BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010623
(506 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X3N|A Chain A, Crystal Structure Of Pqsl, A Probable Fad-Dependent
Monooxygenase From Pseudomonas Aeruginosa
Length = 399
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 119/310 (38%), Gaps = 38/310 (12%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134
LA L + G RV V+E+ E +LL+P G + GL V + + +
Sbjct: 21 LAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEV 80
Query: 135 FKDGNRTQISYPLEKF-HSDVAGRGFHNGRFVQRLREKAASLPNVRLE-QGTVTSLLEEK 192
+ DG L F +S V RG+ F+ E L +++ + TV L E +
Sbjct: 81 YHDGE------LLRYFNYSSVDARGY----FILMPCESLRRLVLEKIDGEATVEMLFETR 130
Query: 193 GTIKGVQYKTKAG------EELTAYAPLTIV-CDGCFSNLRRSLCNPKVD---VPS-CFV 241
I+ VQ + + P +V DG S +RR L + V+ PS V
Sbjct: 131 --IEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLV 188
Query: 242 GL------VLENCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEM 295
G V E L ++ G + FYPI + R +V P ++ +
Sbjct: 189 GTFALAPCVAERNRLYVDSQGGLAY-------FYPIGFDRARLVVSFPREEARELMADTR 241
Query: 296 ANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPL 355
L+ + + E + A K +P + Y ++GDA + HP+
Sbjct: 242 GESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPI 301
Query: 356 TGGGMTVALS 365
TG GM +A+
Sbjct: 302 TGQGMNLAIE 311
>pdb|1PN0|A Chain A, Phenol Hydroxylase From Trichosporon Cutaneum
pdb|1PN0|B Chain B, Phenol Hydroxylase From Trichosporon Cutaneum
pdb|1PN0|C Chain C, Phenol Hydroxylase From Trichosporon Cutaneum
pdb|1PN0|D Chain D, Phenol Hydroxylase From Trichosporon Cutaneum
Length = 665
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 98/274 (35%), Gaps = 37/274 (13%)
Query: 156 GRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215
G NG F L+ + N RL +G +AGE T +
Sbjct: 181 GHKTENGLFRSNLQTQEEEDANYRLPEGK------------------EAGEIETVHCKYV 222
Query: 216 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLE---NCNLP-FENHGHVVLADPSPILFYPI 271
I CDG S +RR+L + + ++ VL+ N P + + A+ I+ P
Sbjct: 223 IGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPR 282
Query: 272 SSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQI----PREIFHSFVAAVDGGNIKTM 327
+N VR V + + G + +T P++ ++IFH + V + T
Sbjct: 283 ENNLVRFYVQLQAR----AEKGGRVD--RTKFTPEVVIANAKKIFHPYTFDVQQLDWFTA 336
Query: 328 PN--RSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPA 385
+ + + + GDA + P G GM ++ D A
Sbjct: 337 YHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTY---NLGWKLGLVLTGRA 393
Query: 386 LCNYLESFYTLRKPVASTINTLAGALYQVFSASP 419
+ L+++ R+P A + ++FS P
Sbjct: 394 KRDILKTYEEERQPFAQALIDFDHQFSRLFSGRP 427
>pdb|4HB9|A Chain A, Crystal Structure Of A Putative Fad Containing
Monooxygenase From Photorhabdus Luminescens Subsp.
Laumondii Tto1 (Target Psi-012791)
Length = 412
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 312 FHSFVAAVDGGNIKTMPNRSMPAA-PYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVI 369
H+ V D NI + RS P P+ + L+GDA + P TG G AL D ++
Sbjct: 282 LHTLVQQSDXENISPLHLRSXPHLLPWKSSTVTLLGDAIHNXTPXTGSGANTALRDALL 340
>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|B Chain B, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|C Chain C, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|D Chain D, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|E Chain E, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|F Chain F, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|G Chain G, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|H Chain H, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
Length = 264
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 25 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 84
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 85 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 142
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 143 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 193
>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|C Chain C, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|D Chain D, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 50 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 109
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 110 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 167
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 168 VSSLAGKV--------AYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 218
>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Sulfone Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 40 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 99
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 100 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 157
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 158 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 208
>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|B Chain B, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|C Chain C, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|D Chain D, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
Length = 272
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 30 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 90 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 147
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 148 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198
>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB6|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 50 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 109
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 110 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 167
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 168 VSSLAGKV--------AYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 218
>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|B Chain B, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|C Chain C, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|D Chain D, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU9|A Chain A, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|B Chain B, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|C Chain C, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|D Chain D, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|3BZU|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3CZR|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3CZR|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3D3E|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D4N|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3FRJ|A Chain A, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3FRJ|B Chain B, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3HFG|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3FCO|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3FCO|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3H6K|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3OQ1|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3QQP|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
Length = 286
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 44 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 104 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 161
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 162 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 212
>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|B Chain B, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|C Chain C, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|D Chain D, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|3BYZ|A Chain A, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|B Chain B, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|C Chain C, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|D Chain D, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3EY4|A Chain A, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|B Chain B, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|C Chain C, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|D Chain D, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
Length = 275
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 33 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 92
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 93 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 150
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 151 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 201
>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
pdb|3PDJ|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
Length = 273
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 31 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 90
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 91 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 148
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 149 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 199
>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|B Chain B, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|C Chain C, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|D Chain D, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
Length = 283
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 47 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 106
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 107 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 164
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 165 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 215
>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|B Chain B, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|D Chain D, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|E Chain E, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3TFQ|A Chain A, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|B Chain B, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|D Chain D, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|E Chain E, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
Length = 286
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 44 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 104 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 161
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 162 VSSLAGKV--------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 212
>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017.
pdb|4HFR|B Chain B, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017
Length = 272
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 75 LANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG-YLKLIELGLEDCV--EQIDAQR--- 128
+A LAK G V V R ++V L+ G I +ED EQ AQ
Sbjct: 30 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89
Query: 129 VFGYALFKDGNRTQISYPLEKFHSDVAG-RGFHNGRFVQRLREKAASLPNVRLEQGTVTS 187
+ G + + T S L FH D+ R F+ + A+LP ++ G++
Sbjct: 90 MGGLDMLILNHITNTSLNL--FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 147
Query: 188 LLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR--SLCNPKVDVPSCFVGLV 244
+ G + A + AY+ DG FS++R+ S+ V + C +GL+
Sbjct: 148 VSSLAGKV--------AYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198
>pdb|3OZ2|A Chain A, Crystal Structure Of A Geranylgeranyl Bacteriochlorophyll
Reductase- Like (Ta0516) From Thermoplasma Acidophilum
At 1.60 A Resolution
Length = 397
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 331 SMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVAL 364
S P PG L+GDA + P+TGGG+ A+
Sbjct: 268 SKVKXPITXPGLXLVGDAARLIDPITGGGIANAI 301
>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein
Length = 201
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 92 DLSEPDRIVGELLQPG---GYLKLIELGLEDCVEQIDAQRVFGY 132
DL++ +R G L P G++ ++L LED E ID Q FGY
Sbjct: 98 DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,201,425
Number of Sequences: 62578
Number of extensions: 577870
Number of successful extensions: 1059
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1055
Number of HSP's gapped (non-prelim): 17
length of query: 506
length of database: 14,973,337
effective HSP length: 103
effective length of query: 403
effective length of database: 8,527,803
effective search space: 3436704609
effective search space used: 3436704609
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)