------------SCSSCHHHHHHHH
T ss_pred cHHHHHHHHhcCCCEEEEcChh------HhCCHHHHhhccCCEEEEccCcCcC--------------CCCcCHHHHHHHc
Confidence 3457788888888888887644 5678887766544333 22 22332 3488999999999
Q ss_pred CCcEEeccCc--ccchhhHHhhhccceeeeEeecCCCCCcCHHHHHHHHHHH
Q 010617 405 GIPFLCWPYF--GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (506)
Q Consensus 405 GvP~v~~P~~--~DQ~~na~rv~~~lG~G~~l~~~~~~~~~~~~l~~ai~~v 454 (506)
|.....+-++ .+..+.+..+.. .-+.+. ..-|.++|.+.+.++
T Consensus 150 G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~----~~dt~~~L~~rl~~~ 194 (229)
T 3auf_A 150 GVKVAGCTVHFVTAGVDEGPIILQ---AAVPVL----EGDTVEDLRRRILAE 194 (229)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCcCCCEEEE---EEEecC----CCCCHHHHHHHHHHH
Confidence 9999877754 355555555433 223332 345888888777665
No 331
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=20.53 E-value=94 Score=29.42 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=31.7
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 3 RPRVLVMPA-PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 3 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
++||+-++. |+-|-..-...||.+|+++|++|.++=-+.
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 577876653 455889999999999999999999986553
No 332
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=20.48 E-value=1.1e+02 Score=28.06 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=26.9
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+ +.|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 1 M~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 1 MKLTGEVALITGGASG---LGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp CTTTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 55 4567777755542 3468899999999999988653
No 333
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=20.38 E-value=1.3e+02 Score=23.95 Aligned_cols=44 Identities=18% Similarity=0.177 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 010617 93 LEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSSA 139 (506)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-----gIP~v~~~~~~~ 139 (506)
..+.++.+.. .+||+||+|.... .+..+++.+ ++|++.++....
T Consensus 55 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 55 GQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 3445555554 7899999998654 355555433 588887766443
No 334
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.36 E-value=96 Score=29.38 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=23.5
Q ss_pred CCccEEEecCCcchHHHHHHHcCCceEEEccch
Q 010617 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSS 138 (506)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~~~~ 138 (506)
.+||+||..........--+..|||++.+.+..
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~~ 147 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNPED 147 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCCS
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCCC
Confidence 699999987543334445567799999987543
No 335
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=20.33 E-value=95 Score=28.55 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=29.9
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010617 4 PRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (506)
Q Consensus 4 ~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 41 (506)
|+++ |..-|+-|-..-...||..|+++|++|.++=.+.
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4444 5455667999999999999999999999885543
No 336
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=20.26 E-value=1.2e+02 Score=30.03 Aligned_cols=25 Identities=8% Similarity=0.050 Sum_probs=18.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGF 32 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh 32 (506)
.||||++-.++. -.+||+.|++.+.
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 479999976654 3468999998875
No 337
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.25 E-value=1.2e+02 Score=27.42 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
++++++.++ |- =-.++++.|+++||+|.++.-.
T Consensus 8 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAA-QG--IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-Cc--HHHHHHHHHHHCCCEEEEEECC
Confidence 566666443 32 2467899999999999988654
No 338
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.25 E-value=80 Score=31.76 Aligned_cols=27 Identities=11% Similarity=0.118 Sum_probs=22.6
Q ss_pred CCccEEEecCCcchHHHHHHHcCCceEEEc
Q 010617 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (506)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgIP~v~~~ 135 (506)
.+||++|.... ...+|+++|||++.+.
T Consensus 374 ~~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 374 GQAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HTCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred cCCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 68999999843 5779999999999853
No 339
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=20.23 E-value=4.7e+02 Score=23.43 Aligned_cols=31 Identities=13% Similarity=-0.057 Sum_probs=21.3
Q ss_pred CCccEEEecCCcch----HHHHHHHcCCceEEEcc
Q 010617 106 EKIDCFIADGNIGW----SMEIAKKMNVRGAVFWP 136 (506)
Q Consensus 106 ~~~DlvV~D~~~~~----~~~~A~~lgIP~v~~~~ 136 (506)
.++|.||.-..... ....+...|||+|.+..
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 57999987654332 34456667999999753
No 340
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=20.21 E-value=54 Score=33.26 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+|++|.|+-.+..| ..||..|+++||+|++....
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 788899988777666 46899999999999887543
No 341
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=20.20 E-value=1e+02 Score=29.21 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.+||.|+-.++.| +-.+|+-|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3578899888887 55699999999999998744
No 342
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=20.16 E-value=80 Score=30.58 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
|++++|.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456788888655444 4778999999999998754
No 343
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=20.16 E-value=61 Score=30.27 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 010617 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-----G-FRVTFVNT 39 (506)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~ 39 (506)
+|||.|+-.|..|. .+|..|+++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 46899887666663 568888888 9 99999876
No 344
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.09 E-value=1.2e+02 Score=23.74 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=21.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 010617 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSS 138 (506)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 138 (506)
.+||+||+|. .. .+..+.+.+ ++|++.++...
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 6899999998 54 344444332 58888876543
No 345
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=20.06 E-value=1.3e+02 Score=26.79 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=26.3
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010617 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (506)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 40 (506)
|+ +.++.+++.++. - =-.++|+.|+++|++|.++...
T Consensus 1 m~l~~k~vlITGas~-g--IG~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 1 MSLNEKVALVTGASR-G--IGFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp CTTTTCEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 54 456677775443 2 2368899999999999888664
No 346
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=20.02 E-value=3.7e+02 Score=26.69 Aligned_cols=41 Identities=20% Similarity=0.323 Sum_probs=27.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhHHH
Q 010617 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (506)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 47 (506)
-++.+++.++.| + -..+|+.|+++|++|.++.-....+.+.
T Consensus 213 gk~~LVTGgsgG-I--G~aiA~~La~~Ga~Vvl~~r~~~~~~l~ 253 (454)
T 3u0b_A 213 GKVAVVTGAARG-I--GATIAEVFARDGATVVAIDVDGAAEDLK 253 (454)
T ss_dssp TCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEECGGGHHHHH
T ss_pred CCEEEEeCCchH-H--HHHHHHHHHHCCCEEEEEeCCccHHHHH
Confidence 357777755443 2 3688999999999998886644443333
No 347
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=20.00 E-value=1.1e+02 Score=26.25 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=27.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010617 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (506)
Q Consensus 5 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 39 (506)
.++++-.+..|+-.....+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 35555667778878889999999999999887654
Done!