Query 010619
Match_columns 506
No_of_seqs 278 out of 1066
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 02:38:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03191 Type I inositol-1,4,5 100.0 5E-109 1E-113 886.3 33.7 453 22-490 89-611 (621)
2 KOG0566 Inositol-1,4,5-triphos 100.0 2.8E-94 6.1E-99 788.0 23.0 318 28-482 524-847 (1080)
3 smart00128 IPPc Inositol polyp 100.0 9.3E-82 2E-86 643.3 27.6 295 40-470 2-308 (310)
4 COG5411 Phosphatidylinositol 5 100.0 1.8E-68 3.8E-73 552.1 17.4 310 28-474 17-334 (460)
5 PTZ00312 inositol-1,4,5-tripho 100.0 1E-31 2.3E-36 267.2 10.4 175 276-464 65-356 (356)
6 KOG0565 Inositol polyphosphate 100.0 2.4E-28 5.2E-33 223.6 11.9 142 234-380 2-145 (145)
7 KOG1976 Inositol polyphosphate 99.7 5E-19 1.1E-23 177.1 3.5 167 276-467 154-389 (391)
8 PF03372 Exo_endo_phos: Endonu 98.2 1E-06 2.3E-11 82.5 4.0 97 244-359 72-171 (249)
9 PRK05421 hypothetical protein; 98.2 1.4E-05 3.1E-10 80.2 12.3 128 278-467 134-262 (263)
10 TIGR03395 sphingomy sphingomye 98.2 2.4E-05 5.2E-10 79.8 13.9 147 275-463 117-282 (283)
11 PRK13911 exodeoxyribonuclease 98.0 0.00012 2.5E-09 73.6 14.5 36 45-84 3-38 (250)
12 PRK11756 exonuclease III; Prov 97.1 0.0018 4E-08 64.6 8.4 65 278-356 88-155 (268)
13 TIGR00633 xth exodeoxyribonucl 97.1 0.0054 1.2E-07 60.0 11.4 34 44-81 2-36 (255)
14 COG3568 ElsH Metal-dependent h 97.1 0.0033 7.1E-08 63.7 9.9 61 278-359 118-186 (259)
15 KOG2756 Predicted Mg2+-depende 96.7 0.016 3.5E-07 59.0 11.1 60 285-358 198-257 (349)
16 PTZ00297 pantothenate kinase; 96.4 0.024 5.2E-07 69.7 12.3 69 276-354 130-205 (1452)
17 TIGR00195 exoDNase_III exodeox 93.0 0.47 1E-05 46.9 8.8 34 44-81 2-35 (254)
18 PF14529 Exo_endo_phos_2: Endo 91.2 0.067 1.5E-06 45.9 0.2 33 429-461 86-119 (119)
19 PLN03144 Carbon catabolite rep 90.6 2 4.2E-05 48.9 11.1 63 292-372 418-480 (606)
20 KOG3873 Sphingomyelinase famil 90.3 1.1 2.5E-05 47.5 8.3 198 239-469 74-295 (422)
21 COG0708 XthA Exonuclease III [ 88.3 0.099 2.2E-06 53.2 -1.1 33 45-81 3-35 (261)
22 smart00476 DNaseIc deoxyribonu 83.0 5.2 0.00011 41.1 8.3 103 234-357 79-189 (276)
23 KOG2338 Transcriptional effect 82.0 2.5 5.5E-05 46.5 5.8 94 248-355 204-303 (495)
24 PRK11756 exonuclease III; Prov 77.0 0.75 1.6E-05 45.9 -0.1 33 45-81 3-35 (268)
25 PF03372 Exo_endo_phos: Endonu 73.8 0.86 1.9E-05 42.4 -0.6 14 425-438 214-227 (249)
26 TIGR00195 exoDNase_III exodeox 66.6 2.3 5E-05 42.0 0.6 52 292-357 98-151 (254)
27 COG3021 Uncharacterized protei 66.1 3.4 7.4E-05 43.1 1.8 59 277-355 173-233 (309)
28 PRK15251 cytolethal distending 59.2 7.9 0.00017 39.8 2.9 55 277-354 140-194 (271)
29 PRK15251 cytolethal distending 57.9 88 0.0019 32.3 10.2 43 35-81 19-65 (271)
30 PRK05421 hypothetical protein; 48.3 11 0.00025 37.8 2.0 35 42-81 43-78 (263)
31 TIGR00633 xth exodeoxyribonucl 47.5 7.8 0.00017 37.7 0.7 53 291-357 100-154 (255)
32 KOG3870 Uncharacterized conser 29.7 21 0.00046 38.7 0.6 17 341-357 349-365 (434)
33 cd01251 PH_centaurin_alpha Cen 28.3 77 0.0017 27.4 3.8 34 77-111 69-102 (103)
34 PRK10947 global DNA-binding tr 25.1 39 0.00085 31.3 1.4 24 402-432 93-119 (135)
35 COG3021 Uncharacterized protei 23.0 2.2E+02 0.0047 30.1 6.5 37 428-466 270-307 (309)
No 1
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=100.00 E-value=4.5e-109 Score=886.34 Aligned_cols=453 Identities=41% Similarity=0.685 Sum_probs=347.6
Q ss_pred cccccCCCCCcCCCccceeEEEEEEEeeCCCCCCCCCCCcccccCCCCCCcEEEEeeEEEEecCCCceeeecCcchHHHH
Q 010619 22 SLNLSSFEPSMTSVTEIQRLRIYAATWNVGGKTPSNSLNLEDFLEVECSADIYVCGFQEIVKLSAGNVLVIEDNEPAAKW 101 (506)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~rifvgTWNV~g~~p~~~ldl~~wl~~~~~~DiyviGfQEiV~Lna~~vl~~ED~~p~~kW 101 (506)
.+++...++.+++|++++++|||||||||||+.|+.+|+|.+||..++|||||||||||||||||||||++||+.|+++|
T Consensus 89 ~~rr~~~e~~ra~y~~~~~~rv~v~TWNV~g~~p~~~l~l~~wl~~~~p~DiyviG~QE~v~lna~nv~~~~~~~~~~~W 168 (621)
T PLN03191 89 KHRRGKSETLRAQYINTKDIRVTIGTWNVAGRLPSEDLEIEDWLSTEEPADIYIIGFQEVVPLNAGNVLGAEDSRPIPKW 168 (621)
T ss_pred hhhccchhhhHHHhccccceEEEEEEeecCCCCCcccCCHHHhccCCCCCCEEEEeeEEeccCcHhhhhccccCCchhhH
Confidence 34445567888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCC--CcccCCCCCCCCccCCCCCCCCCCCCCCC----CCCccc-------------------ccCchh
Q 010619 102 LALIHQALNRPKND--SIYSTSESNSHTKQTNSNNNNNNSKDAKS----PSSLNL-------------------FQKPSL 156 (506)
Q Consensus 102 ~~lI~~aLN~~~~~--~~~~~~~~~sp~~~~~~~~~~~~~~~~~~----~~~~~~-------------------~~~~~~ 156 (506)
+.+|+++||+.++. +++++|+||||+..+. .-......+..+ .....| |++.++
T Consensus 169 ~~~i~~tl~~~~~~~~~~k~~S~ppsp~~~~~-~~~~e~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (621)
T PLN03191 169 EAIIRRTLNKSNKPESKHKSYSAPPSPVLRTS-IVADELAEEVDSLPLEMMNNEFIDAATGCPSLEPERNKNIGWPEHSL 247 (621)
T ss_pred HHHHHHHHhccCCCCCccccCCCCCCcccCCc-chhhhhhhhcccChhhhcccccccccccccccchhhccccCCccccc
Confidence 99999999998875 4788999999987221 100000000000 000011 111111
Q ss_pred --------------hHhhhccccchhhhhccCCCCCCCchhh-----------hhhh-h-------ccccccccccCccC
Q 010619 157 --------------KVLSRNLRADSTLLKACNCPIESPGRER-----------RRIR-K-------LSDRTSKLECNHES 203 (506)
Q Consensus 157 --------------~~~s~~~r~~~~~~~~~~~~~~~~~~~~-----------~r~~-~-------~~~~~~~~~~~~~~ 203 (506)
+.+|.+-|+. .++.+.|..+. +|.. . |.+.-.+.+....+
T Consensus 248 ~~~~~~~~~~~~l~r~~s~~~r~~-------~~~~e~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 320 (621)
T PLN03191 248 DATPQVVSSNSKLRRVFSSSARLG-------FKWPENPSLFSPQRFALNARGLKRSHRSFGNLGLSWNEIKQRSEVPEVP 320 (621)
T ss_pred ccCcccccccccceeeeccccccc-------cCCCCCccccCchhhcccccccchhhhccccccccccchhhcccccccc
Confidence 1111111111 11111111100 0000 0 00000000000000
Q ss_pred C--Ccccccc--chhhhccCCCCCCC--------CcCCCCCCCeEEEEeeeeeceEEEEEEeCCCCCCcCceeEeeEeec
Q 010619 204 L--LPQRDIS--SVVVELFSIPEIPA--------SSCSHGQRSYRLIASKQMVGIFLSVWVRNDLVPHIGHLRFSSVGRG 271 (506)
Q Consensus 204 ~--~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~Y~~v~s~qmvGi~L~Vfvr~~l~~~I~~v~~~~v~tG 271 (506)
. ++..+.+ +..++++..++++. ........+|++|.|+|||||+|+||||+++.++|++|++++|+||
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YvkV~S~qLvGl~L~VFvk~~l~~~Is~V~~s~V~tG 400 (621)
T PLN03191 321 EVIDSLSDVSDRSSEAEDDTFKEVPSYQLPEDLIKDCRKVKQKYVRIVSKQMVGIYVSVWVRKRLRRHINNLKVSPVGVG 400 (621)
T ss_pred cccccccccccccCCCcccccccCChhhhhhHHHHhhccCCCCEEEEEEEeeeeEEEEEEEehhhhhhcccceeeeEeec
Confidence 0 0000000 01111122222221 1234467899999999999999999999999999999999999999
Q ss_pred cceecCCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEec
Q 010619 272 IMGCLGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLG 351 (506)
Q Consensus 272 i~G~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~G 351 (506)
+||++||||||+|||.|++|+|||||||||||++++++.+||+||.+|++++.|+.... ...++.|.+||+|||||
T Consensus 401 l~G~~GNKGAVaIr~~l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~----~~~~~~I~dhD~vFWlG 476 (621)
T PLN03191 401 LMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLD----TDQPQTIPSHDQIFWFG 476 (621)
T ss_pred cccccccceeEEEEEEEcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccc----cCCCccccccceEEEec
Confidence 99999999999999999999999999999999988788899999999999999975321 23456889999999999
Q ss_pred cccceeecCHHHHHHHHhcCChHHHHhhhhhHHHHhcCcccCCccccccccCCcccccCCCCCCCCccccCCCCccCccc
Q 010619 352 DLNYRVALSYEKTRLLLEDNDWDSLLEKDQLNIERESGRAFNGFNEGRIFFAPTYKYSHNSDCYAGETVKSKKKRRTPAW 431 (506)
Q Consensus 352 DLNYRI~l~~~ev~~li~~~~~~~LL~~DQL~~e~~~g~~F~gf~Eg~I~F~PTYKy~~gsd~Yd~~~~~ss~K~R~PSW 431 (506)
||||||++++++++++|++++|+.||++|||+.|+++|++|.||+||+|+|||||||+.|++.|+++..++++|+|+|||
T Consensus 477 DLNYRIdl~~~ev~~lI~~~~~~~LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSW 556 (621)
T PLN03191 477 DLNYRLNMLDTEVRKLVAQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAW 556 (621)
T ss_pred CccccccCCHHHHHHHHhhccHHHHHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999876677899999999
Q ss_pred CcceeecCCCceeeeeccCCCccCCCcccccEEEEEechhhhccchhhhhhhccccccc
Q 010619 432 CDRILWRGNGIEQLSYIRGESRFSDHRPVCAVFSVEVERDVRIKSSNRLRKGFCSADTR 490 (506)
Q Consensus 432 cDRIL~~~~~i~~l~Y~~~e~~~SDHrPV~a~F~v~v~~~v~~~~~~~~~~~~~~~~~~ 490 (506)
||||||++++++++.|.+.++++||||||+|+|.|+|+ +.+ +.++|+.+...+|.
T Consensus 557 CDRILykg~~i~~l~Y~s~ei~~SDHRPV~A~F~v~V~--~id--~~k~q~~~~~~~a~ 611 (621)
T PLN03191 557 CDRILWLGKGIKQLCYKRSEIRLSDHRPVSSMFLVEVE--VFD--HRKLQRALNVNSAA 611 (621)
T ss_pred hheEeecCCCceEeEeccCCcccCCchhcceEEEEEEE--ecC--HHHHHhhhhcchhh
Confidence 99999999999999999999999999999999999999 666 68899998877765
No 2
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.8e-94 Score=788.00 Aligned_cols=318 Identities=41% Similarity=0.695 Sum_probs=292.1
Q ss_pred CCCCcCCCccceeEEEEEEEeeCCCCCCCCCCCcccccCCC------CCCcEEEEeeEEEEecCCCceeeecCcchHHHH
Q 010619 28 FEPSMTSVTEIQRLRIYAATWNVGGKTPSNSLNLEDFLEVE------CSADIYVCGFQEIVKLSAGNVLVIEDNEPAAKW 101 (506)
Q Consensus 28 ~~~~~~~~~~~~~~rifvgTWNV~g~~p~~~ldl~~wl~~~------~~~DiyviGfQEiV~Lna~~vl~~ED~~p~~kW 101 (506)
|......|++.++|+||||||||||+.+.-.-||.+||.+. .+||||||||||||+||||||+.+ |+.....|
T Consensus 524 L~er~~eyt~~k~i~IfvgTfNvNG~s~~~k~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~A-s~tk~~~W 602 (1080)
T KOG0566|consen 524 LRERRSEYTEPKDISIFVGTFNVNGRSAAFKDDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSA-STTKRRFW 602 (1080)
T ss_pred HHHhhhhhccccceEEEEEeeeccCccccchhhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceecc-ChHHHHHH
Confidence 34455579999999999999999997666556789999863 379999999999999999999986 89999999
Q ss_pred HHHHHHHhCCCCCCCcccCCCCCCCCccCCCCCCCCCCCCCCCCCCcccccCchhhHhhhccccchhhhhccCCCCCCCc
Q 010619 102 LALIHQALNRPKNDSIYSTSESNSHTKQTNSNNNNNNSKDAKSPSSLNLFQKPSLKVLSRNLRADSTLLKACNCPIESPG 181 (506)
Q Consensus 102 ~~lI~~aLN~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~r~~~~~~~~~~~~~~~~~ 181 (506)
+..|.++||+.
T Consensus 603 ee~i~~~Ln~~--------------------------------------------------------------------- 613 (1080)
T KOG0566|consen 603 EEKILKTLNRY--------------------------------------------------------------------- 613 (1080)
T ss_pred HHHHHHHhcCC---------------------------------------------------------------------
Confidence 99999999841
Q ss_pred hhhhhhhhccccccccccCccCCCccccccchhhhccCCCCCCCCcCCCCCCCeEEEEeeeeeceEEEEEEeCCCCCCcC
Q 010619 182 RERRRIRKLSDRTSKLECNHESLLPQRDISSVVVELFSIPEIPASSCSHGQRSYRLIASKQMVGIFLSVWVRNDLVPHIG 261 (506)
Q Consensus 182 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~v~s~qmvGi~L~Vfvr~~l~~~I~ 261 (506)
..+|+++.|.||||++|++|+|.++.++|+
T Consensus 614 --------------------------------------------------~~kYvlL~s~QlvGv~L~iF~r~~~~p~Ik 643 (1080)
T KOG0566|consen 614 --------------------------------------------------KNKYVLLRSEQLVGVCLLLFIRPDHAPYIK 643 (1080)
T ss_pred --------------------------------------------------CCceEEEehhhhheeeEEEEEcccccchhh
Confidence 147999999999999999999999999999
Q ss_pred ceeEeeEeeccceecCCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcc
Q 010619 262 HLRFSSVGRGIMGCLGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERI 341 (506)
Q Consensus 262 ~v~~~~v~tGi~G~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i 341 (506)
+|..++++||++|..||||||||||.+++|+|||||+|||||+.+ +.+||.||.+|.++++||+. .+|
T Consensus 644 ~V~~~tkKTGfGG~tgNKGAVAIrf~~~~TsfCFv~SHlAAG~sn--v~ERn~DY~tI~r~l~Fp~G----------r~I 711 (1080)
T KOG0566|consen 644 DVAGDTKKTGFGGATGNKGAVAIRFVYHATSFCFVCSHLAAGQSN--VEERNEDYKTIARKLRFPRG----------RMI 711 (1080)
T ss_pred hcccceeecccccccCCCceEEEEEEeccccEEEEecccccccch--HhhhhhhHHHHHHhccccCC----------ccc
Confidence 999999999999999999999999999999999999999999976 67899999999999999973 468
Q ss_pred cccccEEEeccccceeecCHHHHHHHHhcCChHHHHhhhhhHHHHhcCcccCCccccccccCCcccccCCCCCCCCcccc
Q 010619 342 IDHDRVIWLGDLNYRVALSYEKTRLLLEDNDWDSLLEKDQLNIERESGRAFNGFNEGRIFFAPTYKYSHNSDCYAGETVK 421 (506)
Q Consensus 342 ~dhD~vfw~GDLNYRI~l~~~ev~~li~~~~~~~LL~~DQL~~e~~~g~~F~gf~Eg~I~F~PTYKy~~gsd~Yd~~~~~ 421 (506)
.+||+|||||||||||+|++|||+.+|.+++|+.|+++|||++||.+|.+|.||.|++|+|+||||||.||+.|||
T Consensus 712 ~~HD~ifW~GDFNYRI~l~nEEVr~~v~~~d~~kL~e~DQL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gTd~YDT---- 787 (1080)
T KOG0566|consen 712 FSHDYIFWLGDFNYRIDLSNEEVRRLVRNQDLDKLLEYDQLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGTDDYDT---- 787 (1080)
T ss_pred cCCceEEEecccceeecCCHHHHHHHHHhccHHHHhhHHHHHHHHhcCcccccccccccccCCcccccCCCCcccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCccCcccCcceeecCCCceeeeeccCCCccCCCcccccEEEEEechhhhccchhhhhh
Q 010619 422 SKKKRRTPAWCDRILWRGNGIEQLSYIRGESRFSDHRPVCAVFSVEVERDVRIKSSNRLRK 482 (506)
Q Consensus 422 ss~K~R~PSWcDRIL~~~~~i~~l~Y~~~e~~~SDHrPV~a~F~v~v~~~v~~~~~~~~~~ 482 (506)
|+|+|+|||||||||++..+.+++|.+.|+++||||||+|+|.++|..+-..++.+.+++
T Consensus 788 -SeK~R~PAWTDRIL~r~e~~~~l~Y~~~el~~SDHRPV~A~~~a~i~~Vd~~kk~~l~ee 847 (1080)
T KOG0566|consen 788 -SEKCRTPAWTDRILWRGEKLELLSYKRAELKTSDHRPVYAIFRAEIFEVDEQKKLRLFEE 847 (1080)
T ss_pred -chhccCccchhhheeccccccccccccccccccCCCceEEEEEEEEEEEcHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999984444433333333
No 3
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=100.00 E-value=9.3e-82 Score=643.30 Aligned_cols=295 Identities=39% Similarity=0.705 Sum_probs=264.4
Q ss_pred eEEEEEEEeeCCCCCCCCCCCcccccCC------CCCCcEEEEeeEEEEecCCCceeeecCcchHHHHHHHHHHHhCCCC
Q 010619 40 RLRIYAATWNVGGKTPSNSLNLEDFLEV------ECSADIYVCGFQEIVKLSAGNVLVIEDNEPAAKWLALIHQALNRPK 113 (506)
Q Consensus 40 ~~rifvgTWNV~g~~p~~~ldl~~wl~~------~~~~DiyviGfQEiV~Lna~~vl~~ED~~p~~kW~~lI~~aLN~~~ 113 (506)
+++|||+||||||+.++...+|.+||.. +..||||||||||||++++.+++. .++.....|..+|..+|+.
T Consensus 2 ~~~v~v~TwNv~~~~~~p~~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~-~~~~~~~~W~~~i~~~l~~-- 78 (310)
T smart00128 2 DIKVLVGTWNVGGLKADPKVDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLE-TIAGKERLWSKLIESSLNG-- 78 (310)
T ss_pred ceEEEEEEEECCCccCCChhhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhh-ccchhHHHHHHHHHHhcCC--
Confidence 6899999999999863334567999975 268999999999999999999986 5778889999998877741
Q ss_pred CCCcccCCCCCCCCccCCCCCCCCCCCCCCCCCCcccccCchhhHhhhccccchhhhhccCCCCCCCchhhhhhhhcccc
Q 010619 114 NDSIYSTSESNSHTKQTNSNNNNNNSKDAKSPSSLNLFQKPSLKVLSRNLRADSTLLKACNCPIESPGRERRRIRKLSDR 193 (506)
Q Consensus 114 ~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~r~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (506)
T Consensus 79 -------------------------------------------------------------------------------- 78 (310)
T smart00128 79 -------------------------------------------------------------------------------- 78 (310)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCccCCCccccccchhhhccCCCCCCCCcCCCCCCCeEEEEeeeeeceEEEEEEeCCCCCCcCceeEeeEeeccc
Q 010619 194 TSKLECNHESLLPQRDISSVVVELFSIPEIPASSCSHGQRSYRLIASKQMVGIFLSVWVRNDLVPHIGHLRFSSVGRGIM 273 (506)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~v~s~qmvGi~L~Vfvr~~l~~~I~~v~~~~v~tGi~ 273 (506)
+.+|.+|++.+|+||+|+||+|.++.++|++|.++++++|++
T Consensus 79 --------------------------------------~~~Y~~v~~~~l~gi~l~vf~~~~~~~~i~~v~~~~v~~G~~ 120 (310)
T smart00128 79 --------------------------------------DGQYNVLAKVRLVGILVLVFVKANHLVYIKDVETFTVKTGMG 120 (310)
T ss_pred --------------------------------------CCceEEEeeeeecceEEEEEEehhhcCccceeEeeeeecccc
Confidence 146999999999999999999999999999999999999999
Q ss_pred eecCCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEeccc
Q 010619 274 GCLGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDL 353 (506)
Q Consensus 274 G~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDL 353 (506)
|.+||||||+|+|.+.+++||||||||+||+.+ ..+||+||.+|++++.|+.... ..+.+||++||||||
T Consensus 121 ~~~~nKG~v~i~~~~~~~~~~fv~~HL~a~~~~--~~~R~~~~~~I~~~~~f~~~~~--------~~~~~~d~~f~~GDl 190 (310)
T smart00128 121 GLWGNKGAVAVRFKLSDTSFCFVNSHLAAGASN--VEQRNQDYKTILRALSFPERAE--------LSQFDHDVVFWFGDL 190 (310)
T ss_pred ceeecCceEEEEEEEcCcEEEEEeeccccccch--hhhhHHHHHHHHHhcCCCCCcc--------ccccccceEEEecCc
Confidence 999999999999999999999999999999875 6789999999999999875211 125789999999999
Q ss_pred cceeecCH-HHHHHHHhcCChHHHHhhhhhHHHHhcCcccCCccccccccCCccccc-CCCCCCCCccccCCCCccCccc
Q 010619 354 NYRVALSY-EKTRLLLEDNDWDSLLEKDQLNIERESGRAFNGFNEGRIFFAPTYKYS-HNSDCYAGETVKSKKKRRTPAW 431 (506)
Q Consensus 354 NYRI~l~~-~ev~~li~~~~~~~LL~~DQL~~e~~~g~~F~gf~Eg~I~F~PTYKy~-~gsd~Yd~~~~~ss~K~R~PSW 431 (506)
||||++.+ ++++++|++++|+.||++|||+.+++++.+|.||.|++|+|||||||+ .|++.|++ ++|+|+|||
T Consensus 191 NyRi~~~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~~t~~Yd~-----~~k~R~PsW 265 (310)
T smart00128 191 NFRLDSPSYEEVRRKISKKEFDDLLEKDQLNRQKEAGKVFKGFQEGPITFPPTYKYDSVGTETYDT-----SEKKRVPAW 265 (310)
T ss_pred ceeecCCCHHHHHHHHhhCcHHHHhhhhhHHHHhhcccccCcCccCCcCCCCCeeecCCCCccccC-----cccccCcch
Confidence 99999987 899999999999999999999999999999999999999999999999 99999995 689999999
Q ss_pred CcceeecC--CCceeee-ecc-CCCccCCCcccccEEEEEech
Q 010619 432 CDRILWRG--NGIEQLS-YIR-GESRFSDHRPVCAVFSVEVER 470 (506)
Q Consensus 432 cDRIL~~~--~~i~~l~-Y~~-~e~~~SDHrPV~a~F~v~v~~ 470 (506)
||||||+. ..+.++. |.+ .++.+||||||+|.|.|++.+
T Consensus 266 cDRIL~~~~~~~~~~~~~Y~s~~~~~~SDHkPV~~~f~v~~~~ 308 (310)
T smart00128 266 CDRILYRSNGPNLIQLSEYHSGMELTTSDHKPVFATFRLKVTA 308 (310)
T ss_pred hheehhhccCCCceecccccCCCccCCcCcccccEEEEEEEEe
Confidence 99999995 3455665 865 589999999999999999973
No 4
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-68 Score=552.13 Aligned_cols=310 Identities=35% Similarity=0.546 Sum_probs=278.4
Q ss_pred CCCCcCCCccceeEEEEEEEeeCCCCCCCCCCCcccccCC----CCCCcEEEEeeEEEEecCCCceeeecC-cchHHHHH
Q 010619 28 FEPSMTSVTEIQRLRIYAATWNVGGKTPSNSLNLEDFLEV----ECSADIYVCGFQEIVKLSAGNVLVIED-NEPAAKWL 102 (506)
Q Consensus 28 ~~~~~~~~~~~~~~rifvgTWNV~g~~p~~~ldl~~wl~~----~~~~DiyviGfQEiV~Lna~~vl~~ED-~~p~~kW~ 102 (506)
+..++.+|+.-+++.+|++|.|++|..| ..++..||.+ ...+|+||+||||+|+|++|.|+.+ | ......|+
T Consensus 17 l~~~~sk~~~~~~~~~f~~~~n~~~~~~--k~~~k~~lfP~~~~~~~~dlyVvGlQEvv~lt~~sils~-~p~~rl~~we 93 (460)
T COG5411 17 LRQRRSKYVIEKDVSIFVSTFNPPGKPP--KASTKRWLFPEIEATELADLYVVGLQEVVELTPGSILSA-DPYDRLRIWE 93 (460)
T ss_pred HHHHhhhheeecceeeEeccccCCCCCc--hhhhhhhcccccccccccceEEeccceeeeccchhhccC-CcccccchhH
Confidence 3455667899999999999999999987 3456999988 2589999999999999999999986 5 44457788
Q ss_pred HHHHHHhCCCCCCCcccCCCCCCCCccCCCCCCCCCCCCCCCCCCcccccCchhhHhhhccccchhhhhccCCCCCCCch
Q 010619 103 ALIHQALNRPKNDSIYSTSESNSHTKQTNSNNNNNNSKDAKSPSSLNLFQKPSLKVLSRNLRADSTLLKACNCPIESPGR 182 (506)
Q Consensus 103 ~lI~~aLN~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~r~~~~~~~~~~~~~~~~~~ 182 (506)
+.+-..||..
T Consensus 94 s~~~~~Ln~~---------------------------------------------------------------------- 103 (460)
T COG5411 94 SKVLDCLNGA---------------------------------------------------------------------- 103 (460)
T ss_pred HHHHHHhccc----------------------------------------------------------------------
Confidence 8877777620
Q ss_pred hhhhhhhccccccccccCccCCCccccccchhhhccCCCCCCCCcCCCCCCCeEEEEeeeeeceEEEEEEeCCCCCCcCc
Q 010619 183 ERRRIRKLSDRTSKLECNHESLLPQRDISSVVVELFSIPEIPASSCSHGQRSYRLIASKQMVGIFLSVWVRNDLVPHIGH 262 (506)
Q Consensus 183 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~v~s~qmvGi~L~Vfvr~~l~~~I~~ 262 (506)
+...+|.++.+.||+|+++.||.+.+-++.+.+
T Consensus 104 -----------------------------------------------~~~eky~~l~s~q~~~~~~~vf~~~~~~~v~~~ 136 (460)
T COG5411 104 -----------------------------------------------QSDEKYSLLRSPQLGGILLRVFSLATNLPVVKP 136 (460)
T ss_pred -----------------------------------------------ccCCceEEecchhccCcceEEeeeccccceecc
Confidence 123579999999999999999999999999999
Q ss_pred eeEeeEeeccceecCCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccc
Q 010619 263 LRFSSVGRGIMGCLGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERII 342 (506)
Q Consensus 263 v~~~~v~tGi~G~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~ 342 (506)
|..+.-+||++|..+|||+|+++|.+..++||||+|||+||..+ .++|+.||..|.+.+.|++. ..|.
T Consensus 137 V~~~~~KtG~gg~s~nKGav~i~~~~~~t~~cFv~shlaag~~N--~eeR~~Dy~~I~~~i~f~~g----------~~I~ 204 (460)
T COG5411 137 VSGTVKKTGFGGSSSNKGAVAIRFNYERTSFCFVNSHLAAGVNN--IEERIFDYRSIASNICFSRG----------LRIY 204 (460)
T ss_pred ccccccccccceecccccccceeEEeecCCcEEEecchhccccc--HHHHHHHHHHHHHheecCCC----------ceec
Confidence 99999999999999999999999999999999999999999864 67899999999999999752 4689
Q ss_pred ccccEEEeccccceeecCHHHHHHHHhcCC--hHHHHhhhhhHHHHhcCcccCCccccccccCCcccccCCCCCCCCccc
Q 010619 343 DHDRVIWLGDLNYRVALSYEKTRLLLEDND--WDSLLEKDQLNIERESGRAFNGFNEGRIFFAPTYKYSHNSDCYAGETV 420 (506)
Q Consensus 343 dhD~vfw~GDLNYRI~l~~~ev~~li~~~~--~~~LL~~DQL~~e~~~g~~F~gf~Eg~I~F~PTYKy~~gsd~Yd~~~~ 420 (506)
+||+|||+|||||||++.+++++..+...+ +.+|+++|||..|+..|.+|.||+|..|+|||||||+.|+++||+
T Consensus 205 ~hdti~w~GDlNyRVts~~e~v~~~~~~~~g~~~~l~~~DqL~~e~~~g~~f~~f~E~~i~FpPTYKfd~gt~~ydt--- 281 (460)
T COG5411 205 DHDTIFWLGDLNYRVTSTNEEVRPEIASDDGRLDKLFEYDQLLWEMEVGNVFPGFKEPVITFPPTYKFDYGTDEYDT--- 281 (460)
T ss_pred ccceEEEecccCceeecCchhcchhhhCCcchhhhhhhhhhHhhhhcccccccceecccccCCCceEeecCCccccc---
Confidence 999999999999999999999999888776 888999999999999999999999999999999999999999996
Q ss_pred cCCCCccCcccCcceeecCCCceeeeeccCC-CccCCCcccccEEEEEechhhhc
Q 010619 421 KSKKKRRTPAWCDRILWRGNGIEQLSYIRGE-SRFSDHRPVCAVFSVEVERDVRI 474 (506)
Q Consensus 421 ~ss~K~R~PSWcDRIL~~~~~i~~l~Y~~~e-~~~SDHrPV~a~F~v~v~~~v~~ 474 (506)
++|.|+|||||||||++.....++|.+.. +++||||||+|+|.+.+......
T Consensus 282 --sdk~RiPsWtDRIl~~s~~~~p~sY~sip~l~~SDHrPV~a~~~~~i~~~d~~ 334 (460)
T COG5411 282 --SDKGRIPSWTDRILYKSEQLTPHSYSSIPHLMISDHRPVYATFRAKIKVVDPS 334 (460)
T ss_pred --cccccCCchhhhhhhhccccccccccccCceeecCCCeEEEEEecceEEeCcc
Confidence 78999999999999999988999998765 99999999999999999844333
No 5
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=99.97 E-value=1e-31 Score=267.22 Aligned_cols=175 Identities=22% Similarity=0.336 Sum_probs=129.5
Q ss_pred cCCceEEEEEEEEeceEEEEEeecCCCCCCCccH---------HHHHHHHHHHHHhcCCCcccCCCCCCCCCCccccccc
Q 010619 276 LGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDE---------LKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDR 346 (506)
Q Consensus 276 ~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~---------~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~ 346 (506)
++.||.+.+|++|+++.|||||+||.+++++.+. ..|..++..||.+.. ..+..+++
T Consensus 65 wSRKGfmrtrw~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~--------------~~~~~~~~ 130 (356)
T PTZ00312 65 RSRKGFLLLSLRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECS--------------AFISPSDP 130 (356)
T ss_pred ccccceEEEEEEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHh--------------hccCCCCc
Confidence 7999999999999999999999999999876432 457888998886532 12345799
Q ss_pred EEEeccccceeecC-HHH-HHH------HHh------cCChHHHHhhhhhHHHHhc-------------CcccCCccccc
Q 010619 347 VIWLGDLNYRVALS-YEK-TRL------LLE------DNDWDSLLEKDQLNIERES-------------GRAFNGFNEGR 399 (506)
Q Consensus 347 vfw~GDLNYRI~l~-~~e-v~~------li~------~~~~~~LL~~DQL~~e~~~-------------g~~F~gf~Eg~ 399 (506)
+|||||||||++.. +.+ +++ .++ ...|.+|++.|||..|++. .+.|.++.|.|
T Consensus 131 lF~fGDfNyRld~~~~~e~L~ek~Ql~ve~~~g~~~~P~hf~~Lf~~dQl~rE~~~fd~e~q~l~~~va~~s~~eLaE~p 210 (356)
T PTZ00312 131 LFIFGDFNVRLDGHNLLEWLKEKMQIDVKIEVKRVRAPDRFWELFTNPQTQGEIRRFDLELQRLMDVVAQQSGVELAEFA 210 (356)
T ss_pred EEEeccceeeeccccHHHHhcccccccccccccccCChHHHHHHhcChhhhHHHhhhhhhhhhhhhhhhhhcccchhccc
Confidence 99999999999853 211 111 111 2358999999999999985 56788999999
Q ss_pred cccCCcccccC-----C-----------CCCCC---------Cc----------------------------cccCCCCc
Q 010619 400 IFFAPTYKYSH-----N-----------SDCYA---------GE----------------------------TVKSKKKR 426 (506)
Q Consensus 400 I~F~PTYKy~~-----g-----------sd~Yd---------~~----------------------------~~~ss~K~ 426 (506)
|+||||||-.. + ...|. .+ ....+.+.
T Consensus 211 I~FpPTYkrva~r~~~~~~~~~a~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~g~~d~i~~~~~l~~~ta~P~r~~~~~ 290 (356)
T PTZ00312 211 IRFPPTYPRVAERTNTGAQIESAGANVAASVYGVKDVAAKLDNQQRKKAAKDLKGTADAILASVVLTRVTAIPHRNYCRD 290 (356)
T ss_pred ccCCCcchhhhhhcCCcchhhhcccccccchhcccccccccccccccchhhhccCccceeeeeeeeecccccCCcchhcc
Confidence 99999999321 1 11111 10 00235678
Q ss_pred cCcccCcceeecCCCc----------------------------eeeeeccCCCccCCCcccccEE
Q 010619 427 RTPAWCDRILWRGNGI----------------------------EQLSYIRGESRFSDHRPVCAVF 464 (506)
Q Consensus 427 R~PSWcDRIL~~~~~i----------------------------~~l~Y~~~e~~~SDHrPV~a~F 464 (506)
|+|||||||||...++ .+.-|.+.++..+||.||+..|
T Consensus 291 r~pawcdrvl~~~~~~~~~~~~r~~~a~~~~~aa~~~~~~~~~~~~~~Y~s~~L~htDH~~V~~lF 356 (356)
T PTZ00312 291 RLPAWCDRVLWNPAGLELMTGDRSRSASPQSAAASKGDQASGQSCRYAYRSIDLIHTDHDGVFLLF 356 (356)
T ss_pred cchhhhheeeechhhhhhhcCccccCCCcchhhhccCCcccchhhhheeeeeeeeeccCccceecC
Confidence 9999999999974321 1345677788999999999876
No 6
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2.4e-28 Score=223.64 Aligned_cols=142 Identities=48% Similarity=0.738 Sum_probs=125.4
Q ss_pred CeEEEEeeeeeceEEEEEEeCCCCCCcCceeEeeEeeccceecCCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHH
Q 010619 234 SYRLIASKQMVGIFLSVWVRNDLVPHIGHLRFSSVGRGIMGCLGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRN 313 (506)
Q Consensus 234 ~Y~~v~s~qmvGi~L~Vfvr~~l~~~I~~v~~~~v~tGi~G~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN 313 (506)
.|+++.+.+|+|+.+.+|++.++..++.+++++++++|++|++||||+|++++.++++++|||||||+||.++.+ .+||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~nkg~v~is~~~~~~~~~~v~~hl~~~~~~~~-~~r~ 80 (145)
T KOG0565|consen 2 LYVVVASGRLVGIDLSVLLRRDLLDHSFNVRVSEVGTGIMGYLGNKGGVAISFVLSQTSFCFVISHLTSGVHKVY-ERRN 80 (145)
T ss_pred cEEEEeeeEEEEEEEEEEehhhhhhhhcccEEEEecceEEEEeCCCCeEEEEEEEcCceEEEEEecccccchhhH-HHhh
Confidence 699999999999999999999999999999999999999999999999999999999999999999999998643 3499
Q ss_pred HHHHHHHHhcCCCcccCCCCCCCCCCcccc-cccEEEeccccceeecC-HHHHHHHHhcCChHHHHhhh
Q 010619 314 ADVAEILKSTQFPKICKGPNPRTAPERIID-HDRVIWLGDLNYRVALS-YEKTRLLLEDNDWDSLLEKD 380 (506)
Q Consensus 314 ~D~~~Il~~~~F~~~~~~~~~~~~~~~i~d-hD~vfw~GDLNYRI~l~-~~ev~~li~~~~~~~LL~~D 380 (506)
+|+.+|++.+.|+..... ..+..+.. ||.|||+||||||+..+ +.+++.++..+.|+.|+++|
T Consensus 81 ~d~~~i~~~~~~~~~~~~----~~~~~~~~~~D~v~w~GDlN~Rl~~~~~~~~~~~~~~~~~~~l~~~d 145 (145)
T KOG0565|consen 81 EDYQEILNGLRFPSVSPA----SEPVISDGEHDTVIWLGDLNYRLSGPSYLEVRTLISVKSRDGLLEKD 145 (145)
T ss_pred ccHHHHHhhccccccCcc----cccccccccccEEEEecceeeeecCcccccchhhhhhcchhhhhccC
Confidence 999999999999754221 12223332 89999999999999987 88889999999999888876
No 7
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=99.74 E-value=5e-19 Score=177.13 Aligned_cols=167 Identities=28% Similarity=0.419 Sum_probs=106.4
Q ss_pred cCCceEEEEEEEEeceEEEEEeecCCCCCCCcc---------HHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccccccc
Q 010619 276 LGNKGCTSISMSVYNTSFCFVCCHLASGEKEGD---------ELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDR 346 (506)
Q Consensus 276 ~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~---------~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~ 346 (506)
++.||-.-.|++|++..|.|||.||-...++-. -..|.+.+.-+|+.+. +.-+..|.
T Consensus 154 ~~rkg~~~~r~~I~~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~--------------~~~~~~~~ 219 (391)
T KOG1976|consen 154 NQRKGFLLARFRIHGKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELD--------------EEGLRNDA 219 (391)
T ss_pred hhhccccceeEEEcCceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHH--------------hhccCceE
Confidence 678999999999999999999999976654310 0223333333443331 12234679
Q ss_pred EEEeccccceeecCH-----------HHHH--------HHH---------------hcCChH-------------HHHhh
Q 010619 347 VIWLGDLNYRVALSY-----------EKTR--------LLL---------------EDNDWD-------------SLLEK 379 (506)
Q Consensus 347 vfw~GDLNYRI~l~~-----------~ev~--------~li---------------~~~~~~-------------~LL~~ 379 (506)
+|.|||||||++-.. +.+. ++| +.+.|+ .++.+
T Consensus 220 ~fVfGdfNfrLds~s~ln~l~a~q~~qtv~~~d~~~vv~~ifr~esd~drkv~l~vEkk~FDyfnh~~f~d~~r~~~~~~ 299 (391)
T KOG1976|consen 220 IFVFGDFNFRLDSTSLLNYLAATQLVQTVAKKDEDGVVESIFRVESDGDRKVTLTVEKKRFDYFNHDWFFDLGRGMVKRY 299 (391)
T ss_pred EEEecccccccchHHHHHHHhcCCccchhhhcccCcceeeEEeecccCCceeEEEeehhhcchhhhHHHHHcCchhhhhc
Confidence 999999999997321 1111 111 112122 22222
Q ss_pred hhhHHHHhcCcccCC-ccccccccCCcccccCCCCCCCCccccCCCCccCcccCcceeecCCC----------ceeeeec
Q 010619 380 DQLNIERESGRAFNG-FNEGRIFFAPTYKYSHNSDCYAGETVKSKKKRRTPAWCDRILWRGNG----------IEQLSYI 448 (506)
Q Consensus 380 DQL~~e~~~g~~F~g-f~Eg~I~F~PTYKy~~gsd~Yd~~~~~ss~K~R~PSWcDRIL~~~~~----------i~~l~Y~ 448 (506)
|- .-..|+. ..|..|.|||||.|..+...=. ...+.|+||||||||+.... -..+.|.
T Consensus 300 dk------El~nf~~kl~E~~i~FpPsypysed~~~~E-----~~m~TrcPAWcDRILmn~~a~eLv~~~e~e~~~~~Y~ 368 (391)
T KOG1976|consen 300 DK------ELANFAFKLKEETIFFPPSYPYSEDDSGKE-----EFMRTRCPAWCDRILMNDRANELVKHDEFEASGLYYG 368 (391)
T ss_pred ch------HHHHHHHHHhheeecCCCCCCCCcCccchH-----HHHhccChHhhhhhhcCccHHHHhhccccCcccceec
Confidence 20 0113433 7899999999999987643211 13578999999999997542 1235576
Q ss_pred c--CCCccCCCcccccEEEEE
Q 010619 449 R--GESRFSDHRPVCAVFSVE 467 (506)
Q Consensus 449 ~--~e~~~SDHrPV~a~F~v~ 467 (506)
. .+.++.|||||+..|.+-
T Consensus 369 ~vg~e~c~GdHKpVfl~~~i~ 389 (391)
T KOG1976|consen 369 LVGEEKCVGDHKPVFLHASIC 389 (391)
T ss_pred ccccccccCCCcceEEEEeec
Confidence 4 578999999999998874
No 8
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=98.21 E-value=1e-06 Score=82.52 Aligned_cols=97 Identities=22% Similarity=0.250 Sum_probs=53.7
Q ss_pred eceEEEEEEeCCCCCCcCceeEeeEeeccc---eecCCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHH
Q 010619 244 VGIFLSVWVRNDLVPHIGHLRFSSVGRGIM---GCLGNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEIL 320 (506)
Q Consensus 244 vGi~L~Vfvr~~l~~~I~~v~~~~v~tGi~---G~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il 320 (506)
.+..+.|+.|.++...+........+.+.. ....+++.+.+++. +..|+++++|+.++.. .|..+..+++
T Consensus 72 ~~~g~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~~~H~~~~~~-----~~~~~~~~~~ 144 (249)
T PF03372_consen 72 GGYGVAILSRSPIFSSVSYVFSLFSKPGIRIFRRSSKSKGIVPVSIN--GKPITVVNVHLPSSND-----ERQEQWRELL 144 (249)
T ss_dssp SSEEEEEEESSCCCEEEEEEEEEESSSTTCEEEEEEEEEEEEEEEEE--TEEEEEEEEETTSHHH-----HHHHHHHHHH
T ss_pred cCceEEEEEcccccccccccccccccccccccccccccccccccccc--ceEEEeeeccccccch-----hhhhhhhhhh
Confidence 566778888888654444433332233332 23456666667666 9999999999998542 2332233333
Q ss_pred HhcCCCcccCCCCCCCCCCcccccccEEEeccccceeec
Q 010619 321 KSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRVAL 359 (506)
Q Consensus 321 ~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI~l 359 (506)
..+.-. ... .....+|++||||.+..-
T Consensus 145 ~~~~~~--~~~----------~~~~~~iv~GDfN~~~~~ 171 (249)
T PF03372_consen 145 ARIQKI--YAD----------NPNEPVIVMGDFNSRPDS 171 (249)
T ss_dssp HHHHHH--HHT----------SSCCEEEEEEE-SS-BSS
T ss_pred hhhhhc--ccc----------cccceEEEEeecccCCcc
Confidence 322100 000 001169999999998864
No 9
>PRK05421 hypothetical protein; Provisional
Probab=98.20 E-value=1.4e-05 Score=80.25 Aligned_cols=128 Identities=19% Similarity=0.212 Sum_probs=73.9
Q ss_pred CceEEEEEEEE-eceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEeccccce
Q 010619 278 NKGCTSISMSV-YNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYR 356 (506)
Q Consensus 278 NKGaVavr~~l-~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYR 356 (506)
-||++.+.+.+ .+..|.++|+||.+.... ...|..++..|.+.+. . ....+|++||||=.
T Consensus 134 ~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~--~~~r~~q~~~l~~~~~--~---------------~~~p~Il~GDFN~~ 194 (263)
T PRK05421 134 PKSALITEYPLPNGRTLLVVNIHAINFSLG--VDVYSKQLEPIGDQIA--H---------------HSGPVILAGDFNTW 194 (263)
T ss_pred cceeEEEEEEeCCCCEEEEEEECccccCcC--hHHHHHHHHHHHHHHH--h---------------CCCCEEEEcccccC
Confidence 37899999988 667899999999865322 3457777877765431 0 02469999999931
Q ss_pred eecCHHHHHHHHhcCChHHHHhhhhhHHHHhcCcccCCccccccccCCcccccCCCCCCCCccccCCCCccCcccCccee
Q 010619 357 VALSYEKTRLLLEDNDWDSLLEKDQLNIERESGRAFNGFNEGRIFFAPTYKYSHNSDCYAGETVKSKKKRRTPAWCDRIL 436 (506)
Q Consensus 357 I~l~~~ev~~li~~~~~~~LL~~DQL~~e~~~g~~F~gf~Eg~I~F~PTYKy~~gsd~Yd~~~~~ss~K~R~PSWcDRIL 436 (506)
-....+.. . ++..+. ++.. .+|++.-.+ ..+ ..|+ |+||
T Consensus 195 ~~~~~~~l---------~------~~~~~~-------~l~~--~~~~~~~~~----~~~---------~~~I----D~I~ 233 (263)
T PRK05421 195 SRKRMNAL---------K------RFAREL-------GLKE--VRFTDDQRR----RAF---------GRPL----DFVF 233 (263)
T ss_pred cccchHHH---------H------HHHHHc-------CCCc--cCcCCcccc----ccc---------CCCc----ceEE
Confidence 11000011 1 111110 1111 134432211 001 1233 9999
Q ss_pred ecCCCceeeeeccCCCccCCCcccccEEEEE
Q 010619 437 WRGNGIEQLSYIRGESRFSDHRPVCAVFSVE 467 (506)
Q Consensus 437 ~~~~~i~~l~Y~~~e~~~SDHrPV~a~F~v~ 467 (506)
.+ ++...++...+...|||+||.|.|.+.
T Consensus 234 ~~--~~~v~~~~v~~~~~SDH~Pv~a~l~l~ 262 (263)
T PRK05421 234 YR--GLNVSKASVLVTRASDHNPLLVEFSLK 262 (263)
T ss_pred EC--CcEEEEEEcCCCCCCCccCEEEEEEec
Confidence 85 455555554567799999999998764
No 10
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=98.20 E-value=2.4e-05 Score=79.80 Aligned_cols=147 Identities=19% Similarity=0.238 Sum_probs=86.9
Q ss_pred ecCCceEEEEEEEEeceEEEEEeecCCCCCCC----ccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEe
Q 010619 275 CLGNKGCTSISMSVYNTSFCFVCCHLASGEKE----GDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWL 350 (506)
Q Consensus 275 ~~GNKGaVavr~~l~~ts~cFVn~HLaAg~~~----~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~ 350 (506)
...+||.+.+++.+.+..+.|+|.||.+.... .....|..++.+|.+.+.-. .+-..+.+|++
T Consensus 117 ~~~~kg~l~a~i~~~g~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~-------------~~~~~~pvIl~ 183 (283)
T TIGR03395 117 NLSNKGFAYVKINKNGKKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSK-------------NIPKDETVLIG 183 (283)
T ss_pred cccCCceEEEEEecCCeEEEEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhc-------------cCCCCceEEEE
Confidence 35789999999999999999999999875311 11456888899887654210 11123579999
Q ss_pred ccccceeecCHHHHHHHHhcCChHHHHhhhhhHHHHhcCcccCCccccccccCCcccccCCCCCCCCccccCCCCccCcc
Q 010619 351 GDLNYRVALSYEKTRLLLEDNDWDSLLEKDQLNIERESGRAFNGFNEGRIFFAPTYKYSHNSDCYAGETVKSKKKRRTPA 430 (506)
Q Consensus 351 GDLNYRI~l~~~ev~~li~~~~~~~LL~~DQL~~e~~~g~~F~gf~Eg~I~F~PTYKy~~gsd~Yd~~~~~ss~K~R~PS 430 (506)
||||-.=+ ..+.. ++........ .+|. .|.|-||...+.|.... . .+=.|.
T Consensus 184 GDfN~~~~--s~~~~---------------~ml~~l~~~~--p~~~------g~~~T~d~~~N~~a~~~---~-~~~~~~ 234 (283)
T TIGR03395 184 GDLNVNKG--SNEYH---------------DMFKTLNVSE--PRYV------GVPATWDATTNSIAKYY---Y-PKEEPE 234 (283)
T ss_pred eeCCCCCC--CHHHH---------------HHHHHhcccC--CCcC------CCCCCcCCCcCchhhhh---c-CCCCcc
Confidence 99997532 12212 1111111111 1121 24556677667665321 1 123467
Q ss_pred cCcceeecCCCce----------eee-e---cc-CCCccCCCcccccE
Q 010619 431 WCDRILWRGNGIE----------QLS-Y---IR-GESRFSDHRPVCAV 463 (506)
Q Consensus 431 WcDRIL~~~~~i~----------~l~-Y---~~-~e~~~SDHrPV~a~ 463 (506)
+-|+||+++...+ ..+ + .. .-..+|||-||++.
T Consensus 235 ~lDyvl~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sdh~~v~~~ 282 (283)
T TIGR03395 235 YLDYIFVSKSHAQPPVWQNKVLDPKSVTSWFKKYTYDDFSDHYPVYGF 282 (283)
T ss_pred eEEEEEEECCCCCCccccceEEeccccccccccccccccccccceeee
Confidence 9999999864211 111 0 01 12357999999875
No 11
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=98.02 E-value=0.00012 Score=73.57 Aligned_cols=36 Identities=31% Similarity=0.536 Sum_probs=25.6
Q ss_pred EEEeeCCCCCCCCCCCcccccCCCCCCcEEEEeeEEEEec
Q 010619 45 AATWNVGGKTPSNSLNLEDFLEVECSADIYVCGFQEIVKL 84 (506)
Q Consensus 45 vgTWNV~g~~p~~~ldl~~wl~~~~~~DiyviGfQEiV~L 84 (506)
|+||||||..-...-.+.+||. +..||| |+|||+ .+
T Consensus 3 i~swNVNgir~~~~~~~~~~l~-~~~~DI--iclQEt-K~ 38 (250)
T PRK13911 3 LISWNVNGLRACMTKGFMDFFN-SVDADV--FCIQES-KM 38 (250)
T ss_pred EEEEEeCChhHhhhhhHHHHHH-hcCCCE--EEEEee-cc
Confidence 7899999985433234678986 456886 568996 44
No 12
>PRK11756 exonuclease III; Provisional
Probab=97.09 E-value=0.0018 Score=64.63 Aligned_cols=65 Identities=9% Similarity=0.161 Sum_probs=37.7
Q ss_pred CceEEEEEEEEeceEEEEEeecCCCCCCC---ccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEecccc
Q 010619 278 NKGCTSISMSVYNTSFCFVCCHLASGEKE---GDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLN 354 (506)
Q Consensus 278 NKGaVavr~~l~~ts~cFVn~HLaAg~~~---~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLN 354 (506)
..+.+.+.+...+..|.|+|+|++.+... .....|..-+..|...+.- .......+|++||||
T Consensus 88 ~~r~l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~--------------~~~~~~pvIl~GDfN 153 (268)
T PRK11756 88 QRRIIMATIPTPNGNLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLET--------------ELSPDNPLLIMGDMN 153 (268)
T ss_pred cCCEEEEEEEcCCCCEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHH--------------HhccCCCEEEEeecc
Confidence 35788888887655699999999876421 1111233333333322210 001234799999999
Q ss_pred ce
Q 010619 355 YR 356 (506)
Q Consensus 355 YR 356 (506)
--
T Consensus 154 ~~ 155 (268)
T PRK11756 154 IS 155 (268)
T ss_pred cC
Confidence 53
No 13
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.07 E-value=0.0054 Score=59.97 Aligned_cols=34 Identities=32% Similarity=0.500 Sum_probs=22.5
Q ss_pred EEEEeeCCCCCCCCCCCc-ccccCCCCCCcEEEEeeEEE
Q 010619 44 YAATWNVGGKTPSNSLNL-EDFLEVECSADIYVCGFQEI 81 (506)
Q Consensus 44 fvgTWNV~g~~p~~~ldl-~~wl~~~~~~DiyviGfQEi 81 (506)
-|.||||+|...... .+ .+||. +..|||+ +|||+
T Consensus 2 ri~t~Nv~g~~~~~~-~~~~~~l~-~~~~DIv--~LQE~ 36 (255)
T TIGR00633 2 KIISWNVNGLRARLH-KLFLDWLK-EEQPDVL--CLQET 36 (255)
T ss_pred EEEEEecccHHHHhh-ccHHHHHH-hcCCCEE--EEEec
Confidence 478999999654322 23 56765 3467875 67995
No 14
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=97.07 E-value=0.0033 Score=63.73 Aligned_cols=61 Identities=23% Similarity=0.402 Sum_probs=45.5
Q ss_pred CceEEEEEEEEe-ceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEecccc--
Q 010619 278 NKGCTSISMSVY-NTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLN-- 354 (506)
Q Consensus 278 NKGaVavr~~l~-~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLN-- 354 (506)
-.|++-+.+... +..|-+||+||.=.+ ..|.++...|++...++. ...++++||||
T Consensus 118 ~Rgal~a~~~~~~g~~l~V~~~HL~l~~-----~~R~~Q~~~L~~~~~l~~----------------~~p~vl~GDFN~~ 176 (259)
T COG3568 118 PRGALLAEIELPGGKPLRVINAHLGLSE-----ESRLRQAAALLALAGLPA----------------LNPTVLMGDFNNE 176 (259)
T ss_pred CceeEEEEEEcCCCCEEEEEEEeccccH-----HHHHHHHHHHHhhccCcc----------------cCceEEEccCCCC
Confidence 378999999884 779999999998543 458888888887433321 12799999999
Q ss_pred -----ceeec
Q 010619 355 -----YRVAL 359 (506)
Q Consensus 355 -----YRI~l 359 (506)
||+..
T Consensus 177 p~s~~yr~~~ 186 (259)
T COG3568 177 PGSAEYRLAA 186 (259)
T ss_pred CCCccceecc
Confidence 77754
No 15
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=96.68 E-value=0.016 Score=58.96 Aligned_cols=60 Identities=27% Similarity=0.377 Sum_probs=40.0
Q ss_pred EEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEeccccceee
Q 010619 285 SMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRVA 358 (506)
Q Consensus 285 r~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI~ 358 (506)
-..+.|..+||.++||.+-.. ...+|.+.|...+++++= -+ .++-.-.||+-||+|.|=.
T Consensus 198 Ev~v~G~Kl~l~tsHLEStr~--h~P~r~~qF~~~~~k~~E-aI-----------e~lPnA~ViFGGD~NlrD~ 257 (349)
T KOG2756|consen 198 EVNVSGNKLCLMTSHLESTRG--HAPERMNQFKMVLKKMQE-AI-----------ESLPNATVIFGGDTNLRDR 257 (349)
T ss_pred EEeecCceEEEEeccccCCCC--CChHHHHHHHHHHHHHHH-HH-----------HhCCCceEEEcCcccchhh
Confidence 334566678999999998653 246788888877766430 00 0112346999999999753
No 16
>PTZ00297 pantothenate kinase; Provisional
Probab=96.39 E-value=0.024 Score=69.66 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=40.7
Q ss_pred cCCceEEEEEEEEe----c-eEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcC--CCcccCCCCCCCCCCcccccccEE
Q 010619 276 LGNKGCTSISMSVY----N-TSFCFVCCHLASGEKEGDELKRNADVAEILKSTQ--FPKICKGPNPRTAPERIIDHDRVI 348 (506)
Q Consensus 276 ~GNKGaVavr~~l~----~-ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~--F~~~~~~~~~~~~~~~i~dhD~vf 348 (506)
..+||.+-+.+.+. + ..+-|+|.||....... .|.+++.+|.+-+. ...... ...+.....+|
T Consensus 130 ~~~RG~L~a~I~vp~~~g~~~~v~v~~tHL~~~~~~~---~R~~Q~~ql~~~i~~~i~~~~~-------~~~~~~~~PvI 199 (1452)
T PTZ00297 130 SVRRGCLFAEVEVPLAEGGSQRIVFFNVHLRQEDSLP---STSSQVQETRRFVESVIANVYE-------QNNDGAEIPFV 199 (1452)
T ss_pred ccccceEEEEEEccccCCCCceEEEEEeCCCCCCCcc---hHHHHHHHHHHHHHHhhhhhcc-------cccCCCCCCEE
Confidence 35899999999884 2 57999999999875431 23344444432211 000000 01112345799
Q ss_pred Eecccc
Q 010619 349 WLGDLN 354 (506)
Q Consensus 349 w~GDLN 354 (506)
++||||
T Consensus 200 LaGDFN 205 (1452)
T PTZ00297 200 IAGDFN 205 (1452)
T ss_pred EEeeCC
Confidence 999999
No 17
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=93.05 E-value=0.47 Score=46.94 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=22.3
Q ss_pred EEEEeeCCCCCCCCCCCcccccCCCCCCcEEEEeeEEE
Q 010619 44 YAATWNVGGKTPSNSLNLEDFLEVECSADIYVCGFQEI 81 (506)
Q Consensus 44 fvgTWNV~g~~p~~~ldl~~wl~~~~~~DiyviGfQEi 81 (506)
-|+||||+|...... .+-.||.. ..|||++ |||.
T Consensus 2 ri~t~Ni~g~~~~~~-~~~~~l~~-~~~DIi~--LQE~ 35 (254)
T TIGR00195 2 KIISWNVNGLRARLH-KGLAWLKE-NQPDVLC--LQET 35 (254)
T ss_pred EEEEEEcCcHHHhHH-HHHHHHHh-cCCCEEE--EEec
Confidence 378999999643221 24667653 4578765 8994
No 18
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=91.19 E-value=0.067 Score=45.90 Aligned_cols=33 Identities=27% Similarity=0.241 Sum_probs=17.3
Q ss_pred cccCcceeecCCCcee-eeeccCCCccCCCcccc
Q 010619 429 PAWCDRILWRGNGIEQ-LSYIRGESRFSDHRPVC 461 (506)
Q Consensus 429 PSWcDRIL~~~~~i~~-l~Y~~~e~~~SDHrPV~ 461 (506)
.+-=|+||........ ..-.......|||+||.
T Consensus 86 ~s~iD~~~~s~~~~~~~~~~~~~~~~~SDH~~I~ 119 (119)
T PF14529_consen 86 GSRIDLILTSDNLLSWCVWVISSDDSGSDHCPIT 119 (119)
T ss_dssp EE--EEEEEECCGCCCEEEEEETTSSSSSB--EE
T ss_pred CceEEEEEECChHHhcCcEEEeCCCCCCCccCCC
Confidence 5667899987653222 11122456789999985
No 19
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=90.60 E-value=2 Score=48.86 Aligned_cols=63 Identities=19% Similarity=0.263 Sum_probs=39.6
Q ss_pred EEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEeccccceeecCHHHHHHHHhcC
Q 010619 292 SFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRVALSYEKTRLLLEDN 371 (506)
Q Consensus 292 s~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI~l~~~ev~~li~~~ 371 (506)
.||++|+||-.+....+ -|..+...|++.+.- ... . ..-.+|++||||- .+...+-+++.+|
T Consensus 418 ~l~VaNTHL~~~p~~~d--vRl~Q~~~Ll~~l~~--~~~-------~----~~~PvIlcGDFNS---~P~S~vy~lLt~G 479 (606)
T PLN03144 418 LLCVANTHIHANQELKD--VKLWQVHTLLKGLEK--IAA-------S----ADIPMLVCGDFNS---VPGSAPHCLLATG 479 (606)
T ss_pred EEEEEEeeeccCCccch--hHHHHHHHHHHHHHH--Hhh-------c----CCCceEEeccCCC---CCCChhhhhhhcC
Confidence 69999999976654333 366666667665421 000 0 0125899999995 4555677777766
Q ss_pred C
Q 010619 372 D 372 (506)
Q Consensus 372 ~ 372 (506)
.
T Consensus 480 ~ 480 (606)
T PLN03144 480 K 480 (606)
T ss_pred C
Confidence 4
No 20
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=90.31 E-value=1.1 Score=47.51 Aligned_cols=198 Identities=22% Similarity=0.291 Sum_probs=104.6
Q ss_pred EeeeeeceEEEEEEeCCCCCCcCce---e--EeeEeeccceecCCceEEEEEEEEeceEEEEEeecCCCC-CCCcc--HH
Q 010619 239 ASKQMVGIFLSVWVRNDLVPHIGHL---R--FSSVGRGIMGCLGNKGCTSISMSVYNTSFCFVCCHLASG-EKEGD--EL 310 (506)
Q Consensus 239 ~s~qmvGi~L~Vfvr~~l~~~I~~v---~--~~~v~tGi~G~~GNKGaVavr~~l~~ts~cFVn~HLaAg-~~~~~--~~ 310 (506)
.|--| |-.|+||-|-.+..-.-+. . -..+=.| --.|-||--..++.+.+..+.+-|+||-|- .+++| ..
T Consensus 74 HSGim-GaGL~vfSK~PI~~t~~~~y~lNG~p~~i~rG--DWf~GK~Vgl~~l~~~g~~v~~yntHLHAeY~rq~D~YL~ 150 (422)
T KOG3873|consen 74 HSGIM-GAGLCVFSKHPILETLFHRYSLNGYPHAIHRG--DWFGGKGVGLTVLLVGGRMVNLYNTHLHAEYDRQNDEYLC 150 (422)
T ss_pred hcccc-cCceEEeecCchhhhhhhccccCCccceeeec--cccccceeEEEEEeeCCEEeeeeehhccccccccCchhhh
Confidence 44445 7789999988765432221 1 1112222 235778887888899999999999999873 22233 34
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEecccccee-ecCHHHHH--HHHhcCChHHHHhhhhhHHHHh
Q 010619 311 KRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRV-ALSYEKTR--LLLEDNDWDSLLEKDQLNIERE 387 (506)
Q Consensus 311 rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI-~l~~~ev~--~li~~~~~~~LL~~DQL~~e~~ 387 (506)
.|-.+.-++-+-+ +- +-...|.||..||||-+= +++..-.. .++ ..|..| .-||+-.--.
T Consensus 151 HR~~QAwdlaqfi---~~-----------t~q~~~vVI~~GDLN~~P~dl~~~ll~~a~l~--daw~~~-h~~q~e~~~~ 213 (422)
T KOG3873|consen 151 HRVAQAWDLAQFI---RA-----------TRQNADVVILAGDLNMQPQDLGHKLLLSAGLV--DAWTSL-HLDQCESDSF 213 (422)
T ss_pred HHHHHHHHHHHHH---HH-----------HhcCCcEEEEecCCCCCccccceeeeeccchh--hhHhhh-chhhhcCccc
Confidence 5666555554322 11 112468999999999764 34432111 111 112221 2233322111
Q ss_pred cCcccCCccccccccCCcccccCCCCCCCCccccCCCCccCcc----cCcceeecCCC--ceeeeec----c---CCCcc
Q 010619 388 SGRAFNGFNEGRIFFAPTYKYSHNSDCYAGETVKSKKKRRTPA----WCDRILWRGNG--IEQLSYI----R---GESRF 454 (506)
Q Consensus 388 ~g~~F~gf~Eg~I~F~PTYKy~~gsd~Yd~~~~~ss~K~R~PS----WcDRIL~~~~~--i~~l~Y~----~---~e~~~ 454 (506)
....|++.-||- | .+.--++|. +..+|.|- =-|-||+++.. ++...|. + .+..+
T Consensus 214 r~s~~~~l~~g~-----t--cd~~~N~y~------~aqk~~ddp~~~RiDYvl~k~~~~~~~~a~~~~t~~rvP~~d~s~ 280 (422)
T KOG3873|consen 214 RLSEDKELVEGN-----T--CDSPLNCYT------SAQKREDDPLGKRIDYVLVKPGDCNAKIAEVEFTEPRVPGEDCSY 280 (422)
T ss_pred ccchhhhhhcCC-----c--ccCcchhhh------HHHhCCCCccceeeeEEEEcCcceEEEeeeEEecCCCCCCCCCCc
Confidence 122234444554 1 222223443 11222222 14778888653 2222221 2 24678
Q ss_pred CCCcccccEEEEEec
Q 010619 455 SDHRPVCAVFSVEVE 469 (506)
Q Consensus 455 SDHrPV~a~F~v~v~ 469 (506)
|||--+.|++.+.-.
T Consensus 281 SDH~Al~a~L~I~~~ 295 (422)
T KOG3873|consen 281 SDHEALMATLKIFKQ 295 (422)
T ss_pred cchhhheeEEEeecC
Confidence 999999999988765
No 21
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=88.31 E-value=0.099 Score=53.21 Aligned_cols=33 Identities=39% Similarity=0.536 Sum_probs=22.9
Q ss_pred EEEeeCCCCCCCCCCCcccccCCCCCCcEEEEeeEEE
Q 010619 45 AATWNVGGKTPSNSLNLEDFLEVECSADIYVCGFQEI 81 (506)
Q Consensus 45 vgTWNV~g~~p~~~ldl~~wl~~~~~~DiyviGfQEi 81 (506)
+.||||||.--.-.. +-+||..+. ||| |++||+
T Consensus 3 I~SwNVNgiRar~~~-~~~~l~~~~-pDV--lclQEt 35 (261)
T COG0708 3 IASWNVNGLRARLKK-LLDWLEEEQ-PDV--LCLQET 35 (261)
T ss_pred eEEEehhhHHHHHHH-HHHHHHHhC-CCE--EEEEec
Confidence 689999997432222 578886544 485 678996
No 22
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=82.97 E-value=5.2 Score=41.12 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=51.2
Q ss_pred CeEEEEeeeee----ceEEEEEEeCCCCCCcCceeEeeEeeccceecCCceEEEEEEEEece---EEEEEeecCCCCCCC
Q 010619 234 SYRLIASKQMV----GIFLSVWVRNDLVPHIGHLRFSSVGRGIMGCLGNKGCTSISMSVYNT---SFCFVCCHLASGEKE 306 (506)
Q Consensus 234 ~Y~~v~s~qmv----Gi~L~Vfvr~~l~~~I~~v~~~~v~tGi~G~~GNKGaVavr~~l~~t---s~cFVn~HLaAg~~~ 306 (506)
.|..+.+..+. |-...++-|++.+..+..-...-..-|- +-.=..=...++|+...+ .|.+|++|+.+..
T Consensus 79 ~Y~~v~s~r~gr~~~~E~~a~~Yr~drv~v~~~~~f~d~~~~~-~~~F~ReP~~~~F~~~~~~~~~F~li~~H~~p~~-- 155 (276)
T smart00476 79 TYSYVSSEPLGRNSYKEQYLFLYRSDLVSVLDSYLYDDGCECG-NDVFSREPFVVKFSSPSTAVKEFVIVPLHTTPEA-- 155 (276)
T ss_pred CceEEecCCCCCCCCCEEEEEEEecceEEEcccceecCCCCCc-cccccccceEEEEEeCCCCCccEEEEEecCChHH--
Confidence 45555554432 3555666677654333321111000000 000123355677777665 7999999998853
Q ss_pred ccHHHHHHHHHH-HHHhcCCCcccCCCCCCCCCCcccccccEEEecccccee
Q 010619 307 GDELKRNADVAE-ILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRV 357 (506)
Q Consensus 307 ~~~~rRN~D~~~-Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI 357 (506)
..++...+.+ ++.... .. ..+-||++||||=--
T Consensus 156 --~~~e~~aL~~v~~~~~~---------------~~-~~~~villGDFNa~~ 189 (276)
T smart00476 156 --AVAEIDALYDVYLDVRQ---------------KW-GTEDVIFMGDFNAGC 189 (276)
T ss_pred --HHHHHHHHHHHHHHHHH---------------hh-ccCCEEEEccCCCCC
Confidence 2233333222 222110 00 135699999999643
No 23
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=82.04 E-value=2.5 Score=46.51 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=57.8
Q ss_pred EEEEEeCCCCCCcCc--eeEeeEeeccceecCCceEEEEEEEEece---EEEEEeecCCCCCCCccHHHHHHHHHHHHHh
Q 010619 248 LSVWVRNDLVPHIGH--LRFSSVGRGIMGCLGNKGCTSISMSVYNT---SFCFVCCHLASGEKEGDELKRNADVAEILKS 322 (506)
Q Consensus 248 L~Vfvr~~l~~~I~~--v~~~~v~tGi~G~~GNKGaVavr~~l~~t---s~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~ 322 (506)
++|+-+..+...+-+ |...-.+.|++..--=++.|+.+|++-+. -++..|.||--+....++ |-.....|++.
T Consensus 204 ~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np~~~~v--rL~Q~~iiL~~ 281 (495)
T KOG2338|consen 204 VAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNPSRSDV--RLAQVYIILAE 281 (495)
T ss_pred EEEEEecccceecccchhhcccccchhhcccceeEEEEEEecccCcccCceEEEeeeeeecCcccch--hhHHHHHHHHH
Confidence 444555554444433 23334556655432224566777766655 899999999988776554 77788888876
Q ss_pred cC-CCcccCCCCCCCCCCcccccccEEEeccccc
Q 010619 323 TQ-FPKICKGPNPRTAPERIIDHDRVIWLGDLNY 355 (506)
Q Consensus 323 ~~-F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNY 355 (506)
+. |... .. .|=.||++||||-
T Consensus 282 ~~~~~~~----------~~--~~~pi~l~GDfNt 303 (495)
T KOG2338|consen 282 LEKMSKS----------SK--SHWPIFLCGDFNT 303 (495)
T ss_pred HHHHHhh----------cc--cCCCeEEecCCCC
Confidence 53 1110 00 3558999999984
No 24
>PRK11756 exonuclease III; Provisional
Probab=77.04 E-value=0.75 Score=45.94 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=21.2
Q ss_pred EEEeeCCCCCCCCCCCcccccCCCCCCcEEEEeeEEE
Q 010619 45 AATWNVGGKTPSNSLNLEDFLEVECSADIYVCGFQEI 81 (506)
Q Consensus 45 vgTWNV~g~~p~~~ldl~~wl~~~~~~DiyviGfQEi 81 (506)
|.||||+|..-.- -.+.+||.. ..|||++ |||+
T Consensus 3 i~T~Nv~g~~~~~-~~i~~~i~~-~~pDIi~--LQE~ 35 (268)
T PRK11756 3 FVSFNINGLRARP-HQLEAIIEK-HQPDVIG--LQET 35 (268)
T ss_pred EEEEEcCCHHHHH-HHHHHHHHh-cCCCEEE--EEec
Confidence 6799999853210 014667653 4589765 9995
No 25
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=73.80 E-value=0.86 Score=42.44 Aligned_cols=14 Identities=29% Similarity=0.347 Sum_probs=9.5
Q ss_pred CccCcccCcceeec
Q 010619 425 KRRTPAWCDRILWR 438 (506)
Q Consensus 425 K~R~PSWcDRIL~~ 438 (506)
+.+.|++.|+||+.
T Consensus 214 ~~~~~~~iD~i~~s 227 (249)
T PF03372_consen 214 KNGEPSRIDYIFVS 227 (249)
T ss_dssp TCTEEB--EEEEEE
T ss_pred CCCCCccEEEEEEE
Confidence 45778899999994
No 26
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=66.58 E-value=2.3 Score=42.02 Aligned_cols=52 Identities=15% Similarity=0.219 Sum_probs=27.2
Q ss_pred EEEEEeecCCCCCCCc--cHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEecccccee
Q 010619 292 SFCFVCCHLASGEKEG--DELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRV 357 (506)
Q Consensus 292 s~cFVn~HLaAg~~~~--~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI 357 (506)
.|.++|.|++++.... ....|.+-+..+.+.+. .. ......+|++||||-..
T Consensus 98 ~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~--~~------------~~~~~pvIi~GDfN~~~ 151 (254)
T TIGR00195 98 SFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLE--KL------------VDKDKPVLICGDMNIAP 151 (254)
T ss_pred CEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHH--HH------------HhcCCcEEEEeecccCC
Confidence 4789999999853221 12223333333332221 00 00124699999999544
No 27
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.14 E-value=3.4 Score=43.15 Aligned_cols=59 Identities=24% Similarity=0.239 Sum_probs=37.7
Q ss_pred CCceEEEEEEEE-eceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccccc-ccEEEecccc
Q 010619 277 GNKGCTSISMSV-YNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDH-DRVIWLGDLN 354 (506)
Q Consensus 277 GNKGaVavr~~l-~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dh-D~vfw~GDLN 354 (506)
+-||++.+.-.. +++.+..+|.|...-.-..+ ..| +...++.+.+. .| --+|+.||||
T Consensus 173 ~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~-~~~-~ql~~l~~~i~------------------~~~gpvIlaGDfN 232 (309)
T COG3021 173 LPKSALATAYPLPDGTELTVVALHAVNFPVGTD-PQR-AQLLELGDQIA------------------GHSGPVILAGDFN 232 (309)
T ss_pred CCccceeEEEEcCCCCEEEEEeeccccccCCcc-HHH-HHHHHHHHHHH------------------cCCCCeEEeecCC
Confidence 568877766654 57999999999874322222 344 55555554432 11 3589999998
Q ss_pred c
Q 010619 355 Y 355 (506)
Q Consensus 355 Y 355 (506)
=
T Consensus 233 a 233 (309)
T COG3021 233 A 233 (309)
T ss_pred C
Confidence 5
No 28
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=59.23 E-value=7.9 Score=39.85 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=35.2
Q ss_pred CCceEEEEEEEEeceEEEEEeecCCCCCCCccHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEecccc
Q 010619 277 GNKGCTSISMSVYNTSFCFVCCHLASGEKEGDELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLN 354 (506)
Q Consensus 277 GNKGaVavr~~l~~ts~cFVn~HLaAg~~~~~~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLN 354 (506)
..+..+++++ .+ +.|.+.||.+.... .|.+-+..|..-+. +. ..+.-++++||||
T Consensus 140 ~~Rpilgi~i--~~--~~ffstH~~a~~~~----da~aiV~~I~~~f~-~~--------------~~~~pw~I~GDFN 194 (271)
T PRK15251 140 ASRPIIGIRI--GN--DVFFSIHALANGGT----DAGAIVRAVHNFFR-PN--------------MRHINWMIAGDFN 194 (271)
T ss_pred cccceEEEEe--cC--eEEEEeeecCCCCc----cHHHHHHHHHHHHh-hc--------------cCCCCEEEeccCC
Confidence 4566777775 33 78999999997321 26666666654321 00 0135689999999
No 29
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=57.88 E-value=88 Score=32.34 Aligned_cols=43 Identities=33% Similarity=0.549 Sum_probs=27.2
Q ss_pred CccceeEEEEEEEeeCCCCCCCCC----CCcccccCCCCCCcEEEEeeEEE
Q 010619 35 VTEIQRLRIYAATWNVGGKTPSNS----LNLEDFLEVECSADIYVCGFQEI 81 (506)
Q Consensus 35 ~~~~~~~rifvgTWNV~g~~p~~~----ldl~~wl~~~~~~DiyviGfQEi 81 (506)
|.+..+++ |+|||..|..-... .++...+.-++++||+ -|||.
T Consensus 19 ~~~~~~~~--~~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIl--a~QEa 65 (271)
T PRK15251 19 FANLEDYK--VATWNLQGSSASTESKWNVNVRQLLSGENPADIL--MVQEA 65 (271)
T ss_pred ccccccce--EEEeecCCCCCCChhhhhhhHHHHhcCCCCCCEE--EEEec
Confidence 44555555 69999999843322 2334445446788975 57995
No 30
>PRK05421 hypothetical protein; Provisional
Probab=48.27 E-value=11 Score=37.80 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=21.6
Q ss_pred EEEEEEeeCCCCCCCCC-CCcccccCCCCCCcEEEEeeEEE
Q 010619 42 RIYAATWNVGGKTPSNS-LNLEDFLEVECSADIYVCGFQEI 81 (506)
Q Consensus 42 rifvgTWNV~g~~p~~~-ldl~~wl~~~~~~DiyviGfQEi 81 (506)
.+-|.||||.+..-.+. .++ .++ ...||| |+|||+
T Consensus 43 ~lri~t~NI~~~~~~~~~~~l-~~l--~~~~Di--I~LQEv 78 (263)
T PRK05421 43 RLRLLVWNIYKQQRAGWLSVL-KNL--GKDADL--VLLQEA 78 (263)
T ss_pred ceeEEEEEccccccccHHHHH-HHh--ccCCCE--EEEEec
Confidence 45688999997653321 122 233 556775 569995
No 31
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=47.47 E-value=7.8 Score=37.73 Aligned_cols=53 Identities=19% Similarity=0.164 Sum_probs=30.1
Q ss_pred eEEEEEeecCCCCCCCcc--HHHHHHHHHHHHHhcCCCcccCCCCCCCCCCcccccccEEEecccccee
Q 010619 291 TSFCFVCCHLASGEKEGD--ELKRNADVAEILKSTQFPKICKGPNPRTAPERIIDHDRVIWLGDLNYRV 357 (506)
Q Consensus 291 ts~cFVn~HLaAg~~~~~--~~rRN~D~~~Il~~~~F~~~~~~~~~~~~~~~i~dhD~vfw~GDLNYRI 357 (506)
..+.++++|++++...+. ...|.+.+..+.+.+. . .+.....+|++||||-..
T Consensus 100 ~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~--~------------~~~~~~~~Il~GDFN~~~ 154 (255)
T TIGR00633 100 DGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYE--K------------ELDAGKPVIICGDMNVAH 154 (255)
T ss_pred CCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHH--H------------HHhcCCcEEEEeecccCC
Confidence 368899999988652211 1234444544443211 0 001235799999999654
No 32
>KOG3870 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.72 E-value=21 Score=38.67 Aligned_cols=17 Identities=47% Similarity=0.751 Sum_probs=14.2
Q ss_pred ccccccEEEecccccee
Q 010619 341 IIDHDRVIWLGDLNYRV 357 (506)
Q Consensus 341 i~dhD~vfw~GDLNYRI 357 (506)
+...+.||+=||||||=
T Consensus 349 L~~S~LvIFKGDLNYRK 365 (434)
T KOG3870|consen 349 LQKSSLVIFKGDLNYRK 365 (434)
T ss_pred HhhCcEEEEeccccHHH
Confidence 34578999999999984
No 33
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=28.28 E-value=77 Score=27.39 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=27.6
Q ss_pred eeEEEEecCCCceeeecCcchHHHHHHHHHHHhCC
Q 010619 77 GFQEIVKLSAGNVLVIEDNEPAAKWLALIHQALNR 111 (506)
Q Consensus 77 GfQEiV~Lna~~vl~~ED~~p~~kW~~lI~~aLN~ 111 (506)
+|+ |+--+..-+|.+++.+-...|.+.|+++|++
T Consensus 69 ~F~-i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~~ 102 (103)
T cd01251 69 GVT-LVTPERKFLFACETEQDRREWIAAFQNVLSR 102 (103)
T ss_pred eEE-EEeCCeEEEEECCCHHHHHHHHHHHHHHhcC
Confidence 787 6655666677888888889999999999985
No 34
>PRK10947 global DNA-binding transcriptional dual regulator H-NS; Provisional
Probab=25.13 E-value=39 Score=31.32 Aligned_cols=24 Identities=29% Similarity=0.499 Sum_probs=16.2
Q ss_pred cCCcccc-cCCC--CCCCCccccCCCCccCcccC
Q 010619 402 FAPTYKY-SHNS--DCYAGETVKSKKKRRTPAWC 432 (506)
Q Consensus 402 F~PTYKy-~~gs--d~Yd~~~~~ss~K~R~PSWc 432 (506)
=||-||| +++. ..|. ..-|.|.|-
T Consensus 93 ~paKYky~dp~G~~~TWT-------GrGR~P~wi 119 (135)
T PRK10947 93 RPAKYSYVDENGETKTWT-------GQGRTPAVI 119 (135)
T ss_pred CCCCCcccCCCCCcCccc-------CCCCCCHHH
Confidence 3789999 5533 3454 357999995
No 35
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.00 E-value=2.2e+02 Score=30.10 Aligned_cols=37 Identities=32% Similarity=0.453 Sum_probs=25.0
Q ss_pred Cccc-CcceeecCCCceeeeeccCCCccCCCcccccEEEE
Q 010619 428 TPAW-CDRILWRGNGIEQLSYIRGESRFSDHRPVCAVFSV 466 (506)
Q Consensus 428 ~PSW-cDRIL~~~~~i~~l~Y~~~e~~~SDHrPV~a~F~v 466 (506)
.+.| =|-|+|++..+ ..=.+.+..-|||+||.+.|+.
T Consensus 270 ~~g~PIDhvf~rgl~~--~ka~rl~~~gSDH~PLLveF~~ 307 (309)
T COG3021 270 AFGLPIDHVFYRGLTV--MKARRLPDRGSDHRPLLVEFSY 307 (309)
T ss_pred ccCCCcceeeecCcch--hhhhhccccCCCCCceEEEEEe
Confidence 3444 68888888332 2222345688999999999975
Done!