Query 010623
Match_columns 506
No_of_seqs 419 out of 3126
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:46:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa1_A PGAE, polyketide oxygen 100.0 9.1E-47 3.1E-51 392.2 27.7 393 56-479 7-430 (500)
2 2qa2_A CABE, polyketide oxygen 100.0 1.6E-46 5.4E-51 390.3 26.5 390 59-479 11-431 (499)
3 3ihg_A RDME; flavoenzyme, anth 100.0 6.5E-48 2.2E-52 405.8 16.2 406 59-482 4-458 (535)
4 2r0c_A REBC; flavin adenine di 100.0 1.9E-45 6.3E-50 387.2 19.9 400 59-479 25-482 (549)
5 3rp8_A Flavoprotein monooxygen 100.0 2.3E-43 7.9E-48 358.9 34.4 362 52-432 15-386 (407)
6 1pn0_A Phenol 2-monooxygenase; 100.0 2E-44 6.8E-49 386.0 25.2 392 60-464 8-490 (665)
7 3fmw_A Oxygenase; mithramycin, 100.0 3E-43 1E-47 370.4 26.0 399 59-479 48-482 (570)
8 2dkh_A 3-hydroxybenzoate hydro 100.0 3.9E-43 1.3E-47 375.5 24.7 408 58-477 30-504 (639)
9 2x3n_A Probable FAD-dependent 100.0 1.1E-41 3.7E-46 345.7 25.8 359 60-435 6-377 (399)
10 4hb9_A Similarities with proba 100.0 1.1E-40 3.9E-45 339.2 21.5 341 61-413 2-382 (412)
11 1k0i_A P-hydroxybenzoate hydro 100.0 2.4E-40 8.3E-45 335.2 20.4 375 60-451 2-388 (394)
12 3c96_A Flavin-containing monoo 100.0 1.1E-38 3.9E-43 324.5 28.1 361 59-434 3-395 (410)
13 2vou_A 2,6-dihydroxypyridine h 100.0 9.6E-38 3.3E-42 316.3 29.9 326 60-417 5-370 (397)
14 2xdo_A TETX2 protein; tetracyc 100.0 1.1E-36 3.8E-41 308.6 31.1 337 58-418 24-389 (398)
15 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.7E-37 9.1E-42 311.1 23.5 322 60-408 11-343 (379)
16 3e1t_A Halogenase; flavoprotei 100.0 2.1E-36 7.3E-41 316.0 30.3 352 60-418 7-372 (512)
17 3i3l_A Alkylhalidase CMLS; fla 100.0 9.2E-37 3.1E-41 321.4 26.5 366 52-424 15-392 (591)
18 3oz2_A Digeranylgeranylglycero 100.0 4.1E-36 1.4E-40 303.8 28.9 338 60-415 4-350 (397)
19 3atr_A Conserved archaeal prot 100.0 1.8E-36 6.1E-41 312.1 25.6 341 59-421 5-361 (453)
20 3nix_A Flavoprotein/dehydrogen 100.0 2.3E-34 7.7E-39 293.9 31.5 335 60-404 5-348 (421)
21 3cgv_A Geranylgeranyl reductas 100.0 3.6E-34 1.2E-38 290.0 29.2 341 60-418 4-353 (397)
22 2pyx_A Tryptophan halogenase; 100.0 4.6E-32 1.6E-36 284.2 32.4 333 60-414 7-414 (526)
23 3c4a_A Probable tryptophan hyd 100.0 1.4E-33 4.9E-38 284.0 15.9 316 61-417 1-333 (381)
24 2gmh_A Electron transfer flavo 100.0 2.6E-31 8.7E-36 280.8 28.5 348 58-416 33-426 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 9.3E-30 3.2E-34 266.2 31.6 340 60-427 2-419 (511)
26 2e4g_A Tryptophan halogenase; 100.0 1.2E-29 4.1E-34 267.0 29.7 339 59-424 24-439 (550)
27 2aqj_A Tryptophan halogenase, 100.0 8.3E-30 2.8E-34 267.9 28.1 325 60-414 5-398 (538)
28 3ihm_A Styrene monooxygenase A 99.9 3.5E-27 1.2E-31 240.8 20.5 322 59-411 21-374 (430)
29 2bry_A NEDD9 interacting prote 99.9 3.1E-26 1.1E-30 237.6 13.4 308 58-403 90-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 3.3E-18 1.1E-22 168.5 21.5 291 60-379 2-328 (336)
31 1ryi_A Glycine oxidase; flavop 99.6 7.6E-15 2.6E-19 147.1 17.2 195 157-376 159-361 (382)
32 2gag_B Heterotetrameric sarcos 99.6 1E-13 3.6E-18 139.9 19.5 116 158-282 170-287 (405)
33 2qcu_A Aerobic glycerol-3-phos 99.6 1.4E-13 4.6E-18 143.0 20.7 213 158-377 145-372 (501)
34 3ps9_A TRNA 5-methylaminomethy 99.6 5.8E-15 2E-19 159.0 10.4 68 157-230 412-481 (676)
35 3da1_A Glycerol-3-phosphate de 99.6 1.5E-13 5E-18 144.3 20.5 172 60-232 18-242 (561)
36 1y56_B Sarcosine oxidase; dehy 99.5 6.3E-13 2.2E-17 133.1 23.7 197 158-376 145-354 (382)
37 3dme_A Conserved exported prot 99.5 3.7E-13 1.3E-17 133.9 20.7 72 158-232 146-220 (369)
38 3kkj_A Amine oxidase, flavin-c 99.5 8.6E-13 2.9E-17 125.3 21.2 38 59-96 1-38 (336)
39 3jsk_A Cypbp37 protein; octame 99.5 2.1E-13 7.1E-18 132.2 16.2 141 59-229 78-257 (344)
40 3pvc_A TRNA 5-methylaminomethy 99.5 1.2E-14 4E-19 156.8 7.3 69 157-230 407-477 (689)
41 1qo8_A Flavocytochrome C3 fuma 99.5 1.1E-13 3.8E-18 145.8 14.0 165 58-229 119-318 (566)
42 1rp0_A ARA6, thiazole biosynth 99.5 4.9E-13 1.7E-17 128.2 16.4 140 60-229 39-197 (284)
43 2gf3_A MSOX, monomeric sarcosi 99.5 2E-12 6.9E-17 129.7 21.2 164 60-230 3-213 (389)
44 1y0p_A Fumarate reductase flav 99.5 1.1E-13 3.7E-18 146.1 12.0 165 59-229 125-323 (571)
45 2oln_A NIKD protein; flavoprot 99.5 3.1E-12 1E-16 128.8 21.7 167 59-232 3-218 (397)
46 3nyc_A D-arginine dehydrogenas 99.5 6.5E-13 2.2E-17 132.8 16.6 69 157-232 149-219 (381)
47 4at0_A 3-ketosteroid-delta4-5a 99.4 5.7E-13 2E-17 138.6 12.0 64 163-228 203-269 (510)
48 3v76_A Flavoprotein; structura 99.4 1.4E-12 4.9E-17 131.5 14.2 143 58-223 25-187 (417)
49 2cul_A Glucose-inhibited divis 99.4 3.2E-12 1.1E-16 118.7 14.9 131 60-231 3-133 (232)
50 2gjc_A Thiazole biosynthetic e 99.4 3.5E-12 1.2E-16 122.9 14.4 142 59-230 64-246 (326)
51 2rgh_A Alpha-glycerophosphate 99.4 1.8E-11 6.2E-16 128.7 20.5 72 159-231 185-259 (571)
52 3dje_A Fructosyl amine: oxygen 99.4 6.2E-12 2.1E-16 128.3 15.8 63 157-224 156-222 (438)
53 2i0z_A NAD(FAD)-utilizing dehy 99.3 5.4E-12 1.8E-16 129.0 13.6 153 59-232 25-211 (447)
54 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.6E-11 5.5E-16 128.4 15.7 154 59-230 27-188 (651)
55 3nlc_A Uncharacterized protein 99.3 1.6E-11 5.3E-16 127.5 15.5 149 58-224 105-278 (549)
56 1kf6_A Fumarate reductase flav 99.3 2.1E-11 7.3E-16 128.7 16.5 69 162-230 134-204 (602)
57 2zxi_A TRNA uridine 5-carboxym 99.3 1.8E-11 6E-16 127.6 15.3 153 59-229 26-186 (637)
58 1d4d_A Flavocytochrome C fumar 99.3 7.3E-12 2.5E-16 131.9 12.6 164 59-229 125-323 (572)
59 4dgk_A Phytoene dehydrogenase; 99.3 7.5E-11 2.6E-15 122.4 19.8 64 163-231 222-286 (501)
60 3ka7_A Oxidoreductase; structu 99.3 1.4E-10 4.8E-15 117.7 20.8 58 163-226 197-255 (425)
61 3cp8_A TRNA uridine 5-carboxym 99.3 2.8E-11 9.4E-16 126.6 15.6 154 58-227 19-178 (641)
62 2ywl_A Thioredoxin reductase r 99.3 2.6E-11 8.8E-16 107.8 12.3 117 61-231 2-118 (180)
63 3axb_A Putative oxidoreductase 99.3 4.8E-11 1.7E-15 122.1 15.0 69 158-232 177-264 (448)
64 3c4n_A Uncharacterized protein 99.3 3.1E-11 1.1E-15 121.8 12.7 167 60-233 36-248 (405)
65 2gqf_A Hypothetical protein HI 99.2 9.4E-12 3.2E-16 125.1 8.7 142 59-223 3-168 (401)
66 3nrn_A Uncharacterized protein 99.2 3.5E-10 1.2E-14 114.6 20.4 59 163-230 190-249 (421)
67 1c0p_A D-amino acid oxidase; a 99.2 1.5E-10 5E-15 115.0 16.7 37 58-94 4-40 (363)
68 3i6d_A Protoporphyrinogen oxid 99.2 1.2E-10 4.1E-15 119.7 16.5 62 60-121 5-87 (470)
69 2h88_A Succinate dehydrogenase 99.2 9E-11 3.1E-15 123.9 15.8 63 162-225 155-219 (621)
70 1chu_A Protein (L-aspartate ox 99.2 3.3E-11 1.1E-15 125.8 11.7 65 162-226 138-211 (540)
71 2uzz_A N-methyl-L-tryptophan o 99.2 2.9E-11 1E-15 120.4 10.0 158 60-224 2-205 (372)
72 3fbs_A Oxidoreductase; structu 99.2 1.5E-10 5.1E-15 111.2 14.6 114 60-226 2-115 (297)
73 2wdq_A Succinate dehydrogenase 99.2 1.1E-10 3.7E-15 123.1 14.7 63 162-225 143-208 (588)
74 4fk1_A Putative thioredoxin re 99.2 1.6E-10 5.6E-15 111.7 13.3 114 58-223 4-117 (304)
75 3ab1_A Ferredoxin--NADP reduct 99.2 9.6E-11 3.3E-15 116.2 11.4 126 58-230 12-138 (360)
76 2zbw_A Thioredoxin reductase; 99.2 1.6E-10 5.4E-15 113.3 12.5 124 60-231 5-129 (335)
77 4a9w_A Monooxygenase; baeyer-v 99.1 2.3E-10 8E-15 112.9 12.9 129 60-224 3-133 (357)
78 3gyx_A Adenylylsulfate reducta 99.1 1.7E-10 5.7E-15 122.6 12.5 66 160-225 164-235 (662)
79 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 8.9E-10 3E-14 108.4 16.9 35 61-95 2-39 (342)
80 3itj_A Thioredoxin reductase 1 99.1 1.4E-10 4.7E-15 113.7 10.3 123 57-225 19-144 (338)
81 2bs2_A Quinol-fumarate reducta 99.1 5.3E-10 1.8E-14 118.8 14.2 62 163-225 159-222 (660)
82 2e5v_A L-aspartate oxidase; ar 99.1 2.6E-10 8.7E-15 117.2 11.4 63 161-228 118-181 (472)
83 2q0l_A TRXR, thioredoxin reduc 99.1 7.7E-10 2.6E-14 107.1 13.7 115 61-226 2-117 (311)
84 1jnr_A Adenylylsulfate reducta 99.1 8.9E-11 3.1E-15 125.1 7.5 65 161-225 150-220 (643)
85 1pj5_A N,N-dimethylglycine oxi 99.1 6.4E-10 2.2E-14 122.4 14.2 70 157-232 146-217 (830)
86 3cty_A Thioredoxin reductase; 99.1 8.9E-10 3.1E-14 107.2 13.3 116 57-225 13-128 (319)
87 3f8d_A Thioredoxin reductase ( 99.1 7.3E-10 2.5E-14 107.7 12.5 113 59-224 14-126 (323)
88 2gv8_A Monooxygenase; FMO, FAD 99.1 7.7E-10 2.6E-14 113.0 12.5 158 59-225 5-179 (447)
89 3lov_A Protoporphyrinogen oxid 99.1 1.2E-08 4.1E-13 105.0 21.5 62 60-121 4-82 (475)
90 3g3e_A D-amino-acid oxidase; F 99.1 1.6E-09 5.6E-14 106.9 14.3 33 61-93 1-39 (351)
91 2q7v_A Thioredoxin reductase; 99.0 1E-09 3.6E-14 107.0 11.8 117 59-225 7-125 (325)
92 1w4x_A Phenylacetone monooxyge 99.0 1.5E-09 5.1E-14 113.6 12.0 140 59-225 15-156 (542)
93 2ivd_A PPO, PPOX, protoporphyr 99.0 2.1E-08 7.3E-13 103.2 20.0 63 59-121 15-92 (478)
94 3lzw_A Ferredoxin--NADP reduct 99.0 1.5E-09 5.3E-14 105.9 10.9 117 60-224 7-124 (332)
95 1vdc_A NTR, NADPH dependent th 99.0 8.8E-10 3E-14 107.9 9.1 119 60-225 8-126 (333)
96 2a87_A TRXR, TR, thioredoxin r 99.0 1.9E-09 6.6E-14 105.6 10.5 117 57-225 11-128 (335)
97 4a5l_A Thioredoxin reductase; 99.0 2.2E-09 7.7E-14 104.0 10.7 119 59-223 3-121 (314)
98 3gwf_A Cyclohexanone monooxyge 98.9 1.3E-09 4.5E-14 113.6 9.0 135 60-225 8-149 (540)
99 2xve_A Flavin-containing monoo 98.9 3.9E-09 1.3E-13 108.2 12.4 151 61-226 3-169 (464)
100 3k7m_X 6-hydroxy-L-nicotine ox 98.9 4.1E-09 1.4E-13 107.0 12.2 35 61-95 2-36 (431)
101 1trb_A Thioredoxin reductase; 98.9 2.1E-09 7.2E-14 104.5 9.0 115 59-225 4-118 (320)
102 3s5w_A L-ornithine 5-monooxyge 98.9 8.8E-09 3E-13 105.7 14.1 151 60-225 30-194 (463)
103 1fl2_A Alkyl hydroperoxide red 98.9 3.3E-09 1.1E-13 102.6 10.0 114 60-225 1-117 (310)
104 4ap3_A Steroid monooxygenase; 98.9 2.8E-09 9.7E-14 111.3 9.0 135 59-224 20-160 (549)
105 3d1c_A Flavin-containing putat 98.9 5.5E-09 1.9E-13 103.7 10.5 134 60-224 4-144 (369)
106 1ojt_A Surface protein; redox- 98.9 6.5E-09 2.2E-13 107.2 11.0 38 57-94 3-40 (482)
107 2a8x_A Dihydrolipoyl dehydroge 98.8 4E-09 1.4E-13 108.3 8.5 145 60-227 3-150 (464)
108 1dxl_A Dihydrolipoamide dehydr 98.8 9E-09 3.1E-13 105.8 10.6 146 60-228 6-156 (470)
109 3uox_A Otemo; baeyer-villiger 98.8 7.4E-09 2.5E-13 108.1 9.8 139 59-225 8-149 (545)
110 1v59_A Dihydrolipoamide dehydr 98.8 2.7E-09 9.2E-14 110.0 5.3 145 59-223 4-157 (478)
111 3nks_A Protoporphyrinogen oxid 98.8 1.5E-08 5E-13 104.3 10.8 36 61-96 3-40 (477)
112 3l8k_A Dihydrolipoyl dehydroge 98.8 1.4E-08 4.8E-13 104.2 10.4 134 59-223 3-144 (466)
113 4gcm_A TRXR, thioredoxin reduc 98.8 3.5E-08 1.2E-12 95.5 12.3 34 59-92 5-38 (312)
114 1hyu_A AHPF, alkyl hydroperoxi 98.8 2.1E-08 7E-13 104.3 11.1 114 59-224 211-327 (521)
115 3pl8_A Pyranose 2-oxidase; sub 98.8 4.1E-08 1.4E-12 104.0 13.2 51 177-227 274-328 (623)
116 2bcg_G Secretory pathway GDP d 98.8 1.2E-07 4.2E-12 96.7 16.1 42 57-98 8-49 (453)
117 2vvm_A Monoamine oxidase N; FA 98.7 1.4E-07 4.7E-12 97.6 16.2 61 60-120 39-114 (495)
118 3qfa_A Thioredoxin reductase 1 98.7 1.3E-08 4.4E-13 105.8 8.3 37 57-93 29-65 (519)
119 3urh_A Dihydrolipoyl dehydroge 98.7 1.4E-08 4.6E-13 105.1 8.1 37 58-94 23-59 (491)
120 1zmd_A Dihydrolipoyl dehydroge 98.7 3.5E-08 1.2E-12 101.5 11.2 36 59-94 5-40 (474)
121 3r9u_A Thioredoxin reductase; 98.7 5.4E-08 1.9E-12 94.0 11.9 112 60-223 4-118 (315)
122 3h8l_A NADH oxidase; membrane 98.7 1.8E-08 6.1E-13 101.6 8.5 110 61-224 2-114 (409)
123 1ebd_A E3BD, dihydrolipoamide 98.7 6.4E-08 2.2E-12 99.0 12.4 138 60-226 3-148 (455)
124 1s3e_A Amine oxidase [flavin-c 98.7 1.3E-07 4.3E-12 98.5 14.3 38 59-96 3-40 (520)
125 3dgz_A Thioredoxin reductase 2 98.7 4.1E-08 1.4E-12 101.4 9.8 35 59-93 5-39 (488)
126 2qae_A Lipoamide, dihydrolipoy 98.7 5.8E-08 2E-12 99.7 10.5 35 60-94 2-36 (468)
127 1q1r_A Putidaredoxin reductase 98.7 5.6E-08 1.9E-12 98.6 10.2 36 59-94 3-40 (431)
128 1zk7_A HGII, reductase, mercur 98.7 7.6E-08 2.6E-12 98.8 11.0 34 59-92 3-36 (467)
129 3o0h_A Glutathione reductase; 98.7 6.4E-08 2.2E-12 99.8 10.4 58 163-226 233-291 (484)
130 3sx6_A Sulfide-quinone reducta 98.6 2.3E-08 7.8E-13 101.7 6.2 108 61-226 5-115 (437)
131 3lad_A Dihydrolipoamide dehydr 98.6 1.1E-07 3.7E-12 97.8 11.2 35 60-94 3-37 (476)
132 1xdi_A RV3303C-LPDA; reductase 98.6 1.1E-07 3.7E-12 98.5 10.5 34 60-93 2-38 (499)
133 3p1w_A Rabgdi protein; GDI RAB 98.6 3.3E-07 1.1E-11 93.0 13.7 41 56-96 16-56 (475)
134 3g5s_A Methylenetetrahydrofola 98.6 1.5E-08 5.1E-13 98.6 3.5 115 61-189 2-125 (443)
135 3cgb_A Pyridine nucleotide-dis 98.6 1.1E-07 3.7E-12 97.9 9.6 113 61-224 37-153 (480)
136 1nhp_A NADH peroxidase; oxidor 98.6 6.2E-08 2.1E-12 98.8 7.5 112 61-224 1-116 (447)
137 2hqm_A GR, grase, glutathione 98.6 2.4E-07 8.1E-12 95.4 11.6 35 59-93 10-44 (479)
138 3iwa_A FAD-dependent pyridine 98.6 1.4E-07 4.9E-12 96.8 9.7 36 60-95 3-40 (472)
139 3lxd_A FAD-dependent pyridine 98.6 1.4E-07 4.7E-12 95.3 9.3 36 59-94 8-45 (415)
140 2cdu_A NADPH oxidase; flavoenz 98.5 1.1E-07 3.6E-12 97.2 8.0 34 61-94 1-36 (452)
141 3dgh_A TRXR-1, thioredoxin red 98.5 2.4E-07 8.1E-12 95.5 10.7 34 59-92 8-41 (483)
142 4dna_A Probable glutathione re 98.5 8.7E-07 3E-11 90.7 14.3 57 163-225 212-270 (463)
143 3ics_A Coenzyme A-disulfide re 98.5 3.5E-07 1.2E-11 96.7 11.5 114 59-223 35-152 (588)
144 3oc4_A Oxidoreductase, pyridin 98.5 1.8E-07 6.2E-12 95.5 9.0 34 61-94 3-38 (452)
145 2bc0_A NADH oxidase; flavoprot 98.5 1.1E-07 3.6E-12 98.3 7.0 36 59-94 34-72 (490)
146 4b63_A L-ornithine N5 monooxyg 98.5 1.7E-06 5.7E-11 89.4 14.9 63 159-222 142-213 (501)
147 2yqu_A 2-oxoglutarate dehydrog 98.5 1.7E-07 5.9E-12 95.8 7.4 34 61-94 2-35 (455)
148 3fg2_P Putative rubredoxin red 98.5 3.2E-07 1.1E-11 92.2 9.0 34 61-94 2-37 (404)
149 3q9t_A Choline dehydrogenase a 98.4 1.1E-06 3.7E-11 92.0 12.3 52 173-224 216-271 (577)
150 3fpz_A Thiazole biosynthetic e 98.4 1.9E-07 6.5E-12 91.0 6.2 38 59-96 64-103 (326)
151 3klj_A NAD(FAD)-dependent dehy 98.4 6.3E-07 2.1E-11 89.3 10.1 35 60-94 9-43 (385)
152 3h28_A Sulfide-quinone reducta 98.4 3.5E-07 1.2E-11 92.8 8.3 34 61-94 3-38 (430)
153 3qvp_A Glucose oxidase; oxidor 98.4 1E-06 3.5E-11 92.1 12.0 52 172-223 236-293 (583)
154 3dk9_A Grase, GR, glutathione 98.4 6.8E-07 2.3E-11 91.9 10.2 34 59-92 19-52 (478)
155 2eq6_A Pyruvate dehydrogenase 98.4 1.6E-06 5.5E-11 88.7 12.9 103 60-226 169-274 (464)
156 3kd9_A Coenzyme A disulfide re 98.4 5.9E-07 2E-11 91.6 9.1 35 60-94 3-39 (449)
157 3hyw_A Sulfide-quinone reducta 98.4 3.7E-07 1.3E-11 92.5 7.4 104 62-223 4-109 (430)
158 2x8g_A Thioredoxin glutathione 98.4 1.1E-06 3.8E-11 93.0 11.3 35 58-92 105-139 (598)
159 1fec_A Trypanothione reductase 98.4 1.1E-06 3.9E-11 90.5 10.8 32 60-91 3-35 (490)
160 2v3a_A Rubredoxin reductase; a 98.4 3.1E-06 1.1E-10 84.3 13.7 100 60-225 145-245 (384)
161 4b1b_A TRXR, thioredoxin reduc 98.4 1.3E-06 4.5E-11 90.6 11.0 34 60-93 42-75 (542)
162 3ef6_A Toluene 1,2-dioxygenase 98.4 4.1E-07 1.4E-11 91.6 6.7 34 61-94 3-38 (410)
163 2r9z_A Glutathione amide reduc 98.4 1.5E-06 5.2E-11 88.9 11.1 34 59-92 3-36 (463)
164 1onf_A GR, grase, glutathione 98.3 5.5E-07 1.9E-11 93.1 7.6 34 60-93 2-35 (500)
165 1mo9_A ORF3; nucleotide bindin 98.3 1.2E-06 4E-11 91.1 9.9 38 57-94 40-77 (523)
166 3ntd_A FAD-dependent pyridine 98.3 1.1E-06 3.8E-11 92.3 9.7 35 61-95 2-38 (565)
167 2eq6_A Pyruvate dehydrogenase 98.3 1.9E-06 6.4E-11 88.2 11.1 34 60-93 6-39 (464)
168 2wpf_A Trypanothione reductase 98.3 9.1E-07 3.1E-11 91.3 8.7 35 57-91 4-39 (495)
169 3k30_A Histamine dehydrogenase 98.3 5E-06 1.7E-10 89.4 14.8 38 58-95 389-426 (690)
170 1y56_A Hypothetical protein PH 98.3 7.5E-07 2.5E-11 91.9 7.6 113 59-224 107-220 (493)
171 1ges_A Glutathione reductase; 98.3 1.4E-06 4.9E-11 88.7 9.4 34 59-92 3-36 (450)
172 4gde_A UDP-galactopyranose mut 98.3 3E-07 1E-11 95.4 4.4 39 59-97 9-48 (513)
173 4gut_A Lysine-specific histone 98.3 1.1E-06 3.7E-11 95.1 8.6 39 59-97 335-373 (776)
174 2gqw_A Ferredoxin reductase; f 98.3 2.3E-06 7.9E-11 86.0 9.6 36 59-94 6-43 (408)
175 1lvl_A Dihydrolipoamide dehydr 98.3 4.1E-06 1.4E-10 85.5 11.4 33 60-92 5-37 (458)
176 2yqu_A 2-oxoglutarate dehydrog 98.2 5.4E-06 1.8E-10 84.6 12.1 99 60-225 167-266 (455)
177 1xhc_A NADH oxidase /nitrite r 98.2 1.6E-06 5.5E-11 85.8 7.6 34 60-94 8-41 (367)
178 4g6h_A Rotenone-insensitive NA 98.2 1.5E-06 5.3E-11 89.6 7.6 35 59-93 41-75 (502)
179 2v3a_A Rubredoxin reductase; a 98.2 1.5E-06 5.3E-11 86.6 7.4 35 59-93 3-39 (384)
180 4eqs_A Coenzyme A disulfide re 98.2 1.7E-06 5.9E-11 87.7 7.6 33 62-94 2-36 (437)
181 3vrd_B FCCB subunit, flavocyto 98.2 3.7E-06 1.3E-10 84.3 10.0 104 62-224 4-109 (401)
182 1trb_A Thioredoxin reductase; 98.2 1.2E-05 4E-10 77.7 12.9 100 60-223 145-247 (320)
183 3t37_A Probable dehydrogenase; 98.2 4.5E-06 1.6E-10 86.8 10.6 59 164-223 212-271 (526)
184 2jbv_A Choline oxidase; alcoho 98.2 7.8E-06 2.7E-10 85.3 12.2 57 166-222 212-272 (546)
185 2gag_A Heterotetrameric sarcos 98.2 6.3E-06 2.2E-10 91.7 12.1 36 59-94 127-162 (965)
186 1sez_A Protoporphyrinogen oxid 98.2 2E-06 7E-11 88.9 6.9 63 58-120 11-88 (504)
187 1nhp_A NADH peroxidase; oxidor 98.2 1.5E-05 5E-10 81.1 13.0 100 59-225 148-248 (447)
188 1ebd_A E3BD, dihydrolipoamide 98.1 2.1E-05 7.2E-10 80.2 13.8 102 60-225 170-272 (455)
189 3ab1_A Ferredoxin--NADP reduct 98.1 1.4E-05 4.9E-10 78.6 12.1 99 61-223 164-263 (360)
190 1fl2_A Alkyl hydroperoxide red 98.1 2.6E-05 8.8E-10 74.9 13.5 96 61-223 145-242 (310)
191 2qae_A Lipoamide, dihydrolipoy 98.1 1.8E-05 6.1E-10 81.0 13.0 103 60-225 174-278 (468)
192 2r9z_A Glutathione amide reduc 98.1 1.8E-05 6.1E-10 80.9 12.9 100 60-225 166-266 (463)
193 1gpe_A Protein (glucose oxidas 98.1 1.8E-05 6.1E-10 83.2 12.8 58 167-224 235-298 (587)
194 2q0l_A TRXR, thioredoxin reduc 98.1 4.3E-05 1.5E-09 73.4 14.5 97 60-223 143-241 (311)
195 1m6i_A Programmed cell death p 98.1 5.9E-06 2E-10 85.2 8.8 38 58-95 9-48 (493)
196 1v59_A Dihydrolipoamide dehydr 98.1 2.1E-05 7.3E-10 80.7 12.9 105 60-226 183-290 (478)
197 2jae_A L-amino acid oxidase; o 98.1 3.1E-06 1.1E-10 87.2 6.5 40 58-97 9-48 (489)
198 1ges_A Glutathione reductase; 98.1 1.2E-05 4.2E-10 81.8 10.7 101 60-226 167-268 (450)
199 2b9w_A Putative aminooxidase; 98.1 3.5E-06 1.2E-10 85.0 6.7 38 59-96 5-43 (424)
200 3lxd_A FAD-dependent pyridine 98.1 3.1E-05 1.1E-09 77.8 13.7 101 60-225 152-253 (415)
201 2e1m_A L-glutamate oxidase; L- 98.1 2.9E-06 1E-10 83.6 5.8 37 59-95 43-80 (376)
202 3fg2_P Putative rubredoxin red 98.1 3.1E-05 1E-09 77.6 13.4 101 60-225 142-243 (404)
203 1v0j_A UDP-galactopyranose mut 98.1 2.8E-06 9.6E-11 85.1 5.6 38 58-95 5-43 (399)
204 3itj_A Thioredoxin reductase 1 98.1 2.8E-05 9.4E-10 75.6 12.5 97 60-223 173-271 (338)
205 3fim_B ARYL-alcohol oxidase; A 98.1 5.3E-06 1.8E-10 86.5 7.8 57 167-223 212-276 (566)
206 2yg5_A Putrescine oxidase; oxi 98.1 2.9E-06 9.9E-11 86.5 5.6 38 60-97 5-42 (453)
207 1d5t_A Guanine nucleotide diss 98.1 5.7E-06 1.9E-10 83.8 7.6 40 57-96 3-42 (433)
208 3urh_A Dihydrolipoyl dehydroge 98.0 3.7E-05 1.3E-09 79.1 13.5 103 60-225 198-302 (491)
209 3hdq_A UDP-galactopyranose mut 98.0 4.2E-06 1.4E-10 83.2 5.8 38 58-95 27-64 (397)
210 3ic9_A Dihydrolipoamide dehydr 98.0 4E-05 1.4E-09 78.9 13.3 102 60-225 174-276 (492)
211 3s5w_A L-ornithine 5-monooxyge 98.0 5.4E-05 1.8E-09 77.3 14.0 143 60-223 227-377 (463)
212 1mo9_A ORF3; nucleotide bindin 98.0 4.3E-05 1.5E-09 79.3 13.4 103 61-226 215-319 (523)
213 3r9u_A Thioredoxin reductase; 98.0 4.8E-05 1.7E-09 73.0 12.8 96 60-222 147-243 (315)
214 1rsg_A FMS1 protein; FAD bindi 98.0 3.2E-06 1.1E-10 87.8 4.4 38 60-97 8-46 (516)
215 1dxl_A Dihydrolipoamide dehydr 98.0 2.2E-05 7.6E-10 80.4 10.5 103 60-225 177-281 (470)
216 1lvl_A Dihydrolipoamide dehydr 98.0 1.7E-05 5.9E-10 80.9 8.9 99 60-225 171-270 (458)
217 3cty_A Thioredoxin reductase; 97.9 3.9E-05 1.3E-09 74.0 11.0 95 61-223 156-252 (319)
218 1zmd_A Dihydrolipoyl dehydroge 97.9 5.9E-05 2E-09 77.3 12.7 103 60-225 178-284 (474)
219 1q1r_A Putidaredoxin reductase 97.9 5.7E-05 2E-09 76.3 12.1 101 60-225 149-252 (431)
220 1vdc_A NTR, NADPH dependent th 97.9 6.8E-05 2.3E-09 72.7 12.2 97 60-223 159-259 (333)
221 2q7v_A Thioredoxin reductase; 97.9 0.0001 3.6E-09 71.2 13.4 95 61-223 153-249 (325)
222 2a8x_A Dihydrolipoyl dehydroge 97.9 5.1E-05 1.7E-09 77.5 11.6 102 60-225 171-273 (464)
223 2hqm_A GR, grase, glutathione 97.9 5.6E-05 1.9E-09 77.5 11.7 101 60-225 185-287 (479)
224 3lad_A Dihydrolipoamide dehydr 97.9 0.0001 3.5E-09 75.5 13.6 102 60-225 180-282 (476)
225 1fec_A Trypanothione reductase 97.9 7.3E-05 2.5E-09 76.9 12.4 100 60-225 187-290 (490)
226 1i8t_A UDP-galactopyranose mut 97.9 7E-06 2.4E-10 81.2 4.5 36 61-96 2-37 (367)
227 2zbw_A Thioredoxin reductase; 97.9 7.8E-05 2.7E-09 72.4 11.8 99 60-223 152-252 (335)
228 2cdu_A NADPH oxidase; flavoenz 97.9 8.6E-05 2.9E-09 75.5 12.5 100 60-225 149-249 (452)
229 1onf_A GR, grase, glutathione 97.9 8.2E-05 2.8E-09 76.7 12.4 101 60-225 176-277 (500)
230 3ef6_A Toluene 1,2-dioxygenase 97.9 4.6E-05 1.6E-09 76.5 9.9 100 60-225 143-243 (410)
231 2bi7_A UDP-galactopyranose mut 97.8 1.2E-05 4.2E-10 79.9 5.5 37 60-96 3-39 (384)
232 3oc4_A Oxidoreductase, pyridin 97.8 0.00017 5.9E-09 73.3 14.1 99 60-225 147-246 (452)
233 1ojt_A Surface protein; redox- 97.8 7.6E-05 2.6E-09 76.6 11.2 101 60-225 185-288 (482)
234 2iid_A L-amino-acid oxidase; f 97.8 1.2E-05 4.2E-10 82.9 5.3 38 60-97 33-70 (498)
235 2vdc_G Glutamate synthase [NAD 97.8 1.8E-05 6E-10 80.6 6.1 36 59-94 121-156 (456)
236 3ic9_A Dihydrolipoamide dehydr 97.8 1E-05 3.5E-10 83.3 4.4 34 60-93 8-41 (492)
237 2gqw_A Ferredoxin reductase; f 97.8 0.00014 4.9E-09 72.8 12.7 96 60-225 145-241 (408)
238 1xdi_A RV3303C-LPDA; reductase 97.8 0.0001 3.5E-09 76.0 12.0 99 60-225 182-281 (499)
239 2bc0_A NADH oxidase; flavoprot 97.8 0.00011 3.8E-09 75.5 12.1 99 60-225 194-293 (490)
240 4dsg_A UDP-galactopyranose mut 97.8 1.8E-05 6.2E-10 81.2 6.1 38 59-96 8-46 (484)
241 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00018 6.1E-09 74.6 13.4 95 61-222 356-452 (521)
242 3iwa_A FAD-dependent pyridine 97.8 0.0001 3.5E-09 75.5 11.4 100 60-225 159-260 (472)
243 3dgz_A Thioredoxin reductase 2 97.8 0.00023 7.8E-09 73.2 14.0 103 60-225 185-289 (488)
244 3ntd_A FAD-dependent pyridine 97.7 0.0002 6.8E-09 75.0 13.2 98 61-225 152-269 (565)
245 1zk7_A HGII, reductase, mercur 97.7 0.00019 6.4E-09 73.4 12.3 98 60-226 176-274 (467)
246 3dgh_A TRXR-1, thioredoxin red 97.7 0.00022 7.6E-09 73.1 12.9 103 60-225 187-291 (483)
247 2wpf_A Trypanothione reductase 97.7 0.00017 5.7E-09 74.3 12.0 100 60-225 191-294 (495)
248 3f8d_A Thioredoxin reductase ( 97.7 0.0003 1E-08 67.5 13.1 96 60-223 154-251 (323)
249 1xhc_A NADH oxidase /nitrite r 97.7 0.00015 5.2E-09 71.5 10.9 92 61-225 144-236 (367)
250 3cgb_A Pyridine nucleotide-dis 97.7 0.00013 4.5E-09 74.8 10.7 99 59-225 185-284 (480)
251 1m6i_A Programmed cell death p 97.7 0.00031 1.1E-08 72.2 12.9 99 61-225 181-284 (493)
252 3dk9_A Grase, GR, glutathione 97.7 0.00039 1.3E-08 71.2 13.4 103 60-225 187-295 (478)
253 4b1b_A TRXR, thioredoxin reduc 97.7 0.00039 1.3E-08 72.0 13.4 99 59-225 222-321 (542)
254 1b37_A Protein (polyamine oxid 97.6 3.7E-05 1.3E-09 78.7 5.4 38 59-96 3-41 (472)
255 3qfa_A Thioredoxin reductase 1 97.6 0.00058 2E-08 70.6 14.0 103 60-225 210-317 (519)
256 2x8g_A Thioredoxin glutathione 97.6 0.00066 2.3E-08 71.6 14.7 101 61-225 287-397 (598)
257 1kdg_A CDH, cellobiose dehydro 97.6 4.3E-05 1.5E-09 79.8 5.0 59 166-224 199-262 (546)
258 1o94_A Tmadh, trimethylamine d 97.6 5.2E-05 1.8E-09 81.9 5.8 36 59-94 388-423 (729)
259 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00043 1.5E-08 70.6 11.9 102 60-226 172-275 (466)
260 2a87_A TRXR, TR, thioredoxin r 97.5 0.00025 8.4E-09 68.9 9.5 96 60-223 155-252 (335)
261 1ps9_A 2,4-dienoyl-COA reducta 97.5 8E-05 2.7E-09 79.7 6.0 36 59-94 372-407 (671)
262 2z3y_A Lysine-specific histone 97.5 7.8E-05 2.7E-09 79.6 5.7 38 59-96 106-143 (662)
263 3d1c_A Flavin-containing putat 97.5 0.0009 3.1E-08 65.7 13.1 105 61-223 167-272 (369)
264 2xag_A Lysine-specific histone 97.5 9.1E-05 3.1E-09 80.7 6.2 38 59-96 277-314 (852)
265 3ics_A Coenzyme A-disulfide re 97.5 0.00052 1.8E-08 72.2 11.4 97 60-225 187-284 (588)
266 1lqt_A FPRA; NADP+ derivative, 97.4 7.1E-05 2.4E-09 76.1 4.3 35 60-94 3-44 (456)
267 1ju2_A HydroxynitrIle lyase; f 97.4 4.4E-05 1.5E-09 79.4 2.5 49 175-223 206-261 (536)
268 1cjc_A Protein (adrenodoxin re 97.4 0.0013 4.4E-08 66.9 13.1 34 60-93 145-199 (460)
269 3lzw_A Ferredoxin--NADP reduct 97.3 0.0007 2.4E-08 65.3 9.8 95 60-223 154-250 (332)
270 3gwf_A Cyclohexanone monooxyge 97.3 0.0011 3.7E-08 68.9 11.5 35 60-94 178-212 (540)
271 1cjc_A Protein (adrenodoxin re 97.3 0.00014 4.8E-09 74.0 4.7 35 60-94 6-42 (460)
272 1gte_A Dihydropyrimidine dehyd 97.3 0.00016 5.6E-09 80.9 5.7 35 60-94 187-222 (1025)
273 4a5l_A Thioredoxin reductase; 97.3 0.0016 5.6E-08 62.2 11.6 34 60-93 152-185 (314)
274 3kd9_A Coenzyme A disulfide re 97.3 0.0013 4.4E-08 66.7 11.1 96 61-224 149-245 (449)
275 1lqt_A FPRA; NADP+ derivative, 97.2 0.0011 3.9E-08 67.2 10.5 59 164-223 248-326 (456)
276 1n4w_A CHOD, cholesterol oxida 97.2 0.00021 7.1E-09 73.7 4.8 58 167-224 226-289 (504)
277 1coy_A Cholesterol oxidase; ox 97.2 0.00025 8.7E-09 73.1 5.4 59 166-224 230-294 (507)
278 4eqs_A Coenzyme A disulfide re 97.2 0.0012 4.2E-08 66.6 9.9 34 61-94 148-181 (437)
279 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00019 6.7E-09 76.1 3.8 36 60-95 56-100 (721)
280 4g6h_A Rotenone-insensitive NA 97.1 0.0018 6.1E-08 66.6 10.3 97 61-222 218-331 (502)
281 3uox_A Otemo; baeyer-villiger 97.0 0.0017 6E-08 67.4 9.2 35 60-94 185-219 (545)
282 1vg0_A RAB proteins geranylger 97.0 0.0011 3.7E-08 69.5 7.4 41 57-97 5-45 (650)
283 2gag_A Heterotetrameric sarcos 97.0 0.0015 5E-08 72.7 8.6 94 61-225 285-385 (965)
284 3fbs_A Oxidoreductase; structu 97.0 0.0012 4.2E-08 62.4 7.1 33 60-93 141-173 (297)
285 4gcm_A TRXR, thioredoxin reduc 96.9 0.012 4E-07 56.2 13.7 34 61-94 146-179 (312)
286 1gte_A Dihydropyrimidine dehyd 96.8 0.0054 1.8E-07 68.7 12.0 33 61-93 333-366 (1025)
287 2vdc_G Glutamate synthase [NAD 96.8 0.002 6.9E-08 65.3 7.5 35 60-94 264-299 (456)
288 4ap3_A Steroid monooxygenase; 96.8 0.0014 4.8E-08 68.1 6.1 35 60-94 191-225 (549)
289 2gv8_A Monooxygenase; FMO, FAD 96.7 0.0041 1.4E-07 62.9 9.2 34 60-93 212-246 (447)
290 2xve_A Flavin-containing monoo 96.5 0.0089 3.1E-07 60.7 10.2 35 60-94 197-231 (464)
291 3klj_A NAD(FAD)-dependent dehy 96.5 0.0023 7.8E-08 63.4 5.4 36 61-96 147-182 (385)
292 3fwz_A Inner membrane protein 96.3 0.005 1.7E-07 51.3 5.7 34 60-93 7-40 (140)
293 1ps9_A 2,4-dienoyl-COA reducta 96.3 0.012 4.3E-07 62.7 9.9 51 166-223 577-628 (671)
294 2g1u_A Hypothetical protein TM 96.2 0.0047 1.6E-07 52.4 5.1 35 60-94 19-53 (155)
295 1id1_A Putative potassium chan 95.9 0.011 3.7E-07 50.0 5.8 34 60-93 3-36 (153)
296 1lss_A TRK system potassium up 95.9 0.0089 3E-07 49.4 5.0 33 61-93 5-37 (140)
297 1o94_A Tmadh, trimethylamine d 95.8 0.019 6.7E-07 61.7 8.9 34 60-93 528-563 (729)
298 3llv_A Exopolyphosphatase-rela 95.7 0.011 3.9E-07 49.0 5.1 33 61-93 7-39 (141)
299 3ic5_A Putative saccharopine d 95.4 0.015 5.2E-07 46.2 4.7 33 61-93 6-39 (118)
300 3sx6_A Sulfide-quinone reducta 95.4 0.099 3.4E-06 52.4 11.6 52 167-222 213-268 (437)
301 3h28_A Sulfide-quinone reducta 95.3 0.052 1.8E-06 54.4 9.3 52 166-223 204-256 (430)
302 4a9w_A Monooxygenase; baeyer-v 95.2 0.023 7.9E-07 54.9 6.0 33 60-93 163-195 (357)
303 3c85_A Putative glutathione-re 95.0 0.026 8.9E-07 49.2 5.3 34 60-93 39-73 (183)
304 2hmt_A YUAA protein; RCK, KTN, 95.0 0.023 7.8E-07 47.0 4.6 33 61-93 7-39 (144)
305 3k6j_A Protein F01G10.3, confi 94.9 0.057 1.9E-06 54.2 8.1 34 61-94 55-88 (460)
306 4fk1_A Putative thioredoxin re 94.9 0.047 1.6E-06 51.8 7.1 33 61-93 147-180 (304)
307 3l4b_C TRKA K+ channel protien 94.7 0.021 7.2E-07 51.4 4.0 32 62-93 2-33 (218)
308 1w4x_A Phenylacetone monooxyge 94.3 0.048 1.7E-06 56.5 6.1 35 60-94 186-220 (542)
309 3i83_A 2-dehydropantoate 2-red 94.3 0.04 1.4E-06 52.9 5.0 32 61-92 3-34 (320)
310 2ewd_A Lactate dehydrogenase,; 94.2 0.045 1.5E-06 52.4 5.1 35 59-93 3-38 (317)
311 3ado_A Lambda-crystallin; L-gu 94.1 0.036 1.2E-06 52.8 4.2 33 61-93 7-39 (319)
312 4e12_A Diketoreductase; oxidor 94.1 0.054 1.9E-06 50.9 5.4 33 61-93 5-37 (283)
313 4dio_A NAD(P) transhydrogenase 94.0 0.054 1.9E-06 53.2 5.4 34 60-93 190-223 (405)
314 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.059 2E-06 51.1 5.5 32 62-93 17-48 (302)
315 3hn2_A 2-dehydropantoate 2-red 93.8 0.048 1.6E-06 52.1 4.6 32 61-92 3-34 (312)
316 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.06 2E-06 48.4 4.7 33 60-92 31-63 (223)
317 2x5o_A UDP-N-acetylmuramoylala 93.7 0.042 1.4E-06 55.2 4.2 35 61-95 6-40 (439)
318 4g65_A TRK system potassium up 93.5 0.027 9.4E-07 56.9 2.2 35 60-94 3-37 (461)
319 1ks9_A KPA reductase;, 2-dehyd 93.4 0.075 2.6E-06 49.9 5.2 33 62-94 2-34 (291)
320 1pzg_A LDH, lactate dehydrogen 93.4 0.071 2.4E-06 51.3 5.0 33 61-93 10-43 (331)
321 3lk7_A UDP-N-acetylmuramoylala 93.4 0.058 2E-06 54.4 4.6 33 61-93 10-42 (451)
322 2y0c_A BCEC, UDP-glucose dehyd 93.4 0.067 2.3E-06 54.3 5.0 34 60-93 8-41 (478)
323 1kyq_A Met8P, siroheme biosynt 93.4 0.041 1.4E-06 51.1 3.1 34 60-93 13-46 (274)
324 3qha_A Putative oxidoreductase 93.4 0.058 2E-06 51.1 4.2 36 59-94 14-49 (296)
325 2raf_A Putative dinucleotide-b 93.4 0.086 3E-06 47.0 5.2 35 60-94 19-53 (209)
326 1t2d_A LDH-P, L-lactate dehydr 93.3 0.089 3.1E-06 50.4 5.5 34 60-93 4-38 (322)
327 3l9w_A Glutathione-regulated p 93.3 0.069 2.4E-06 53.1 4.8 35 60-94 4-38 (413)
328 3g17_A Similar to 2-dehydropan 93.2 0.063 2.1E-06 50.7 4.3 33 61-93 3-35 (294)
329 3gg2_A Sugar dehydrogenase, UD 93.2 0.075 2.6E-06 53.5 5.0 33 61-93 3-35 (450)
330 3p2y_A Alanine dehydrogenase/p 93.2 0.065 2.2E-06 52.2 4.3 34 60-93 184-217 (381)
331 4b63_A L-ornithine N5 monooxyg 93.2 0.16 5.4E-06 52.0 7.5 34 61-94 247-282 (501)
332 2hjr_A Malate dehydrogenase; m 93.2 0.092 3.1E-06 50.4 5.4 33 61-93 15-48 (328)
333 1bg6_A N-(1-D-carboxylethyl)-L 93.2 0.079 2.7E-06 51.5 5.0 34 60-93 4-37 (359)
334 1lld_A L-lactate dehydrogenase 93.2 0.082 2.8E-06 50.5 5.0 33 61-93 8-42 (319)
335 3h8l_A NADH oxidase; membrane 93.1 0.27 9.1E-06 48.7 8.9 48 166-223 222-270 (409)
336 3ghy_A Ketopantoate reductase 93.1 0.092 3.1E-06 50.6 5.3 32 61-92 4-35 (335)
337 4a7p_A UDP-glucose dehydrogena 93.1 0.089 3E-06 52.7 5.2 35 60-94 8-42 (446)
338 1jw9_B Molybdopterin biosynthe 93.0 0.072 2.4E-06 49.0 4.2 33 61-93 32-65 (249)
339 2ew2_A 2-dehydropantoate 2-red 92.8 0.096 3.3E-06 49.7 4.9 33 61-93 4-36 (316)
340 2dpo_A L-gulonate 3-dehydrogen 92.7 0.097 3.3E-06 50.0 4.8 33 61-93 7-39 (319)
341 3doj_A AT3G25530, dehydrogenas 92.7 0.11 3.8E-06 49.4 5.1 33 61-93 22-54 (310)
342 4dna_A Probable glutathione re 92.6 0.13 4.5E-06 52.0 5.9 35 60-94 170-204 (463)
343 3g79_A NDP-N-acetyl-D-galactos 92.4 0.12 3.9E-06 52.3 5.0 34 61-94 19-54 (478)
344 4e21_A 6-phosphogluconate dehy 92.4 0.12 4.1E-06 50.2 5.0 37 57-93 19-55 (358)
345 1pjc_A Protein (L-alanine dehy 92.4 0.12 4E-06 50.5 4.9 33 61-93 168-200 (361)
346 3eag_A UDP-N-acetylmuramate:L- 92.3 0.13 4.4E-06 49.4 5.1 34 61-94 5-39 (326)
347 1l7d_A Nicotinamide nucleotide 92.3 0.14 4.8E-06 50.4 5.4 34 60-93 172-205 (384)
348 1x13_A NAD(P) transhydrogenase 92.3 0.12 4.2E-06 51.1 5.0 34 60-93 172-205 (401)
349 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.051 1.7E-06 45.2 1.9 33 61-93 22-54 (144)
350 3ego_A Probable 2-dehydropanto 92.2 0.12 4.2E-06 49.0 4.8 33 60-93 2-34 (307)
351 3pid_A UDP-glucose 6-dehydroge 92.2 0.12 4.1E-06 51.4 4.8 33 60-93 36-68 (432)
352 1z82_A Glycerol-3-phosphate de 92.2 0.13 4.5E-06 49.5 5.0 35 59-93 13-47 (335)
353 3k96_A Glycerol-3-phosphate de 92.1 0.15 5.2E-06 49.5 5.3 34 60-93 29-62 (356)
354 3o0h_A Glutathione reductase; 91.9 0.18 6E-06 51.3 5.9 35 60-94 191-225 (484)
355 2v6b_A L-LDH, L-lactate dehydr 91.9 0.15 5E-06 48.5 4.9 32 62-93 2-35 (304)
356 3vtf_A UDP-glucose 6-dehydroge 91.9 0.17 5.7E-06 50.4 5.4 34 60-93 21-54 (444)
357 2a9f_A Putative malic enzyme ( 91.7 0.15 5.1E-06 49.6 4.7 33 60-92 188-221 (398)
358 3pef_A 6-phosphogluconate dehy 91.7 0.14 5E-06 48.0 4.6 33 61-93 2-34 (287)
359 1ur5_A Malate dehydrogenase; o 91.7 0.18 6.1E-06 47.9 5.2 33 61-93 3-36 (309)
360 3dtt_A NADP oxidoreductase; st 91.6 0.19 6.4E-06 46.0 5.1 34 60-93 19-52 (245)
361 1guz_A Malate dehydrogenase; o 91.4 0.19 6.4E-06 47.8 5.1 32 62-93 2-35 (310)
362 1mv8_A GMD, GDP-mannose 6-dehy 91.4 0.14 4.8E-06 51.3 4.3 32 62-93 2-33 (436)
363 3hwr_A 2-dehydropantoate 2-red 91.4 0.17 6E-06 48.3 4.8 32 60-92 19-50 (318)
364 3tl2_A Malate dehydrogenase; c 91.3 0.21 7.1E-06 47.5 5.3 32 61-92 9-41 (315)
365 2eez_A Alanine dehydrogenase; 91.3 0.18 6E-06 49.3 4.9 33 61-93 167-199 (369)
366 3g0o_A 3-hydroxyisobutyrate de 91.3 0.19 6.5E-06 47.6 5.0 34 60-93 7-40 (303)
367 3h8v_A Ubiquitin-like modifier 91.3 0.14 5E-06 47.9 4.0 34 60-93 36-70 (292)
368 2uyy_A N-PAC protein; long-cha 91.3 0.23 8E-06 47.2 5.7 34 60-93 30-63 (316)
369 1zcj_A Peroxisomal bifunctiona 91.3 0.2 6.9E-06 50.5 5.4 33 61-93 38-70 (463)
370 1zej_A HBD-9, 3-hydroxyacyl-CO 91.2 0.19 6.6E-06 47.2 4.8 33 60-93 12-44 (293)
371 3gvi_A Malate dehydrogenase; N 91.1 0.23 7.9E-06 47.4 5.4 34 60-93 7-41 (324)
372 1y6j_A L-lactate dehydrogenase 91.1 0.22 7.5E-06 47.5 5.2 34 60-93 7-42 (318)
373 3rui_A Ubiquitin-like modifier 91.1 0.21 7.1E-06 47.8 5.0 34 60-93 34-68 (340)
374 2vns_A Metalloreductase steap3 91.1 0.25 8.5E-06 44.2 5.3 34 60-93 28-61 (215)
375 4ffl_A PYLC; amino acid, biosy 91.0 0.24 8.3E-06 48.1 5.6 35 62-96 3-37 (363)
376 3l6d_A Putative oxidoreductase 90.9 0.31 1.1E-05 46.2 6.0 34 60-93 9-42 (306)
377 2aef_A Calcium-gated potassium 90.9 0.082 2.8E-06 48.0 1.9 33 60-93 9-41 (234)
378 3phh_A Shikimate dehydrogenase 90.8 0.25 8.4E-06 45.8 5.1 34 60-93 118-151 (269)
379 4gx0_A TRKA domain protein; me 90.8 0.6 2.1E-05 48.4 8.7 35 60-94 127-161 (565)
380 1evy_A Glycerol-3-phosphate de 90.8 0.15 5E-06 49.8 3.7 32 62-93 17-48 (366)
381 2vhw_A Alanine dehydrogenase; 90.7 0.22 7.4E-06 48.8 4.9 34 60-93 168-201 (377)
382 3k30_A Histamine dehydrogenase 90.7 0.23 7.8E-06 53.0 5.4 35 60-94 523-559 (690)
383 1vl6_A Malate oxidoreductase; 90.7 0.22 7.4E-06 48.4 4.7 33 60-92 192-225 (388)
384 1vpd_A Tartronate semialdehyde 90.7 0.19 6.6E-06 47.3 4.3 33 61-93 6-38 (299)
385 3cky_A 2-hydroxymethyl glutara 90.6 0.21 7.2E-06 47.1 4.5 34 60-93 4-37 (301)
386 1nyt_A Shikimate 5-dehydrogena 90.5 0.25 8.7E-06 45.9 4.9 32 61-92 120-151 (271)
387 1zud_1 Adenylyltransferase THI 90.5 0.22 7.7E-06 45.7 4.5 34 60-93 28-62 (251)
388 1txg_A Glycerol-3-phosphate de 90.5 0.19 6.4E-06 48.3 4.1 30 62-91 2-31 (335)
389 2p4q_A 6-phosphogluconate dehy 90.5 0.28 9.4E-06 50.0 5.5 35 59-93 9-43 (497)
390 4ezb_A Uncharacterized conserv 90.5 0.22 7.4E-06 47.6 4.5 34 60-93 24-58 (317)
391 4dll_A 2-hydroxy-3-oxopropiona 90.4 0.24 8.2E-06 47.3 4.8 34 60-93 31-64 (320)
392 3p7m_A Malate dehydrogenase; p 90.4 0.31 1.1E-05 46.5 5.5 33 61-93 6-39 (321)
393 3ond_A Adenosylhomocysteinase; 90.3 0.21 7.1E-06 50.2 4.3 34 60-93 265-298 (488)
394 3pqe_A L-LDH, L-lactate dehydr 90.3 0.26 8.8E-06 47.2 4.8 33 60-92 5-39 (326)
395 3pdu_A 3-hydroxyisobutyrate de 90.2 0.17 5.9E-06 47.4 3.5 32 62-93 3-34 (287)
396 2q3e_A UDP-glucose 6-dehydroge 90.2 0.2 7E-06 50.6 4.3 33 61-93 6-40 (467)
397 3mog_A Probable 3-hydroxybutyr 90.1 0.27 9.1E-06 49.9 5.0 33 61-93 6-38 (483)
398 3e8x_A Putative NAD-dependent 90.0 0.28 9.7E-06 44.2 4.7 34 60-93 21-55 (236)
399 4gx0_A TRKA domain protein; me 90.0 0.3 1E-05 50.7 5.5 57 61-118 349-407 (565)
400 3hyw_A Sulfide-quinone reducta 90.0 1.6 5.4E-05 43.4 10.6 53 165-223 203-256 (430)
401 4huj_A Uncharacterized protein 89.9 0.15 5.3E-06 45.7 2.8 33 61-93 24-57 (220)
402 1jay_A Coenzyme F420H2:NADP+ o 89.9 0.31 1.1E-05 43.2 4.8 32 62-93 2-34 (212)
403 2izz_A Pyrroline-5-carboxylate 89.8 0.33 1.1E-05 46.4 5.2 34 60-93 22-59 (322)
404 3orq_A N5-carboxyaminoimidazol 89.8 0.64 2.2E-05 45.4 7.4 36 60-95 12-47 (377)
405 1dlj_A UDP-glucose dehydrogena 89.7 0.22 7.5E-06 49.3 4.0 31 62-93 2-32 (402)
406 1pjq_A CYSG, siroheme synthase 89.7 0.27 9.2E-06 49.5 4.7 32 61-92 13-44 (457)
407 2pv7_A T-protein [includes: ch 89.7 0.44 1.5E-05 45.0 5.9 33 61-93 22-55 (298)
408 1n4w_A CHOD, cholesterol oxida 89.6 0.29 1E-05 50.0 5.0 35 59-93 4-38 (504)
409 2egg_A AROE, shikimate 5-dehyd 89.6 0.29 1E-05 46.2 4.6 33 61-93 142-175 (297)
410 1a5z_A L-lactate dehydrogenase 89.6 0.27 9.1E-06 47.0 4.3 32 62-93 2-35 (319)
411 3h5n_A MCCB protein; ubiquitin 89.6 0.28 9.7E-06 47.5 4.5 34 60-93 118-152 (353)
412 2f1k_A Prephenate dehydrogenas 89.6 0.33 1.1E-05 45.2 4.9 32 62-93 2-33 (279)
413 1oju_A MDH, malate dehydrogena 89.5 0.28 9.4E-06 46.2 4.3 32 62-93 2-35 (294)
414 3ldh_A Lactate dehydrogenase; 89.5 0.4 1.4E-05 45.8 5.4 33 60-92 21-55 (330)
415 2rcy_A Pyrroline carboxylate r 89.5 0.35 1.2E-05 44.5 5.0 34 61-94 5-42 (262)
416 2zyd_A 6-phosphogluconate dehy 89.4 0.33 1.1E-05 49.2 5.0 35 59-93 14-48 (480)
417 3dfu_A Uncharacterized protein 89.3 0.11 3.9E-06 46.8 1.4 32 60-91 6-37 (232)
418 4gwg_A 6-phosphogluconate dehy 89.2 0.4 1.4E-05 48.4 5.5 33 61-93 5-37 (484)
419 2qyt_A 2-dehydropantoate 2-red 89.1 0.24 8.1E-06 47.1 3.6 31 61-91 9-45 (317)
420 3ggo_A Prephenate dehydrogenas 89.1 0.41 1.4E-05 45.5 5.2 33 61-93 34-68 (314)
421 2h78_A Hibadh, 3-hydroxyisobut 89.1 0.31 1.1E-05 46.0 4.4 33 61-93 4-36 (302)
422 1ez4_A Lactate dehydrogenase; 89.0 0.34 1.2E-05 46.1 4.6 35 58-92 3-39 (318)
423 3nep_X Malate dehydrogenase; h 88.9 0.35 1.2E-05 45.9 4.6 32 62-93 2-35 (314)
424 3don_A Shikimate dehydrogenase 88.9 0.29 9.8E-06 45.6 3.9 33 61-93 118-151 (277)
425 3u62_A Shikimate dehydrogenase 88.9 0.5 1.7E-05 43.4 5.4 32 62-93 110-142 (253)
426 2pgd_A 6-phosphogluconate dehy 88.9 0.41 1.4E-05 48.6 5.3 33 61-93 3-35 (482)
427 2gf2_A Hibadh, 3-hydroxyisobut 88.8 0.37 1.3E-05 45.2 4.7 32 62-93 2-33 (296)
428 3ktd_A Prephenate dehydrogenas 88.8 0.5 1.7E-05 45.5 5.6 33 61-93 9-41 (341)
429 4gsl_A Ubiquitin-like modifier 88.8 0.39 1.3E-05 49.5 5.0 34 60-93 326-360 (615)
430 3gvp_A Adenosylhomocysteinase 88.7 0.33 1.1E-05 47.8 4.3 34 60-93 220-253 (435)
431 2i6t_A Ubiquitin-conjugating e 88.6 0.36 1.2E-05 45.7 4.4 33 61-93 15-49 (303)
432 1p77_A Shikimate 5-dehydrogena 88.6 0.31 1E-05 45.4 3.9 33 61-93 120-152 (272)
433 3vku_A L-LDH, L-lactate dehydr 88.6 0.4 1.4E-05 45.8 4.7 33 60-92 9-43 (326)
434 1yqg_A Pyrroline-5-carboxylate 88.6 0.36 1.2E-05 44.5 4.3 32 62-93 2-34 (263)
435 2we8_A Xanthine dehydrogenase; 88.5 0.48 1.6E-05 46.4 5.3 36 59-94 203-238 (386)
436 3gpi_A NAD-dependent epimerase 88.5 0.57 1.9E-05 43.6 5.7 34 61-94 4-37 (286)
437 3ce6_A Adenosylhomocysteinase; 88.5 0.34 1.2E-05 49.1 4.3 34 60-93 274-307 (494)
438 3tri_A Pyrroline-5-carboxylate 88.5 0.55 1.9E-05 43.8 5.6 33 61-93 4-39 (280)
439 3d0o_A L-LDH 1, L-lactate dehy 88.4 0.4 1.4E-05 45.7 4.7 33 60-92 6-40 (317)
440 3tnl_A Shikimate dehydrogenase 88.4 0.45 1.5E-05 45.2 4.9 34 60-93 154-188 (315)
441 3d4o_A Dipicolinate synthase s 88.4 0.45 1.5E-05 44.8 4.9 33 61-93 156-188 (293)
442 3gt0_A Pyrroline-5-carboxylate 88.4 0.55 1.9E-05 42.8 5.4 33 61-93 3-39 (247)
443 1yj8_A Glycerol-3-phosphate de 88.3 0.32 1.1E-05 47.6 4.0 34 61-94 22-62 (375)
444 3ew7_A LMO0794 protein; Q8Y8U8 88.3 0.51 1.7E-05 41.8 5.1 32 62-93 2-34 (221)
445 1x0v_A GPD-C, GPDH-C, glycerol 88.3 0.24 8.3E-06 47.9 3.1 34 61-94 9-49 (354)
446 4aj2_A L-lactate dehydrogenase 88.2 0.56 1.9E-05 44.8 5.5 33 60-92 19-53 (331)
447 1hyh_A L-hicdh, L-2-hydroxyiso 88.2 0.37 1.3E-05 45.7 4.3 32 62-93 3-36 (309)
448 1ldn_A L-lactate dehydrogenase 88.2 0.47 1.6E-05 45.2 5.0 34 60-93 6-41 (316)
449 3ius_A Uncharacterized conserv 88.2 0.38 1.3E-05 44.7 4.3 33 61-93 6-38 (286)
450 3o38_A Short chain dehydrogena 88.2 0.64 2.2E-05 42.8 5.8 34 60-93 22-57 (266)
451 3qsg_A NAD-binding phosphogluc 88.2 0.38 1.3E-05 45.8 4.3 33 61-93 25-58 (312)
452 2g5c_A Prephenate dehydrogenas 88.2 0.44 1.5E-05 44.4 4.7 32 62-93 3-36 (281)
453 1coy_A Cholesterol oxidase; ox 88.1 0.4 1.4E-05 49.0 4.7 35 59-93 10-44 (507)
454 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.1 0.48 1.6E-05 48.0 5.2 33 61-93 2-34 (478)
455 2rir_A Dipicolinate synthase, 88.1 0.54 1.9E-05 44.3 5.3 33 61-93 158-190 (300)
456 3vh1_A Ubiquitin-like modifier 88.0 0.43 1.5E-05 49.1 4.8 34 60-93 327-361 (598)
457 3c7a_A Octopine dehydrogenase; 88.0 0.28 9.5E-06 48.6 3.4 31 61-91 3-34 (404)
458 2wtb_A MFP2, fatty acid multif 88.0 0.41 1.4E-05 51.2 4.8 33 61-93 313-345 (725)
459 2o3j_A UDP-glucose 6-dehydroge 87.9 0.35 1.2E-05 49.0 4.1 33 61-93 10-44 (481)
460 3jyo_A Quinate/shikimate dehyd 87.9 0.57 1.9E-05 43.8 5.2 34 60-93 127-161 (283)
461 2cvz_A Dehydrogenase, 3-hydrox 87.8 0.41 1.4E-05 44.7 4.3 31 62-93 3-33 (289)
462 4id9_A Short-chain dehydrogena 87.8 0.56 1.9E-05 45.0 5.4 35 60-94 19-54 (347)
463 2hk9_A Shikimate dehydrogenase 87.8 0.41 1.4E-05 44.6 4.2 33 61-93 130-162 (275)
464 1np3_A Ketol-acid reductoisome 87.8 0.61 2.1E-05 44.9 5.5 33 61-93 17-49 (338)
465 2qrj_A Saccharopine dehydrogen 87.6 0.49 1.7E-05 46.2 4.7 35 59-93 213-251 (394)
466 3c24_A Putative oxidoreductase 87.6 0.51 1.8E-05 44.1 4.8 33 61-93 12-45 (286)
467 3two_A Mannitol dehydrogenase; 87.5 0.53 1.8E-05 45.4 5.0 33 61-93 178-210 (348)
468 3q2o_A Phosphoribosylaminoimid 87.5 0.85 2.9E-05 44.7 6.5 34 61-94 15-48 (389)
469 3ojo_A CAP5O; rossmann fold, c 87.5 0.42 1.4E-05 47.5 4.2 33 61-93 12-44 (431)
470 4gbj_A 6-phosphogluconate dehy 87.4 0.39 1.3E-05 45.3 3.8 34 61-94 6-39 (297)
471 3k5i_A Phosphoribosyl-aminoimi 87.4 0.62 2.1E-05 46.0 5.4 37 57-94 21-57 (403)
472 3h2s_A Putative NADH-flavin re 87.4 0.6 2.1E-05 41.5 5.0 32 62-93 2-34 (224)
473 1tt5_B Ubiquitin-activating en 87.4 0.57 1.9E-05 46.6 5.1 34 60-93 40-74 (434)
474 3zwc_A Peroxisomal bifunctiona 87.3 1.1 3.9E-05 47.7 7.7 33 61-93 317-349 (742)
475 2iz1_A 6-phosphogluconate dehy 87.2 0.63 2.2E-05 47.1 5.5 34 60-93 5-38 (474)
476 1y8q_A Ubiquitin-like 1 activa 87.2 0.49 1.7E-05 45.7 4.4 34 60-93 36-70 (346)
477 3fbt_A Chorismate mutase and s 87.1 0.5 1.7E-05 44.1 4.3 34 60-93 122-156 (282)
478 3t4e_A Quinate/shikimate dehyd 87.0 0.62 2.1E-05 44.1 4.9 34 60-93 148-182 (312)
479 2d5c_A AROE, shikimate 5-dehyd 86.9 0.65 2.2E-05 42.8 5.0 32 62-93 118-149 (263)
480 1hdo_A Biliverdin IX beta redu 86.9 0.73 2.5E-05 40.2 5.2 34 61-94 4-38 (206)
481 3pwz_A Shikimate dehydrogenase 86.7 0.73 2.5E-05 42.7 5.2 34 60-93 120-154 (272)
482 3uko_A Alcohol dehydrogenase c 86.7 0.56 1.9E-05 45.8 4.7 34 60-93 194-228 (378)
483 1nvt_A Shikimate 5'-dehydrogen 86.6 0.46 1.6E-05 44.5 3.9 31 61-92 129-159 (287)
484 3dhn_A NAD-dependent epimerase 86.6 0.51 1.8E-05 42.1 4.0 34 61-94 5-39 (227)
485 4b4o_A Epimerase family protei 86.6 0.8 2.7E-05 42.9 5.5 34 61-94 1-35 (298)
486 1edz_A 5,10-methylenetetrahydr 86.5 0.51 1.7E-05 44.7 4.1 33 60-92 177-210 (320)
487 1piw_A Hypothetical zinc-type 86.5 0.59 2E-05 45.3 4.7 33 61-93 181-213 (360)
488 3d1l_A Putative NADP oxidoredu 86.4 0.61 2.1E-05 43.0 4.6 33 61-93 11-44 (266)
489 3o8q_A Shikimate 5-dehydrogena 86.4 0.74 2.5E-05 42.9 5.1 34 60-93 126-160 (281)
490 1gpj_A Glutamyl-tRNA reductase 86.3 0.52 1.8E-05 46.6 4.2 33 60-92 167-200 (404)
491 1wdk_A Fatty oxidation complex 86.3 0.51 1.7E-05 50.4 4.4 33 61-93 315-347 (715)
492 1uuf_A YAHK, zinc-type alcohol 85.8 0.67 2.3E-05 45.2 4.7 33 61-93 196-228 (369)
493 3on5_A BH1974 protein; structu 85.8 0.4 1.4E-05 46.3 3.0 36 59-94 198-233 (362)
494 2d4a_B Malate dehydrogenase; a 85.8 0.71 2.4E-05 43.7 4.7 32 62-93 1-33 (308)
495 1lu9_A Methylene tetrahydromet 85.8 0.78 2.7E-05 42.9 5.0 32 61-92 120-152 (287)
496 1npy_A Hypothetical shikimate 85.6 0.69 2.4E-05 42.9 4.4 32 61-92 120-152 (271)
497 3nv9_A Malic enzyme; rossmann 85.6 1.6 5.5E-05 43.1 7.0 33 60-92 219-254 (487)
498 1i36_A Conserved hypothetical 85.6 0.62 2.1E-05 42.9 4.1 30 62-91 2-31 (264)
499 1yqd_A Sinapyl alcohol dehydro 85.6 0.71 2.4E-05 44.9 4.7 33 61-93 189-221 (366)
500 3n58_A Adenosylhomocysteinase; 85.5 0.65 2.2E-05 45.9 4.3 34 60-93 247-280 (464)
No 1
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=9.1e-47 Score=392.17 Aligned_cols=393 Identities=20% Similarity=0.212 Sum_probs=280.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEE
Q 010623 56 ECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALF 135 (506)
Q Consensus 56 ~~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 135 (506)
++++++||+||||||+||++|+.|+++|++|+|+||.+.+...+++..++++++++|+++|+++.+.+. ..... ..+
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~~-~~~ 83 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV--ETSTQ-GHF 83 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC--CBCCE-EEE
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc--ccccc-ccc
Confidence 455679999999999999999999999999999999988777788889999999999999999877653 11111 111
Q ss_pred ECCceeeeecCCcCCC-CCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcC
Q 010623 136 KDGNRTQISYPLEKFH-SDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAP 213 (506)
Q Consensus 136 ~~~~~~~~~~~~~~~~-~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~ 213 (506)
.+. ...+. ... ..+..+.++|..+++.|.+.+.+. +++++++ +|+++++++++++ |++.+.+| +.+++||
T Consensus 84 -~~~--~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~ 155 (500)
T 2qa1_A 84 -GGL--PIDFG--VLEGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVT-VEVRGPEG-KHTLRAA 155 (500)
T ss_dssp -TTE--EEEGG--GSTTGGGCEEEEEHHHHHHHHHHHHHHT-TCEEEETCEEEEEEEETTEEE-EEEEETTE-EEEEEES
T ss_pred -cce--ecccc--cCCCCCCceeecCHHHHHHHHHHHHHHC-CCEEECCcEEEEEEEcCCeEE-EEEEcCCC-CEEEEeC
Confidence 111 11111 111 123456789999999999999988 6888888 4999999888655 66655555 4578999
Q ss_pred eEEeecCCcccchhhccCCCCCCccceeeEEEeccCCC-CCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCC----CC
Q 010623 214 LTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLP-FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQK----VP 288 (506)
Q Consensus 214 ~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~ 288 (506)
+||+|||.+|.+|++++++.++......++... ...+ .+....+++.++++++++|.+++..++.+..+... ..
T Consensus 156 ~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 234 (500)
T 2qa1_A 156 YLVGCDGGRSSVRKAAGFDFPGTAATMEMYLAD-IKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRET 234 (500)
T ss_dssp EEEECCCTTCHHHHHTTCCCCEECCCCEEEEEE-EESCCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----
T ss_pred EEEECCCcchHHHHHcCCCcCCCccceEEEEEE-EEeCCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccC
Confidence 999999999999999998766544433443332 1111 12223455667788999999988777776653221 12
Q ss_pred CCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHH
Q 010623 289 SISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 368 (506)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~ 368 (506)
..+.+++.+.+++.+.+.+.. . +......|+.....+.+|..|||+|+|||||.++|++|||+|+||+||.
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~--~-------~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 305 (500)
T 2qa1_A 235 PPSWHEVADAWKRLTGDDIAH--A-------EPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAV 305 (500)
T ss_dssp CCCHHHHHHHHHHHHSCCCTT--S-------EEEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCCCc--c-------ceeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHH
Confidence 345566667666654432210 0 0112235666666788999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH--------------
Q 010623 369 ILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYL-------------- 434 (506)
Q Consensus 369 ~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~~~-------------- 434 (506)
+|+|+|+.+.+ +.+.+++|++|+++|++++..++..++.+.+++.. ++....+|+.....+
T Consensus 306 ~La~~La~~~~---g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~ 380 (500)
T 2qa1_A 306 NLGWKLGAVVN---GTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS--GPEVQPLRDVLTELIQYGEVARHLAGMVS 380 (500)
T ss_dssp HHHHHHHHHHT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CGGGHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHhhhhc
Confidence 99999997642 22346899999999999999999999888888874 455556666543332
Q ss_pred hcCCCCchhHHHhhcCCCCCchhhHHHHHH---------HHHHHH-HHhhccCCC
Q 010623 435 SLGGIFSSGPVSLLSGLNPRPLILVFHFFA---------VAIYGV-GRILLPFPS 479 (506)
Q Consensus 435 ~~g~~~~~~~~~~~~~~~~~p~~~~~h~~~---------~~l~~~-~~~l~~~~~ 479 (506)
..+..|..+ .+..+.||.|+||.|+ .|+++. +|+|+.+.+
T Consensus 381 g~~~~Y~~~-----~~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 430 (500)
T 2qa1_A 381 GLEITYDVG-----TGSHPLLGKRMPALELTTATRETSSTELLHTARGVLLDLAD 430 (500)
T ss_dssp STTCCCCCC-----CCSCTTTTSBCCCCEEECSSCEEEHHHHTTTCCEEEEETTC
T ss_pred cCCCccCCC-----CCcCCcCCCCCCCCeeecCCCcEeHHHHhCCCeEEEEEeCC
Confidence 123344331 1224678999999864 888854 599988754
No 2
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.6e-46 Score=390.29 Aligned_cols=390 Identities=19% Similarity=0.194 Sum_probs=279.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+++||+||||||+||++|+.|+++|++|+|+||.+.+...+++..++++++++|+++|+++.+.+. ..... ..+ .+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~~-~~~-~~ 86 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV--ETSTQ-GHF-GG 86 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC--CEESE-EEE-TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc--ccccc-cee-cc
Confidence 469999999999999999999999999999999988777788889999999999999999877653 11111 111 11
Q ss_pred ceeeeecCCcCCC-CCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKFH-SDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~~-~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
. ...+. ... ..+..+.++|..+++.|.+.+.+. +++++++ +|+++++++++++ |++.+.+| +.+++||+||
T Consensus 87 ~--~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~~vV 159 (499)
T 2qa2_A 87 R--PVDFG--VLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVV-VEVEGPDG-PRSLTTRYVV 159 (499)
T ss_dssp E--EEEGG--GSTTCCCEEEEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEEECSSCEE-EEEECSSC-EEEEEEEEEE
T ss_pred e--ecccc--cCCCCCCceEecCHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCC-cEEEEeCEEE
Confidence 1 11111 111 223456789999999999999987 6888888 5999998887654 55555555 4578999999
Q ss_pred eecCCcccchhhccCCCCCCccceeeEEEeccCCC-CCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCC----CCCCC
Q 010623 217 VCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLP-FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQK----VPSIS 291 (506)
Q Consensus 217 ~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~ 291 (506)
+|||++|.+|++++++.++......++... ...+ .+....+++.++++++++|.+++..++.+..+... ....+
T Consensus 160 gADG~~S~VR~~lg~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~ 238 (499)
T 2qa2_A 160 GCDGGRSTVRKAAGFDFPGTSASREMFLAD-IRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPP 238 (499)
T ss_dssp ECCCTTCHHHHHTTCCCCEECCCCCEEEEE-EESCCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCC
T ss_pred EccCcccHHHHHcCCCCCCCCCccEEEEEE-EEECCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCC
Confidence 999999999999998765544333333322 1111 12223455677788999999988777777653221 12345
Q ss_pred chHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHHH
Q 010623 292 NGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILR 371 (506)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La 371 (506)
.+++.+.+++.+.+.+.. .+......|+.....+.+|..|||+|+|||||.++|++|||+|+||+||.+|+
T Consensus 239 ~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La 309 (499)
T 2qa2_A 239 YQEVAAAWQRLTGQDISH---------GEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLG 309 (499)
T ss_dssp HHHHHHHHHHHHSCCCTT---------CEEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCc---------cceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHH
Confidence 666777776654432210 01112345666667789999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH--------------hcC
Q 010623 372 NLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYL--------------SLG 437 (506)
Q Consensus 372 ~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~~~--------------~~g 437 (506)
|+|+.+.+ +.+.+++|++|+++|++++..++..++.+.+++.. ++....+|+...+.+ ..+
T Consensus 310 ~~La~~l~---g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 384 (499)
T 2qa2_A 310 WKLAAVVS---GRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS--GDEMQPLRDVLSELIRYDEVSRHLAGMVSGLD 384 (499)
T ss_dssp HHHHHHHT---TSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CGGGHHHHHHHHHHHTSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHHHHHhCCC
Confidence 99997642 12346899999999999999999999888888874 455556666554332 123
Q ss_pred CCCchhHHHhhcCCCCCchhhHHHHHH---------HHHHHH-HHhhccCCC
Q 010623 438 GIFSSGPVSLLSGLNPRPLILVFHFFA---------VAIYGV-GRILLPFPS 479 (506)
Q Consensus 438 ~~~~~~~~~~~~~~~~~p~~~~~h~~~---------~~l~~~-~~~l~~~~~ 479 (506)
..|..+ .+..+.||.|+||.|+ .|+++. +|+|+.+.+
T Consensus 385 ~~Y~~~-----~~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 431 (499)
T 2qa2_A 385 IRYEVD-----GGDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIAD 431 (499)
T ss_dssp CCCCCC-----SCSCTTTTSBCCCCEEECSSSEEETTGGGTTCSEEEEECSC
T ss_pred CccCCC-----CCCCCCCCCCCCCCeeecCCCceeHHHHhcCCeEEEEEecC
Confidence 334321 1224678999999975 678854 588888654
No 3
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=6.5e-48 Score=405.83 Aligned_cols=406 Identities=20% Similarity=0.167 Sum_probs=288.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecc--eE--E
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG--YA--L 134 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~--~~--~ 134 (506)
.++||+||||||+||++|+.|+++|++|+|+||++.....+++..++++++++|+++|+++.+.......... +. .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 3589999999999999999999999999999999888788888999999999999999999887754322211 11 1
Q ss_pred EE--CCceee-e--ecCCc----CCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCC----eEEEEEE
Q 010623 135 FK--DGNRTQ-I--SYPLE----KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG----TIKGVQY 200 (506)
Q Consensus 135 ~~--~~~~~~-~--~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~----~v~~v~v 200 (506)
.. .+.... . .++.. ........+.++|..+++.|.+.+.+. ++++++++ |++++++++ +++ +++
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~~~v~-v~~ 161 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH-GGAIRFGTRLLSFRQHDDDAGAGVT-ARL 161 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEECGGGCSEEE-EEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEECCCCccccEE-EEE
Confidence 11 122111 0 11100 000112256789999999999999998 78898885 999998877 654 665
Q ss_pred EeCCccEEEEEcCeEEeecCCcccchhhccCCCCCCcc--ceeeEEEeccCCCC----CCe-eEEEecCCCcEEEEecCC
Q 010623 201 KTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPS--CFVGLVLENCNLPF----ENH-GHVVLADPSPILFYPISS 273 (506)
Q Consensus 201 ~~~~G~~~~i~a~~vV~AdG~~S~vR~~l~~~~~~~~~--~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~p~~~ 273 (506)
.+.+| ..+++||+||+|||.+|.+|++++++..+... ....+.+. .+++. ... ..++..+.+..+++|+.+
T Consensus 162 ~~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~ 239 (535)
T 3ihg_A 162 AGPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFD-ADLSGIMEPGTTGWYYLHHPEFKGTFGPTDR 239 (535)
T ss_dssp EETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEE-CCGGGTSCTTCCEEEEEECSSCEEEEEECSS
T ss_pred EcCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEe-ccChhhccCCceEEEEEECCCceEEEEEecC
Confidence 55555 46789999999999999999999887654432 22222222 23321 112 233445666788889987
Q ss_pred -CeEEEEEEecCCC---CCCCCchHHHHHHHHhcCC-CCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccC
Q 010623 274 -NEVRCLVDIPGQK---VPSISNGEMANYLKTVVAP-QIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDA 348 (506)
Q Consensus 274 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDA 348 (506)
+.+.+.+..+++. .+..+.+++.+.+++.+.. ..+.+ ......|++....+.+|..|||+|+|||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~~grv~LvGDA 309 (535)
T 3ihg_A 240 PDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPE----------LVDIQGWEMAARIAERWREGRVFLAGDA 309 (535)
T ss_dssp TTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCE----------EEEEEEEEEEEEEESCSEETTEEECTTT
T ss_pred CCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCcee----------EEEeeEeeeeEEEECccccCCEEEEecc
Confidence 4444444444432 2345566677777765542 11111 1234567777777899999999999999
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHHH
Q 010623 349 FNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQ 428 (506)
Q Consensus 349 Ah~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r~ 428 (506)
||.++|++|||+|+||+||.+|+|+|+.+.+ +.+.+++|++|+++|+|++..++..|..+.+.+..+ +......+.
T Consensus 310 AH~~~P~~GqG~n~ai~DA~~La~~La~~l~---g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~~-~~~~~~~~~ 385 (535)
T 3ihg_A 310 AKVTPPTGGMSGNAAVADGFDLAWKLAAVLQ---GQAGAGLLDTYEDERKVAAELVVAEALAIYAQRMAP-HMAEVWDKS 385 (535)
T ss_dssp TEECCSTTSCHHHHHHHHHHHHHHHHHHHHT---TSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG-GGTTTSCCC
T ss_pred cccCCCccCCccccccccHHHHHHHHHHHhc---CCCcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhccc-ccCcccccc
Confidence 9999999999999999999999999998642 122357999999999999999999998887766443 211111122
Q ss_pred HHHHHHhcCCCCchhHHHhhc----------CCCCCchhhHHHHHH---------HHHHHHHHhhccCCChHH
Q 010623 429 ACFDYLSLGGIFSSGPVSLLS----------GLNPRPLILVFHFFA---------VAIYGVGRILLPFPSPYR 482 (506)
Q Consensus 429 ~~~~~~~~g~~~~~~~~~~~~----------~~~~~p~~~~~h~~~---------~~l~~~~~~l~~~~~~~~ 482 (506)
.....+..|++|.++++...+ ...++||.|+||.|+ +||+|.+|+|++++....
T Consensus 386 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~pG~r~p~~~l~~~~~~~~~~dl~g~~f~ll~~~~~~~ 458 (535)
T 3ihg_A 386 VGYPETLLGFRYRSSAVLATDDDPARVENPLTPSGRPGFRGPHVLVSRHGERLSTVDLFGDGWTLLAGELGAD 458 (535)
T ss_dssp CCHHHHHTSBCCCSTTCCCSCCCCCSBCCTTSCCCCTTSBCCCCEEEETTEEEEGGGGCSSSEEEEECTTCHH
T ss_pred cccceeeeCcccCCCceecCCCCCCcccccCCCCCCCCCcCCCceeecCCceeeHHHhcCCceEEEecCCccH
Confidence 233457789999998875433 235789999999987 999999999999876554
No 4
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.9e-45 Score=387.18 Aligned_cols=400 Identities=17% Similarity=0.143 Sum_probs=271.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceec--ceEEEE
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVF--GYALFK 136 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~~ 136 (506)
.++||+||||||+||++|+.|+++|++|+|+||.+.....+++..++++++++|+++|+.+.+.+....... ....+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 358999999999999999999999999999999988777788889999999999999999888764322111 111111
Q ss_pred --CCce-eeeecCCc----CC-CCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEe-CCcc
Q 010623 137 --DGNR-TQISYPLE----KF-HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGE 206 (506)
Q Consensus 137 --~~~~-~~~~~~~~----~~-~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~-~~G~ 206 (506)
.+.. ....++.. .. ......+.++|..+++.|.+.+.+. ++++ +|+++++++++++ +++.+ .+|+
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~v~-v~~~~~~~G~ 179 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQRDDHVR-ATITDLRTGA 179 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEECSSCEE-EEEEETTTCC
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEEeCCEEE-EEEEECCCCC
Confidence 1222 11222110 00 1122346788999999999999875 6667 4999998888665 55554 3476
Q ss_pred EEEEEcCeEEeecCCcccchhhccCCCCCCccceeeE--EEeccCCC-----CCCeeEEEecCC-CcEEEEecCCCeEEE
Q 010623 207 ELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGL--VLENCNLP-----FENHGHVVLADP-SPILFYPISSNEVRC 278 (506)
Q Consensus 207 ~~~i~a~~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~-~~~~~~p~~~~~~~~ 278 (506)
..+++||+||+|||.+|.+|++++++..+.......+ .+...+++ .+...++++.++ +.++++|++++. .|
T Consensus 180 ~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~~ 258 (549)
T 2r0c_A 180 TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG-LY 258 (549)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS-EE
T ss_pred EEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc-EE
Confidence 5678999999999999999999998765544322222 22111110 111223444555 678899997643 44
Q ss_pred EEEecCCCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcch
Q 010623 279 LVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGG 358 (506)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~Gq 358 (506)
.+.++.+... .+.+++.+.+++.+.+.++.+ ......|+.....+.+|..|||+|+|||||.++|++||
T Consensus 259 ~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~Gq 327 (549)
T 2r0c_A 259 RLTVGVDDAS-KSTMDSFELVRRAVAFDTEIE----------VLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGF 327 (549)
T ss_dssp EEEEECSTTC-CSCCCHHHHHHHHBCSCCCCE----------EEEEEEEEECCEECSCSEETTEEECGGGTEECCCGGGH
T ss_pred EEEecCCCCC-CCHHHHHHHHHHHhCCCCcee----------EEEEecchhHhhhHHhhcCCcEEEEccccccCCCccCC
Confidence 4444422212 566777788877665422211 11234566666778899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCC--------CchhHHHHHHHH
Q 010623 359 GMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS--------PDEARKEMRQAC 430 (506)
Q Consensus 359 G~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~--------~~~~~~~~r~~~ 430 (506)
|+|+||+||.+|+|+|+.+.+ +.+.+++|++|+++|+|++..++..+..+.+.+... .++....+|+.+
T Consensus 328 G~n~gi~DA~~La~~La~~l~---g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 404 (549)
T 2r0c_A 328 GMNTGIGSAADLGWKLAATLR---GWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAV 404 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---TCSCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHHH
Confidence 999999999999999997642 122357999999999999999999988887776531 255666777776
Q ss_pred HHHHh--------------cCCCCchhHHHhhcC----------CCCCchhhHHHHHH------HHHHHHHHhhccCCC
Q 010623 431 FDYLS--------------LGGIFSSGPVSLLSG----------LNPRPLILVFHFFA------VAIYGVGRILLPFPS 479 (506)
Q Consensus 431 ~~~~~--------------~g~~~~~~~~~~~~~----------~~~~p~~~~~h~~~------~~l~~~~~~l~~~~~ 479 (506)
.+++. .+.+|..+++. ..+ ..+.||.|+||.|+ .|+++.+|+|+.+..
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~-~~~~~~~~~~~~~~~~~~G~r~p~~~l~~g~~l~d~~~~~~~ll~~~~ 482 (549)
T 2r0c_A 405 AEKLERSGARREFDAPGIHFGHTYRSSIVC-GEPETEVATGGWRPSARPGARAPHAWLTPTTSTLDLFGRGFVLLSFGT 482 (549)
T ss_dssp HHHHHHTTGGGGGSCHHHHHCCCCCSTTSC-CC---------CCCCCCTTSBCCCCBSSSSCBGGGGCSSSEEEEEESC
T ss_pred HHHHHhhcccccccccceEeccEeCCcccc-CCCCCCccccccCCCCCCCCcCCCcEeCCCcCHHHHcCCceEEEEcCC
Confidence 65543 34566655443 111 13689999999875 788888999987653
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.3e-43 Score=358.87 Aligned_cols=362 Identities=17% Similarity=0.134 Sum_probs=258.0
Q ss_pred ccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecc
Q 010623 52 ALNGECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG 131 (506)
Q Consensus 52 ~~~~~~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 131 (506)
..+.+.+.++||+||||||+||++|+.|+++|++|+|+||.+......++..+++++.+.|+++|+++.+.... .....
T Consensus 15 ~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~-~~~~~ 93 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFG-GPLRR 93 (407)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHS-CCCCE
T ss_pred CCcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhc-CCCcc
Confidence 33344456799999999999999999999999999999999877777788889999999999999998887643 23445
Q ss_pred eEEEECC-ceeeeecCCcCC--CCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccE
Q 010623 132 YALFKDG-NRTQISYPLEKF--HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEE 207 (506)
Q Consensus 132 ~~~~~~~-~~~~~~~~~~~~--~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~ 207 (506)
+.++... ......++.... ......+.++|..|.+.|.+.+.+ ++++++ +|++++.++++ |+++..+|+
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~- 166 (407)
T 3rp8_A 94 MAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADG---VTVWFTDGS- 166 (407)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTE---EEEEETTSC-
T ss_pred eEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCc---EEEEEcCCC-
Confidence 5555543 222222222111 012345678999999999999976 556677 49999998884 566678887
Q ss_pred EEEEcCeEEeecCCcccchhhc-cCCCCCCccceeeEEEe---ccCCCCCCeeEEEecCCCcEEEEecCCCeEEEEEEec
Q 010623 208 LTAYAPLTIVCDGCFSNLRRSL-CNPKVDVPSCFVGLVLE---NCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDIP 283 (506)
Q Consensus 208 ~~i~a~~vV~AdG~~S~vR~~l-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 283 (506)
+++||+||+|||.+|.+|+.+ +.........+..+... ....+.......+++++++++++|+++++..|.+..+
T Consensus 167 -~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 245 (407)
T 3rp8_A 167 -SASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVP 245 (407)
T ss_dssp -EEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEE
T ss_pred -EEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeC
Confidence 467999999999999999999 54322222222222111 1122333445566788889999999999888888776
Q ss_pred CCCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCC--eEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhH
Q 010623 284 GQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGN--IKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMT 361 (506)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n 361 (506)
.......+.++..+.+.+.+. .+.+.+.+.+........ ...++... ..+|..+||+|+|||||.++|++|||+|
T Consensus 246 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~ 322 (407)
T 3rp8_A 246 LPAGLAEDRDTLRADLSRYFA-GWAPPVQKLIAALDPQTTNRIEIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGC 322 (407)
T ss_dssp CCTTCSCCTTTHHHHHHHHTT-TCCHHHHHHHHHSCGGGCEEEEEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHH
T ss_pred CCcCCCCCchhHHHHHHHHhc-CCChHHHHHHHcCCccceeEEeeEecCC--CCceecCCEEEEEcccccCCcchhhhHH
Confidence 443333445566666666544 344444443322211111 33344333 3788899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Q 010623 362 VALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFD 432 (506)
Q Consensus 362 ~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~ 432 (506)
+||+||.+|+++|... + ..+++|+.|+++|++++..++..++.+.++++.. ++....+|+..+.
T Consensus 323 ~al~da~~La~~L~~~-----~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~R~~~l~ 386 (407)
T 3rp8_A 323 AAMEDAVVLGAVFRQT-----R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK-DMQLTEAWYQELR 386 (407)
T ss_dssp HHHHHHHHHHHHHHSC-----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC-----C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CHHHHHHHHHHHh
Confidence 9999999999999853 1 4578999999999999999999999999999886 8888888988765
No 6
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2e-44 Score=385.97 Aligned_cols=392 Identities=19% Similarity=0.214 Sum_probs=269.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEE
Q 010623 60 DADVIVVGAGVAGAALANTLAK-----DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~-----~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 134 (506)
++||+||||||+||++|+.|++ +|++|+||||.+.+...+++..++++++++|+++|+++.+.... .+...+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~-~~~~~~~~ 86 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEA-NDMSTIAL 86 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTC-BCCCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhc-cccceEEE
Confidence 5899999999999999999999 99999999999877777788889999999999999999887643 34455666
Q ss_pred EECCc---eee-eecCCcCCC-CCcccccccchHHHHHHHHHHHcCC--CEEEEece-EEEEEeeC--------CeEEEE
Q 010623 135 FKDGN---RTQ-ISYPLEKFH-SDVAGRGFHNGRFVQRLREKAASLP--NVRLEQGT-VTSLLEEK--------GTIKGV 198 (506)
Q Consensus 135 ~~~~~---~~~-~~~~~~~~~-~~~~~~~i~~~~l~~~L~~~~~~~~--~v~i~~~~-v~~~~~~~--------~~v~~v 198 (506)
|.... ... ..++..... .......++|..+++.|.+.+.+.+ ++++++++ ++++++++ ..|+ +
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~-v 165 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVT-M 165 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEE-E
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEE-E
Confidence 65432 111 111111111 1223456899999999999998874 47888885 99998764 2333 5
Q ss_pred EEEe----------------------------------------CCccEEEEEcCeEEeecCCcccchhhccCCCCCCcc
Q 010623 199 QYKT----------------------------------------KAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPS 238 (506)
Q Consensus 199 ~v~~----------------------------------------~~G~~~~i~a~~vV~AdG~~S~vR~~l~~~~~~~~~ 238 (506)
++.+ .+|+..+++||+||+|||++|.||++++++..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~ 245 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQT 245 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEE
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCc
Confidence 5554 356656789999999999999999999987654433
Q ss_pred ceeeEEEe---ccCCCCCCeeE-EEecCCCcEEEEecCCCeEEEEEEecCCC-------CCCCCchHHHHHHHHhcCCCC
Q 010623 239 CFVGLVLE---NCNLPFENHGH-VVLADPSPILFYPISSNEVRCLVDIPGQK-------VPSISNGEMANYLKTVVAPQI 307 (506)
Q Consensus 239 ~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 307 (506)
.....+.. ..+.|...... ++..++++++++|.+++..++++..+... ....+.+++.+.+++.+.+..
T Consensus 246 ~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~ 325 (665)
T 1pn0_A 246 DYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYT 325 (665)
T ss_dssp EEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSC
T ss_pred cEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCccc
Confidence 22211111 22334322222 22235788999999998888887765432 123455666666655444321
Q ss_pred ChhhhHHHHhhhcCCCeEEecCCccCCCCCC-CCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHH
Q 010623 308 PREIFHSFVAAVDGGNIKTMPNRSMPAAPYP-TPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPAL 386 (506)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~ 386 (506)
. ++. ....+..+++..+.+.+|. .|||+|+|||||.++|++|||||+||+||.+|+|+|+.+.+ +.+.
T Consensus 326 ~-~~~-------~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~---g~a~ 394 (665)
T 1pn0_A 326 F-DVQ-------QLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT---GRAK 394 (665)
T ss_dssp C-EEE-------EEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred C-cee-------eEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc---CCCc
Confidence 1 110 0112334555566788998 79999999999999999999999999999999999997653 2234
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCch--------hHHHHHHHHH---H-HHhcCCCCchhHHHhhc-----
Q 010623 387 CNYLESFYTLRKPVASTINTLAGALYQVFSASPDE--------ARKEMRQACF---D-YLSLGGIFSSGPVSLLS----- 449 (506)
Q Consensus 387 ~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~--------~~~~~r~~~~---~-~~~~g~~~~~~~~~~~~----- 449 (506)
+++|++|+++|++++..++..++.+.++|...+.. ....+.+... + ....+..|..+++....
T Consensus 395 ~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~ 474 (665)
T 1pn0_A 395 RDILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDENLVTDKKSSKQE 474 (665)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCSBTTBCSTTCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhhccccccCcccCCCcccCCCccccc
Confidence 57999999999999999999999998988754210 1222322221 1 23456778776653210
Q ss_pred -CCCCCchhhHHHHHH
Q 010623 450 -GLNPRPLILVFHFFA 464 (506)
Q Consensus 450 -~~~~~p~~~~~h~~~ 464 (506)
....+||.|+||+|+
T Consensus 475 ~~~~~~~G~r~p~~~~ 490 (665)
T 1pn0_A 475 LAKNCVVGTRFKSQPV 490 (665)
T ss_dssp GBTTSCTTSBCCCCEE
T ss_pred cCCCCCCcCCCCCCeE
Confidence 123579999999875
No 7
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=3e-43 Score=370.38 Aligned_cols=399 Identities=18% Similarity=0.171 Sum_probs=272.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+++||+||||||+||++|+.|+++|++|+||||.+.+....++..++++++++|+++|+++.+.......... .+ .+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~--~~-~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGL--PF-AG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBC--CB-TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCc--ee-CC
Confidence 5689999999999999999999999999999999888778888999999999999999999887654322110 01 11
Q ss_pred ceeeeecCCcCC-CCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKF-HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
. ....+..... ...+..+.+++..+++.|.+.+.+. +++++++ +|++++++++++. |++.+.+|+ .+++||+||
T Consensus 125 ~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~-~~~~a~~vV 200 (570)
T 3fmw_A 125 I-FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVE-VTVAGPSGP-YPVRARYGV 200 (570)
T ss_dssp B-CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEECCBCSSCEE-EEEEETTEE-EEEEESEEE
T ss_pred c-ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCeEE-EEEEeCCCc-EEEEeCEEE
Confidence 1 0001111111 1223456789999999999999887 7899888 4999998887654 555557774 457899999
Q ss_pred eecCCcccchhhccCCCCCCccceeeEEEeccCCCCCC-eeEEEecCCCcEEE-EecCCCeE-EEEEEecCCC----CCC
Q 010623 217 VCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFEN-HGHVVLADPSPILF-YPISSNEV-RCLVDIPGQK----VPS 289 (506)
Q Consensus 217 ~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~----~~~ 289 (506)
+|||.+|.+|++++++.++..+...+++.. ...+.+. ...+.+.+.+++++ +|++++.. ++++..+... ...
T Consensus 201 ~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~ 279 (570)
T 3fmw_A 201 GCDGGRSTVRRLAADRFPGTEATVRALIGY-VTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGP 279 (570)
T ss_dssp ECSCSSCHHHHHTTCCCCCCCCCEEEEEEE-CCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CC
T ss_pred EcCCCCchHHHHcCCCCccceeeeEEEEEE-EEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccC
Confidence 999999999999998877666655555443 2222221 11113455667777 79998876 6777654322 122
Q ss_pred CCchHHHHHHHHhcCCCCChhhhHHHHhhhcCC-CeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHH
Q 010623 290 ISNGEMANYLKTVVAPQIPREIFHSFVAAVDGG-NIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 368 (506)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~ 368 (506)
.+.+++.+.+++.+...+. ..+.. ....|+.....+.+|..|||+|+|||||.++|++|||+|+||+||.
T Consensus 280 ~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~ 350 (570)
T 3fmw_A 280 VTLEDLGAAVARVRGTPLT---------LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAV 350 (570)
T ss_dssp CCHHHHHHHTTSSSSCCCC---------CCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccc---------cceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHH
Confidence 3444555444433221111 11122 4567888888899999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh-------------
Q 010623 369 ILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLS------------- 435 (506)
Q Consensus 369 ~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~~~~------------- 435 (506)
+|+|+|+.+.. +.+.+++|++|+++|++++..++..++.+.++|... .+....+|+..+..+.
T Consensus 351 ~La~~La~~~~---g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~-~~~~~~lR~~~~~l~~~~~~~~~~~~~~~ 426 (570)
T 3fmw_A 351 NLGWKLAARVR---GWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPD-EQHTTPLRGFVEELLGTDEVNRYFTGMIT 426 (570)
T ss_dssp HHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC-TTTHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99999987632 123468999999999999999999999999998764 3437788887765531
Q ss_pred -cCCCCchhHHHhhcC-CCCCchhhHHHHH----------HHHHHHHH-HhhccCCC
Q 010623 436 -LGGIFSSGPVSLLSG-LNPRPLILVFHFF----------AVAIYGVG-RILLPFPS 479 (506)
Q Consensus 436 -~g~~~~~~~~~~~~~-~~~~p~~~~~h~~----------~~~l~~~~-~~l~~~~~ 479 (506)
.+.+|..+ ....+. ..+.+|.++|++. +.+++..+ |+|+.+..
T Consensus 427 g~~~~Y~~~-~~~~~~~~~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 427 GTDVRYATF-APAASARPHPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp STTCCCCCS-CC----CCCSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred CCCcccCCC-CCCCCCCCCccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 12233221 000001 2355677777763 46776554 77776554
No 8
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=3.9e-43 Score=375.50 Aligned_cols=408 Identities=18% Similarity=0.181 Sum_probs=267.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 58 PFDADVIVVGAGVAGAALANTLAK-DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~-~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
+.++||+||||||+||++|+.|++ +|++|+|+||.+.+...+++..++++++++|+++|+.+.+..... ......++.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~-~~~~~~~~~ 108 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEAC-WINDVTFWK 108 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEEE
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcc-cccceEEEC
Confidence 346899999999999999999999 999999999998877777888999999999999999988766432 334455554
Q ss_pred C-----Cceeee-ecCCcCCC-CCcccccccchHHHHHHHHHHHcCC-CEEEEece-EEEEEeeCC---eEEEEEEEe--
Q 010623 137 D-----GNRTQI-SYPLEKFH-SDVAGRGFHNGRFVQRLREKAASLP-NVRLEQGT-VTSLLEEKG---TIKGVQYKT-- 202 (506)
Q Consensus 137 ~-----~~~~~~-~~~~~~~~-~~~~~~~i~~~~l~~~L~~~~~~~~-~v~i~~~~-v~~~~~~~~---~v~~v~v~~-- 202 (506)
. +..... .++..... .......++|..+++.|.+.+.+.+ ++++++++ |++++++++ ..+.|++.+
T Consensus 109 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~ 188 (639)
T 2dkh_A 109 PDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCD 188 (639)
T ss_dssp ECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECS
T ss_pred CCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecc
Confidence 2 221111 11111111 1223457899999999999999986 45888875 999988753 122366554
Q ss_pred --CCccEEEEEcCeEEeecCCcccchhhccCCCCCCcccee-eEEE--eccCCCCCCeeEEEecCCCcEEEEecCCC-eE
Q 010623 203 --KAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFV-GLVL--ENCNLPFENHGHVVLADPSPILFYPISSN-EV 276 (506)
Q Consensus 203 --~~G~~~~i~a~~vV~AdG~~S~vR~~l~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~ 276 (506)
.+|+..+++||+||+|||++|.+|++++++..+...... ++.- ...+.+.......+..++++++++|.+++ ..
T Consensus 189 ~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~ 268 (639)
T 2dkh_A 189 AAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLV 268 (639)
T ss_dssp GGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCE
T ss_pred ccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEE
Confidence 367666789999999999999999999986544332211 2211 12233432222222236778899999888 67
Q ss_pred EEEEEecC--CC----CCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCC------------
Q 010623 277 RCLVDIPG--QK----VPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYP------------ 338 (506)
Q Consensus 277 ~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 338 (506)
++++..+. .. ....+.+++.+.+++.+.+... ++. ....+..++.....+.+|.
T Consensus 269 r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 340 (639)
T 2dkh_A 269 RFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKL-EVK-------NVPWWSVYEIGQRICAKYDDVVDAVATPDSP 340 (639)
T ss_dssp EEEEECC-----------CCCHHHHHHHHHHHHTTSCE-EEE-------EEEEEEEECCCCEECSCSBSCCCSSCCTTSC
T ss_pred EEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccC-cce-------eeeEEEecccccchhhhhhccccccccccCc
Confidence 77776553 11 1224455565655554433110 010 0112234555555667776
Q ss_pred CCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCC
Q 010623 339 TPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS 418 (506)
Q Consensus 339 ~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~ 418 (506)
.|||+|+|||||.++|++|||+|+||+||.+|+|+|+.+.+ +.+.+++|++|+++|++++..++..++.+.+++...
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~---g~a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLR---KQCAPELLHTYSSERQVVAQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHT---TSBCGGGGHHHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHc---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999999999999999999999998653 223457999999999999999999988877777653
Q ss_pred Cchh------HHHHHHH----HHHHHhcCCCCchhHHHhhc-----CCCCCchhhHHHHHH-----------HHHHH--H
Q 010623 419 PDEA------RKEMRQA----CFDYLSLGGIFSSGPVSLLS-----GLNPRPLILVFHFFA-----------VAIYG--V 470 (506)
Q Consensus 419 ~~~~------~~~~r~~----~~~~~~~g~~~~~~~~~~~~-----~~~~~p~~~~~h~~~-----------~~l~~--~ 470 (506)
+... ...+.+. .......+.+|..+++.... ....+||.|+||.|+ .|++. .
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~~~~~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g 497 (639)
T 2dkh_A 418 AKEGGQGGVDPKEFQKYFEQHGRFTAGVGTHYAPSLLTGQAKHQALASGFTVGMRFHSAPVVRVCDAKPVQLGHCGKADG 497 (639)
T ss_dssp ---------CHHHHHHHHHHHHHHHTTCCCCCCSSSSSCCCTTGGGBTTSCTTSBCCCCEEEETTTCCEEEGGGGCCSSS
T ss_pred CcccccccccHHHHHHHHHHhccccccCCcccCCCCccCCCCccccCCCCCCcCCCCCCeEEecCCCCEEEHHHhhccCC
Confidence 2110 1122221 11123456778776553211 122569999999875 45553 3
Q ss_pred HHhhccC
Q 010623 471 GRILLPF 477 (506)
Q Consensus 471 ~~~l~~~ 477 (506)
.|+|+.+
T Consensus 498 ~~~ll~~ 504 (639)
T 2dkh_A 498 RWRLYAF 504 (639)
T ss_dssp CEEEEEE
T ss_pred CEEEEEe
Confidence 5777653
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-41 Score=345.66 Aligned_cols=359 Identities=21% Similarity=0.235 Sum_probs=252.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+||||||+|+++|+.|+++|++|+|+||.+......++..+++++.+.|+++|+++.+.... .......++....
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~g 84 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRG-GRVRHELEVYHDG 84 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTT-CEEECEEEEEETT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhC-CCcceeEEEeCCC
Confidence 489999999999999999999999999999999776666778889999999999999998876533 2344555554322
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.....++.........++.++|..+.+.|.+.+.+.+++++++++ |++++.+++++++ .++..+|+ +++||+||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g-~v~~~~g~--~~~ad~vV~A 161 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAID-QVRLNDGR--VLRPRVVVGA 161 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEE-EEEETTSC--EEEEEEEEEC
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEE-EEEECCCC--EEECCEEEEC
Confidence 222222222222233457789999999999999987689998885 9999988775420 45567786 4679999999
Q ss_pred cCCcccchhhccCCCCCC--ccce--eeEEEe-ccCCCCCCeeEEEecC-CCcEEEEecCCCeEEEEEEecCCCCC----
Q 010623 219 DGCFSNLRRSLCNPKVDV--PSCF--VGLVLE-NCNLPFENHGHVVLAD-PSPILFYPISSNEVRCLVDIPGQKVP---- 288 (506)
Q Consensus 219 dG~~S~vR~~l~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~---- 288 (506)
||.+|.+|+.++...... .... .++... ..+.+. .. .++.+ +++++++|++++...|.+.++.+..+
T Consensus 162 dG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T 2x3n_A 162 DGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAER--NR-LYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMA 238 (399)
T ss_dssp CCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHC--EE-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHHHH
T ss_pred CCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCC--cc-EEEcCCCcEEEEEEcCCCEEEEEEEeCccccccccc
Confidence 999999999998754333 2222 333221 111222 23 66677 88999999998766666644422110
Q ss_pred CCCchHHHHHHHHhcCCCCChhhh-HHHHhhhcCCCeEEecCCc-cCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHH
Q 010623 289 SISNGEMANYLKTVVAPQIPREIF-HSFVAAVDGGNIKTMPNRS-MPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSD 366 (506)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~D 366 (506)
..+.+++.+.+.. +.+.+. ..+ +......+..+++.. ....+|..+||+|+|||||.++|++|||+|+||+|
T Consensus 239 ~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~d 312 (399)
T 2x3n_A 239 DTRGESLRRRLQR-----FVGDESAEAI-AAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIED 312 (399)
T ss_dssp STTSHHHHHHHHT-----TCCGGGHHHH-HTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHH
T ss_pred cCCHHHHHHHHhh-----cCCcchhhHH-hcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHH
Confidence 1234455555542 233332 222 222222446677766 56788999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh
Q 010623 367 IVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLS 435 (506)
Q Consensus 367 a~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~~~~ 435 (506)
|.+|+++|...... +.+.+++|++|+++|++++..++..++.+.+++... ++....+ +..+..+.
T Consensus 313 a~~La~~L~~~~~~--~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~-~~~~~~~~ 377 (399)
T 2x3n_A 313 ASALADALDLALRD--ACALEDALAGYQAERFPVNQAIVSYGHALATSLEDR-QRFAGVF-DTALQGSS 377 (399)
T ss_dssp HHHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHH-HC------
T ss_pred HHHHHHHHHhhhcc--cchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhccc-CchHHHH-HHHHhhhc
Confidence 99999999876421 223578999999999999999999999999988765 6666666 76665543
No 10
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.1e-40 Score=339.19 Aligned_cols=341 Identities=16% Similarity=0.182 Sum_probs=213.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccc--ccccccchHHHHHHhCchhHHhhcccc--e-ecceEEE
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV--GELLQPGGYLKLIELGLEDCVEQIDAQ--R-VFGYALF 135 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~--g~~l~~~~~~~l~~~g~~~~~~~~~~~--~-~~~~~~~ 135 (506)
.+|+||||||+||++|+.|+++|++|+|+||++.+..... +..++++++++|+++|+.+.+...... . .....++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 6899999999999999999999999999999987766544 456789999999999998776543211 1 1112222
Q ss_pred ECCceeee-ecCCcC---CCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEE
Q 010623 136 KDGNRTQI-SYPLEK---FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTA 210 (506)
Q Consensus 136 ~~~~~~~~-~~~~~~---~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i 210 (506)
........ ...... .........++|..|.+.|.+.+. ..+++++ ++++++.+++ +|++.++||++ +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~----~~v~~~~~v~~~~~~~~~--~v~v~~~dG~~--~ 153 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA----NTIQWNKTFVRYEHIENG--GIKIFFADGSH--E 153 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCT----TTEECSCCEEEEEECTTS--CEEEEETTSCE--E
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc----ceEEEEEEEEeeeEcCCC--eEEEEECCCCE--E
Confidence 22211111 100000 011122346789999999887653 2366774 9999876553 35677889974 5
Q ss_pred EcCeEEeecCCcccchhhccCCCCCCccceeeEEEec-cC------CC---CCCeeEEEec-CCCcE------------E
Q 010623 211 YAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLEN-CN------LP---FENHGHVVLA-DPSPI------------L 267 (506)
Q Consensus 211 ~a~~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~-~~------~~---~~~~~~~~~~-~~~~~------------~ 267 (506)
+||+||+|||.+|.||+++++...........+.... .. .+ ........+. .+... .
T Consensus 154 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T 4hb9_A 154 NVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHV 233 (412)
T ss_dssp EESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTS
T ss_pred EeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeE
Confidence 6999999999999999999876544433332222110 00 00 0000011111 11111 1
Q ss_pred EEecCCCe--EEEEEEecC----CCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCc-cCCCCCCCC
Q 010623 268 FYPISSNE--VRCLVDIPG----QKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRS-MPAAPYPTP 340 (506)
Q Consensus 268 ~~p~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 340 (506)
.++..... ..|.+.... +...++..+...+.+.+.+. .+.+.+.+.+ ...+...+..+.... ....+|..|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~li-~~~~~~~~~~~~~~~~~~~~~~~~g 311 (412)
T 4hb9_A 234 EASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPSLHTLV-QQSDMENISPLHLRSMPHLLPWKSS 311 (412)
T ss_dssp CGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHHHHHHH-HTSCTTCCEEEEEEECCCCCCCCCC
T ss_pred EEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChHHHHHH-Hhcccceeccchhcccccccccccc
Confidence 11111111 122222221 12223455666666766543 3455555443 233333444443332 245689999
Q ss_pred cEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 010623 341 GALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQ 413 (506)
Q Consensus 341 rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~ 413 (506)
||+|+|||||.|+|++|||+|+||+||.+|+|+|+.+.. ...+++++|++||++|+|++..++..|....+
T Consensus 312 rv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~--~~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 312 TVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVAS--GHEELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp SEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997643 22345789999999999999999988876544
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2.4e-40 Score=335.18 Aligned_cols=375 Identities=19% Similarity=0.204 Sum_probs=249.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC--CCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE--PDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~--~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
++||+||||||+|+++|+.|+++|++|+|+||.+.. ....++..+++++++.|+++|+++.+.+.. .+..++.++..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~-~~~~~~~~~~~ 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG-LVHEGVEIAFA 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC-EEESCEEEEET
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC-CccceEEEEEC
Confidence 589999999999999999999999999999998642 123344568999999999999998887633 34455566555
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
+......++ .......++.+++..+.+.|.+.+.+. ++++++++ |+++.+++++...|++. .+|++.+++||+||
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~~~-~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 81 GQRRRIDLK--RLSGGKTVTVYGQTEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGERPYVTFE-RDGERLRLDCDYIA 156 (394)
T ss_dssp TEEEEECHH--HHHTSCCEEECCHHHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSSSCEEEEE-ETTEEEEEECSEEE
T ss_pred CceEEeccc--cccCCCceEEechHHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCCceEEEEe-cCCcEEEEEeCEEE
Confidence 543322221 111122345678889999999998887 78888884 99998764322224442 47775568899999
Q ss_pred eecCCcccchhhccCCCCCCccce--eeEEEeccCCCC-CCeeEEEecCCCcEEEEecCCCeEEEEEEecCCC-CCCCCc
Q 010623 217 VCDGCFSNLRRSLCNPKVDVPSCF--VGLVLENCNLPF-ENHGHVVLADPSPILFYPISSNEVRCLVDIPGQK-VPSISN 292 (506)
Q Consensus 217 ~AdG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~ 292 (506)
+|||.+|.+|++++.......... .++.......+. .....+...++++.++.|..++..+|++..+... ...++.
T Consensus 157 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T 1k0i_A 157 GCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWSD 236 (394)
T ss_dssp ECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCCH
T ss_pred ECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccCH
Confidence 999999999999875421110011 111111112221 1122222344556666666667777777665432 223444
Q ss_pred hHHHHHHHHhcCCCCChhhhHHHHhhhcCC---CeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHH
Q 010623 293 GEMANYLKTVVAPQIPREIFHSFVAAVDGG---NIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVI 369 (506)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~ 369 (506)
++..+.+.+.+ ..... ..+... ....++.......+|..|||+|+|||||.++|++|||+|+||+||.+
T Consensus 237 ~~~~~~l~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~ 308 (394)
T 1k0i_A 237 ERFWTELKARL----PSEVA----EKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVST 308 (394)
T ss_dssp HHHHHHHHHTS----CHHHH----HHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhh----Ccccc----cccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHH
Confidence 44444444432 22111 011111 11234444445677889999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHhcCCCCchhHHHh
Q 010623 370 LRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS--PDEARKEMRQACFDYLSLGGIFSSGPVSL 447 (506)
Q Consensus 370 La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~r~~~~~~~~~g~~~~~~~~~~ 447 (506)
|+++|...... ..+++|+.|+++|++++..++..+..+..++... .++....+|+..+..+...+...+..+..
T Consensus 309 La~~L~~~~~~----~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~ 384 (394)
T 1k0i_A 309 LYRLLLKAYRE----GRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAEN 384 (394)
T ss_dssp HHHHHHHHHHH----CCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhcc----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 99999865311 1247899999999999999998888877777643 25778889999888877665555555555
Q ss_pred hcCC
Q 010623 448 LSGL 451 (506)
Q Consensus 448 ~~~~ 451 (506)
++|+
T Consensus 385 ~~g~ 388 (394)
T 1k0i_A 385 YVGL 388 (394)
T ss_dssp HSCC
T ss_pred hcCC
Confidence 5554
No 12
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=1.1e-38 Score=324.50 Aligned_cols=361 Identities=19% Similarity=0.212 Sum_probs=222.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCc-EEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRR-VHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~-v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
.++||+||||||+||++|+.|+++|++ |+|+||.+......++..+++++++.|+++|+++.+..... +...+.++..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~-~~~~~~~~~~ 81 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI-PTHELRYIDQ 81 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEECT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC-CcceEEEEcC
Confidence 468999999999999999999999999 99999998766667778899999999999999988876432 3333444433
Q ss_pred CceeeeecCCcC-CCCCcccccccchHHHHHHHHHHHcC-CCEEEEec-eEEEEEeeCCeEEEEEEEe-CCccEEEEEcC
Q 010623 138 GNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASL-PNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAP 213 (506)
Q Consensus 138 ~~~~~~~~~~~~-~~~~~~~~~i~~~~l~~~L~~~~~~~-~~v~i~~~-~v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~ 213 (506)
........+... .......+.++|..|.+.|.+.+.+. +.++++++ +|+++.+ ++++. +++.+ .+|++.+++||
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~ad 159 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGAD 159 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEES
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCCceEEecC
Confidence 222111111100 01112245789999999999998763 45567777 4999988 55443 44433 24755568899
Q ss_pred eEEeecCCcccchhhccCCCCCCccceeeEEEe----ccCCCCCCeeEEEecC--CCcEEEEecCC-----C--eEEEEE
Q 010623 214 LTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLE----NCNLPFENHGHVVLAD--PSPILFYPISS-----N--EVRCLV 280 (506)
Q Consensus 214 ~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~p~~~-----~--~~~~~~ 280 (506)
+||+|||.+|.+|++++..... ..+.+.... ...........++++. ++.++++|+++ + ...|.+
T Consensus 160 ~vV~AdG~~S~vR~~l~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~ 237 (410)
T 3c96_A 160 VLVGADGIHSAVRAHLHPDQRP--LSHGGITMWRGVTEFDRFLDGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVC 237 (410)
T ss_dssp EEEECCCTTCHHHHHHCTTCCC--CEEEEEEEEEEEEEESCCTTSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEE
T ss_pred EEEECCCccchhHHHhcCCCCC--CCcCCeeEEEeecccccccCCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEEEE
Confidence 9999999999999999754321 122222211 1111112233444543 56888999863 3 244544
Q ss_pred EecCC------CCCCCCc-hHHHHHHHHhcCCCCCh--hhhHHHHhhhcCCCeEEecCCcc-CCCCCCCCcEEEEccCCC
Q 010623 281 DIPGQ------KVPSISN-GEMANYLKTVVAPQIPR--EIFHSFVAAVDGGNIKTMPNRSM-PAAPYPTPGALLMGDAFN 350 (506)
Q Consensus 281 ~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rv~LvGDAAh 350 (506)
..+.. ....+.. ....+++. .+.....+ .+.+.+.. ...+..+++... ..++|..|||+|+|||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh 313 (410)
T 3c96_A 238 MVPSAAVGQLDNEADWNRDGRLEDVLP-FFADWDLGWFDIRDLLTR---NQLILQYPMVDRDPLPHWGRGRITLLGDAAH 313 (410)
T ss_dssp EEEHHHHCCCCSSCCTTCBCCHHHHHH-HHTTCCBTTBCHHHHHHT---CSEEEEEEEEECCCCSCCCBTTEEECTHHHH
T ss_pred EecCcccccCCCccccCCCCCHHHHHH-HhcCCCCchhHHHHHHhc---CcccceeecccCCCccccccCCEEEEecccC
Confidence 43211 1112221 12222222 22221111 12222211 123445554432 357899999999999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHH-HHHHH--HcCCC-chhHHHH
Q 010623 351 MRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAG-ALYQV--FSASP-DEARKEM 426 (506)
Q Consensus 351 ~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~-~~~~~--~~~~~-~~~~~~~ 426 (506)
.++|++|||+|+||+||.+|+++|... .+.+++|++|+++|++++..++..++ ....+ +.... +....++
T Consensus 314 ~~~P~~GqG~n~ai~Da~~La~~L~~~------~~~~~~L~~Ye~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 387 (410)
T 3c96_A 314 LMYPMGANGASQAILDGIELAAALARN------ADVAAALREYEEARRPTANKIILANREREKEEWAAASRPKTEKSAAL 387 (410)
T ss_dssp CCCSSTTCTHHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred CCCCccchhHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhccCCCCHHHH
Confidence 999999999999999999999999863 13578999999999999999887776 33343 22121 2334455
Q ss_pred HHHHHHHH
Q 010623 427 RQACFDYL 434 (506)
Q Consensus 427 r~~~~~~~ 434 (506)
++.+.++.
T Consensus 388 ~~~~~~~~ 395 (410)
T 3c96_A 388 EAITGSYR 395 (410)
T ss_dssp --------
T ss_pred HHHHHHhh
Confidence 55555443
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=9.6e-38 Score=316.28 Aligned_cols=326 Identities=19% Similarity=0.132 Sum_probs=221.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC-CCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC-
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE-PDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD- 137 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~-~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~- 137 (506)
++||+||||||+||++|+.|+++|++|+|+||.+.. .....+..+++++++.|+++|+.+ .. ...+.....++..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~-~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DS-ISVPSSSMEYVDAL 81 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GG-TCBCCCEEEEEETT
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--cc-ccccccceEEEecC
Confidence 589999999999999999999999999999998764 334556678999999999999987 22 1223334444443
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
........+. ....+++..+.+.|.+.+ +++++++++ |+++.+++++ ++++..+|+ +++||+||
T Consensus 82 ~g~~~~~~~~-------~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~---v~v~~~~g~--~~~ad~vV 146 (397)
T 2vou_A 82 TGERVGSVPA-------DWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSET---VQMRFSDGT--KAEANWVI 146 (397)
T ss_dssp TCCEEEEEEC-------CCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSC---EEEEETTSC--EEEESEEE
T ss_pred CCCccccccC-------cccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCE---EEEEECCCC--EEECCEEE
Confidence 2221111111 012356778888998876 367788875 9999988774 456677886 46799999
Q ss_pred eecCCcccchhhccCCCCCCccceeeEEEe-----ccCCCCC------CeeEEEecCCCcEEEEecCCC------eEEEE
Q 010623 217 VCDGCFSNLRRSLCNPKVDVPSCFVGLVLE-----NCNLPFE------NHGHVVLADPSPILFYPISSN------EVRCL 279 (506)
Q Consensus 217 ~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~p~~~~------~~~~~ 279 (506)
+|||.+|.+|++++ +.. ..+.+.... ....+.. ....+++++++.+.++|++++ ...|.
T Consensus 147 ~AdG~~S~vr~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (397)
T 2vou_A 147 GADGGASVVRKRLL-GIE---PTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQ 222 (397)
T ss_dssp ECCCTTCHHHHHHH-CCC---CEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEE
T ss_pred ECCCcchhHHHHhc-cCC---CCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEE
Confidence 99999999999998 532 122222111 1122211 123445566677888888754 45566
Q ss_pred EEecCCCCC---CC-----------------CchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCC
Q 010623 280 VDIPGQKVP---SI-----------------SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPT 339 (506)
Q Consensus 280 ~~~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (506)
+..+....+ .. ..++..+.+.+.+.+.+++ +.+.+... .....+++....+.+|..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~ 298 (397)
T 2vou_A 223 WYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNA---SSPFVTVVADATVDRMVH 298 (397)
T ss_dssp EEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHC---SSCEEEEEEEBCCSCSEE
T ss_pred EEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhcc---CCcceeeeeeecCCceec
Confidence 655432100 00 0122222222223334444 43333221 123355655556788999
Q ss_pred CcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcC
Q 010623 340 PGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSA 417 (506)
Q Consensus 340 ~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~ 417 (506)
|||+|+|||||.++|++|||+|+||+||..|++.|... .+.+++|++|+++|++++..++..+..+.+++..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~ 370 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQH 370 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999752 2346899999999999999999999988888875
No 14
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=1.1e-36 Score=308.57 Aligned_cols=337 Identities=15% Similarity=0.165 Sum_probs=220.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccc--ccc-chHHHHHHhCchhHHhhcccceecceEE
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGEL--LQP-GGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~--l~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 134 (506)
++++||+||||||+||++|+.|+++|++|+|+||.+....+..|.. +++ ++.+.|+++|+++.+....... .. .+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-~~-~~ 101 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPM-GV-NI 101 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCC-CE-EE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhccc-ce-EE
Confidence 4568999999999999999999999999999999876554444433 333 5689999999998887643222 22 33
Q ss_pred EECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcC
Q 010623 135 FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAP 213 (506)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~ 213 (506)
+............... .......++|..|.+.|.+.+.+ +.++++ +|+++++++++ ++++..+|++ ++||
T Consensus 102 ~~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~ad 172 (398)
T 2xdo_A 102 ADEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEPGKKK---WTLTFENKPS--ETAD 172 (398)
T ss_dssp ECSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEECSSS---EEEEETTSCC--EEES
T ss_pred ECCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEECCCE---EEEEECCCcE--EecC
Confidence 3332222222200000 01122357899999999987753 345666 59999887764 4566778863 6799
Q ss_pred eEEeecCCcccchhhccCCCCCCccceeeEEEe-----ccCC--CC-----CCeeEEEecCCCcEEEEecCCCeEEEEEE
Q 010623 214 LTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLE-----NCNL--PF-----ENHGHVVLADPSPILFYPISSNEVRCLVD 281 (506)
Q Consensus 214 ~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~-----~~~~--~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 281 (506)
+||+|||.+|.+|++++...+ .+.+.... .... +. +....++++++..++.+|..++..++++.
T Consensus 173 ~vV~AdG~~S~vR~~l~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 248 (398)
T 2xdo_A 173 LVILANGGMSKVRKFVTDTEV----EETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGIS 248 (398)
T ss_dssp EEEECSCTTCSCCTTTCCCCC----EEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEECCCcchhHHhhccCCCc----eEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEE
Confidence 999999999999999864322 12222111 0000 10 11122345566667778998887777776
Q ss_pred ecCC-CC------CCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccC-CCCCCC-C--cEEEEccCCC
Q 010623 282 IPGQ-KV------PSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMP-AAPYPT-P--GALLMGDAFN 350 (506)
Q Consensus 282 ~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~--rv~LvGDAAh 350 (506)
+... .. ...+.++..+.+.+.+. .+.+.+.+.+.. ...+..++....+ ..+|.. + ||+|+|||||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh 324 (398)
T 2xdo_A 249 FKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDERYKELIHT---TLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAH 324 (398)
T ss_dssp EECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHHHHHHHHH---CSCCEEEEEEECCCCSCCCSCCSSCEEECTHHHH
T ss_pred EecCcccccccccCcCCHHHHHHHHHHHHc-CCChHHHHHHhC---cccceeeeeEeccCCCCcccCCCccEEEEeehhc
Confidence 5422 11 11234455555655443 344555544433 1233333333322 246754 5 9999999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHH-HHHHHHHHHHHhcchhHHHHHHHHHHHH-HHcCC
Q 010623 351 MRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPA-LCNYLESFYTLRKPVASTINTLAGALYQ-VFSAS 418 (506)
Q Consensus 351 ~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~-~~~~L~~Y~~~R~~~~~~~~~~s~~~~~-~~~~~ 418 (506)
.++|++|||+|+||+||.+|+++|.... .+ .+++|++|+++|++++..++..+..+.. ++...
T Consensus 325 ~~~P~~GqG~n~ai~Da~~La~~L~~~~-----~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~ 389 (398)
T 2xdo_A 325 LMPPFAGQGVNSGLVDALILSDNLADGK-----FNSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPD 389 (398)
T ss_dssp CCCCTTSCSHHHHHHHHHHHHHHHHSCC-----SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred cCCCccCccHHHHHHHHHHHHHHHHhcc-----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998641 12 5789999999999999999887776654 45443
No 15
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=2.7e-37 Score=311.13 Aligned_cols=322 Identities=19% Similarity=0.155 Sum_probs=222.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.+||+||||||+|+++|+.|+++|++|+|+||.+......++..+++++.+.|+++|+++.+.... .....+.++..+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~g~ 89 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGS-HTPPTYETWMHNK 89 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTC-BCCSCEEEEETTE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhC-CCccceEEEeCCc
Confidence 589999999999999999999999999999999877666778889999999999999998887643 3444555555522
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....++.. ....+.++|..+.+.|.+.+.+. ++++++++ |++++. ++ .++..+|+ +++||+||+|
T Consensus 90 -~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~-~~-----~v~~~~g~--~~~ad~vV~A 155 (379)
T 3alj_A 90 -SVSKETFN----GLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAADP-VG-----RLTLQTGE--VLEADLIVGA 155 (379)
T ss_dssp -EEEEECGG----GCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEEET-TT-----EEEETTSC--EEECSEEEEC
T ss_pred -eeeeccCC----CCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEe-CC-----EEEECCCC--EEEcCEEEEC
Confidence 22222211 11246789999999999999987 78998885 999987 33 23456776 4679999999
Q ss_pred cCCcccchhhccCCCCCCccceeeEEEe-cc-----CCCCCC-eeEE--EecCCCcEEEEecCCCeEEEEEEecCCCCCC
Q 010623 219 DGCFSNLRRSLCNPKVDVPSCFVGLVLE-NC-----NLPFEN-HGHV--VLADPSPILFYPISSNEVRCLVDIPGQKVPS 289 (506)
Q Consensus 219 dG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~-----~~~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 289 (506)
||.+|.+|+.++.........+..+... .. ....+. .... +++++++++++|++++..+|++..+... +.
T Consensus 156 dG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~ 234 (379)
T 3alj_A 156 DGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAAD-PR 234 (379)
T ss_dssp CCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTC-TT
T ss_pred CCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCC-CC
Confidence 9999999999986321111111111111 11 112122 2222 5677789999999999888887765421 11
Q ss_pred CCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCc-cCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHH
Q 010623 290 ISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRS-MPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 368 (506)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~ 368 (506)
++++.+.+..+.. .++ .+.+.+.. .+...+..++... ....+|..|||+|+|||||.++|++|||+|+||+||.
T Consensus 235 --~~~l~~~~~~~~~-~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~ 309 (379)
T 3alj_A 235 --GSSVPIDLEVWVE-MFP-FLEPCLIE-AAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAF 309 (379)
T ss_dssp --TTCSSCCHHHHHH-HCG-GGHHHHHH-HHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHH
T ss_pred --HHHHHHHHhcCCc-hhc-cHHHHHhh-CCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHH
Confidence 1111112221100 011 01122211 1112333344333 2357888899999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHH
Q 010623 369 ILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLA 408 (506)
Q Consensus 369 ~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s 408 (506)
+|+++|... .+.+++|+.|+++|++++..++..+
T Consensus 310 ~La~~L~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 310 SLSQDLEEG------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHTTSS------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999853 1346899999999999999988776
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.1e-36 Score=316.00 Aligned_cols=352 Identities=18% Similarity=0.179 Sum_probs=238.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHH-HHHHhCchhHHhhcccceecceEEEECC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYL-KLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~-~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
++||+|||||++|+++|+.|+++|++|+|+||.+.+. ...|..+.++... .++.+|+++.+............+....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC-CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 5899999999999999999999999999999986433 3345566676554 8899999988776543332222222221
Q ss_pred ce--eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeE
Q 010623 139 NR--TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 139 ~~--~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
.. ....+..........++.+++..+.+.|.+.+.+. +++++.+ +|+++..+++++.+|++.+.+|+..+++||+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEE
Confidence 11 11222222222334567899999999999999886 7888888 59999999998888998888897667899999
Q ss_pred EeecCCcccchhhccCCCCCCccceeeEEE--e-ccCCCC--CCeeEEEecCCCcEEEEecCCCeEEEEEEecCCCCCCC
Q 010623 216 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVL--E-NCNLPF--ENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (506)
Q Consensus 216 V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~--~-~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (506)
|+|||.+|.+|++++...........++.. . ....+. .......+.++++++++|++++...+.+.++.+.....
T Consensus 165 I~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~ 244 (512)
T 3e1t_A 165 VDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAI 244 (512)
T ss_dssp EECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTTT
T ss_pred EECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhhh
Confidence 999999999999996533222222222221 1 112222 22334455677899999999988777776653321111
Q ss_pred CchHHHHHHHHhcCCCCChhhhHHHHhhhc-----CCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHH
Q 010623 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVD-----GGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALS 365 (506)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~ 365 (506)
.. ...+.+.+.+. ..+.+.+.+..... ...+...+.......+|..+||+|+|||||.++|++|||+|+|++
T Consensus 245 ~~-~~~~~~~~~l~--~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~ 321 (512)
T 3e1t_A 245 KD-GHEAALLRYID--RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATY 321 (512)
T ss_dssp SS-CHHHHHHHHHH--TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHH
T ss_pred cC-CHHHHHHHHHH--hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHH
Confidence 11 11222222211 11223322222111 112222222222456788899999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCC
Q 010623 366 DIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS 418 (506)
Q Consensus 366 Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~ 418 (506)
||..|++.|..... .+.+.+.+|+.|+++|+++...+..+...++.+....
T Consensus 322 dA~~La~~L~~~l~--~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~ 372 (512)
T 3e1t_A 322 SALLVARAINTCLA--GEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQDT 372 (512)
T ss_dssp HHHHHHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999987643 2234568999999999999999988888777775443
No 17
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=9.2e-37 Score=321.44 Aligned_cols=366 Identities=16% Similarity=0.170 Sum_probs=240.3
Q ss_pred ccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecc
Q 010623 52 ALNGECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG 131 (506)
Q Consensus 52 ~~~~~~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 131 (506)
.++..+++++||+||||||+|+++|+.|+++|++|+|+|+.+.+. ...|..+.+.+.+.++.+|+++.+.........+
T Consensus 15 ~~~~~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~-~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 15 VPRGSHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR-YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPS 93 (591)
T ss_dssp -----CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC-CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECE
T ss_pred CCCcCcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC-CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCC
Confidence 334444557999999999999999999999999999999986543 3457789999999999999998877654333333
Q ss_pred eEEEECCce--eeeecCCcCC--CCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCcc
Q 010623 132 YALFKDGNR--TQISYPLEKF--HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGE 206 (506)
Q Consensus 132 ~~~~~~~~~--~~~~~~~~~~--~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~ 206 (506)
..+...... ....+..... ...+.++.+++..+...|.+.+.+. |++++.+ +|+++..+++.+.+|++.+ +|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~ 171 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDPDRVVLTVRR-GGE 171 (591)
T ss_dssp EEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEECCSTTCEEEEEEE-TTE
T ss_pred cEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCEEEEEEec-CCc
Confidence 332222111 1112211111 0223456789999999999999886 7889888 5999987755555566543 675
Q ss_pred EEEEEcCeEEeecCCcccchhhccCCCCCCccceeeEEE--ec-cCC--CCCCeeEEEecCCCcEEEEecCCCeEEEEEE
Q 010623 207 ELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVL--EN-CNL--PFENHGHVVLADPSPILFYPISSNEVRCLVD 281 (506)
Q Consensus 207 ~~~i~a~~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 281 (506)
..+++||+||+|||.+|.+|+.++...........++.. .. ... +........+.+.+++|.+|++++..++.+.
T Consensus 172 ~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~ 251 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLV 251 (591)
T ss_dssp EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEE
T ss_pred eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEE
Confidence 567899999999999999999998753322111122211 11 112 2223445556678899999999987777776
Q ss_pred ecCCCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhH
Q 010623 282 IPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMT 361 (506)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n 361 (506)
.+.+..+........+++.+... .. +.+.+.+...........++.......+|..+|++++|||||.++|+.|||+|
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~l~~-~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGin 329 (591)
T 3i3l_A 252 VDRSKSAEVREQGADAFYSSTLA-KC-AKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVH 329 (591)
T ss_dssp EEGGGHHHHHHHCHHHHHHHHHT-TC-HHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHH
T ss_pred cCHHHHhhhccCCHHHHHHHHHH-hC-HHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccccCCCcccccHH
Confidence 65432111111112233333221 12 23333332222122222233233345678889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHH--HHHcCCCchhHH
Q 010623 362 VALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALY--QVFSASPDEARK 424 (506)
Q Consensus 362 ~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~--~~~~~~~~~~~~ 424 (506)
+|++||..|++.|..... ++...+.+++.|+++|++....+..+....+ ........+.+.
T Consensus 330 lAl~dA~~LA~~L~~~l~--~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~FW~ 392 (591)
T 3i3l_A 330 LASQSAVSAAAAIDRITR--HGDEKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFWR 392 (591)
T ss_dssp HHHHHHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHH
Confidence 999999999999986532 2344567999999999999999998888877 444443344443
No 18
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.1e-36 Score=303.81 Aligned_cols=338 Identities=20% Similarity=0.199 Sum_probs=218.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC-cccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD-RIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~-~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+|||+||||||+||++|+.|+++|++|+|+||++.... ..+|..+.++ .++++++....... .....+..++...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~---~l~~l~~~~~~~~~-~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKG---ILNEADIKADRSFI-ANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETH---HHHHTTCCCCTTTE-EEEESEEEEECTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHH---HHHHcCCCchhhhh-hcccceEEEEeCC
Confidence 59999999999999999999999999999999876543 3456667654 56677776433222 2234455555443
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
.......... ......++.++|..+.+.|.+.+.+. |++++.++ |+++..+++++.++.... +|+..+++||+||+
T Consensus 80 ~~~~~~~~~~-~~~~~~~~~i~R~~~~~~L~~~a~~~-G~~~~~~~~v~~~~~~~~~~~~v~~~~-~~~~~~~~a~~vIg 156 (397)
T 3oz2_A 80 EKRPIILQSE-KAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRH-NNEIVDVRAKMVIA 156 (397)
T ss_dssp CSSCEEEECS-SSSCCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEE-TTEEEEEEEEEEEE
T ss_pred CceEeecccc-ccCCceeEEEEHHHHHHHHHHHHHhc-CcEEeeeeeeeeeeeccceeeeeeecc-cccceEEEEeEEEe
Confidence 3222222211 12234567899999999999999987 77888775 999999999887666543 55556789999999
Q ss_pred ecCCcccchhhccCCCCCCccceeeE--EEeccC-CCCCCeeEEEec---CCCcEEEEecCCCeEEEEEEecCCCCCCCC
Q 010623 218 CDGCFSNLRRSLCNPKVDVPSCFVGL--VLENCN-LPFENHGHVVLA---DPSPILFYPISSNEVRCLVDIPGQKVPSIS 291 (506)
Q Consensus 218 AdG~~S~vR~~l~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 291 (506)
|||.+|.+|++++............. ...... ...++...++++ ++++.|++|..++..++.+....+... .
T Consensus 157 AdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~--~ 234 (397)
T 3oz2_A 157 ADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIH--N 234 (397)
T ss_dssp CCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTSC--S
T ss_pred CCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchhh--h
Confidence 99999999999987543332222111 111111 122344455544 456789999999877776655433221 2
Q ss_pred chHHHHHHHHhcCCCCChhhhHHHHhhhcCCCe-EEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHH
Q 010623 292 NGEMANYLKTVVAPQIPREIFHSFVAAVDGGNI-KTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIL 370 (506)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~L 370 (506)
..+..+.+.+++.. . +.+. ........ ...+. .....++..+|++|+|||||.++|++|||+|+||+||..|
T Consensus 235 ~~~~~~~l~~~~~~-~-~~l~----~~~~~~~~~~~~~~-~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~ 307 (397)
T 3oz2_A 235 RFELKNYLDRFIEN-H-PGLK----KGQDIQLVTGGVSV-SKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp HHHHHHHHHHHHHT-C-HHHH----TSEEEEEEEEEEEC-CCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHh-C-cccc----ccceeeeeeccccc-cCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHH
Confidence 33444444443221 1 1111 11000011 11122 2234567789999999999999999999999999999999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 010623 371 RNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVF 415 (506)
Q Consensus 371 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~ 415 (506)
|+.|.+....+ +..++.|+.|++.++++............+.+
T Consensus 308 A~~i~~~l~~~--~~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 308 AQVTKEAIESN--DYSPQMMQKYEKLIKERFERKHLRNWVAKEKL 350 (397)
T ss_dssp HHHHHHHHHHT--CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998653211 22357899999998887655443333333333
No 19
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.8e-36 Score=312.12 Aligned_cols=341 Identities=17% Similarity=0.208 Sum_probs=226.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC--CcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP--DRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~--~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
+++||+||||||+|+++|+.|+++|++|+|+||.+.+. ...++..+ +.+.++++|+.+...........+..++.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 35899999999999999999999999999999986532 23344434 56788899887533221112233334443
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccEEEEEcCe
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPL 214 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~ 214 (506)
........+ ...++.++|..+.+.|.+.+.+. +++++.++ |+++..+++++.+|++.+. +|+..+++||+
T Consensus 82 ~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 82 PDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDR-GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp TTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred CCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 222111111 12356789999999999999886 78898885 9999998888877887765 78766789999
Q ss_pred EEeecCCcccchhhccCCCCC----Cc-cceeeE---EEeccCCCCCCeeEEEec----CCCcEEEEecCCCeEEEEEEe
Q 010623 215 TIVCDGCFSNLRRSLCNPKVD----VP-SCFVGL---VLENCNLPFENHGHVVLA----DPSPILFYPISSNEVRCLVDI 282 (506)
Q Consensus 215 vV~AdG~~S~vR~~l~~~~~~----~~-~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~ 282 (506)
||+|||.+|.+|+.++...+. .. ....++ +........+....++++ +++++|++|.+++..++.+..
T Consensus 154 VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~ 233 (453)
T 3atr_A 154 VVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGI 233 (453)
T ss_dssp EEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEE
T ss_pred EEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEe
Confidence 999999999999999865421 11 111222 111112222334445553 567899999999887777766
Q ss_pred cCCCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHH
Q 010623 283 PGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTV 362 (506)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ 362 (506)
+....+....+.+.+++.+. .+.+... ..... .-...+. .....+|..+|++|+|||||.++|++|||+|+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~------~~~~~-~~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~ 304 (453)
T 3atr_A 234 QGGMGYPSIHEYYKKYLDKY-APDVDKS------KLLVK-GGALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGS 304 (453)
T ss_dssp ESSSCCCCHHHHHHHHHHHH-CTTEEEE------EEEEE-EEEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-hhhcCCC------eEEec-cceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHH
Confidence 53321111223333444331 2222110 00000 0011232 34567788899999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCch
Q 010623 363 ALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDE 421 (506)
Q Consensus 363 ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~ 421 (506)
||+||..|++.|......++ ..+++|+.|+++|++++...+..+..+.+++..-.++
T Consensus 305 Ai~da~~la~~l~~~l~~~~--~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 361 (453)
T 3atr_A 305 AMISGYCAAKAILSAFETGD--FSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSND 361 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHTC--CSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999986421111 1246899999999999999988888777776543244
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.3e-34 Score=293.89 Aligned_cols=335 Identities=19% Similarity=0.150 Sum_probs=230.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+|||||++|+++|+.|+++|++|+|+||.+.+. ...|..+.+++.+.++++|+++.+.........+..+...+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 4899999999999999999999999999999986443 356788999999999999999888776554445555544444
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.....+...........+.++|..+.+.|.+.+.+. |++++.+ +|+++..+++++. +.+.+.+|+..+++||+||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~-v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSV-TTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEE-EEEEETTSCEEEEEEEEEEEC
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCCCEEEEEcCEEEEC
Confidence 434444322222234567899999999999999887 7888888 4999998877654 677788898777899999999
Q ss_pred cCCcccchhhccCCCCCCccceeeEEEe-ccCCCC----CCeeEEEec---CCCcEEEEecCCCeEEEEEEecCCCCCCC
Q 010623 219 DGCFSNLRRSLCNPKVDVPSCFVGLVLE-NCNLPF----ENHGHVVLA---DPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (506)
Q Consensus 219 dG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (506)
||.+|.+|+.++.+.+........+... ....+. .+...+++. +.++.|++|.+++...+.+..+.+.....
T Consensus 162 ~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~ 241 (421)
T 3nix_A 162 SGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEY 241 (421)
T ss_dssp CGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHHTTS
T ss_pred CCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhc
Confidence 9999999999987544332222222211 111111 122223322 56688999999998777776653321111
Q ss_pred CchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHH
Q 010623 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIL 370 (506)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~L 370 (506)
.....+.+.+... .. +.+.+.+........+..++.......++..+|++++|||||.++|++|||+|+|++||..|
T Consensus 242 -~~~~~~~l~~~~~-~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~l 318 (421)
T 3nix_A 242 -TGTPEERMRAMIA-NE-GHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKG 318 (421)
T ss_dssp -CSCHHHHHHHHHH-TC-TTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHH-hC-cHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHH
Confidence 1122233333221 11 12232222222222445555555556778889999999999999999999999999999999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHH
Q 010623 371 RNLLRHLSNLNDAPALCNYLESFYTLRKPVASTI 404 (506)
Q Consensus 371 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~ 404 (506)
++.|.+....... +.++.|+++++......
T Consensus 319 a~~l~~~~~~~~~----~~~~~y~~~~~~~~~~~ 348 (421)
T 3nix_A 319 GKLAVQFLKGEEV----NWEKDFVEHMMQGIDTF 348 (421)
T ss_dssp HHHHHHHHTTCCC----CHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCch----hHHHHHHHHHHHHHHHH
Confidence 9999875432221 36777888887655444
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=3.6e-34 Score=290.00 Aligned_cols=341 Identities=19% Similarity=0.190 Sum_probs=228.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC-cccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD-RIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~-~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
++||+||||||+|+++|+.|+++|++|+|+||++.... ..++..+. .+.++++|+++.... ......+..++...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSF-IANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTT-EEEEESEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHH-hhhhcceEEEEcCC
Confidence 58999999999999999999999999999999875433 33343333 367888898654222 22344455555433
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
......++.... ..+.++.+++..+.+.|.+.+.+. |++++.+ +|+++..+++++.+|++... ++..+++||+||+
T Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~-~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 80 EKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRHN-NEIVDVRAKMVIA 156 (397)
T ss_dssp CSSCEEEC------CCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred CCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhC-CCEEEECCEEEEEEEeCCEEEEEEEEEC-CeEEEEEcCEEEE
Confidence 221122221111 134567899999999999999886 7888887 49999999888877777553 2334688999999
Q ss_pred ecCCcccchhhccCCC-CCCcc-ceeeEEE--eccCCCCCCeeEEEe---cCCCcEEEEecCCCeEEEEEEecCCCCCCC
Q 010623 218 CDGCFSNLRRSLCNPK-VDVPS-CFVGLVL--ENCNLPFENHGHVVL---ADPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (506)
Q Consensus 218 AdG~~S~vR~~l~~~~-~~~~~-~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (506)
|||.+|.+|+.++.+. ..... ...++.. .....+ ++...+++ .+.++.|++|.+++..++.+..+.... .
T Consensus 157 A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--~ 233 (397)
T 3cgv_A 157 ADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD-PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--H 233 (397)
T ss_dssp CCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC-TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC--S
T ss_pred CCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC-CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc--c
Confidence 9999999999998765 32221 1222221 122222 34445554 356789999999998777777654422 1
Q ss_pred CchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHH
Q 010623 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIL 370 (506)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~L 370 (506)
...+..+.+++++... +.+.. ..........+|+. ....+|..+|++++|||||.++|++|||+|+|++||..|
T Consensus 234 ~~~~~~~~l~~~~~~~--~~~~~---~~~~~~~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~l 307 (397)
T 3cgv_A 234 NRFELKNYLDRFIENH--PGLKK---GQDIQLVTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp CHHHHHHHHHHHHHTC--HHHHT---SEEEEEEEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC--cCCCC---CeEEeeeeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHH
Confidence 2234444454433211 11110 00001112334443 346778889999999999999999999999999999999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCC
Q 010623 371 RNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS 418 (506)
Q Consensus 371 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~ 418 (506)
++.|.+.... +...++.|+.|+++|++.....+..+..+.+++...
T Consensus 308 a~~l~~~~~~--~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 3cgv_A 308 AQVTKEAIES--NDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAML 353 (397)
T ss_dssp HHHHHHHHHH--TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999865311 112357899999999999888888888777777554
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=4.6e-32 Score=284.15 Aligned_cols=333 Identities=16% Similarity=0.130 Sum_probs=217.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHH------------CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhH--Hhhcc
Q 010623 60 DADVIVVGAGVAGAALANTLAK------------DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDC--VEQID 125 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~------------~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~--~~~~~ 125 (506)
.+||+||||||+|+++|+.|++ .|++|+|+|+.+.+. ...|+.+.+++.+.|+++|+.+. +....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~ 85 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFIRQCD 85 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHHHHcC
Confidence 5799999999999999999999 999999999975443 33478899999999999999986 55433
Q ss_pred cceecceEEEE--C------CceeeeecC---------C-----------------------------------cCC-CC
Q 010623 126 AQRVFGYALFK--D------GNRTQISYP---------L-----------------------------------EKF-HS 152 (506)
Q Consensus 126 ~~~~~~~~~~~--~------~~~~~~~~~---------~-----------------------------------~~~-~~ 152 (506)
.....++.+.. . +......+. + ..+ ..
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~ 165 (526)
T 2pyx_A 86 ASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQ 165 (526)
T ss_dssp CEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCS
T ss_pred CEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCC
Confidence 32222322211 1 000000000 0 000 11
Q ss_pred CcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccc-hhhccC
Q 010623 153 DVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL-RRSLCN 231 (506)
Q Consensus 153 ~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~v-R~~l~~ 231 (506)
...++.+++..+.+.|.+.+.+..|++++.++|+++..++++.. +.+...+|++ ++||+||+|||.+|.+ |+.++.
T Consensus 166 ~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~-~~v~~~~g~~--i~ad~vV~AdG~~S~~~~~~lg~ 242 (526)
T 2pyx_A 166 NNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDI-EKLITKQNGE--ISGQLFIDCTGAKSLLLGEHLQV 242 (526)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCE-EEEEESSSCE--EECSEEEECSGGGCCCCCCCTCC
T ss_pred CCeeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcE-EEEEECCCCE--EEcCEEEECCCcchHHHHHHhCC
Confidence 22346789999999999999982378888889999987654321 3344567663 7799999999999999 677776
Q ss_pred CCCCCc---cceeeEEEe-ccC---CCCCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCCCCCCCchHHHHHHHHhcC
Q 010623 232 PKVDVP---SCFVGLVLE-NCN---LPFENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVA 304 (506)
Q Consensus 232 ~~~~~~---~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (506)
+..... ....++... ... .+..........+.++++.+|+.++. .+.+.+.... .+.++..+.+++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~~---~~~~~~~~~l~~~l~ 318 (526)
T 2pyx_A 243 PFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSSH---TNDIDAQKTLFNYLG 318 (526)
T ss_dssp CEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTTT---CCHHHHHHHHHHHHT
T ss_pred CcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCCC---CChHHHHHHHHHHHH
Confidence 442211 111222221 111 11122223334567788999998753 3333332221 233455555655543
Q ss_pred CCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChH
Q 010623 305 PQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAP 384 (506)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~ 384 (506)
.. .+.+ . . .....++.......+|..+||+|+|||||.++|+.|||+|+|++||..|++.|.. ...
T Consensus 319 ~~-~~~l----~-~---~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~-----~~~ 384 (526)
T 2pyx_A 319 VD-GAAA----D-K---LEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPP-----NRM 384 (526)
T ss_dssp CC-HHHH----H-H---CCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCS-----CHH
T ss_pred hc-Cccc----c-c---CCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhh-----cCC
Confidence 22 1111 1 1 1223444444445677889999999999999999999999999999999998863 234
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 010623 385 ALCNYLESFYTLRKPVASTINTLAGALYQV 414 (506)
Q Consensus 385 ~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~ 414 (506)
..+.+++.|+++|+++...+.......+..
T Consensus 385 ~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 414 (526)
T 2pyx_A 385 VMDTISARVNERYQQHWQQIIDFLKLHYVI 414 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567899999999999998887766655544
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=1.4e-33 Score=283.96 Aligned_cols=316 Identities=16% Similarity=0.133 Sum_probs=200.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcccccccccchHHHHHHhCch-hH-HhhcccceecceEEEE
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLE-DC-VEQIDAQRVFGYALFK 136 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~-~~-~~~~~~~~~~~~~~~~ 136 (506)
.||+||||||+||++|+.|+++ |++|+|+||.+.....+.+..+++++++.+...++. +. +... ........++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLN-PQFLEDFKLVH 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGC-CEEECCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHh-hccccceEEEe
Confidence 3899999999999999999999 999999999977665566777777776622222333 32 2221 12233444444
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
.+.... . .. ......++|..+.+.|.+.+.+. ++++++++ |+++++. . +++||+|
T Consensus 80 ~g~~~~--~---~~--~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~-------------~---~~~ad~v 135 (381)
T 3c4a_A 80 HNEPSL--M---ST--GVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGEL-------------P---LADYDLV 135 (381)
T ss_dssp SSSEEE--C---CC--CSCEEEEEHHHHHHHHHHHHHHT-TCEEETTCCCCSGGGC-------------C---GGGCSEE
T ss_pred CCeeEE--e---cC--CCceeeecHHHHHHHHHHHHHHC-CCEEEeCCEeccchhc-------------c---cccCCEE
Confidence 433221 1 00 12235789999999999999987 78888875 7776431 0 1359999
Q ss_pred EeecCCcccchhhccCCC-CCCc--cceeeEEEeccCCCCCCeeE-EEecCCCcEE--EEecCCCeEEEEEEecC-----
Q 010623 216 IVCDGCFSNLRRSLCNPK-VDVP--SCFVGLVLENCNLPFENHGH-VVLADPSPIL--FYPISSNEVRCLVDIPG----- 284 (506)
Q Consensus 216 V~AdG~~S~vR~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~p~~~~~~~~~~~~~~----- 284 (506)
|+|||.+|. |+.+.... .... .....+... ....+.... +...+.++++ ++|++++...+.+..+.
T Consensus 136 V~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~ 212 (381)
T 3c4a_A 136 VLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGT--SQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYAR 212 (381)
T ss_dssp EECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEE--SSCCSSEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHH
T ss_pred EECCCCCch-HHhhhhhcCCCcccCCccEEEEec--CCCCCcceeeEeeCCCcEEEEEEEEecCCeEEEEEECCcccccc
Confidence 999999999 99873211 1111 111122111 111112111 1123445443 68998887554444322
Q ss_pred CCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEecCC-ccCCCCCCCCcEEEEccCCCCCCCCcchhhHHH
Q 010623 285 QKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNR-SMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVA 363 (506)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~a 363 (506)
...+..+.++..+.+.+.+....+. . ..+.... ..|+.. .....+|..|||+|+|||||.++|++|||+|+|
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~l~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~a 285 (381)
T 3c4a_A 213 ARLGEMSEEASAEYVAKVFQAELGG-H-----GLVSQPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMA 285 (381)
T ss_dssp TTSSSSCHHHHHHHHHHHTHHHHTT-C-----CCBCCTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHH
T ss_pred CCcccCChHHHHHHHHHHhcccCCC-c-----hhhcCCC-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHH
Confidence 1222334445455554433211100 0 0011111 123222 234678999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcC
Q 010623 364 LSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSA 417 (506)
Q Consensus 364 i~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~ 417 (506)
|+||.+|+++|... .+.+++|+.|+++|++++..++..++.+.+.+..
T Consensus 286 l~Da~~La~~L~~~------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 333 (381)
T 3c4a_A 286 VVVAQLLVKALCTE------DGVPAALKRFEERALPLVQLFRGHADNSRVWFET 333 (381)
T ss_dssp HHHHHHHHHHHHHS------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 99999999999863 1357899999999999999999999888766544
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=2.6e-31 Score=280.80 Aligned_cols=348 Identities=17% Similarity=0.141 Sum_probs=208.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC------CCcEEEEecCCCCCCc-ccccccccchHHHHHHhCchhHHhhccccee-
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKD------GRRVHVIERDLSEPDR-IVGELLQPGGYLKLIELGLEDCVEQIDAQRV- 129 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~------G~~v~vvE~~~~~~~~-~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~- 129 (506)
.+++||+||||||+||++|+.|+++ |++|+|+||.+..... ..|..+.+++++.| ++-+...........
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~~~~~g~~~~~~~~ 110 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPDWKEKGAPLNTPVT 110 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTTHHHHTCCCCEECC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHHHHhcCCceeeeec
Confidence 3569999999999999999999999 9999999998765443 34566777776655 222211000000001
Q ss_pred -cceEEEECCceeeeecCC-cC-CCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeC-CeEEEEEEEe--
Q 010623 130 -FGYALFKDGNRTQISYPL-EK-FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK-GTIKGVQYKT-- 202 (506)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~~v~~v~v~~-- 202 (506)
..+.+...... ..++. .. .......+.+++..+.+.|.+.+++. +++++.++ |+++..++ +.+.+|+..+
T Consensus 111 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g 187 (584)
T 2gmh_A 111 EDRFGILTEKYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL-GVEVYPGYAAAEILFHEDGSVKGIATNDVG 187 (584)
T ss_dssp EEEEEEECSSCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEEECTTSSEEEEEECCEE
T ss_pred hhheeeeccCCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCCCEEEEEeCCcc
Confidence 11222222111 22221 11 01122356789999999999999988 78999885 99998775 4566676542
Q ss_pred --CCccE-------EEEEcCeEEeecCCcccchhhc----cCCCCCCccc-eeeEE-Eec--cCCCCCCeeEEEec----
Q 010623 203 --KAGEE-------LTAYAPLTIVCDGCFSNLRRSL----CNPKVDVPSC-FVGLV-LEN--CNLPFENHGHVVLA---- 261 (506)
Q Consensus 203 --~~G~~-------~~i~a~~vV~AdG~~S~vR~~l----~~~~~~~~~~-~~~~~-~~~--~~~~~~~~~~~~~~---- 261 (506)
.+|+. .+++||+||+|||.+|.+|+++ +......+.. ..++. ... .....+.....+++
T Consensus 188 ~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~ 267 (584)
T 2gmh_A 188 IQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLD 267 (584)
T ss_dssp ECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSC
T ss_pred ccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEecccc
Confidence 35532 3588999999999999999887 4432211111 11211 111 11122232223332
Q ss_pred --CCCcEEEEecC--CCeEEEEEEecCCCCCCCCchHHHHHHHHhcCCCCChhhhHHHHhh--hcCCCeEEecCCccCCC
Q 010623 262 --DPSPILFYPIS--SNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAA--VDGGNIKTMPNRSMPAA 335 (506)
Q Consensus 262 --~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 335 (506)
..+..+++|.. ++..++.+..+.+....... ..+.+.++.. .+.+.+.+... ........++......+
T Consensus 268 ~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~--~~~~l~~~~~---~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 342 (584)
T 2gmh_A 268 RHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLS--PFREFQRWKH---HPSIKPTLEGGKRIAYGARALNEGGFQSIP 342 (584)
T ss_dssp TTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCC--HHHHHHHHTT---STTTHHHHTTCEEEEEEEEEEECCGGGGCC
T ss_pred CCcCCceEEEEecCCCCeEEEEEEEecCcccccCC--hHHHHHHHHh---ChHHHHHhCCCeEEEecceEccCCCcccCC
Confidence 12345778888 67777777665432221111 2233333322 12233222111 00000012233334467
Q ss_pred CCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHH---HHHHHHHhcch-hHHHHHHHHHH
Q 010623 336 PYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNY---LESFYTLRKPV-ASTINTLAGAL 411 (506)
Q Consensus 336 ~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~---L~~Y~~~R~~~-~~~~~~~s~~~ 411 (506)
+|..+|++|+|||||.++|+.|||+|+||+||.+||++|..+...++. ..+++ |++|+++|++. +...+..++.+
T Consensus 343 ~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~-~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~ 421 (584)
T 2gmh_A 343 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL-QSKTIGLHVTEYEDNLKNSWVWKELYSVRNI 421 (584)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC-CCSSSSCCCTHHHHHHHTSHHHHHHHHTTTT
T ss_pred ccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhhhHHHHHHHHHHhHHHHHHHHHhCh
Confidence 788899999999999999999999999999999999999876422210 11343 89999999988 56666666655
Q ss_pred HHHHc
Q 010623 412 YQVFS 416 (506)
Q Consensus 412 ~~~~~ 416 (506)
..++.
T Consensus 422 ~~~~~ 426 (584)
T 2gmh_A 422 RPSCH 426 (584)
T ss_dssp TGGGG
T ss_pred hHHHH
Confidence 55553
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=9.3e-30 Score=266.16 Aligned_cols=340 Identities=16% Similarity=0.065 Sum_probs=212.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhH--HhhcccceecceEE
Q 010623 60 DADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDC--VEQIDAQRVFGYAL 134 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~---~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~ 134 (506)
.+||+|||||++|+++|+.|++ .|++|+|+|+.+. .....|..+.++....++.+|+.+. +.........+..+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~-~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV-RRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC-CceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 4799999999999999999999 9999999999753 3334566788888999999999875 44432111111111
Q ss_pred -----------EECCce-----e------------eee-------------cC-------CcCC----C-----------
Q 010623 135 -----------FKDGNR-----T------------QIS-------------YP-------LEKF----H----------- 151 (506)
Q Consensus 135 -----------~~~~~~-----~------------~~~-------------~~-------~~~~----~----------- 151 (506)
...+.. . ... +. ...+ .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 111100 0 000 00 0001 1
Q ss_pred C--CcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCC-eEEEEEEEeCCccEEEEEcCeEEeecCCcccch-h
Q 010623 152 S--DVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKG-TIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLR-R 227 (506)
Q Consensus 152 ~--~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~-~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR-~ 227 (506)
. ...++.+++..+.+.|.+.+.+. |++++.++|+++..+++ .+. .+.+.+|+ +++||+||+|||.+|.+| +
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~~~~~--~v~~~~g~--~~~ad~vV~A~G~~S~~~~~ 235 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIAR-GVRHVVDDVQHVGQDERGWIS--GVHTKQHG--EISGDLFVDCTGFRGLLINQ 235 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEE--EEEESSSC--EEECSEEEECCGGGCCCCCC
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHC-CCEEEECeEeEEEEcCCCCEE--EEEECCCC--EEEcCEEEECCCcchHHHHH
Confidence 1 23456789999999999999886 77887779999987544 333 34456775 477999999999999995 4
Q ss_pred hccCCCCC---CccceeeEEEe-ccCCC--CCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCCCCCCCchHHHHHHHH
Q 010623 228 SLCNPKVD---VPSCFVGLVLE-NCNLP--FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKT 301 (506)
Q Consensus 228 ~l~~~~~~---~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (506)
.++.+... ......++... ....+ ..........+.++++++|..+ ...+.+....+ ..+.++..+.+.+
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~---~~~~~~~~~~l~~ 311 (511)
T 2weu_A 236 TLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE---FISPEEAERELRS 311 (511)
T ss_dssp CTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT---TSCHHHHHHHHHH
T ss_pred HhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC---CCCHHHHHHHHHH
Confidence 55554321 11122222211 11111 1222234456677899999987 34444433322 2234455555555
Q ss_pred hcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCC
Q 010623 302 VVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLN 381 (506)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~ 381 (506)
.+.. . +.+ ......+.......++..+||+|+|||||.++|+.|||+|+|++||..|++.|...
T Consensus 312 ~~~~-~-~~~----------~~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~---- 375 (511)
T 2weu_A 312 TVAP-G-RDD----------LEANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE---- 375 (511)
T ss_dssp HHCT-T-CTT----------SCCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT----
T ss_pred HhCc-c-ccc----------ccceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC----
Confidence 4421 1 111 11122232223345667799999999999999999999999999999999998741
Q ss_pred ChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHHHHH
Q 010623 382 DAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMR 427 (506)
Q Consensus 382 ~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~r 427 (506)
...+.+++.|+++|+++...+.......+.+......+.+...+
T Consensus 376 --~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 419 (511)
T 2weu_A 376 --RWDPVLISAYNERMAHMVDGVKEFLVLHYKGAQREDTPYWKAAK 419 (511)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHhcc
Confidence 12357899999999999988887777666655443345554443
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=1.2e-29 Score=266.95 Aligned_cols=339 Identities=13% Similarity=0.095 Sum_probs=214.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH---CCCcEEEEecCCCCCCcccccccccchHH-HHHHhCchhH--Hhhcccceecce
Q 010623 59 FDADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYL-KLIELGLEDC--VEQIDAQRVFGY 132 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~---~G~~v~vvE~~~~~~~~~~g~~l~~~~~~-~l~~~g~~~~--~~~~~~~~~~~~ 132 (506)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+. ...|..+.+++.+ +++.+|+.+. +.........+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~ 102 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAI 102 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEee
Confidence 35899999999999999999999 999999999975433 3346778889899 9999999865 543221111222
Q ss_pred EE--EECC-------------c-eeeeecC------------------------------------CcCCC---------
Q 010623 133 AL--FKDG-------------N-RTQISYP------------------------------------LEKFH--------- 151 (506)
Q Consensus 133 ~~--~~~~-------------~-~~~~~~~------------------------------------~~~~~--------- 151 (506)
.+ |... . .....+. ..+..
T Consensus 103 ~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 2e4g_A 103 KFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGS 182 (550)
T ss_dssp EEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSC
T ss_pred eEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCC
Confidence 11 1110 0 0000000 00000
Q ss_pred -CCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCC-eEEEEEEEeCCccEEEEEcCeEEeecCCcccc-hhh
Q 010623 152 -SDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKG-TIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL-RRS 228 (506)
Q Consensus 152 -~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~-~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~v-R~~ 228 (506)
....++.+++..+.+.|.+.+.+.+|++++.++|+++..+++ .+. .+...+|+ +++||+||+|||.+|.+ ++.
T Consensus 183 ~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~--~v~~~~G~--~i~ad~vI~A~G~~S~~~~~~ 258 (550)
T 2e4g_A 183 KVTNYAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIE--SVRTATGR--VFDADLFVDCSGFRGLLINKA 258 (550)
T ss_dssp BCSCCEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEE--EEEETTSC--EEECSEEEECCGGGCCCCCCC
T ss_pred CCCCcceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEE--EEEECCCC--EEECCEEEECCCCchhhHHHH
Confidence 122346689999999999999886467777779999987544 333 34456775 46799999999999999 566
Q ss_pred ccCCCCCCc---cceeeEEEe-ccCCC---CCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCCCCCCCchHHHHHHHH
Q 010623 229 LCNPKVDVP---SCFVGLVLE-NCNLP---FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKT 301 (506)
Q Consensus 229 l~~~~~~~~---~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (506)
++.+..... .....+... ....+ ..........+.++.+++|+.+. ..+.+..... ..+.++..+.+.+
T Consensus 259 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~---~~~~~~~~~~l~~ 334 (550)
T 2e4g_A 259 MEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR---FATEDEAVREFCE 334 (550)
T ss_dssp TCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT---TSCHHHHHHHHHH
T ss_pred hCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC---CCChHHHHHHHHH
Confidence 665432111 111222211 11111 11222333456778899999773 3333333221 1234455556665
Q ss_pred hcCCCCChhhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCC
Q 010623 302 VVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLN 381 (506)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~ 381 (506)
.+... +.+ .....++.......++..+|++++|||||.++|++|||+|+|++||..|++.|...
T Consensus 335 ~~~~~--p~l----------~~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~---- 398 (550)
T 2e4g_A 335 MWHLD--PET----------QPLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDK---- 398 (550)
T ss_dssp HTTCC--TTT----------SCCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCT----
T ss_pred hhCcC--ccc----------CCCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcccc----
Confidence 44321 111 11122233333345567899999999999999999999999999999999988631
Q ss_pred ChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcCCCchhHH
Q 010623 382 DAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARK 424 (506)
Q Consensus 382 ~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~ 424 (506)
...+.+++.|+++|+++...+.......+.+-.....+.+.
T Consensus 399 --~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~r~~~~fw~ 439 (550)
T 2e4g_A 399 --SLNPVLTARFNREIETMFDDTRDFIQAHFYFSPRTDTPFWR 439 (550)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 22357999999999999998888777666653333234443
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=8.3e-30 Score=267.86 Aligned_cols=325 Identities=16% Similarity=0.113 Sum_probs=206.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEecCCCCCCcccccccccchHH-HHHHhCchhH--HhhcccceecceE
Q 010623 60 DADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYL-KLIELGLEDC--VEQIDAQRVFGYA 133 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~---~G~~v~vvE~~~~~~~~~~g~~l~~~~~~-~l~~~g~~~~--~~~~~~~~~~~~~ 133 (506)
.+||+|||||++|+++|+.|++ .|++|+|+|+.+.+. ...|..+.+++.. .++.+|+.+. +.........+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 4899999999999999999999 999999999975433 3346778888888 9999998864 4332211111111
Q ss_pred ----------------EEECCcee---eeec--------------C---------------C------cCCCCCcccccc
Q 010623 134 ----------------LFKDGNRT---QISY--------------P---------------L------EKFHSDVAGRGF 159 (506)
Q Consensus 134 ----------------~~~~~~~~---~~~~--------------~---------------~------~~~~~~~~~~~i 159 (506)
+...+... ...+ . . ..+ ..+..+.+
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~i 162 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTR-QMSHAWHF 162 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCB-CSCCEEEE
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCc-CCCccEEE
Confidence 11111000 0000 0 0 000 12335678
Q ss_pred cchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCe-EEEEEEEeCCccEEEEEcCeEEeecCCcccchh-hccCCCCCCc
Q 010623 160 HNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGT-IKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR-SLCNPKVDVP 237 (506)
Q Consensus 160 ~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~-v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~-~l~~~~~~~~ 237 (506)
++..+...|.+.+.+. |++++.++|+++..++++ +. .+...+|+ +++||+||+|||.+|.+|+ .++.+.....
T Consensus 163 ~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~g~~~--~v~~~~g~--~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~ 237 (538)
T 2aqj_A 163 DAHLVADFLKRWAVER-GVNRVVDEVVDVRLNNRGYIS--NLLTKEGR--TLEADLFIDCSGMRGLLINQALKEPFIDMS 237 (538)
T ss_dssp CHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEE--EEEETTSC--EECCSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred eHHHHHHHHHHHHHHC-CCEEEEeeEeEEEEcCCCcEE--EEEECCCc--EEEeCEEEECCCCchhhHHHHhCCCccccc
Confidence 9999999999999886 788887799999876443 33 34456775 4779999999999999954 4554322111
Q ss_pred ---cceeeEEEe-ccCCC---CCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCCCCCCCchHHHHHHHHhcCCCCChh
Q 010623 238 ---SCFVGLVLE-NCNLP---FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPRE 310 (506)
Q Consensus 238 ---~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (506)
....++... ....+ ..........+.++++++|..++ ..+.+.+... ..+.++..+.+.+.+... .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~---~~~~~~~~~~l~~~~~~~---~ 310 (538)
T 2aqj_A 238 DYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH---FTSRDQATADFLKLWGLS---D 310 (538)
T ss_dssp TTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT---TSCHHHHHHHHHHHHTCC---T
T ss_pred cccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC---CCChHHHHHHHHHHhcCC---C
Confidence 112222221 11111 11122334566778999999874 3333333221 123345555555544321 1
Q ss_pred hhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHH
Q 010623 311 IFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYL 390 (506)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L 390 (506)
+ .....++.......+|..+||+|+|||||.++|++|||+|+|++||..|++.|... ...+.+|
T Consensus 311 ~----------~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~------~~~~~~l 374 (538)
T 2aqj_A 311 N----------QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDT------SFDPRLS 374 (538)
T ss_dssp T----------CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBT------TCCHHHH
T ss_pred C----------CCceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhcc------CCCHHHH
Confidence 1 11223333333456777899999999999999999999999999999999988631 1235789
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHH
Q 010623 391 ESFYTLRKPVASTINTLAGALYQV 414 (506)
Q Consensus 391 ~~Y~~~R~~~~~~~~~~s~~~~~~ 414 (506)
+.|+++|+++...+.......+..
T Consensus 375 ~~Y~~~~~~~~~~~~~~~~~~y~~ 398 (538)
T 2aqj_A 375 DAFNAEIVHMFDDCRDFVQAHYFT 398 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999988876655554443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.95 E-value=3.5e-27 Score=240.81 Aligned_cols=322 Identities=14% Similarity=0.110 Sum_probs=179.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCc---c-cccccccchHHHHHHhCchhHHhhcccceecceEE
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR---I-VGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~---~-~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 134 (506)
++.||+||||||+||++|+.|+++|++|+|+||.+..... . .+..+...+...++.+|+...... .....+..+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~--~~~~~~~~~ 98 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE--EFGYFGHYY 98 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH--HHCEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh--cccccceeE
Confidence 4589999999999999999999999999999998632211 1 112234456667777765321111 112333333
Q ss_pred EECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceE--EEEEeeCCeEEEEEEEeCCccEEEEEc
Q 010623 135 FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTV--TSLLEEKGTIKGVQYKTKAGEELTAYA 212 (506)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v--~~~~~~~~~v~~v~v~~~~G~~~~i~a 212 (506)
...+.. ...+.. . ....+..+++..+...|.+.+.+. +++++..++ .++ +....++
T Consensus 99 ~~~~~~-~~~~~~-~--~~~~~~~v~~~~l~~~L~~~~~~~-Gv~v~~~~v~~~~l-----------------~~~~~~a 156 (430)
T 3ihm_A 99 YVGGPQ-PMRFYG-D--LKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDL-----------------EGLSEQY 156 (430)
T ss_dssp EECSSS-CEEEEE-E--EEEEEBEECHHHHHHHHHHHHHHT-TCEEEECCCCGGGH-----------------HHHHTTS
T ss_pred EECCCC-ccccch-h--cCCcceeecHHHHHHHHHHHHHHc-CCEEEEEecchhhh-----------------hhhcccC
Confidence 332221 111110 0 012346788889999999999887 566654321 111 0001238
Q ss_pred CeEEeecCCcccchhhccCCC---CCCccceeeEEEe-ccCCCCC-CeeEEEecCCCcEEEEecC--CCeEEEEE--Eec
Q 010623 213 PLTIVCDGCFSNLRRSLCNPK---VDVPSCFVGLVLE-NCNLPFE-NHGHVVLADPSPILFYPIS--SNEVRCLV--DIP 283 (506)
Q Consensus 213 ~~vV~AdG~~S~vR~~l~~~~---~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~p~~--~~~~~~~~--~~~ 283 (506)
|+||+|||.+|.+|....... ...+......... ....+.+ ......+...+.++++|.. ++...+.+ ..+
T Consensus 157 d~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~ 236 (430)
T 3ihm_A 157 DLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHI 236 (430)
T ss_dssp SEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECT
T ss_pred CEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecC
Confidence 999999999998875432211 1111122222111 1111222 2233344555677888863 23333333 333
Q ss_pred CCCCCCC-------CchHHHHHHHHhcCCCCChhhhHHHHhhh--c---CCCe---EEecCCccCCCCCCCCcEEE-Ecc
Q 010623 284 GQKVPSI-------SNGEMANYLKTVVAPQIPREIFHSFVAAV--D---GGNI---KTMPNRSMPAAPYPTPGALL-MGD 347 (506)
Q Consensus 284 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~~~~~~~~~~~~rv~L-vGD 347 (506)
....+.+ +.++..+.+.+.+.+.. +.+.+.+.... . ...+ ..++.......+|..||++| +||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GD 315 (430)
T 3ihm_A 237 GSDLEVLAHTKYDDDPRAFLDLMLEKLGKHH-PSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGD 315 (430)
T ss_dssp TSSSGGGGTSCTTTCHHHHHHHHHHHHHHHC-HHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGG
T ss_pred CCcHHHhccccCCCCHHHHHHHHHHHHHHhC-ccHHHHHhhchhccccCccceeecceeecccccccccCCCCEEEEecC
Confidence 2221111 33333333333222211 12221111111 0 1111 23344344567888999888 999
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhc-chhHHHHHHHHHH
Q 010623 348 AFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRK-PVASTINTLAGAL 411 (506)
Q Consensus 348 AAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~-~~~~~~~~~s~~~ 411 (506)
|||.++|++|||+|+||+||.+|+++|.... + .+++|.+|+.+|+ +++......++.+
T Consensus 316 Aah~~~p~~g~G~~~a~~da~~l~~~l~~~~---~---~~~~~~~~~~~r~~~~~~~~~~~~~~~ 374 (430)
T 3ihm_A 316 IQATVDPVLGQGANMASYAAWILGEEILAHS---V---YDLRFSEHLERRRQDRVLCATRWTNFT 374 (430)
T ss_dssp GTEECCGGGCCHHHHHHHHHHHHHHHHHHCS---C---CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCchhhhHHHHHHHHHHHHHHHHhcC---C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999752 1 4589999999998 5555555555443
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.93 E-value=3.1e-26 Score=237.61 Aligned_cols=308 Identities=14% Similarity=0.060 Sum_probs=180.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
+..+||+||||||+|+++|+.|++.|++|+|+|+.+.... .....+.+.+++.++.+|+++....+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~g~~~~~~~~~------------ 156 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRALGAKKFYGRFC------------ 156 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTTTHHHHCTTTT------------
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHcCCcccccccc------------
Confidence 3468999999999999999999999999999999865432 233446777888888888764321110
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee--CCeEEEEEEEeC-CccEEEEEcC
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE--KGTIKGVQYKTK-AGEELTAYAP 213 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~--~~~v~~v~v~~~-~G~~~~i~a~ 213 (506)
.. ....+++..+.+.|.+.+.+. +++++.++ |+++..+ ++....|++.+. +|+..+++||
T Consensus 157 --------------~~-~~~~~~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad 220 (497)
T 2bry_A 157 --------------TG-TLDHISIRQLQLLLLKVALLL-GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD 220 (497)
T ss_dssp --------------CT-TCCEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS
T ss_pred --------------cc-ccccCCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC
Confidence 00 012356788999999999886 78888884 9999864 233334555445 6733347799
Q ss_pred eEEeecCCcccchhhccCCCCCCc-cceeeEEEec-----cCCCCCCeeEEEecC----------CC-cE-EEEecCCCe
Q 010623 214 LTIVCDGCFSNLRRSLCNPKVDVP-SCFVGLVLEN-----CNLPFENHGHVVLAD----------PS-PI-LFYPISSNE 275 (506)
Q Consensus 214 ~vV~AdG~~S~vR~~l~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~----------~~-~~-~~~p~~~~~ 275 (506)
+||+|||++|.+|+..++...+.. ......+... ..... ..+..+..+ .+ .. .++|..++.
T Consensus 221 ~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~-~~G~~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~ 299 (497)
T 2bry_A 221 VLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVPE-ISGVARIYNQKFFQSLLKATGIDLENIVYYKDET 299 (497)
T ss_dssp EEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCC-BCC----CCSSHHHHHHHHHCCCEEEEEEEESSE
T ss_pred EEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchhh-cCceEEecChhhhHhHHhhcCCCcccccccCCCe
Confidence 999999999999987765443332 1111111110 00110 011111100 01 11 134444554
Q ss_pred EEEEEEecC-----CC-----CC---------CCCchHHHHH---HHHhcCCCCChhhh---HHHHh---hh-cCCCeEE
Q 010623 276 VRCLVDIPG-----QK-----VP---------SISNGEMANY---LKTVVAPQIPREIF---HSFVA---AV-DGGNIKT 326 (506)
Q Consensus 276 ~~~~~~~~~-----~~-----~~---------~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~---~~-~~~~~~~ 326 (506)
..+...... .. .+ ..+.+++... ..++..+...+.+. ..+.. .+ +......
T Consensus 300 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 379 (497)
T 2bry_A 300 HYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMR 379 (497)
T ss_dssp EEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTTTCSCCBCBCTTSSBCEEEEECSEEEE
T ss_pred EEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhccccchhhhhccCCCCCceeeeEEEEe
Confidence 333332110 00 00 0111111100 01111111110000 00100 01 2234556
Q ss_pred ecCCccCCCCCCCCc-EEEEccCCCC-CCCCcchhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhcchhHH
Q 010623 327 MPNRSMPAAPYPTPG-ALLMGDAFNM-RHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVAST 403 (506)
Q Consensus 327 ~~~~~~~~~~~~~~r-v~LvGDAAh~-~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~ 403 (506)
|+...+.+.+|..|| ++|+|||||. +.| .|||+|+||+||.+|+|+|+.+.. +....++| .+|++.+..
T Consensus 380 ~~~~~r~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~~~---g~~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 380 AESSARVQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRWAE---GAGPLEVL----AERESLYQL 450 (497)
T ss_dssp ESCSEEEEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCHHHHH----HHHHHHHTT
T ss_pred cchhhHHHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHHhC---CCCccchh----hhHHHHhhh
Confidence 788888889999998 9999999994 455 999999999999999999998642 22334555 778776653
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.80 E-value=3.3e-18 Score=168.52 Aligned_cols=291 Identities=11% Similarity=0.083 Sum_probs=143.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccc------------cccccchHHHHHHhCchhHHhhcccc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVG------------ELLQPGGYLKLIELGLEDCVEQIDAQ 127 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g------------~~l~~~~~~~l~~~g~~~~~~~~~~~ 127 (506)
++||+|||||++|+++|+.|+++|++|+|+||.+....+... ..+........+.+..+..... ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 79 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGH--VA 79 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTS--EE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCC--ee
Confidence 479999999999999999999999999999998654322111 1111111122211111111000 00
Q ss_pred eecceEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCcc
Q 010623 128 RVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGE 206 (506)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~ 206 (506)
............. +. ...... .....+..+.. |.+.+.+ +++++.++ |+++..++++ +++++.+|+
T Consensus 80 ~~~~~~~~~~~~~----~~--~~~~~~-~~~~~~~~~~~-l~~~l~~--g~~i~~~~~v~~i~~~~~~---~~v~~~~g~ 146 (336)
T 1yvv_A 80 EWTPLLYNFHAGR----LS--PSPDEQ-VRWVGKPGMSA-ITRAMRG--DMPVSFSCRITEVFRGEEH---WNLLDAEGQ 146 (336)
T ss_dssp EECCCEEEESSSB----CC--CCCTTS-CEEEESSCTHH-HHHHHHT--TCCEECSCCEEEEEECSSC---EEEEETTSC
T ss_pred eccccceeccCcc----cc--cCCCCC-ccEEcCccHHH-HHHHHHc--cCcEEecCEEEEEEEeCCE---EEEEeCCCc
Confidence 1111111111110 00 000000 11111222222 3333333 56788775 9999988774 556678886
Q ss_pred EEEEEcCeEEeecCCcccchhhccCC-------CCCCccceeeEEEeccCCCCCCeeEEEecCCCcEEEE------ecCC
Q 010623 207 ELTAYAPLTIVCDGCFSNLRRSLCNP-------KVDVPSCFVGLVLENCNLPFENHGHVVLADPSPILFY------PISS 273 (506)
Q Consensus 207 ~~~i~a~~vV~AdG~~S~vR~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~ 273 (506)
. ..+||+||+|+|.+|.+|.....+ ...........+........+.. .++ ...+++.++ |...
T Consensus 147 ~-~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~p~~~ 223 (336)
T 1yvv_A 147 N-HGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTPMQ-GCF-VQDSPLDWLARNRSKPERD 223 (336)
T ss_dssp E-EEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC-EEE-ECSSSEEEEEEGGGSTTCC
T ss_pred C-ccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCCCC-eEE-eCCCceeEEEecCcCCCCC
Confidence 3 345999999999999988653321 11111111111111222222212 222 233444333 4444
Q ss_pred Ce-EEEEEEecCC---CCCCCCchHHHHHHHHhcCCCCChhhhHHHHhhhcCCCeEEe----cCCccCCCCC--CCCcEE
Q 010623 274 NE-VRCLVDIPGQ---KVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTM----PNRSMPAAPY--PTPGAL 343 (506)
Q Consensus 274 ~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~rv~ 343 (506)
+. ..+++...++ .....+.++..+.+.+.+...+....... .......| +......... ..+|++
T Consensus 224 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p-----~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~ 298 (336)
T 1yvv_A 224 DTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAP-----VFSLAHRWLYARPAGAHEWGALSDADLGIY 298 (336)
T ss_dssp CSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCC-----SEEEEEEEEEEEESSCCCCSCEEETTTTEE
T ss_pred CCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCC-----cEEEccccCccCCCCCCCCCeeecCCCCEE
Confidence 43 4566655321 12233445554444443332222110000 00011122 3222222222 348999
Q ss_pred EEccCCCCCCCCcchhhHHHHHHHHHHHHHhhhcCC
Q 010623 344 LMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSN 379 (506)
Q Consensus 344 LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~ 379 (506)
|+|||+|. .|+|.|+.|+..||+.|.+..+
T Consensus 299 laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 299 VCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp ECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 99999974 4999999999999999987643
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.62 E-value=7.6e-15 Score=147.13 Aligned_cols=195 Identities=13% Similarity=0.081 Sum_probs=107.1
Q ss_pred ccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCccc-chhhccCCCC
Q 010623 157 RGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSLCNPKV 234 (506)
Q Consensus 157 ~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~-vR~~l~~~~~ 234 (506)
..++...+.+.|.+.+.+. +++++.+ +|+++..+++++ .+.+.+| +++||.||.|+|.+|. +.+.++...+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~---~v~~~~g---~~~a~~vV~A~G~~s~~l~~~~~~~~~ 231 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKML-GAEIFEHTPVLHVERDGEAL---FIKTPSG---DVWANHVVVASGVWSGMFFKQLGLNNA 231 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHT-TCEEETTCCCCEEECSSSSE---EEEETTE---EEEEEEEEECCGGGTHHHHHHTTCCCC
T ss_pred eEEcHHHHHHHHHHHHHHC-CCEEEcCCcEEEEEEECCEE---EEEcCCc---eEEcCEEEECCChhHHHHHHhcCCCCc
Confidence 4566778999999999887 6888877 499998877754 3445666 4779999999999996 7777664332
Q ss_pred CCccceeeEEEe-ccCCCCCCeeEEEecCCCcEEEEecCCCeEEEEEEecCCCCCCCCchHHHHHHHHhcCCCCChhhhH
Q 010623 235 DVPSCFVGLVLE-NCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFH 313 (506)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (506)
-.+ ..+..+. ....+... ...+.+ ..+++|..++...+..............++..+.+.+.+...+| .+..
T Consensus 232 ~~~--~~g~~~~~~~~~~~~~--~~~~~~--~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p-~l~~ 304 (382)
T 1ryi_A 232 FLP--VKGECLSVWNDDIPLT--KTLYHD--HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLP-AIQN 304 (382)
T ss_dssp CEE--EEEEEEEEECCSSCCC--SEEEET--TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCG-GGGG
T ss_pred eec--cceEEEEECCCCCCcc--ceEEcC--CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCC-CcCC
Confidence 222 2232222 11111111 122332 56778887764433332111111111122222222222211122 1110
Q ss_pred HHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCC-----CCCCCCcchhhHHHHHHHHHHHHHhhh
Q 010623 314 SFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVILRNLLRH 376 (506)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAA-----h~~~P~~GqG~n~ai~Da~~La~~L~~ 376 (506)
......|.- ...+..++..++|++. +...+++|.|+..|...|..+++.+..
T Consensus 305 -------~~~~~~w~g----~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 305 -------MKVDRFWAG----LRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp -------SEEEEEEEE----EEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred -------CceeeEEEE----ecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 001111210 0112234556778763 345778999999999999999998874
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.56 E-value=1e-13 Score=139.89 Aligned_cols=116 Identities=19% Similarity=0.135 Sum_probs=73.3
Q ss_pred cccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc-cchhhccCCCCC
Q 010623 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNPKVD 235 (506)
Q Consensus 158 ~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S-~vR~~l~~~~~~ 235 (506)
.++...+...|.+.+++. +++++.+ +|+++..+++++.+|+ +.+| +++||.||.|+|.+| .+++.++...+.
T Consensus 170 ~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~--~~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEM-GVDIIQNCEVTGFIKDGEKVTGVK--TTRG---TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp BCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTC---CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred cCCHHHHHHHHHHHHHHC-CCEEEcCCeEEEEEEeCCEEEEEE--eCCc---eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 455668889999999887 7888886 5999998877655444 5566 367999999999999 688877765432
Q ss_pred CccceeeEEEeccCCCCCCeeEEEecCCCcEEEEecCCCeEEEEEEe
Q 010623 236 VPSCFVGLVLENCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDI 282 (506)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 282 (506)
.+.....+... ..+.. ....+.......++.|..++...+....
T Consensus 244 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~y~~p~~~g~~~ig~~~ 287 (405)
T 2gag_B 244 QSHPLQALVSE--LFEPV-HPTVVMSNHIHVYVSQAHKGELVMGAGI 287 (405)
T ss_dssp EEEEEEEEEEE--EBCSC-CCSEEEETTTTEEEEECTTSEEEEEEEE
T ss_pred cccceeEEEec--CCccc-cCceEEeCCCcEEEEEcCCCcEEEEecc
Confidence 22211111111 11111 1112334445677888877765555443
No 33
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.56 E-value=1.4e-13 Score=142.99 Aligned_cols=213 Identities=12% Similarity=0.003 Sum_probs=109.7
Q ss_pred cccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEeecCCccc-chhh-ccCCC
Q 010623 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSN-LRRS-LCNPK 233 (506)
Q Consensus 158 ~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~-vR~~-l~~~~ 233 (506)
.++...+...|.+.+.+. |++++++ +|+++..++ ++.+|++.+ .+|++.+++||.||+|+|.+|. +++. ++...
T Consensus 145 ~v~~~~l~~~l~~~a~~~-Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRK-GGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 467788999999999988 6788876 599998876 455676655 4676667899999999999995 5553 44321
Q ss_pred CCCccceeeEEEe-ccCCCCCCeeEEEec-CCCcEEEEecCCCeEEEEEEe-cC--C-CCCCCCchHHHHHHHHhcCCCC
Q 010623 234 VDVPSCFVGLVLE-NCNLPFENHGHVVLA-DPSPILFYPISSNEVRCLVDI-PG--Q-KVPSISNGEMANYLKTVVAPQI 307 (506)
Q Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~ 307 (506)
...-....|..+. +...+. ....++-. ++..++++|..++...+..+. +. . ..+..+.++.. .+.+.....+
T Consensus 223 ~~~i~p~rG~~~~~~~~~~~-~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~ 300 (501)
T 2qcu_A 223 PYGIRLIKGSHIVVPRVHTQ-KQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEIN-YLLNVYNTHF 300 (501)
T ss_dssp SSCBCCEEEEEEEEECSSSC-SCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHHH-HHHHHHHHHB
T ss_pred ccccccceeEEEEECCCCCC-ceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHHH-HHHHHHHHhc
Confidence 1111112222221 222222 22222222 345678889887643222211 01 1 11122333332 2222111111
Q ss_pred ChhhhHHHHhhhcCCCeEEecCCc--cC-CCCCCCCcEEE--EccCCCCCCCCcchhhHHHHHHHHHHHHHhhhc
Q 010623 308 PREIFHSFVAAVDGGNIKTMPNRS--MP-AAPYPTPGALL--MGDAFNMRHPLTGGGMTVALSDIVILRNLLRHL 377 (506)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~rv~L--vGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~ 377 (506)
|..+... .+.....-..|... .+ ..+...+.++. .+|..|.+...+|.|+.++-.=|..+++.+...
T Consensus 301 p~~l~~~---~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~ 372 (501)
T 2qcu_A 301 KKQLSRD---DIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPY 372 (501)
T ss_dssp SSCCCGG---GCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGG
T ss_pred CCCCCcc---cEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHh
Confidence 1011100 00000001112111 00 11122345666 577777777778888888877777777766543
No 34
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.56 E-value=5.8e-15 Score=158.98 Aligned_cols=68 Identities=6% Similarity=0.083 Sum_probs=52.9
Q ss_pred ccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCccc-chhhcc
Q 010623 157 RGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSLC 230 (506)
Q Consensus 157 ~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~-vR~~l~ 230 (506)
..++...+...|.+.+++. |++++.++ |+++..++++ +.+.+.+|.+ ++||.||.|+|.+|. +.+..+
T Consensus 412 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~--i~Ad~VVlAtG~~s~~l~~~~~ 481 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQ-GLQIYYQYQLQNFSRKDDC---WLLNFAGDQQ--ATHSVVVLANGHQISRFSQTST 481 (676)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEECCGGGGGCSTTTTT
T ss_pred eeeCHHHHHHHHHHHHHhC-CCEEEeCCeeeEEEEeCCe---EEEEECCCCE--EECCEEEECCCcchhccccccC
Confidence 3456778999999999988 68888874 9999998885 4566777763 679999999999986 444443
No 35
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.55 E-value=1.5e-13 Score=144.33 Aligned_cols=172 Identities=19% Similarity=0.252 Sum_probs=100.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc-cccccccchHHHHHHhCch---hHHh------hcccc--
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI-VGELLQPGGYLKLIELGLE---DCVE------QIDAQ-- 127 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~-~g~~l~~~~~~~l~~~g~~---~~~~------~~~~~-- 127 (506)
++||+|||||++|+++|+.|+++|++|+|+||++.....+ ....+.+.+.+.+++..+. +.+. .....
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~l~ 97 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPHVT 97 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCchhc
Confidence 5999999999999999999999999999999985433221 1222333444444332211 0000 00000
Q ss_pred -------eec------------ceEEEEC--Cce-----eee-------ecCCcCCC-C----CcccccccchHHHHHHH
Q 010623 128 -------RVF------------GYALFKD--GNR-----TQI-------SYPLEKFH-S----DVAGRGFHNGRFVQRLR 169 (506)
Q Consensus 128 -------~~~------------~~~~~~~--~~~-----~~~-------~~~~~~~~-~----~~~~~~i~~~~l~~~L~ 169 (506)
+.. +...++. +.. ..+ ..|..... . ......++...+...|.
T Consensus 98 ~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~L~ 177 (561)
T 3da1_A 98 TPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLEIM 177 (561)
T ss_dssp EEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHHHH
T ss_pred cccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHHHH
Confidence 000 0000000 000 000 01100000 0 00112566778999999
Q ss_pred HHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEeecCCcc-cchhhccCC
Q 010623 170 EKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFS-NLRRSLCNP 232 (506)
Q Consensus 170 ~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S-~vR~~l~~~ 232 (506)
+.+.+. |++++++ +|+++..+++++.+|++.+ .+|+..+++||.||+|+|.+| .+++.++..
T Consensus 178 ~~a~~~-G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 178 KEAVAR-GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp HHHHHT-TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred HHHHHc-CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 999888 6777776 5999999999888888876 356667789999999999999 678877654
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.55 E-value=6.3e-13 Score=133.10 Aligned_cols=197 Identities=12% Similarity=0.037 Sum_probs=103.8
Q ss_pred cccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc-cchhhccCC--C
Q 010623 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNP--K 233 (506)
Q Consensus 158 ~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S-~vR~~l~~~--~ 233 (506)
.++...+...|.+.+++. +++++.+ +|+++..+++++.+|+ +.+| +++||.||.|+|.+| .+.+.++.. .
T Consensus 145 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~v~gv~--~~~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~~ 218 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEY-GAKLLEYTEVKGFLIENNEIKGVK--TNKG---IIKTGIVVNATNAWANLINAMAGIKTKI 218 (382)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTE---EEECSEEEECCGGGHHHHHHHHTCCSCC
T ss_pred eECHHHHHHHHHHHHHHC-CCEEECCceEEEEEEECCEEEEEE--ECCc---EEECCEEEECcchhHHHHHHHcCCCcCc
Confidence 456778899999999887 7888887 5999998877655444 5666 477999999999999 566666654 2
Q ss_pred CCCccceeeEEEeccCCCCCCeeEEEecCC-CcEEEEecCCCeEEEEE-Eec-CCCCC-CCCchHHHHHHHHhcCCCCCh
Q 010623 234 VDVPSCFVGLVLENCNLPFENHGHVVLADP-SPILFYPISSNEVRCLV-DIP-GQKVP-SISNGEMANYLKTVVAPQIPR 309 (506)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 309 (506)
+..+ ..+.+......+.......++... ...++.|..++ ..+.. ... ..... ..+.+...+.++. +...+|
T Consensus 219 ~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~p- 293 (382)
T 1y56_B 219 PIEP--YKHQAVITQPIKRGTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSYY-FTKIIP- 293 (382)
T ss_dssp CCEE--EEEEEEEECCCSTTSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHHH-HHHHCG-
T ss_pred CCCe--eEeEEEEEccCCcccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHHH-HHHhCC-
Confidence 2222 222222211111111102233333 46777887766 33332 111 11111 1222222222221 111121
Q ss_pred hhhHHHHhhhcCCCeEEecCCccCCCCCCCCcEEEEccCC-----CCCCCCcchhhHHHHHHHHHHHHHhhh
Q 010623 310 EIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVILRNLLRH 376 (506)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAA-----h~~~P~~GqG~n~ai~Da~~La~~L~~ 376 (506)
.+.. ......|. .. .....++..++|... +...-++|.|+.++..-|..+++.+..
T Consensus 294 ~l~~-------~~~~~~~~-g~---r~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 294 ALKN-------LLILRTWA-GY---YAKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp GGGG-------SEEEEEEE-EE---EEECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcCC-------CCceEEEE-ec---cccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 1110 00111111 00 011123445566543 223457889999999999999988864
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.54 E-value=3.7e-13 Score=133.85 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=55.6
Q ss_pred cccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc-cchhhc-cCC
Q 010623 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSL-CNP 232 (506)
Q Consensus 158 ~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S-~vR~~l-~~~ 232 (506)
.++...+...|.+.+++. |++++.+ +|+++..+++++ +.+.+.+|+..+++||.||.|+|.+| .+.+.+ +.+
T Consensus 146 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGG--FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSS--EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCce--EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 466778999999999988 7888877 599999876642 33456677555688999999999999 566666 654
No 38
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.52 E-value=8.6e-13 Score=125.28 Aligned_cols=38 Identities=24% Similarity=0.573 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
|++||+||||||+||+||+.|+++|++|+|+||.+.+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 45899999999999999999999999999999987654
No 39
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.52 E-value=2.1e-13 Score=132.16 Aligned_cols=141 Identities=23% Similarity=0.277 Sum_probs=97.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCccc-------ccccccchHHHHHHhCchhHHhhccccee
Q 010623 59 FDADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIV-------GELLQPGGYLKLIELGLEDCVEQIDAQRV 129 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~~-------g~~l~~~~~~~l~~~g~~~~~~~~~~~~~ 129 (506)
.++||+|||||++|+++|+.|+++ |++|+|+|+.+....... ...+.+...+.|+++|+.-.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~--------- 148 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE--------- 148 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE---------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc---------
Confidence 358999999999999999999997 999999999865432111 11123444566666665310
Q ss_pred cceEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeC----------------
Q 010623 130 FGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK---------------- 192 (506)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~---------------- 192 (506)
..+.. ....+..++.+.|.+.+.+.+++++++++ ++++..++
T Consensus 149 ------~~G~~---------------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~ 207 (344)
T 3jsk_A 149 ------DEGDY---------------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAED 207 (344)
T ss_dssp ------ECSSE---------------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC---------------
T ss_pred ------ccCCe---------------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccccc
Confidence 00100 00113456778999999887799999985 89988765
Q ss_pred -C--eEEEEEEEe----CCc------cEEEEEcCeEEeecCCcccchhhc
Q 010623 193 -G--TIKGVQYKT----KAG------EELTAYAPLTIVCDGCFSNLRRSL 229 (506)
Q Consensus 193 -~--~v~~v~v~~----~~G------~~~~i~a~~vV~AdG~~S~vR~~l 229 (506)
+ ++.+|.+.. .+| +..+++|++||+|||..|++++.+
T Consensus 208 ~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 208 EAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp -CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred CCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 3 777877642 233 335789999999999999976654
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.51 E-value=1.2e-14 Score=156.80 Aligned_cols=69 Identities=9% Similarity=-0.027 Sum_probs=50.9
Q ss_pred ccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCccc-chhhcc
Q 010623 157 RGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSLC 230 (506)
Q Consensus 157 ~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~-vR~~l~ 230 (506)
..++...+...|.+.+.+. |++++.+ +|+++..++++ +.+.+.+|+ .+++||.||.|+|.+|. +.+.++
T Consensus 407 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~-~~i~Ad~VVlAtG~~s~~l~~~~~ 477 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQN-GMTCHYQHELQRLKRIDSQ---WQLTFGQSQ-AAKHHATVILATGHRLPEWEQTHH 477 (689)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEECSSS---EEEEEC-CC-CCEEESEEEECCGGGTTCSTTTTT
T ss_pred eEECHHHHHHHHHHHHHhC-CCEEEeCCeEeEEEEeCCe---EEEEeCCCc-EEEECCEEEECCCcchhccccccC
Confidence 3456678999999999887 6788877 49999988775 445566664 13679999999999985 444443
No 41
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.50 E-value=1.1e-13 Score=145.82 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=106.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc--cccccccchHHHHHHhCchhHHhhcccc--------
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGELLQPGGYLKLIELGLEDCVEQIDAQ-------- 127 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~--~g~~l~~~~~~~l~~~g~~~~~~~~~~~-------- 127 (506)
+.++||+|||||++||++|+.|+++|.+|+|+||.+...... .+..++......++.+|+.+........
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 356899999999999999999999999999999987654322 2233433333444555543222111000
Q ss_pred --------------------eecceEEEECCceeeeec-CCcCCCC--CcccccccchHHHHHHHHHHHcCCCEEEEece
Q 010623 128 --------------------RVFGYALFKDGNRTQISY-PLEKFHS--DVAGRGFHNGRFVQRLREKAASLPNVRLEQGT 184 (506)
Q Consensus 128 --------------------~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~ 184 (506)
...+..+. .... ....... .+....+....+...|.+.+.+. +++++.++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~------~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~ 271 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLD------DLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRLNS 271 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCC------EEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHT-TCCEECSE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccc------cccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCC
Confidence 00010000 0000 0000000 00011134567889999999887 78888885
Q ss_pred -EEEEEeeC-CeEEEEEEEeCCccEEEEEcCeEEeecCCcccchhhc
Q 010623 185 -VTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSL 229 (506)
Q Consensus 185 -v~~~~~~~-~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~~l 229 (506)
|+++..++ +++.+|++.+.+|+..+++||.||.|+|++|..|+++
T Consensus 272 ~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 272 RVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 99999887 8888898887788767789999999999999887655
No 42
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.49 E-value=4.9e-13 Score=128.21 Aligned_cols=140 Identities=23% Similarity=0.264 Sum_probs=95.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCCCcc--ccc-----ccccchHHHHHHhCchhHHhhcccceecc
Q 010623 60 DADVIVVGAGVAGAALANTLAKD-GRRVHVIERDLSEPDRI--VGE-----LLQPGGYLKLIELGLEDCVEQIDAQRVFG 131 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~-G~~v~vvE~~~~~~~~~--~g~-----~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 131 (506)
++||+|||||++|+++|+.|+++ |++|+|+||.+...... .+. .+.....+.++++|+.-
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~------------ 106 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY------------ 106 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC------------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc------------
Confidence 48999999999999999999997 99999999986543211 110 11122334444444320
Q ss_pred eEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-------
Q 010623 132 YALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK------- 203 (506)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~------- 203 (506)
...+.. ....+...+...|.+.+.+..+++++.++ |+++..+++++.+|.+...
T Consensus 107 ---~~~~~~---------------~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~ 168 (284)
T 1rp0_A 107 ---DEQDTY---------------VVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHH 168 (284)
T ss_dssp ---EECSSE---------------EEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTT
T ss_pred ---ccCCCE---------------EEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccC
Confidence 000000 00124566778888888775589999885 9999988888878877521
Q ss_pred C---ccEEEEEcCeEEeecCCcccchhhc
Q 010623 204 A---GEELTAYAPLTIVCDGCFSNLRRSL 229 (506)
Q Consensus 204 ~---G~~~~i~a~~vV~AdG~~S~vR~~l 229 (506)
+ |+..+++||.||+|+|.+|.++...
T Consensus 169 ~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 169 TQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred ccccCceEEEECCEEEECCCCchHHHHHH
Confidence 2 3445688999999999999887654
No 43
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.48 E-value=2e-12 Score=129.67 Aligned_cols=164 Identities=21% Similarity=0.191 Sum_probs=93.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC--Cccc--cccccc------chH-HHHHHhCchhHHhhccc--
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP--DRIV--GELLQP------GGY-LKLIELGLEDCVEQIDA-- 126 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~--~~~~--g~~l~~------~~~-~~l~~~g~~~~~~~~~~-- 126 (506)
++||+|||||++|+++|+.|+++|++|+|+|+..... ..+. +..+.+ ... ...+....++.+.+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999986433 1111 111111 111 11222233333322100
Q ss_pred -ceecceEEEECC-c------------------------eeeeecCCcCCCC------CcccccccchHHHHHHHHHHHc
Q 010623 127 -QRVFGYALFKDG-N------------------------RTQISYPLEKFHS------DVAGRGFHNGRFVQRLREKAAS 174 (506)
Q Consensus 127 -~~~~~~~~~~~~-~------------------------~~~~~~~~~~~~~------~~~~~~i~~~~l~~~L~~~~~~ 174 (506)
....+....... . .....+|.-.... .+....++...+...|.+.+++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 011111111110 0 0000011000000 0112345667888999999998
Q ss_pred CCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCccc-chhhcc
Q 010623 175 LPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSLC 230 (506)
Q Consensus 175 ~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~-vR~~l~ 230 (506)
. +++++.+ +|+++..++++ +.+.+.+| +++||.||.|+|.+|. +.+.++
T Consensus 163 ~-Gv~i~~~~~v~~i~~~~~~---~~v~~~~g---~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 163 R-GAKVLTHTRVEDFDISPDS---VKIETANG---SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp T-TCEEECSCCEEEEEECSSC---EEEEETTE---EEEEEEEEECCGGGHHHHGGGGT
T ss_pred C-CCEEEcCcEEEEEEecCCe---EEEEeCCC---EEEeCEEEEecCccHHHHhhhhc
Confidence 8 7888877 59999887664 34555555 3779999999999985 445454
No 44
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.48 E-value=1.1e-13 Score=146.06 Aligned_cols=165 Identities=21% Similarity=0.194 Sum_probs=103.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc--cccccccchHHHHHHhCchhHHhhcccc---------
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGELLQPGGYLKLIELGLEDCVEQIDAQ--------- 127 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~--~g~~l~~~~~~~l~~~g~~~~~~~~~~~--------- 127 (506)
.++||+|||||++||++|+.|+++|.+|+|+||.+...... .+..++.......+++|+.+....+...
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999987554321 1222333333344455543222111000
Q ss_pred -------------------eecceEEEECCceeeeecCCcCCCCC--cccccccchHHHHHHHHHHHcCCCEEEEece-E
Q 010623 128 -------------------RVFGYALFKDGNRTQISYPLEKFHSD--VAGRGFHNGRFVQRLREKAASLPNVRLEQGT-V 185 (506)
Q Consensus 128 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v 185 (506)
...+..+.. ............ +.........+...|.+.+.+. +++++.++ |
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-----~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~~~~v 278 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTD-----VGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRMNTRG 278 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCE-----EECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCcc-----CcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCCEe
Confidence 000000000 000000000000 0000123457889999999887 78888885 9
Q ss_pred EEEEeeC-CeEEEEEEEeCCccEEEEEcCeEEeecCCcccchhhc
Q 010623 186 TSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSL 229 (506)
Q Consensus 186 ~~~~~~~-~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~~l 229 (506)
+++..++ +++.+|++.+.+|+..+++||.||.|+|.+|..++++
T Consensus 279 ~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 279 IEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred eEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 9999876 8888898877678767789999999999999866543
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.47 E-value=3.1e-12 Score=128.82 Aligned_cols=167 Identities=24% Similarity=0.198 Sum_probs=95.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccc----cccccc-----h-HHHHHHhCchhHHhhccc--
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVG----ELLQPG-----G-YLKLIELGLEDCVEQIDA-- 126 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g----~~l~~~-----~-~~~l~~~g~~~~~~~~~~-- 126 (506)
.++||+|||||++|+++|+.|+++|++|+|+||.+.......+ ..+... . ....+.+..++.+.+...
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 3589999999999999999999999999999998654311111 111100 0 011222333333321100
Q ss_pred -ceecceE-EEECCc-------------------ee-e-------eecCCcCCCC------CcccccccchHHHHHHHHH
Q 010623 127 -QRVFGYA-LFKDGN-------------------RT-Q-------ISYPLEKFHS------DVAGRGFHNGRFVQRLREK 171 (506)
Q Consensus 127 -~~~~~~~-~~~~~~-------------------~~-~-------~~~~~~~~~~------~~~~~~i~~~~l~~~L~~~ 171 (506)
....+.. +..... .. . ..++...... .+.+..++...+...|.+.
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 162 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTL 162 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHH
Confidence 0111111 111110 00 0 0001000000 0112245566788899999
Q ss_pred HHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc-cchhhccCC
Q 010623 172 AASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNP 232 (506)
Q Consensus 172 ~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S-~vR~~l~~~ 232 (506)
+.+. +++++.+ +|+++..++++ +++.+.+| +++||.||+|+|.+| .+++.++..
T Consensus 163 a~~~-Gv~i~~~~~V~~i~~~~~~---v~v~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 218 (397)
T 2oln_A 163 AQAA-GATLRAGETVTELVPDADG---VSVTTDRG---TYRAGKVVLACGPYTNDLLEPLGAR 218 (397)
T ss_dssp HHHT-TCEEEESCCEEEEEEETTE---EEEEESSC---EEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred HHHc-CCEEECCCEEEEEEEcCCe---EEEEECCC---EEEcCEEEEcCCcChHHHhhhcCCC
Confidence 8887 6888877 59999988774 44555555 377999999999995 577777653
No 46
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.47 E-value=6.5e-13 Score=132.77 Aligned_cols=69 Identities=9% Similarity=0.058 Sum_probs=54.2
Q ss_pred ccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc-cchhhccCC
Q 010623 157 RGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNP 232 (506)
Q Consensus 157 ~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S-~vR~~l~~~ 232 (506)
..++...+...|.+.+++. |++++.+ +|+++..++++ +.+.+.+| +++||.||.|+|.+| .+.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~~~~---~~V~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRN-QGQVLCNHEALEIRRVDGA---WEVRCDAG---SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEESSCCCCEEEEETTE---EEEECSSE---EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEeCCe---EEEEeCCC---EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3466778999999999988 7888876 59999988874 45556666 477999999999999 466666654
No 47
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.42 E-value=5.7e-13 Score=138.58 Aligned_cols=64 Identities=27% Similarity=0.405 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCCEEEEece-EEEEEee-CCeEEEEEEEeCCccEEEEEcC-eEEeecCCcccchhh
Q 010623 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKTKAGEELTAYAP-LTIVCDGCFSNLRRS 228 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~~v~v~~~~G~~~~i~a~-~vV~AdG~~S~vR~~ 228 (506)
.+...|.+.+++. +++++.++ |+++..+ ++++++|.+.. +|+..+++|+ .||.|+|++|..+++
T Consensus 203 ~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~m 269 (510)
T 4at0_A 203 MLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDKM 269 (510)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHHH
T ss_pred HHHHHHHHHHHHc-CCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHHH
Confidence 7889999999888 78898885 9999988 68899998876 4555679995 999999999964433
No 48
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.41 E-value=1.4e-12 Score=131.51 Aligned_cols=143 Identities=23% Similarity=0.239 Sum_probs=88.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc----cccc------cc---------cchHHHHHHhCch
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI----VGEL------LQ---------PGGYLKLIELGLE 118 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~----~g~~------l~---------~~~~~~l~~~g~~ 118 (506)
+.++||+|||||++|+++|+.|+++|++|+|+||.+....+. .+.. .. ......+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346899999999999999999999999999999987543211 0000 00 0011223333332
Q ss_pred hHHhhcccceecceEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEE
Q 010623 119 DCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKG 197 (506)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~ 197 (506)
+.+..... .+........ ...........+.+.|.+.+++. +++++.++ |+++..++++
T Consensus 105 ~~~~~~~~---~Gi~~~~~~~-------------g~~~~~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~~~~--- 164 (417)
T 3v76_A 105 DFVALVER---HGIGWHEKTL-------------GQLFCDHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERTASG--- 164 (417)
T ss_dssp HHHHHHHH---TTCCEEECST-------------TEEEESSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---
T ss_pred HHHHHHHH---cCCCcEEeeC-------------CEEeeCCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---
Confidence 22211110 1111111000 00000234557888999998887 78888875 9999988774
Q ss_pred EEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 198 VQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 198 v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
+.+.+.+| +++||.||+|+|++|
T Consensus 165 ~~V~~~~g---~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 165 FRVTTSAG---TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEEETTE---EEEESEEEECCCCSS
T ss_pred EEEEECCc---EEEeeEEEECCCCcc
Confidence 55667777 477999999999999
No 49
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.40 E-value=3.2e-12 Score=118.70 Aligned_cols=131 Identities=29% Similarity=0.303 Sum_probs=89.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+|||||++|+.+|+.|++.|.+|+|+|+.... .|...++.. ..+.....+.++. +
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~----~G~~~~~~~----~~~~~~~~~~~~~-----------d-- 61 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA----VMMPFLPPK----PPFPPGSLLERAY-----------D-- 61 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG----TTCCSSCCC----SCCCTTCHHHHHC-----------C--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc----CCcccCccc----cccchhhHHhhhc-----------c--
Confidence 589999999999999999999999999999997321 111111100 0000000000000 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
...+ ++..+...|.+.+++.++++++.++|+++..+++++.+|. ..+|+ +++||+||.|+
T Consensus 62 -----------~~g~-----~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~--~~~g~--~i~a~~VV~A~ 121 (232)
T 2cul_A 62 -----------PKDE-----RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVR--TWEGP--PARGEKVVLAV 121 (232)
T ss_dssp -----------TTCC-----CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSC--CEECSEEEECC
T ss_pred -----------CCCC-----CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEE--ECCCC--EEECCEEEECC
Confidence 0000 5667888999999887689888767999998888655444 56775 46799999999
Q ss_pred CCcccchhhccC
Q 010623 220 GCFSNLRRSLCN 231 (506)
Q Consensus 220 G~~S~vR~~l~~ 231 (506)
|.+|..+..++.
T Consensus 122 G~~s~~~~~~G~ 133 (232)
T 2cul_A 122 GSFLGARLFLGG 133 (232)
T ss_dssp TTCSSCEEEETT
T ss_pred CCChhhceecCC
Confidence 999998876654
No 50
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.39 E-value=3.5e-12 Score=122.89 Aligned_cols=142 Identities=26% Similarity=0.303 Sum_probs=93.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCccc-c------cccccchHHHHHHhCchhHHhhccccee
Q 010623 59 FDADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIV-G------ELLQPGGYLKLIELGLEDCVEQIDAQRV 129 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~~-g------~~l~~~~~~~l~~~g~~~~~~~~~~~~~ 129 (506)
.++||+||||||+|+++|+.|+++ |++|+|+|+.+....... + ..+.+...+.|+++|+.-.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~--------- 134 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE--------- 134 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE---------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc---------
Confidence 357999999999999999999998 999999999865432111 0 1122233444544443310
Q ss_pred cceEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeC----C--eEEEEEEEe
Q 010623 130 FGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK----G--TIKGVQYKT 202 (506)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~----~--~v~~v~v~~ 202 (506)
..+. .....+...+...|.+.+.+.++++++.+. |+++..++ + ++.||.+..
T Consensus 135 ------~~g~---------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~ 193 (326)
T 2gjc_A 135 ------DEGD---------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193 (326)
T ss_dssp ------ECSS---------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEE
T ss_pred ------cCCC---------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecc
Confidence 0000 000113456788899999887799999885 99998763 4 788887742
Q ss_pred ----CCc------cEEEEEc---------------CeEEeecCCcccchhhcc
Q 010623 203 ----KAG------EELTAYA---------------PLTIVCDGCFSNLRRSLC 230 (506)
Q Consensus 203 ----~~G------~~~~i~a---------------~~vV~AdG~~S~vR~~l~ 230 (506)
.+| +..+++| ++||+|||..|++.+.+.
T Consensus 194 ~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 194 TLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp HHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred eeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 233 3356889 999999999998877664
No 51
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.38 E-value=1.8e-11 Score=128.72 Aligned_cols=72 Identities=24% Similarity=0.212 Sum_probs=56.5
Q ss_pred ccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeC-CccEEEEEcCeEEeecCCcc-cchhhccC
Q 010623 159 FHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFS-NLRRSLCN 231 (506)
Q Consensus 159 i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~vV~AdG~~S-~vR~~l~~ 231 (506)
++...+...|.+.+.+. |+++.++ +|+++..+++++++|++.+. +|+..+++||.||+|+|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 45667888888888887 6788777 59999998888888887763 56555789999999999998 46665554
No 52
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.37 E-value=6.2e-12 Score=128.33 Aligned_cols=63 Identities=24% Similarity=0.332 Sum_probs=49.7
Q ss_pred ccccchHHHHHHHHHHHcCCCEEEEec----eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCccc
Q 010623 157 RGFHNGRFVQRLREKAASLPNVRLEQG----TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN 224 (506)
Q Consensus 157 ~~i~~~~l~~~L~~~~~~~~~v~i~~~----~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~ 224 (506)
..++...+...|.+.+++. |++++.+ +|+++..+++++.+|+ +.+|+ +++||.||.|+|++|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~~~~v~gV~--t~~G~--~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFENNDVKGAV--TADGK--IWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEETTEEEEEE--ETTTE--EEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEecCCeEEEEE--ECCCC--EEECCEEEECCCCChh
Confidence 3445568899999999988 6777766 6999998888765554 56775 4679999999999985
No 53
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.35 E-value=5.4e-12 Score=129.04 Aligned_cols=153 Identities=20% Similarity=0.252 Sum_probs=93.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc--cccc---c-ccchH-HHHHHhCchhH-----Hhhccc
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGEL---L-QPGGY-LKLIELGLEDC-----VEQIDA 126 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~--~g~~---l-~~~~~-~~l~~~g~~~~-----~~~~~~ 126 (506)
+++||+|||||++|+++|+.|+++|.+|+|+||.+...... .+.. + +.... ..+..++.... +.....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 46899999999999999999999999999999986543211 0000 0 00001 11121111100 000000
Q ss_pred c------eecceEEEECCceeeeecCCcCCCCCcccccc----cchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeE
Q 010623 127 Q------RVFGYALFKDGNRTQISYPLEKFHSDVAGRGF----HNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTI 195 (506)
Q Consensus 127 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v 195 (506)
. ...+..+.. ...+..+ ....+.+.|.+.+++. +++++.++ |+++..+++++
T Consensus 105 ~~~~~~~~~~G~~~~~----------------~~~g~~~p~~~~~~~l~~~L~~~~~~~-GV~i~~~~~V~~i~~~~~~v 167 (447)
T 2i0z_A 105 EDIITFFENLGVKLKE----------------EDHGRMFPVSNKAQSVVDALLTRLKDL-GVKIRTNTPVETIEYENGQT 167 (447)
T ss_dssp HHHHHHHHHTTCCEEE----------------CGGGEEEETTCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEE
T ss_pred HHHHHHHHhcCCceEE----------------eeCCEEECCCCCHHHHHHHHHHHHHHC-CCEEEeCcEEEEEEecCCcE
Confidence 0 000111100 0011111 2457888999998886 78888875 99999887765
Q ss_pred EEEEEEeCCccEEEEEcCeEEeecCCcc-----------cchhhccCC
Q 010623 196 KGVQYKTKAGEELTAYAPLTIVCDGCFS-----------NLRRSLCNP 232 (506)
Q Consensus 196 ~~v~v~~~~G~~~~i~a~~vV~AdG~~S-----------~vR~~l~~~ 232 (506)
.+|+ ..+|+ +++||.||+|||++| .+++.++..
T Consensus 168 ~~V~--~~~G~--~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 168 KAVI--LQTGE--VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp EEEE--ETTCC--EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred EEEE--ECCCC--EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 5554 45675 477999999999999 777777764
No 54
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.32 E-value=1.6e-11 Score=128.41 Aligned_cols=154 Identities=18% Similarity=0.201 Sum_probs=95.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC-CCCcccccc---cc-cchHHHHHHhCc-hhHHhhcccceecce
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS-EPDRIVGEL---LQ-PGGYLKLIELGL-EDCVEQIDAQRVFGY 132 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~-~~~~~~g~~---l~-~~~~~~l~~~g~-~~~~~~~~~~~~~~~ 132 (506)
.++||+|||||++|+++|+.|++.|.+|+|+|+++. .....+... +. ....+.++.+|- ...... ..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d-----~~gi 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAID-----QAGI 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHH-----HHEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhh-----hccc
Confidence 369999999999999999999999999999999742 222122111 11 011222333331 111100 0111
Q ss_pred EE--EECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEE
Q 010623 133 AL--FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTA 210 (506)
Q Consensus 133 ~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i 210 (506)
.+ ...... + ........+++..+...|.+.+.+.++++++.++|+++..+++++.+|. ..+|. ++
T Consensus 102 ~f~~l~~~kg-----p----av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~--t~dG~--~I 168 (651)
T 3ces_A 102 QFRILNASKG-----P----AVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAV--TQMGL--KF 168 (651)
T ss_dssp EEEEESTTSC-----G----GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEE--ETTSE--EE
T ss_pred chhhhhcccC-----c----ccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEE--ECCCC--EE
Confidence 11 110000 0 0001113467778889999999885689997778999988878776665 45674 47
Q ss_pred EcCeEEeecCCcccchhhcc
Q 010623 211 YAPLTIVCDGCFSNLRRSLC 230 (506)
Q Consensus 211 ~a~~vV~AdG~~S~vR~~l~ 230 (506)
+||.||+|||.+|..+...+
T Consensus 169 ~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 169 RAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp EEEEEEECCSTTTCCEEECC
T ss_pred ECCEEEEcCCCCccCccccC
Confidence 79999999999998776543
No 55
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.32 E-value=1.6e-11 Score=127.48 Aligned_cols=149 Identities=21% Similarity=0.236 Sum_probs=86.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHH-----hhcccceecce
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCV-----EQIDAQRVFGY 132 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~-----~~~~~~~~~~~ 132 (506)
..++||+||||||+|+++|+.|++.|++|+|+|+.+....+. +...+.+... .... ....+.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~------------~~~~g~w~~~~~~~~~~i~-~g~gGa 171 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT------------KDTFGFWRKRTLNPESNVQ-FGEGGA 171 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH------------HHHHHHHHHCCCCTTSSSS-SSTTGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc------------cchhcccccccccccccce-eccCCc
Confidence 346899999999999999999999999999999985421110 0000000000 0000 000000
Q ss_pred EEEECCceee----------------eecCCc---CCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeC
Q 010623 133 ALFKDGNRTQ----------------ISYPLE---KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK 192 (506)
Q Consensus 133 ~~~~~~~~~~----------------~~~~~~---~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~ 192 (506)
..+.+++... ..+... .....+.........+.+.|.+.+.+. ++++++++ |+++..++
T Consensus 172 g~~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~-Gv~I~~~t~V~~I~~~~ 250 (549)
T 3nlc_A 172 GTFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIEL-GGEIRFSTRVDDLHMED 250 (549)
T ss_dssp GTTSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHT-TCEEESSCCEEEEEESS
T ss_pred ccccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEEeC
Confidence 0000000000 000000 000011111234467888899988887 78888885 99999888
Q ss_pred CeEEEEEEEeCCccEEEEEcCeEEeecCCccc
Q 010623 193 GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN 224 (506)
Q Consensus 193 ~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~ 224 (506)
+++.+|+ ..+|++ ++||+||+|+|.+|.
T Consensus 251 ~~v~gV~--l~~G~~--i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 251 GQITGVT--LSNGEE--IKSRHVVLAVGHSAR 278 (549)
T ss_dssp SBEEEEE--ETTSCE--EECSCEEECCCTTCH
T ss_pred CEEEEEE--ECCCCE--EECCEEEECCCCChh
Confidence 7766555 467763 679999999999995
No 56
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.32 E-value=2.1e-11 Score=128.71 Aligned_cols=69 Identities=14% Similarity=0.229 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEeecCCcccchhhcc
Q 010623 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNLRRSLC 230 (506)
Q Consensus 162 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~vR~~l~ 230 (506)
..+...|.+.+.+.++++++.++ |+++..+++++.+|.+.+ .+|+..+++|+.||+|||++|.++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~ 204 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNT 204 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcC
Confidence 46888999999888669999885 999998888888887765 6787667899999999999999876554
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.31 E-value=1.8e-11 Score=127.59 Aligned_cols=153 Identities=16% Similarity=0.172 Sum_probs=96.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC-CCCCcccccc---cc-cchHHHHHHhCc-hhHHhhcccceecce
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL-SEPDRIVGEL---LQ-PGGYLKLIELGL-EDCVEQIDAQRVFGY 132 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~-~~~~~~~g~~---l~-~~~~~~l~~~g~-~~~~~~~~~~~~~~~ 132 (506)
.++||+|||||++|+++|+.|++.|.+|+|+|+++ ......+... +. ....+.++.+|- ....... .+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~-----~gi 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ-----TGI 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH-----HEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhh-----ccc
Confidence 35999999999999999999999999999999974 2221111111 11 011223333432 2111110 111
Q ss_pred EE--EECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEE
Q 010623 133 AL--FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTA 210 (506)
Q Consensus 133 ~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i 210 (506)
.+ ...... .........+++..+...|.+.+.+.++++++.++|+++..+++++.+|. +.+|. ++
T Consensus 101 ~f~~l~~~kG---------pav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~--t~dG~--~i 167 (637)
T 2zxi_A 101 QFKMLNTRKG---------KAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVR--TNLGV--EY 167 (637)
T ss_dssp EEEEESTTSC---------GGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEE--ETTSC--EE
T ss_pred ceeecccccC---------ccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEE--ECCCc--EE
Confidence 11 110000 00001112457778899999999886689997778999988888776665 46775 46
Q ss_pred EcCeEEeecCCcccchhhc
Q 010623 211 YAPLTIVCDGCFSNLRRSL 229 (506)
Q Consensus 211 ~a~~vV~AdG~~S~vR~~l 229 (506)
+||.||+|||.++..+...
T Consensus 168 ~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 168 KTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp ECSEEEECCTTCBTCEEEE
T ss_pred EeCEEEEccCCCccCceec
Confidence 7999999999998766543
No 58
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.31 E-value=7.3e-12 Score=131.87 Aligned_cols=164 Identities=19% Similarity=0.253 Sum_probs=96.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc--cccccccchHHHHHHhCchhH----------------
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGELLQPGGYLKLIELGLEDC---------------- 120 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~--~g~~l~~~~~~~l~~~g~~~~---------------- 120 (506)
.++||+|||||++|+++|+.|++.|++|+|+||.+...... .+..++.......++.|+.+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999987544321 111111100000111111100
Q ss_pred ----Hhhcc--------cceecceEEEECCceeeeec-CCcCCCCC--cccccccchHHHHHHHHHHHcCCCEEEEece-
Q 010623 121 ----VEQID--------AQRVFGYALFKDGNRTQISY-PLEKFHSD--VAGRGFHNGRFVQRLREKAASLPNVRLEQGT- 184 (506)
Q Consensus 121 ----~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~- 184 (506)
+..+. .....+..+. .... ........ +.........+...|.+.+.+. +++++.++
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~------~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~t~ 277 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMT------DVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLNSR 277 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCC------EEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccc------cccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHc-CCeEEecCE
Confidence 00000 0000011000 0000 00000000 0001123456888999999887 78998885
Q ss_pred EEEEEeeC-CeEEEEEEEeCCccEEEEEcCeEEeecCCcccchhhc
Q 010623 185 VTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSL 229 (506)
Q Consensus 185 v~~~~~~~-~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~~l 229 (506)
|+++..++ +++.+|++.+.+|+..+++||.||.|+|++|..++++
T Consensus 278 v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 278 VVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp EEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred EEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 99998777 8888898877778777789999999999999865544
No 59
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.31 E-value=7.5e-11 Score=122.43 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccchhhccC
Q 010623 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCN 231 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~~l~~ 231 (506)
.+.+.|.+.+++. |++++.++ |+++..+++++++|+ ++||++ ++||.||.+.+.....++.+..
T Consensus 222 ~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~~~~~~gV~--~~~g~~--~~ad~VV~~a~~~~~~~~Ll~~ 286 (501)
T 4dgk_A 222 ALVQGMIKLFQDL-GGEVVLNARVSHMETTGNKIEAVH--LEDGRR--FLTQAVASNADVVHTYRDLLSQ 286 (501)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCE--EECSCEEECCC-----------
T ss_pred chHHHHHHHHHHh-CCceeeecceeEEEeeCCeEEEEE--ecCCcE--EEcCEEEECCCHHHHHHHhccc
Confidence 4667788888888 67787775 999999999887766 578875 5699999988888777766643
No 60
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.30 E-value=1.4e-10 Score=117.70 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccch
Q 010623 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLR 226 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR 226 (506)
.+.+.|.+.+.+. |++++.++ |+++..+++++++|+. +|+ +++||.||.|.|.+...+
T Consensus 197 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~gv~~---~g~--~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 197 GIIDALETVISAN-GGKIHTGQEVSKILIENGKAAGIIA---DDR--IHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEEE---TTE--EEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHc-CCEEEECCceeEEEEECCEEEEEEE---CCE--EEECCEEEECCCHHHHHH
Confidence 4677788888887 67888775 9999998887766653 354 467999999999987643
No 61
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.30 E-value=2.8e-11 Score=126.58 Aligned_cols=154 Identities=23% Similarity=0.255 Sum_probs=94.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC-CCCccccccccc-chHHHHHHh---C-chhHHhhcccceecc
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS-EPDRIVGELLQP-GGYLKLIEL---G-LEDCVEQIDAQRVFG 131 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~-~~~~~~g~~l~~-~~~~~l~~~---g-~~~~~~~~~~~~~~~ 131 (506)
+.++||+|||||++|+++|+.|++.|.+|+|+|+.+. .....+...... ....+++++ + +...... . ....
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d--~-~gi~ 95 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAID--A-TGIQ 95 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHH--H-HEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHH--h-cCCc
Confidence 3469999999999999999999999999999999742 222111111110 011233332 2 1111100 0 0000
Q ss_pred eEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEE
Q 010623 132 YALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAY 211 (506)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~ 211 (506)
+........ + ........+++..+...|.+.+.+.++++++.++|+++..+++++.+|. ..+|+ +++
T Consensus 96 f~~l~~~kg-----p----av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~--t~~G~--~i~ 162 (641)
T 3cp8_A 96 FRMLNRSKG-----P----AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVT--VRSGR--AIQ 162 (641)
T ss_dssp EEEECSSSC-----T----TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSC--EEE
T ss_pred hhhcccccC-----c----cccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEE--ECCCc--EEE
Confidence 111111100 0 0011123567888999999999887789998778999988888776665 46675 467
Q ss_pred cCeEEeecCCcccchh
Q 010623 212 APLTIVCDGCFSNLRR 227 (506)
Q Consensus 212 a~~vV~AdG~~S~vR~ 227 (506)
||.||+|||.++..+.
T Consensus 163 Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 163 AKAAILACGTFLNGLI 178 (641)
T ss_dssp EEEEEECCTTCBTCEE
T ss_pred eCEEEECcCCCCCccc
Confidence 9999999999976443
No 62
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.28 E-value=2.6e-11 Score=107.77 Aligned_cols=117 Identities=26% Similarity=0.352 Sum_probs=84.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....+. . . +.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~--~-------------~----~~------------------ 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV--S-------------R----VP------------------ 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC--S-------------C----CC------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc--h-------------h----hh------------------
Confidence 699999999999999999999999999999986211100 0 0 00
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecC
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDG 220 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG 220 (506)
.++ ... ..+....+.+.+.+.+++. +++++.++|+++..+++. +.+.+++| ++++|+||.|+|
T Consensus 45 ---~~~--~~~-----~~~~~~~~~~~l~~~~~~~-gv~v~~~~v~~i~~~~~~---~~v~~~~g---~i~ad~vI~A~G 107 (180)
T 2ywl_A 45 ---NYP--GLL-----DEPSGEELLRRLEAHARRY-GAEVRPGVVKGVRDMGGV---FEVETEEG---VEKAERLLLCTH 107 (180)
T ss_dssp ---CST--TCT-----TCCCHHHHHHHHHHHHHHT-TCEEEECCCCEEEECSSS---EEEECSSC---EEEEEEEEECCT
T ss_pred ---ccC--CCc-----CCCCHHHHHHHHHHHHHHc-CCEEEeCEEEEEEEcCCE---EEEEECCC---EEEECEEEECCC
Confidence 000 000 0134557888888888887 688887788888876654 44556677 467999999999
Q ss_pred CcccchhhccC
Q 010623 221 CFSNLRRSLCN 231 (506)
Q Consensus 221 ~~S~vR~~l~~ 231 (506)
.++.+++.+++
T Consensus 108 ~~~~~~~~~g~ 118 (180)
T 2ywl_A 108 KDPTLPSLLGL 118 (180)
T ss_dssp TCCHHHHHHTC
T ss_pred CCCCccccCCC
Confidence 99988777654
No 63
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.26 E-value=4.8e-11 Score=122.06 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=51.7
Q ss_pred cccchHHHHHHHHHHHcCCCEEEEec-eEEEEEe---------------eCCeEEEEEEEeCCccEEEE--EcCeEEeec
Q 010623 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLE---------------EKGTIKGVQYKTKAGEELTA--YAPLTIVCD 219 (506)
Q Consensus 158 ~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~---------------~~~~v~~v~v~~~~G~~~~i--~a~~vV~Ad 219 (506)
.++...+...|.+.+.+. |++++.+ +|+++.. +++++.+| .+.+|+ + +||.||.|+
T Consensus 177 ~~~~~~l~~~L~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V--~t~~g~---i~~~Ad~VV~At 250 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGA-GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAA--VLSDGT---RVEVGEKLVVAA 250 (448)
T ss_dssp ECCHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEE--EETTSC---EEEEEEEEEECC
T ss_pred EEcHHHHHHHHHHHHHhC-CCEEEcCCeEEEEEecccccccccccccccCCCceEEE--EeCCCE---EeecCCEEEECC
Confidence 456668899999999887 6888876 5999987 45544444 456673 6 799999999
Q ss_pred CCccc-chhhccCC
Q 010623 220 GCFSN-LRRSLCNP 232 (506)
Q Consensus 220 G~~S~-vR~~l~~~ 232 (506)
|.+|. +.+.++..
T Consensus 251 G~~s~~l~~~~g~~ 264 (448)
T 3axb_A 251 GVWSNRLLNPLGID 264 (448)
T ss_dssp GGGHHHHHGGGTCC
T ss_pred CcCHHHHHHHcCCC
Confidence 99986 66666554
No 64
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.25 E-value=3.1e-11 Score=121.81 Aligned_cols=167 Identities=16% Similarity=0.060 Sum_probs=90.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcc--ccc-cc-ccch------HHHHHHhCchhHHhhc---
Q 010623 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRI--VGE-LL-QPGG------YLKLIELGLEDCVEQI--- 124 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~--~g~-~l-~~~~------~~~l~~~g~~~~~~~~--- 124 (506)
++||+|||||++|+++|+.|+++ |++|+|+|+.......+ .+. .+ .+.. ....+.+.++......
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999999999 99999999975433221 111 12 1111 0111122222210000
Q ss_pred ccceecceEEEEC-----C----ceeeeecCC-------cCCC---CCcccccccchHHHHHHHHHHHcCCCEEEEec-e
Q 010623 125 DAQRVFGYALFKD-----G----NRTQISYPL-------EKFH---SDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-T 184 (506)
Q Consensus 125 ~~~~~~~~~~~~~-----~----~~~~~~~~~-------~~~~---~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~ 184 (506)
......+...... + ......++. .... ..+....++...+...|.+.+.+. +++++++ +
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~-Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQ-GAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTT-TCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHC-CCEEEcCCE
Confidence 0000111111000 0 000000000 0000 011223456778999999999987 7788776 4
Q ss_pred EE---------EEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc-cchh-hccCCC
Q 010623 185 VT---------SLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRR-SLCNPK 233 (506)
Q Consensus 185 v~---------~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S-~vR~-~l~~~~ 233 (506)
|+ ++..+++++ .+.+.+| +++||.||+|+|.+| .+++ .++...
T Consensus 195 v~~~~g~~~~~~i~~~~~~v---~v~~~~g---~i~a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQ---IVVHETR---QIRAGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp EEEETTEEEEECBCC----------CBCCE---EEEEEEEEECCGGGHHHHHHHHHCCCC
T ss_pred EEeccccccccceEeeCCeE---EEEECCc---EEECCEEEECCCccHHHHHHHhcCCCC
Confidence 88 887666643 3445555 477999999999999 6877 777643
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.25 E-value=9.4e-12 Score=125.08 Aligned_cols=142 Identities=18% Similarity=0.177 Sum_probs=83.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccc---ccc--cccc--------------hHHHHHHhCchh
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV---GEL--LQPG--------------GYLKLIELGLED 119 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~---g~~--l~~~--------------~~~~l~~~g~~~ 119 (506)
.++||+|||||++|+++|+.|+++|.+|+|+||++....... +.. +... ....+..+...+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 358999999999999999999999999999999875422110 000 0000 001111111111
Q ss_pred HHhhcccceecceEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee----CCe
Q 010623 120 CVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE----KGT 194 (506)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~----~~~ 194 (506)
.+.... ..+..+...... ..++ .. +...+.+.|.+.+++. +++++.++ |+++..+ +++
T Consensus 83 ~~~~~~---~~Gi~~~~~~~g--~~~p----------~~-~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~~~g~~~~ 145 (401)
T 2gqf_A 83 FISLVA---EQGITYHEKELG--QLFC----------DE-GAEQIVEMLKSECDKY-GAKILLRSEVSQVERIQNDEKVR 145 (401)
T ss_dssp HHHHHH---HTTCCEEECSTT--EEEE----------TT-CTHHHHHHHHHHHHHH-TCEEECSCCEEEEEECCSCSSCC
T ss_pred HHHHHH---hCCCceEECcCC--EEcc----------CC-CHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEcccCcCCCe
Confidence 111100 011111100000 0000 01 4567888888888876 78888885 9999866 443
Q ss_pred EEEEEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 195 IKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 195 v~~v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
+.+.+.+| +++||.||.|+|.+|
T Consensus 146 ---~~v~~~~g---~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 146 ---FVLQVNST---QWQCKNLIVATGGLS 168 (401)
T ss_dssp ---EEEEETTE---EEEESEEEECCCCSS
T ss_pred ---EEEEECCC---EEECCEEEECCCCcc
Confidence 44556666 477999999999999
No 66
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.25 E-value=3.5e-10 Score=114.65 Aligned_cols=59 Identities=14% Similarity=0.153 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccchhhcc
Q 010623 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLC 230 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~~l~ 230 (506)
.+.+.|.+.+++. |++++.++ |+++..+++++ + ..+|+ +++||.||.|.|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~v----V-~~~g~--~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMEN-KGKILTRKEVVEINIEEKKV----Y-TRDNE--EYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTT-TCEEESSCCEEEEETTTTEE----E-ETTCC--EEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHC-CCEEEcCCeEEEEEEECCEE----E-EeCCc--EEEeCEEEECCCHHHHH-HhcC
Confidence 5667778888887 67888885 99999887754 3 34565 36799999999988654 3443
No 67
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.24 E-value=1.5e-10 Score=115.02 Aligned_cols=37 Identities=41% Similarity=0.644 Sum_probs=34.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+.++||+|||||++|+++|+.|+++|++|+|+||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 3568999999999999999999999999999999753
No 68
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.24 E-value=1.2e-10 Score=119.71 Aligned_cols=62 Identities=21% Similarity=0.302 Sum_probs=47.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC------CcEEEEecCCCCCCcccc-----------c----ccccchHHHHHHhCch
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG------RRVHVIERDLSEPDRIVG-----------E----LLQPGGYLKLIELGLE 118 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G------~~v~vvE~~~~~~~~~~g-----------~----~l~~~~~~~l~~~g~~ 118 (506)
.+||+|||||++||++|+.|+++| ++|+|+|+++....+..+ . ...+...++++++|+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCCc
Confidence 479999999999999999999999 999999998654432111 0 1234556788899887
Q ss_pred hHH
Q 010623 119 DCV 121 (506)
Q Consensus 119 ~~~ 121 (506)
+.+
T Consensus 85 ~~~ 87 (470)
T 3i6d_A 85 HLL 87 (470)
T ss_dssp TTE
T ss_pred cee
Confidence 544
No 69
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.23 E-value=9e-11 Score=123.89 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEeecCCcccc
Q 010623 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 162 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
..+...|.+.+.+. +++++.++ |+++..+++++.+|.+.+ .+|+..+++|+.||.|+|++|.+
T Consensus 155 ~~l~~~L~~~~~~~-gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRY-DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTS-CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 36888999998876 78888885 999998888898988876 67877789999999999999975
No 70
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.22 E-value=3.3e-11 Score=125.76 Aligned_cols=65 Identities=22% Similarity=0.203 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEece-EEEEEe-eCC------eEEEEEEEe-CCccEEEEEcCeEEeecCCcccch
Q 010623 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLE-EKG------TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNLR 226 (506)
Q Consensus 162 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~-~~~------~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~vR 226 (506)
..+...|.+.+.+..+++++.++ |+++.. +++ ++.+|.+.+ .+|+..+++|+.||.|+|++|.+-
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 35677788888875589999885 999987 445 788888876 477767789999999999999763
No 71
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.21 E-value=2.9e-11 Score=120.39 Aligned_cols=158 Identities=19% Similarity=0.204 Sum_probs=89.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccc--c-c-cccc-----c-hH-HHHHHhCchhHHhhccc--
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV--G-E-LLQP-----G-GY-LKLIELGLEDCVEQIDA-- 126 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~--g-~-~l~~-----~-~~-~~l~~~g~~~~~~~~~~-- 126 (506)
++||+|||||++|+++|+.|+++|++|+|+|+.+....... + . .+.. . .. ...+.+.+++.+.....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 58999999999999999999999999999999864321110 0 0 1110 0 00 11122222322221000
Q ss_pred --ceecceE-EEECCc-----------------------eeeeecCCcCCCC------CcccccccchHHHHHHHHHHHc
Q 010623 127 --QRVFGYA-LFKDGN-----------------------RTQISYPLEKFHS------DVAGRGFHNGRFVQRLREKAAS 174 (506)
Q Consensus 127 --~~~~~~~-~~~~~~-----------------------~~~~~~~~~~~~~------~~~~~~i~~~~l~~~L~~~~~~ 174 (506)
....+.. +..... .....+|.-.... .+....++...+.+.|.+.+.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 161 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE 161 (372)
T ss_dssp CSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHH
T ss_pred cceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHH
Confidence 0011111 111100 0000011000000 1122345666888999999988
Q ss_pred CCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCccc
Q 010623 175 LPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN 224 (506)
Q Consensus 175 ~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~ 224 (506)
. +++++.+ +|+++..++++ +.+.+.+|+ ++||.||.|+|.+|.
T Consensus 162 ~-G~~i~~~~~V~~i~~~~~~---~~v~~~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 162 A-GCAQLFNCPVTAIRHDDDG---VTIETADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp T-TCEEECSCCEEEEEECSSS---EEEEESSCE---EEEEEEEECCGGGGG
T ss_pred C-CCEEEcCCEEEEEEEcCCE---EEEEECCCe---EEcCEEEEcCCccHH
Confidence 7 6788877 59999887664 445566663 679999999999984
No 72
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.21 E-value=1.5e-10 Score=111.24 Aligned_cols=114 Identities=18% Similarity=0.300 Sum_probs=83.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.+||+|||||++|+++|..|+++|++|+|+|+.+.. +. +.. .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----~~-~~~---------------------~----------- 43 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR-----NR-FAS---------------------H----------- 43 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG-----GG-GCS---------------------C-----------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc-----cc-cch---------------------h-----------
Confidence 489999999999999999999999999999997410 00 000 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
...++ ........++...+.+.+.+.+++.+..++|+++..+++. +.+...+|+ ++++|.||.|+
T Consensus 44 --~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~vviAt 108 (297)
T 3fbs_A 44 --SHGFL--------GQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE---FIVEIDGGR--RETAGRLILAM 108 (297)
T ss_dssp --CCSST--------TCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE---EEEEETTSC--EEEEEEEEECC
T ss_pred --hcCCc--------CCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe---EEEEECCCC--EEEcCEEEECC
Confidence 00000 0012345678888888888887899888889999888774 456677776 46699999999
Q ss_pred CCcccch
Q 010623 220 GCFSNLR 226 (506)
Q Consensus 220 G~~S~vR 226 (506)
|..+...
T Consensus 109 G~~~~~~ 115 (297)
T 3fbs_A 109 GVTDELP 115 (297)
T ss_dssp CCEEECC
T ss_pred CCCCCCC
Confidence 9976543
No 73
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.21 E-value=1.1e-10 Score=123.06 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEece-EEEEEee-CCeEEEEEEEe-CCccEEEEEcCeEEeecCCcccc
Q 010623 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 162 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
..+...|.+.+.+. +++++.++ |+++..+ ++++.+|.+.+ .+|+..+++|+.||.|+|++|.+
T Consensus 143 ~~l~~~L~~~~~~~-gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 46788899998887 78898885 9999986 67888888875 67877778999999999999865
No 74
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.18 E-value=1.6e-10 Score=111.73 Aligned_cols=114 Identities=16% Similarity=0.216 Sum_probs=76.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
+++|||+||||||+|++||+.|+|.|++|+|+|+... .| .+.. .+ .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-----gg-~~~~----------------~~-----~------- 49 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-----RN-RVTQ----------------NS-----H------- 49 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-----GG-GGSS----------------CB-----C-------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-----CC-eeee----------------ec-----C-------
Confidence 3469999999999999999999999999999998731 11 1100 00 0
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
.+.. ...+...++.+...+.+.+.+++.+...+++.+...+++. .++.+.+|++ +++|.||.
T Consensus 50 ------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~g~~--~~a~~lii 111 (304)
T 4fk1_A 50 ------GFIT--------RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL--FEIVTKDHTK--YLAERVLL 111 (304)
T ss_dssp ------CSTT--------CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC--EEEEETTCCE--EEEEEEEE
T ss_pred ------CccC--------CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc--EEEEECCCCE--EEeCEEEE
Confidence 0000 0012334566667777777778888888877776654432 3455677864 56999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|+|...
T Consensus 112 ATGs~p 117 (304)
T 4fk1_A 112 ATGMQE 117 (304)
T ss_dssp CCCCEE
T ss_pred ccCCcc
Confidence 999754
No 75
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.17 E-value=9.6e-11 Score=116.19 Aligned_cols=126 Identities=17% Similarity=0.140 Sum_probs=84.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
+..+||+||||||+|+++|+.|++.|++|+|+|+.+... | ... .. .... ..+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g----g-------~~~--~~--------~~~~-----~~~~- 64 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG----G-------QLA--AL--------YPEK-----HIYD- 64 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----H-------HHH--HT--------CTTS-----EECC-
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC----C-------ccc--cc--------CCCc-----cccc-
Confidence 346899999999999999999999999999999985421 1 000 00 0000 0000
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
.+ . ...+.+..+...|.+.+.+. ++.++.+ +|+++..++++ .+++.+.+|++ +++|+||
T Consensus 65 -------~~--~------~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~~--~~~~~li 124 (360)
T 3ab1_A 65 -------VA--G------FPEVPAIDLVESLWAQAERY-NPDVVLNETVTKYTKLDDG--TFETRTNTGNV--YRSRAVL 124 (360)
T ss_dssp -------ST--T------CSSEEHHHHHHHHHHHHHTT-CCEEECSCCEEEEEECTTS--CEEEEETTSCE--EEEEEEE
T ss_pred -------CC--C------CCCCCHHHHHHHHHHHHHHh-CCEEEcCCEEEEEEECCCc--eEEEEECCCcE--EEeeEEE
Confidence 00 0 00134567888888888877 6777776 59999876542 24455677753 6799999
Q ss_pred eecCCcccchhhcc
Q 010623 217 VCDGCFSNLRRSLC 230 (506)
Q Consensus 217 ~AdG~~S~vR~~l~ 230 (506)
.|+|.+|..++.+.
T Consensus 125 ~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 125 IAAGLGAFEPRKLP 138 (360)
T ss_dssp ECCTTCSCCBCCCG
T ss_pred EccCCCcCCCCCCC
Confidence 99999886655544
No 76
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.16 E-value=1.6e-10 Score=113.32 Aligned_cols=124 Identities=21% Similarity=0.241 Sum_probs=83.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+|||||++|+++|+.|++.|++|+|+|+++... | .. . .. .... .++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g----g-------~~-~-~~--------~~~~-----~~~~--- 55 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG----G-------QL-T-AL--------YPEK-----YIYD--- 55 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC----H-------HH-H-HT--------CTTS-----EECC---
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC----C-------ee-e-cc--------CCCc-----eeec---
Confidence 5899999999999999999999999999999985321 1 00 0 00 0000 0000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.+ .+ ..+.+.++...|.+.+.+. ++.++.+ +|+++..+++ .+++.+.+|++ +++|.||.|
T Consensus 56 -----~~--~~------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~---~~~v~~~~g~~--~~~~~lv~A 116 (335)
T 2zbw_A 56 -----VA--GF------PKVYAKDLVKGLVEQVAPF-NPVYSLGERAETLEREGD---LFKVTTSQGNA--YTAKAVIIA 116 (335)
T ss_dssp -----ST--TC------SSEEHHHHHHHHHHHHGGG-CCEEEESCCEEEEEEETT---EEEEEETTSCE--EEEEEEEEC
T ss_pred -----cC--CC------CCCCHHHHHHHHHHHHHHc-CCEEEeCCEEEEEEECCC---EEEEEECCCCE--EEeCEEEEC
Confidence 00 00 0134566778888888776 5677666 5999988766 35566677753 669999999
Q ss_pred cCCcccchhhccC
Q 010623 219 DGCFSNLRRSLCN 231 (506)
Q Consensus 219 dG~~S~vR~~l~~ 231 (506)
+|.+|...+...+
T Consensus 117 tG~~~~~p~~~~i 129 (335)
T 2zbw_A 117 AGVGAFEPRRIGA 129 (335)
T ss_dssp CTTSEEEECCCCC
T ss_pred CCCCCCCCCCCCC
Confidence 9998766554443
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.14 E-value=2.3e-10 Score=112.85 Aligned_cols=129 Identities=16% Similarity=0.173 Sum_probs=82.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+|||||++|+++|+.|+++|++|+|+|+.+..... .. +. ++.+. ......
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~-----~~-~~---------~~~~~-----------~~~~~~ 56 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA-----WQ-HA---------WHSLH-----------LFSPAG 56 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG-----GG-GS---------CTTCB-----------CSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc-----cc-CC---------CCCcE-----------ecCchh
Confidence 489999999999999999999999999999998643211 00 00 00000 000000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEE-EEeCCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQ-YKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~-v~~~~G~~~~i~a~~vV~ 217 (506)
...++..... .......++..+.+.|.+.+.+. +++++.+ +|+++..+++. +. +.+.+| ++++|.||.
T Consensus 57 --~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~~v~~~~g---~~~~d~vV~ 126 (357)
T 4a9w_A 57 --WSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHFGER---LRVVARDGR---QWLARAVIS 126 (357)
T ss_dssp --GSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEETTE---EEEEETTSC---EEEEEEEEE
T ss_pred --hhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEECCCc---EEEEEeCCC---EEEeCEEEE
Confidence 0000000000 01112345678888898888887 6778877 59999988774 45 656666 467999999
Q ss_pred ecCCccc
Q 010623 218 CDGCFSN 224 (506)
Q Consensus 218 AdG~~S~ 224 (506)
|+|.+|.
T Consensus 127 AtG~~~~ 133 (357)
T 4a9w_A 127 ATGTWGE 133 (357)
T ss_dssp CCCSGGG
T ss_pred CCCCCCC
Confidence 9999874
No 78
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.14 E-value=1.7e-10 Score=122.63 Aligned_cols=66 Identities=21% Similarity=0.176 Sum_probs=52.7
Q ss_pred cchHHHHHHHHHHHcC-CCEEEEece-EEEEEeeCC---eEEEEEEEe-CCccEEEEEcCeEEeecCCcccc
Q 010623 160 HNGRFVQRLREKAASL-PNVRLEQGT-VTSLLEEKG---TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 160 ~~~~l~~~L~~~~~~~-~~v~i~~~~-v~~~~~~~~---~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
+...+...|.+.+.+. ++++++.++ ++++..+++ ++.||.+.+ .+|+..+++|+.||.|+|+++.+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 3456788888888775 378888775 899888776 899988765 57877789999999999999964
No 79
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.14 E-value=8.9e-10 Score=108.39 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEecCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSE 95 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~---~G~~v~vvE~~~~~ 95 (506)
.||+|||||++|+++|+.|++ .|++|+|+||++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 589999999999999999999 99999999998643
No 80
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.13 E-value=1.4e-10 Score=113.73 Aligned_cols=123 Identities=17% Similarity=0.231 Sum_probs=81.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
.++.+||+|||||++|+++|+.|+++|++|+|+|+.+.......|. +.... .
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~-~~~~~-------------------~-------- 70 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQ-LTTTT-------------------E-------- 70 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GGGSS-------------------E--------
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcc-cccch-------------------h--------
Confidence 3456999999999999999999999999999999975211111111 10000 0
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEe---CCccEEEEEcC
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKT---KAGEELTAYAP 213 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~---~~G~~~~i~a~ 213 (506)
...++ . ....+.+..+...|.+.+.+. +++++.++|+++..+++.+ .+.. .++. ++++|
T Consensus 71 -----~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~-gv~i~~~~v~~i~~~~~~~---~v~~~~~~~~~--~~~~d 132 (338)
T 3itj_A 71 -----IENFP--G-----FPDGLTGSELMDRMREQSTKF-GTEIITETVSKVDLSSKPF---KLWTEFNEDAE--PVTTD 132 (338)
T ss_dssp -----ECCST--T-----CTTCEEHHHHHHHHHHHHHHT-TCEEECSCEEEEECSSSSE---EEEETTCSSSC--CEEEE
T ss_pred -----hcccC--C-----CcccCCHHHHHHHHHHHHHHc-CCEEEEeEEEEEEEcCCEE---EEEEEecCCCc--EEEeC
Confidence 00010 0 011245667888888888887 7888888888988776643 3434 2444 46699
Q ss_pred eEEeecCCcccc
Q 010623 214 LTIVCDGCFSNL 225 (506)
Q Consensus 214 ~vV~AdG~~S~v 225 (506)
.||.|+|..+..
T Consensus 133 ~vvlAtG~~~~~ 144 (338)
T 3itj_A 133 AIILATGASAKR 144 (338)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECcCCCcCC
Confidence 999999987643
No 81
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.10 E-value=5.3e-10 Score=118.85 Aligned_cols=62 Identities=15% Similarity=0.325 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEeecCCcccc
Q 010623 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
.+...|.+.+.+. +++++.++ |+++..+++++.+|.+.+ .+|+..+++|+.||.|+|+++.+
T Consensus 159 ~l~~~L~~~a~~~-gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5788888888876 78888885 999998888888888765 67877778999999999999965
No 82
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.10 E-value=2.6e-10 Score=117.19 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccchhh
Q 010623 161 NGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRS 228 (506)
Q Consensus 161 ~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR~~ 228 (506)
...+...|.+.+++. +++++.++ | ++..+++++.++.+.+.+|+ ++||.||.|+|++|.++..
T Consensus 118 g~~l~~~L~~~~~~~-gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~---~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 118 GREIFNFLLKLAREE-GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV---EDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHHT-TCCEECCCEE-EEEEETTEEEEEEETTTEEE---CCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhC-CCEEEECcEE-EEEEeCCEEEEEEEEeCCCe---EEeeeEEECCCCCcccCcc
Confidence 346778888888655 78888886 8 99888888888877554443 5699999999999988754
No 83
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.09 E-value=7.7e-10 Score=107.14 Aligned_cols=115 Identities=18% Similarity=0.278 Sum_probs=80.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
+||+||||||+|+++|+.|++.|+ +|+|+|++. . .|...... ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~----gg~~~~~~---------------~~--------------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-P----GGQITGSS---------------EI--------------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-T----TCGGGGCS---------------CB---------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-C----Cccccccc---------------cc---------------
Confidence 699999999999999999999999 999999962 1 11111100 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
..++ . ....+++..+.+.|.+.+.+. +++++.++|+++..+++. +++...+|+ ++++|+||.|+
T Consensus 47 ---~~~~--~-----~~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~~~vv~At 110 (311)
T 2q0l_A 47 ---ENYP--G-----VKEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH---FVILAEDGK--TFEAKSVIIAT 110 (311)
T ss_dssp ---CCST--T-----CCSCBCHHHHHHHHHHHHHTT-SCEEECSCEEEEEEETTE---EEEEETTSC--EEEEEEEEECC
T ss_pred ---ccCC--C-----CcccCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEEcCCE---EEEEEcCCC--EEECCEEEECC
Confidence 0000 0 001345667888888888877 788877779999887763 445456776 46799999999
Q ss_pred CCcccch
Q 010623 220 GCFSNLR 226 (506)
Q Consensus 220 G~~S~vR 226 (506)
|.++...
T Consensus 111 G~~~~~~ 117 (311)
T 2q0l_A 111 GGSPKRT 117 (311)
T ss_dssp CEEECCC
T ss_pred CCCCCCC
Confidence 9877554
No 84
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.09 E-value=8.9e-11 Score=125.11 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=50.6
Q ss_pred chHHHHHHHHHHHcCCCE-EEEece-EEEEEeeCC---eEEEEEEEe-CCccEEEEEcCeEEeecCCcccc
Q 010623 161 NGRFVQRLREKAASLPNV-RLEQGT-VTSLLEEKG---TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 161 ~~~l~~~L~~~~~~~~~v-~i~~~~-v~~~~~~~~---~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
...+...|.+.+.+.+++ +++.++ |+++..+++ ++.||.+.+ .+|+..+++|+.||.|+|++|..
T Consensus 150 g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp ETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 345677777777765367 788775 999998777 899988754 67776678999999999999964
No 85
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.08 E-value=6.4e-10 Score=122.39 Aligned_cols=70 Identities=26% Similarity=0.319 Sum_probs=53.0
Q ss_pred ccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccc-hhhccCC
Q 010623 157 RGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL-RRSLCNP 232 (506)
Q Consensus 157 ~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~v-R~~l~~~ 232 (506)
..++...+...|.+.+.+. |++++.+ +|+++..+++++.+|+ +.+| +++||.||.|+|.+|.. .+.++..
T Consensus 146 g~v~p~~l~~~L~~~a~~~-Gv~i~~~t~V~~i~~~~~~v~~V~--t~~G---~i~Ad~VV~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESA-GVTYRGSTTVTGIEQSGGRVTGVQ--TADG---VIPADIVVSCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTE---EEECSEEEECCGGGHHHHHHTTTCC
T ss_pred ceEcHHHHHHHHHHHHHHc-CCEEECCceEEEEEEeCCEEEEEE--ECCc---EEECCEEEECCccchHHHHHHhCCC
Confidence 3457778999999999988 6888876 5999998888655443 5666 47799999999999953 3445543
No 86
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.07 E-value=8.9e-10 Score=107.18 Aligned_cols=116 Identities=23% Similarity=0.301 Sum_probs=78.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
|+.++||+||||||+|+++|+.|+++|++|+|+|+.. . .|...... ..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~~~~~~---------------~~------------ 60 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A----GGLTAEAP---------------LV------------ 60 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T----TGGGGGCS---------------CB------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C----Cccccccc---------------hh------------
Confidence 4557999999999999999999999999999999952 1 11100000 00
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
..++ .+ ..+.+..+...+.+.+.+. +++++.++|+++..+++. +++.. +++ ++++|+||
T Consensus 61 ------~~~~--~~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~-~~~--~~~~~~li 119 (319)
T 3cty_A 61 ------ENYL--GF------KSIVGSELAKLFADHAANY-AKIREGVEVRSIKKTQGG---FDIET-NDD--TYHAKYVI 119 (319)
T ss_dssp ------CCBT--TB------SSBCHHHHHHHHHHHHHTT-SEEEETCCEEEEEEETTE---EEEEE-SSS--EEEEEEEE
T ss_pred ------hhcC--CC------cccCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEEeCCE---EEEEE-CCC--EEEeCEEE
Confidence 0000 00 1234456777888888877 788888779999877664 33444 444 36799999
Q ss_pred eecCCcccc
Q 010623 217 VCDGCFSNL 225 (506)
Q Consensus 217 ~AdG~~S~v 225 (506)
.|+|.++..
T Consensus 120 ~AtG~~~~~ 128 (319)
T 3cty_A 120 ITTGTTHKH 128 (319)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCccc
Confidence 999987643
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.07 E-value=7.3e-10 Score=107.69 Aligned_cols=113 Identities=19% Similarity=0.131 Sum_probs=78.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+.+||+|||||++|+++|+.|+++|++|+|+|++ . |..+.. . .
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~-----gg~~~~----------------~-~------------- 56 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P-----GGQLTE----------------A-G------------- 56 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T-----TGGGGG----------------C-C-------------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C-----CCeecc----------------c-c-------------
Confidence 4589999999999999999999999999999997 1 111110 0 0
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....++ .. ..+....+...+.+.+.+. +++++.++|+++..+++. +.+...+|+ ++++|.||.|
T Consensus 57 --~~~~~~--~~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~lvlA 120 (323)
T 3f8d_A 57 --IVDDYL--GL------IEIQASDMIKVFNKHIEKY-EVPVLLDIVEKIENRGDE---FVVKTKRKG--EFKADSVILG 120 (323)
T ss_dssp --EECCST--TS------TTEEHHHHHHHHHHHHHTT-TCCEEESCEEEEEEC--C---EEEEESSSC--EEEEEEEEEC
T ss_pred --cccccC--CC------CCCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEecCCE---EEEEECCCC--EEEcCEEEEC
Confidence 000001 00 0134567888888888887 677777779999877653 445567766 4669999999
Q ss_pred cCCccc
Q 010623 219 DGCFSN 224 (506)
Q Consensus 219 dG~~S~ 224 (506)
+|....
T Consensus 121 tG~~~~ 126 (323)
T 3f8d_A 121 IGVKRR 126 (323)
T ss_dssp CCCEEC
T ss_pred cCCCCc
Confidence 998854
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.06 E-value=7.7e-10 Score=113.04 Aligned_cols=158 Identities=18% Similarity=0.211 Sum_probs=84.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecc-----
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG----- 131 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~----- 131 (506)
..+||+||||||+|+++|..|++.|. +|+|+|+.+..... ........ ..+++..........+...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~----~~~~~~~~--~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGV----WNYTSTLS--NKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTT----CSCCSCCC--SCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCe----ecCCCCCC--cccccccccccccccccccccccC
Confidence 35899999999999999999999999 99999998543211 00000000 0000000000000000000
Q ss_pred ---eEEEE----CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEe-
Q 010623 132 ---YALFK----DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT- 202 (506)
Q Consensus 132 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~- 202 (506)
...+. +.......++...+.. ......++..+.+.|.+.+.+. +..++++ +|+++..+++.+. |++.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~~~~~-V~~~~~ 155 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKP-QTLQFPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKDGSWV-VTYKGT 155 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCT-TCCSSCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEETTEEE-EEEEES
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCCCeEE-EEEeec
Confidence 00000 0000000010000000 1112356778889998888876 4556666 4999988777533 55443
Q ss_pred CCcc-EEEEEcCeEEeecCCcccc
Q 010623 203 KAGE-ELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 203 ~~G~-~~~i~a~~vV~AdG~~S~v 225 (506)
.+|+ ..++++|.||+|+|.+|.-
T Consensus 156 ~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 156 KAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp STTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCCeeEEEEeCEEEECCCCCCCC
Confidence 2365 4467899999999998753
No 89
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.05 E-value=1.2e-08 Score=104.98 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=46.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCCCCCccc-----c-------c---ccccchHHHHHHhCchhHH
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG--RRVHVIERDLSEPDRIV-----G-------E---LLQPGGYLKLIELGLEDCV 121 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~~~~~~~~-----g-------~---~l~~~~~~~l~~~g~~~~~ 121 (506)
.+||+|||||++||++|+.|+++| ++|+|+|+++....+.. | . ...+...+.++++|+.+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999765432111 1 0 1234456788889887544
No 90
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.05 E-value=1.6e-09 Score=106.86 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC------CcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDG------RRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G------~~v~vvE~~~ 93 (506)
+||+|||||++|+++|+.|+++| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999998 9999999985
No 91
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.03 E-value=1e-09 Score=107.00 Aligned_cols=117 Identities=17% Similarity=0.251 Sum_probs=78.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
..+||+||||||+|+++|+.|+++|++|+|+|+.. . |..+... . ..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~-----gg~~~~~--------~------~~-------------- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-P-----GGQIAWS--------E------EV-------------- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-T-----TGGGGGC--------S------CB--------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-C-----Ccccccc--------c------cc--------------
Confidence 35899999999999999999999999999999972 1 1111100 0 00
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEee--CCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEE--KGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~--~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
..++ .+ ...+++..+.+.+.+.+.+. +++++.++|+++..+ ++. .+++...+|+ ++++|+||
T Consensus 53 ----~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~~--~~~v~~~~g~--~~~~~~vv 116 (325)
T 2q7v_A 53 ----ENFP--GF-----PEPIAGMELAQRMHQQAEKF-GAKVEMDEVQGVQHDATSHP--YPFTVRGYNG--EYRAKAVI 116 (325)
T ss_dssp ----CCST--TC-----SSCBCHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSSS--CCEEEEESSC--EEEEEEEE
T ss_pred ----ccCC--CC-----CCCCCHHHHHHHHHHHHHHc-CCEEEeeeEEEEEeccCCCc--eEEEEECCCC--EEEeCEEE
Confidence 0000 00 01234567788888888887 677877789988776 432 0233345665 46799999
Q ss_pred eecCCcccc
Q 010623 217 VCDGCFSNL 225 (506)
Q Consensus 217 ~AdG~~S~v 225 (506)
.|+|.++..
T Consensus 117 ~AtG~~~~~ 125 (325)
T 2q7v_A 117 LATGADPRK 125 (325)
T ss_dssp ECCCEEECC
T ss_pred ECcCCCcCC
Confidence 999987643
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.00 E-value=1.5e-09 Score=113.61 Aligned_cols=140 Identities=23% Similarity=0.213 Sum_probs=81.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
.++||+|||||++|+++|+.|++.|++|+|+|+++....... ..-.| |..- ... .....+.+ .
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~-~~~~p---------g~~~---d~~-~~~~~~~f-~-- 77 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY-WNRYP---------GARC---DIE-SIEYCYSF-S-- 77 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCT---------TCBC---SSC-TTTSSCCS-C--
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-ccCCC---------ceee---ccc-cccccccc-C--
Confidence 468999999999999999999999999999999864321100 00000 0000 000 00000000 0
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCC-CEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLP-NVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~-~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
......+. ......++.++.+.|...+.+.+ ++.++++ +|+++..+++.. .++++.++|++ ++||+||
T Consensus 78 ~~~~~~~~-------~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~--~~ad~vV 147 (542)
T 1w4x_A 78 EEVLQEWN-------WTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGDR--IRARYLI 147 (542)
T ss_dssp HHHHHHCC-------CCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCCE--EEEEEEE
T ss_pred hhhhhccC-------cccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCCE--EEeCEEE
Confidence 00000000 00113456677788877777663 2456666 499988765311 24455677863 6799999
Q ss_pred eecCCcccc
Q 010623 217 VCDGCFSNL 225 (506)
Q Consensus 217 ~AdG~~S~v 225 (506)
.|+|.+|.-
T Consensus 148 ~AtG~~s~p 156 (542)
T 1w4x_A 148 MASGQLSVP 156 (542)
T ss_dssp ECCCSCCCC
T ss_pred ECcCCCCCC
Confidence 999998754
No 93
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.98 E-value=2.1e-08 Score=103.19 Aligned_cols=63 Identities=24% Similarity=0.334 Sum_probs=47.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccccc------------cc---ccchHHHHHHhCchhHH
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGE------------LL---QPGGYLKLIELGLEDCV 121 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~------------~l---~~~~~~~l~~~g~~~~~ 121 (506)
.++||+|||||++||++|+.|+++|++|+|+|+++....+.... .+ .+...++++++|+.+.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCccee
Confidence 35899999999999999999999999999999987654322110 11 24456788899987544
No 94
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.98 E-value=1.5e-09 Score=105.86 Aligned_cols=117 Identities=17% Similarity=0.192 Sum_probs=79.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.+||+|||||++|+++|+.|+++|++|+|+|+.+... |. + .. .... ...+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g----G~-~--------~~--------~~~~-----~~~~---- 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG----GQ-L--------SA--------LYPE-----KYIY---- 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----HH-H--------HH--------HCTT-----SEEC----
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC----ce-e--------hh--------cCCC-----ceEe----
Confidence 4799999999999999999999999999999986421 10 0 00 0000 0000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.++ .+ ..+.+.++...+.+.+.+. ++.++.+ +|+++..++++ .+.+...+|+ +++|.||.|
T Consensus 57 ----~~~--~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~---~~~d~vVlA 118 (332)
T 3lzw_A 57 ----DVA--GF------PKIRAQELINNLKEQMAKF-DQTICLEQAVESVEKQADG--VFKLVTNEET---HYSKTVIIT 118 (332)
T ss_dssp ----CST--TC------SSEEHHHHHHHHHHHHTTS-CCEEECSCCEEEEEECTTS--CEEEEESSEE---EEEEEEEEC
T ss_pred ----ccC--CC------CCCCHHHHHHHHHHHHHHh-CCcEEccCEEEEEEECCCC--cEEEEECCCE---EEeCEEEEC
Confidence 000 00 0134567888888888887 7888875 59999877652 2445566774 679999999
Q ss_pred cCCccc
Q 010623 219 DGCFSN 224 (506)
Q Consensus 219 dG~~S~ 224 (506)
+|.+|.
T Consensus 119 tG~~~~ 124 (332)
T 3lzw_A 119 AGNGAF 124 (332)
T ss_dssp CTTSCC
T ss_pred CCCCcC
Confidence 999653
No 95
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.98 E-value=8.8e-10 Score=107.85 Aligned_cols=119 Identities=17% Similarity=0.216 Sum_probs=78.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+||||||+|+++|+.|++.|++|+|+|+.........|. +... . . .
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-~~~~-----------------~--~-----~----- 57 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ-LTTT-----------------T--D-----V----- 57 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GGGC-----------------S--E-----E-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce-eeec-----------------c--c-----c-----
Confidence 4899999999999999999999999999999831110111110 0000 0 0 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
..++ .+ ...+.+..+...|.+.+.+. +++++.++|+++..+++. +++.. +|+ ++++|+||.|+
T Consensus 58 ---~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~---~~v~~-~~~--~~~~~~vv~A~ 120 (333)
T 1vdc_A 58 ---ENFP--GF-----PEGILGVELTDKFRKQSERF-GTTIFTETVTKVDFSSKP---FKLFT-DSK--AILADAVILAI 120 (333)
T ss_dssp ---CCST--TC-----TTCEEHHHHHHHHHHHHHHT-TCEEECCCCCEEECSSSS---EEEEC-SSE--EEEEEEEEECC
T ss_pred ---ccCC--CC-----ccCCCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEEcCCE---EEEEE-CCc--EEEcCEEEECC
Confidence 0000 00 01245567888888888777 788888888888776653 33444 554 46799999999
Q ss_pred CCcccc
Q 010623 220 GCFSNL 225 (506)
Q Consensus 220 G~~S~v 225 (506)
|.++..
T Consensus 121 G~~~~~ 126 (333)
T 1vdc_A 121 GAVAKR 126 (333)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 998754
No 96
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.96 E-value=1.9e-09 Score=105.62 Aligned_cols=117 Identities=26% Similarity=0.298 Sum_probs=77.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
++..+||+||||||+|+++|+.|++.|++|+|+|+.. ..|. +... . ..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~-~~~~-----------------~--~~------- 58 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGGA-LMTT-----------------T--DV------- 58 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSCG-GGSC-----------------S--CB-------
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCCc-eecc-----------------c--hh-------
Confidence 3456899999999999999999999999999999752 1111 1000 0 00
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEE-EeCCccEEEEEcCeE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQY-KTKAGEELTAYAPLT 215 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v-~~~~G~~~~i~a~~v 215 (506)
..++ . ....+.+..+...|.+.+.+. +++++.++++++.. ++. +++ ...+|+ ++++|.|
T Consensus 59 ------~~~~--~-----~~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~-~~~---~~v~~~~~g~--~~~~d~l 118 (335)
T 2a87_A 59 ------ENYP--G-----FRNGITGPELMDEMREQALRF-GADLRMEDVESVSL-HGP---LKSVVTADGQ--THRARAV 118 (335)
T ss_dssp ------CCST--T-----CTTCBCHHHHHHHHHHHHHHT-TCEEECCCEEEEEC-SSS---SEEEEETTSC--EEEEEEE
T ss_pred ------hhcC--C-----CCCCCCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEe-CCc---EEEEEeCCCC--EEEeCEE
Confidence 0000 0 001234556777888777776 78888888888876 332 233 456675 3669999
Q ss_pred EeecCCcccc
Q 010623 216 IVCDGCFSNL 225 (506)
Q Consensus 216 V~AdG~~S~v 225 (506)
|.|+|.++..
T Consensus 119 viAtG~~~~~ 128 (335)
T 2a87_A 119 ILAMGAAARY 128 (335)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCccC
Confidence 9999987643
No 97
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.96 E-value=2.2e-09 Score=103.96 Aligned_cols=119 Identities=16% Similarity=0.269 Sum_probs=74.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
..|||+||||||||++||+.|+++|++|+|+|+...... .+++. +.. ... ++
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~-------~~~G~-----------~~~--~~~-----i~--- 54 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGV-------AAGGQ-----------LTT--TTI-----IE--- 54 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGC-------CTTCG-----------GGG--SSE-----EC---
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCc-------ccCCC-----------cCC--hHH-----hh---
Confidence 358999999999999999999999999999998742111 01110 000 000 00
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.++ .+. ..+...++...+.+.+.+. ++.+...++.....+.+.. .+.+.++. ++.+|.||.|
T Consensus 55 -----~~~--g~~-----~~i~~~~l~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~---~~~~~~~~--~~~~~~liiA 116 (314)
T 4a5l_A 55 -----NFP--GFP-----NGIDGNELMMNMRTQSEKY-GTTIITETIDHVDFSTQPF---KLFTEEGK--EVLTKSVIIA 116 (314)
T ss_dssp -----CST--TCT-----TCEEHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSE---EEEETTCC--EEEEEEEEEC
T ss_pred -----hcc--CCc-----ccCCHHHHHHHHHHHHhhc-CcEEEEeEEEEeecCCCce---EEEECCCe--EEEEeEEEEc
Confidence 000 000 1134456777777777777 6777777777766655532 23345665 4669999999
Q ss_pred cCCcc
Q 010623 219 DGCFS 223 (506)
Q Consensus 219 dG~~S 223 (506)
+|...
T Consensus 117 TG~~~ 121 (314)
T 4a5l_A 117 TGATA 121 (314)
T ss_dssp CCEEE
T ss_pred ccccc
Confidence 99754
No 98
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.94 E-value=1.3e-09 Score=113.62 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=82.6
Q ss_pred CCcEEEECCCHHHHHHHHHHH-HCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 60 DADVIVVGAGVAGAALANTLA-KDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La-~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
++||+|||||++|+++|+.|+ +.|++|+|+|+++..... ... + ..-|.. .....
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGt----w~~-~-----~ypg~~---------------~d~~s 62 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGT----WYW-N-----RYPGAL---------------SDTES 62 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTH----HHH-C-----CCTTCE---------------EEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCc----ccc-c-----CCCCce---------------ecCCc
Confidence 589999999999999999999 999999999998643210 000 0 000000 00000
Q ss_pred ceeeeecCCcC---CCCCcccccccchHHHHHHHHHHHcCCCE--EEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEc
Q 010623 139 NRTQISYPLEK---FHSDVAGRGFHNGRFVQRLREKAASLPNV--RLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (506)
Q Consensus 139 ~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~L~~~~~~~~~v--~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a 212 (506)
.. ..+.... ..........++.++.+.|.+.+.+. ++ .++++ +|+++..+++.. .+++...+|+ +++|
T Consensus 63 ~~--~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~G~--~i~a 136 (540)
T 3gwf_A 63 HL--YRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTSALYLDDEN-LWEVTTDHGE--VYRA 136 (540)
T ss_dssp GG--SSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEEEEEETTTT-EEEEEETTSC--EEEE
T ss_pred ce--eeeccccccccCCCCcccCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEEEEEeCCCC-EEEEEEcCCC--EEEe
Confidence 00 0000000 00000112346778888898888887 44 56666 599988765421 2456677887 4679
Q ss_pred CeEEeecCCcccc
Q 010623 213 PLTIVCDGCFSNL 225 (506)
Q Consensus 213 ~~vV~AdG~~S~v 225 (506)
|+||.|+|.+|.-
T Consensus 137 d~lV~AtG~~s~p 149 (540)
T 3gwf_A 137 KYVVNAVGLLSAI 149 (540)
T ss_dssp EEEEECCCSCCSB
T ss_pred CEEEECCcccccC
Confidence 9999999998754
No 99
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.94 E-value=3.9e-09 Score=108.19 Aligned_cols=151 Identities=13% Similarity=0.170 Sum_probs=83.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCc---EEEEecCCCCCCccccccccc--chHHHHHHhCchhHHhhcccceecce
Q 010623 61 ADVIVVGAGVAGAALANTLAK---DGRR---VHVIERDLSEPDRIVGELLQP--GGYLKLIELGLEDCVEQIDAQRVFGY 132 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~---~G~~---v~vvE~~~~~~~~~~g~~l~~--~~~~~l~~~g~~~~~~~~~~~~~~~~ 132 (506)
.||+||||||+|+++|..|++ .|++ |+|+|+.+.... ..... .+. ...|+.. ........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG----~w~~~~~~g~---~~~g~~~-----~~~~y~~l 70 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGG----QWNYTWRTGL---DENGEPV-----HSSMYRYL 70 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCG----GGSCCSCCSB---CTTSSBC-----CCCCCTTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCC----EeecCCCCCc---cccCCCC-----cCccccch
Confidence 699999999999999999999 9999 999999864321 10000 000 0011100 00000000
Q ss_pred EEEECCceeeeec---CCcCCCCCcccccccchHHHHHHHHHHHcCCCEE--EEec-eEEEEEeeCC-eEEEEEEEe-CC
Q 010623 133 ALFKDGNRTQISY---PLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVR--LEQG-TVTSLLEEKG-TIKGVQYKT-KA 204 (506)
Q Consensus 133 ~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~--i~~~-~v~~~~~~~~-~v~~v~v~~-~~ 204 (506)
..+.......+ ++...........+++..+.+.|.+.+.+. ++. ++++ +|+++..+++ +...|++.+ .+
T Consensus 71 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~ 147 (464)
T 2xve_A 71 --WSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT 147 (464)
T ss_dssp --BCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTTTEEEEEEEETTT
T ss_pred --hhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC
Confidence 00000000000 000000000122356778888888888876 555 6666 5999987654 122355544 24
Q ss_pred ccEEEEEcCeEEeecCCcccch
Q 010623 205 GEELTAYAPLTIVCDGCFSNLR 226 (506)
Q Consensus 205 G~~~~i~a~~vV~AdG~~S~vR 226 (506)
|+..++.+|.||.|+|.+|.-+
T Consensus 148 g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 148 DTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp TEEEEEEESEEEECCCSSSSBC
T ss_pred CceEEEEcCEEEECCCCCCCCc
Confidence 6545688999999999877544
No 100
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.94 E-value=4.1e-09 Score=107.01 Aligned_cols=35 Identities=34% Similarity=0.524 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~ 95 (506)
+||+|||||++|+++|+.|+++|++|+|+|+++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 79999999999999999999999999999997643
No 101
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.92 E-value=2.1e-09 Score=104.46 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=76.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+.+||+||||||+|+++|+.|++.|++|+|+|+.. ..|. +... . ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~-~~~~-----------------~--~~--------- 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGGQ-LTTT-----------------T--EV--------- 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTGG-GGGC-----------------S--BC---------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCce-Eecc-----------------h--hh---------
Confidence 35899999999999999999999999999999652 1111 1000 0 00
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..++ .+ ...+.+..+...+.+.+.+. +++++.++++++..+++.+ ++ ..+|+ ++.+|+||.|
T Consensus 50 ----~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~---~v-~~~~~--~~~~~~lv~A 111 (320)
T 1trb_A 50 ----ENWP--GD-----PNDLTGPLLMERMHEHATKF-ETEIIFDHINKVDLQNRPF---RL-NGDNG--EYTCDALIIA 111 (320)
T ss_dssp ----CCST--TC-----CSSCBHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSE---EE-EESSC--EEEEEEEEEC
T ss_pred ----hhCC--CC-----CCCCCHHHHHHHHHHHHHHC-CCEEEEeeeeEEEecCCEE---EE-EeCCC--EEEcCEEEEC
Confidence 0000 00 01134556777777777776 7888888888887766543 33 34555 3669999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
+|.++..
T Consensus 112 tG~~~~~ 118 (320)
T 1trb_A 112 TGASARY 118 (320)
T ss_dssp CCEEECC
T ss_pred CCCCcCC
Confidence 9987643
No 102
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.92 E-value=8.8e-09 Score=105.66 Aligned_cols=151 Identities=17% Similarity=0.196 Sum_probs=82.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-----CcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEE
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG-----RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G-----~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 134 (506)
.+||+||||||+|+++|..|+++| ++|+|+|+.+...... +..+....+. ......+..... +...+.+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~-~~~~~~~~~~----~~~~~~l~~~~~-p~~~~~~ 103 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG-NTLVSQSELQ----ISFLKDLVSLRN-PTSPYSF 103 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG-GGCCSSCBCS----SCTTSSSSTTTC-TTCTTSH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC-CCCCCCCcCC----cchhhccccccC-CCCCCCh
Confidence 579999999999999999999999 9999999997543211 1000000000 000000000000 0000000
Q ss_pred --E--ECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee--CCeEEEEEEEeC--Cc
Q 010623 135 --F--KDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE--KGTIKGVQYKTK--AG 205 (506)
Q Consensus 135 --~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~--~~~v~~v~v~~~--~G 205 (506)
| ..+.. ..+. ........+..+...|...+.+. ++.+++++ |+++..+ +++...+++... +|
T Consensus 104 ~~~l~~~~~~--~~~~------~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g 174 (463)
T 3s5w_A 104 VNYLHKHDRL--VDFI------NLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADG 174 (463)
T ss_dssp HHHHHHTTCH--HHHH------HHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTS
T ss_pred hHhhhhcCce--eecc------cccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCC
Confidence 0 00000 0000 00011235667888888888777 56677774 9888765 244433455443 45
Q ss_pred cEEEEEcCeEEeecCCcccc
Q 010623 206 EELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 206 ~~~~i~a~~vV~AdG~~S~v 225 (506)
++.++++|.||.|+|....+
T Consensus 175 ~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 175 EELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp CEEEEEESEEEECCCCEECC
T ss_pred ceEEEEeCEEEECCCCCCCC
Confidence 55568899999999985543
No 103
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.91 E-value=3.3e-09 Score=102.60 Aligned_cols=114 Identities=25% Similarity=0.325 Sum_probs=76.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+||||||+|+++|+.|++.|++|+|+|+.. .|..... .++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~------gG~~~~~--------~~~~--------------------- 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF------GGQILDT--------VDIE--------------------- 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST------TGGGGGC--------CEEC---------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC------Cceeccc--------cccc---------------------
Confidence 3799999999999999999999999999998641 1111100 0000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeC--CeEEEEEEEeCCccEEEEEcCeEE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK--GTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~--~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
.+. . ....++..+...+.+.+.+. +++++.+ +|+.+..+. ++ .+.+..++|++ +++|.||
T Consensus 46 ----~~~-----~---~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~~~--~~~v~~~~g~~--~~~~~lv 108 (310)
T 1fl2_A 46 ----NYI-----S---VPKTEGQKLAGALKVHVDEY-DVDVIDSQSASKLIPAAVEGG--LHQIETASGAV--LKARSII 108 (310)
T ss_dssp ----CBT-----T---BSSEEHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTC--CEEEEETTSCE--EEEEEEE
T ss_pred ----ccc-----C---cCCCCHHHHHHHHHHHHHHc-CCeEEccCEEEEEEecccCCc--eEEEEECCCCE--EEeCEEE
Confidence 000 0 00124456777888888776 7999988 699887542 21 24455667753 6699999
Q ss_pred eecCCcccc
Q 010623 217 VCDGCFSNL 225 (506)
Q Consensus 217 ~AdG~~S~v 225 (506)
.|+|.++..
T Consensus 109 ~AtG~~~~~ 117 (310)
T 1fl2_A 109 VATGAKWRN 117 (310)
T ss_dssp ECCCEEECC
T ss_pred ECcCCCcCC
Confidence 999987643
No 104
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.88 E-value=2.8e-09 Score=111.28 Aligned_cols=135 Identities=23% Similarity=0.261 Sum_probs=82.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
.++||+|||||++|+++|+.|++.|++|+|+|+++..... .... +.-|..-.+.. ..+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGt----w~~~------~ypg~~~dv~s------~~y------ 77 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGV----WYWN------RYPGARCDVES------IDY------ 77 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH----HHHC------CCTTCBCSSCT------TTS------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----cccC------CCCCceeCCCc------hhc------
Confidence 4689999999999999999999999999999998643210 0000 00010000000 000
Q ss_pred ceeeeecCCcC---CCCCcccccccchHHHHHHHHHHHcCCCE--EEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEc
Q 010623 139 NRTQISYPLEK---FHSDVAGRGFHNGRFVQRLREKAASLPNV--RLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (506)
Q Consensus 139 ~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~L~~~~~~~~~v--~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a 212 (506)
.+.+.. ..........++.++...+.+.+.+. ++ .++++ +|+++..+++.. .+++...+|++ ++|
T Consensus 78 -----~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~w~V~~~~G~~--i~a 148 (549)
T 4ap3_A 78 -----SYSFSPELEQEWNWSEKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAVLDEEGL-RWTVRTDRGDE--VSA 148 (549)
T ss_dssp -----SCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEEEETTTT-EEEEEETTCCE--EEE
T ss_pred -----ccccccccccCCCCccCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEEEcCCCC-EEEEEECCCCE--EEe
Confidence 000000 00000112346677888888888887 44 56666 599998765421 24566778874 679
Q ss_pred CeEEeecCCccc
Q 010623 213 PLTIVCDGCFSN 224 (506)
Q Consensus 213 ~~vV~AdG~~S~ 224 (506)
|+||.|+|..|.
T Consensus 149 d~lV~AtG~~s~ 160 (549)
T 4ap3_A 149 RFLVVAAGPLSN 160 (549)
T ss_dssp EEEEECCCSEEE
T ss_pred CEEEECcCCCCC
Confidence 999999998764
No 105
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.88 E-value=5.5e-09 Score=103.65 Aligned_cols=134 Identities=18% Similarity=0.195 Sum_probs=78.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCCccccccc-ccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLSEPDRIVGELL-QPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~~~~~~~~g~~l-~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
++||+|||||++|+++|..|++.|+ +|+|+|+++ .. +... .+.... +. .........++
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G----g~~~~~~~~~~------~~---~~~~~~~~~g~----- 64 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG----HSFKHWPKSTR------TI---TPSFTSNGFGM----- 64 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT----HHHHTSCTTCB------CS---SCCCCCGGGTC-----
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC----CccccCccccc------cc---CcchhcccCCc-----
Confidence 5899999999999999999999999 999999985 11 1000 000000 00 00000000000
Q ss_pred CceeeeecCCcCCCCC----cccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEc
Q 010623 138 GNRTQISYPLEKFHSD----VAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a 212 (506)
..+........ .....+++..+...+.+.+.+. ++.++.++ |+++..+++. +.+.+.+|+ +.+
T Consensus 65 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~---~~~ 132 (369)
T 3d1c_A 65 -----PDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHY-ELNIFENTVVTNISADDAY---YTIATTTET---YHA 132 (369)
T ss_dssp -----CCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCC---EEE
T ss_pred -----hhhhhccccccccccccccCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEECCCe---EEEEeCCCE---EEe
Confidence 00000000000 0011234556777788777777 67888875 9999877653 445556663 669
Q ss_pred CeEEeecCCccc
Q 010623 213 PLTIVCDGCFSN 224 (506)
Q Consensus 213 ~~vV~AdG~~S~ 224 (506)
|.||.|+|.++.
T Consensus 133 d~vVlAtG~~~~ 144 (369)
T 3d1c_A 133 DYIFVATGDYNF 144 (369)
T ss_dssp EEEEECCCSTTS
T ss_pred CEEEECCCCCCc
Confidence 999999999863
No 106
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.87 E-value=6.5e-09 Score=107.18 Aligned_cols=38 Identities=32% Similarity=0.494 Sum_probs=34.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
|+.++||+|||||++|+++|+.|++.|++|+|+|+++.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 34468999999999999999999999999999999754
No 107
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.85 E-value=4e-09 Score=108.25 Aligned_cols=145 Identities=18% Similarity=0.127 Sum_probs=82.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccccccccc---chHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQP---GGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
++||+||||||+|+++|+.|++.|++|+|+|++. . .|..++. .+...+...++.+.+.... ...++. .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~----gG~~~~~g~~psk~ll~~~~~~~~~~~~~--~~~g~~--~ 73 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-W----GGVCLNVGCIPSKALLRNAELVHIFTKDA--KAFGIS--G 73 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-T----THHHHHHSHHHHHHHHHHHHHHHHHHHHT--TTTTEE--E
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-C----CCcccccCchhhHHHHHHHHHHHHHHHHH--HhcCCC--C
Confidence 4899999999999999999999999999999972 1 1211221 1223344444444433100 111221 1
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
.. ...+. ... ...... ...+...+.+.+.+. +++++.++.+. .+++ .+++.+.+|+..++++|.||
T Consensus 74 ~~---~~~~~--~~~-~~~~~~--~~~l~~~l~~~~~~~-gv~~~~g~~~~--id~~---~v~V~~~~G~~~~~~~d~lV 139 (464)
T 2a8x_A 74 EV---TFDYG--IAY-DRSRKV--AEGRVAGVHFLMKKN-KITEIHGYGTF--ADAN---TLLVDLNDGGTESVTFDNAI 139 (464)
T ss_dssp CC---EECHH--HHH-HHHHHH--HHHHHHHHHHHHHHT-TCEEECEEEEE--SSSS---EEEEEETTSCCEEEEEEEEE
T ss_pred CC---ccCHH--HHH-HHHHHH--HHHHHHHHHHHHHhC-CCEEEEeEEEE--ecCC---eEEEEeCCCceEEEEcCEEE
Confidence 00 01110 000 000000 123455566666665 88888887433 2334 35566677743457899999
Q ss_pred eecCCcccchh
Q 010623 217 VCDGCFSNLRR 227 (506)
Q Consensus 217 ~AdG~~S~vR~ 227 (506)
.|||.++....
T Consensus 140 iAtG~~~~~~~ 150 (464)
T 2a8x_A 140 IATGSSTRLVP 150 (464)
T ss_dssp ECCCEEECCCT
T ss_pred ECCCCCCCCCC
Confidence 99999885543
No 108
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.84 E-value=9e-09 Score=105.82 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=78.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
++||+||||||+|+++|..|++.|++|+|+|+++............| ....+....+.+.+... ....+... ...
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p-~k~l~~~~~~~~~~~~~--~~~~g~~~--~~~ 80 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIP-SKALLHSSHMYHEAKHS--FANHGVKV--SNV 80 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHH-HHHHHHHHHHHHHHHHT--HHHHTEEE--SCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccc-hHHHHHHHHHHHHHHHH--HHhcCccc--CCC
Confidence 58999999999999999999999999999999864322111000011 11111111122222110 00011110 000
Q ss_pred eeeeecCCcCCCCCccccccc-----chHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCe
Q 010623 140 RTQISYPLEKFHSDVAGRGFH-----NGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPL 214 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~-----~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~ 214 (506)
...+ ...+. ...+...+.+.+.+. +++++.++++.+ +.+ .+++.+.+|+..++++|.
T Consensus 81 --~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~~~v~~~~G~~~~i~~d~ 142 (470)
T 1dxl_A 81 --EIDL----------AAMMGQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFV--SPS---EISVDTIEGENTVVKGKH 142 (470)
T ss_dssp --EECH----------HHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEESCEEEE--ETT---EEEECCSSSCCEEEECSE
T ss_pred --ccCH----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeEEEEe--cCC---EEEEEeCCCceEEEEcCE
Confidence 0000 00111 112334445555555 788888875433 334 355656677434578999
Q ss_pred EEeecCCcccchhh
Q 010623 215 TIVCDGCFSNLRRS 228 (506)
Q Consensus 215 vV~AdG~~S~vR~~ 228 (506)
||.|+|.++.+...
T Consensus 143 lIiAtGs~p~~p~~ 156 (470)
T 1dxl_A 143 IIIATGSDVKSLPG 156 (470)
T ss_dssp EEECCCEEECCBTT
T ss_pred EEECCCCCCCCCCC
Confidence 99999998765443
No 109
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.83 E-value=7.4e-09 Score=108.06 Aligned_cols=139 Identities=18% Similarity=0.119 Sum_probs=80.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
.++||+|||||++|+++|+.|++.|++|+|+|+++.....-.-. -.|.. ............ +...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~-~yPg~-----~~d~~~~~y~~~---------f~~~ 72 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN-RYPGC-----RLDTESYAYGYF---------ALKG 72 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-CCTTC-----BCSSCHHHHCHH---------HHTT
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC-CCCce-----eecCchhhcccc---------cCcc
Confidence 35899999999999999999999999999999986432110000 00000 000000000000 0000
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCE--EEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNV--RLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v--~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
.... ........++.++...+.+.+.+. ++ .++++ +|+++..+++.. .+++++++|+ +++||+|
T Consensus 73 -------~~~~--~~~~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~--~~~ad~l 139 (545)
T 3uox_A 73 -------IIPE--WEWSENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDR-LWEVTLDNEE--VVTCRFL 139 (545)
T ss_dssp -------SSTT--CCCSBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGT-EEEEEETTTE--EEEEEEE
T ss_pred -------cccC--CCccccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCC-EEEEEECCCC--EEEeCEE
Confidence 0000 000112345667778888777776 33 55666 588887654321 2556677886 4679999
Q ss_pred EeecCCcccc
Q 010623 216 IVCDGCFSNL 225 (506)
Q Consensus 216 V~AdG~~S~v 225 (506)
|.|+|..|.-
T Consensus 140 V~AtG~~s~p 149 (545)
T 3uox_A 140 ISATGPLSAS 149 (545)
T ss_dssp EECCCSCBC-
T ss_pred EECcCCCCCC
Confidence 9999987743
No 110
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.80 E-value=2.7e-09 Score=109.99 Aligned_cols=145 Identities=17% Similarity=0.108 Sum_probs=77.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccccccccc---chHHHHHHhCchhHHhhcccceecceEEE
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQP---GGYLKLIELGLEDCVEQIDAQRVFGYALF 135 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 135 (506)
.++||+||||||+|+++|+.|++.|++|+|+|+++... |..++. .+...+...+..+.+... ....++..+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G----G~~~~~g~~psk~l~~~~~~~~~~~~~--~~~~gi~~~ 77 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG----GTCLNVGCIPSKALLNNSHLFHQMHTE--AQKRGIDVN 77 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS----HHHHHHSHHHHHHHHHHHHHHHHHHHT--SGGGTEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC----CccceeccHHHHHHHHHHHHHHHHHHH--HHhcCcccC
Confidence 35899999999999999999999999999999965321 211111 122233333333333210 011122211
Q ss_pred ECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEE------
Q 010623 136 KDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELT------ 209 (506)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~------ 209 (506)
... ...+. ... ..... ....+...+.+.+.+. +++++.++.+.. +++ .+++...+|+..+
T Consensus 78 -~~~--~~~~~--~~~-~~~~~--~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~v~V~~~~G~~~~~~~~~~ 143 (478)
T 1v59_A 78 -GDI--KINVA--NFQ-KAKDD--AVKQLTGGIELLFKKN-KVTYYKGNGSFE--DET---KIRVTPVDGLEGTVKEDHI 143 (478)
T ss_dssp -SCE--EECHH--HHH-HHHHH--HHHHHHHHHHHHHHHT-TCEEEESEEEES--SSS---EEEEECCTTCTTCCSSCEE
T ss_pred -CCC--ccCHH--HHH-HHHHH--HHHHHHHHHHHHHHhC-CCEEEEEEEEEc--cCC---eEEEEecCCCcccccccce
Confidence 000 00000 000 00000 0113344455556655 788888874322 333 3556566662123
Q ss_pred EEcCeEEeecCCcc
Q 010623 210 AYAPLTIVCDGCFS 223 (506)
Q Consensus 210 i~a~~vV~AdG~~S 223 (506)
+++|.||.|+|.++
T Consensus 144 i~~d~lViAtGs~p 157 (478)
T 1v59_A 144 LDVKNIIVATGSEV 157 (478)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEECcCCCC
Confidence 67999999999876
No 111
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.80 E-value=1.5e-08 Score=104.34 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLSEP 96 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~~~~ 96 (506)
.||+|||||++||++|+.|+++|. +|+|+|+++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 699999999999999999999999 999999986543
No 112
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.79 E-value=1.4e-08 Score=104.21 Aligned_cols=134 Identities=22% Similarity=0.168 Sum_probs=74.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchH---HHHHHhCchhHHhhcccceecceEEE
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGY---LKLIELGLEDCVEQIDAQRVFGYALF 135 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~ 135 (506)
.++||+||||||+|+++|..|++.|++|+|+||.+... |...+...+ ..+......+.+.....
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G----G~~~~~gciPsk~l~~~a~~~~~~~~~~~--------- 69 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG----GNCLYSGCVPSKTVREVIQTAWRLTNIAN--------- 69 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS----HHHHHHSHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC----CcccccCCCchHHHHHHHHHHHHHHhccc---------
Confidence 35899999999999999999999999999999875322 111111110 11111111111111100
Q ss_pred ECCceeeeecCCcCCCCCcccccccchHH---H--HHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEE
Q 010623 136 KDGNRTQISYPLEKFHSDVAGRGFHNGRF---V--QRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTA 210 (506)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l---~--~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i 210 (506)
......++ ...-....+ . ..+.+.+.+. ++++..++++.+. .+ .+.+.+.+|++.++
T Consensus 70 ---~~~~~~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~~g~v~~id--~~---~~~V~~~~g~~~~~ 131 (466)
T 3l8k_A 70 ---VKIPLDFS---------TVQDRKDYVQELRFKQHKRNMSQYE-TLTFYKGYVKIKD--PT---HVIVKTDEGKEIEA 131 (466)
T ss_dssp ---SCCCCCHH---------HHHHHHHHHHHHHHHHHHHHHTTCT-TEEEESEEEEEEE--TT---EEEEEETTSCEEEE
T ss_pred ---CCCCcCHH---------HHHHHHHhheeccccchHHHHHHhC-CCEEEEeEEEEec--CC---eEEEEcCCCcEEEE
Confidence 00000000 000001112 2 3333444444 8998888776664 33 35566778876557
Q ss_pred EcCeEEeecCCcc
Q 010623 211 YAPLTIVCDGCFS 223 (506)
Q Consensus 211 ~a~~vV~AdG~~S 223 (506)
.+|.||.|+|...
T Consensus 132 ~~d~lviAtG~~p 144 (466)
T 3l8k_A 132 ETRYMIIASGAET 144 (466)
T ss_dssp EEEEEEECCCEEE
T ss_pred ecCEEEECCCCCc
Confidence 8999999999743
No 113
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.78 E-value=3.5e-08 Score=95.50 Aligned_cols=34 Identities=32% Similarity=0.507 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.+|||+||||||+|+++|+.|++.|++|+|+||.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3699999999999999999999999999999986
No 114
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.78 E-value=2.1e-08 Score=104.33 Aligned_cols=114 Identities=25% Similarity=0.328 Sum_probs=77.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
..+||+||||||+|+++|+.|++.|++|+|+|+.. .|..... .++.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~------GG~~~~~--------~~~~-------------------- 256 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF------GGQVLDT--------VDIE-------------------- 256 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST------TGGGTTC--------SCBC--------------------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC------CCccccc--------cccc--------------------
Confidence 46899999999999999999999999999998642 1111100 0000
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeC--CeEEEEEEEeCCccEEEEEcCeE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK--GTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~--~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
.+. .. .......+...|.+.+.+. +++++.+ +|+++..+. ++ .+++...+|++ +++|.|
T Consensus 257 -----~~~-----~~---~~~~~~~l~~~l~~~~~~~-gv~v~~~~~v~~i~~~~~~~~--~~~V~~~~g~~--~~~d~v 318 (521)
T 1hyu_A 257 -----NYI-----SV---PKTEGQKLAGALKAHVSDY-DVDVIDSQSASKLVPAATEGG--LHQIETASGAV--LKARSI 318 (521)
T ss_dssp -----CBT-----TB---SSBCHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTS--CEEEEETTSCE--EEEEEE
T ss_pred -----ccC-----CC---CCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEeccCCCc--eEEEEECCCCE--EEcCEE
Confidence 000 00 0124456778888888877 8999988 599987431 21 24455667763 679999
Q ss_pred EeecCCccc
Q 010623 216 IVCDGCFSN 224 (506)
Q Consensus 216 V~AdG~~S~ 224 (506)
|.|+|.++.
T Consensus 319 VlAtG~~~~ 327 (521)
T 1hyu_A 319 IIATGAKWR 327 (521)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcC
Confidence 999998764
No 115
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.77 E-value=4.1e-08 Score=103.95 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=41.2
Q ss_pred CEEEEece-EEEEEeeCC--eEEEEEEEe-CCccEEEEEcCeEEeecCCcccchh
Q 010623 177 NVRLEQGT-VTSLLEEKG--TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNLRR 227 (506)
Q Consensus 177 ~v~i~~~~-v~~~~~~~~--~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~S~vR~ 227 (506)
+++++.++ |+++..+++ ++++|++.+ .+|+..+++||.||.|.|.....+-
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQL 328 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHH
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHH
Confidence 67888885 899987643 788999887 5788788999999999998876543
No 116
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.76 E-value=1.2e-07 Score=96.71 Aligned_cols=42 Identities=31% Similarity=0.464 Sum_probs=37.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR 98 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~ 98 (506)
++.++||+|||||++||++|..|++.|++|+|+|+++....+
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 345689999999999999999999999999999999765543
No 117
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.75 E-value=1.4e-07 Score=97.55 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=46.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccc------------cc---cccchHHHHHHhCchhH
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVG------------EL---LQPGGYLKLIELGLEDC 120 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g------------~~---l~~~~~~~l~~~g~~~~ 120 (506)
++||+|||||++||++|+.|++.|++|+|+|+++....+... .. ..++..+.++++|+.+.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~ 114 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNA 114 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcce
Confidence 489999999999999999999999999999998765433211 11 23445667778887543
No 118
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.74 E-value=1.3e-08 Score=105.85 Aligned_cols=37 Identities=32% Similarity=0.544 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
++.++||+||||||+|+++|+.|++.|++|+|+||.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 3457999999999999999999999999999999964
No 119
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.74 E-value=1.4e-08 Score=105.07 Aligned_cols=37 Identities=32% Similarity=0.453 Sum_probs=32.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
++++||+||||||+|+++|+.|++.|++|+|+||.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3469999999999999999999999999999998753
No 120
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.74 E-value=3.5e-08 Score=101.51 Aligned_cols=36 Identities=36% Similarity=0.483 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.++||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 358999999999999999999999999999999854
No 121
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.73 E-value=5.4e-08 Score=94.00 Aligned_cols=112 Identities=21% Similarity=0.376 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEE-EecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHV-IERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~v-vE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
.+||+|||||++|+++|..|+++|++|+| +||.. . .|...... .
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~----gG~~~~~~---------------~--------------- 48 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-P----GGQITSSS---------------E--------------- 48 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-T----TGGGGGCS---------------C---------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-C----Cceeeeec---------------e---------------
Confidence 48999999999999999999999999999 99942 1 11111000 0
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeC--CeEEEEEEEeCCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEK--GTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~--~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
...++. ....+...++...+.+.+.+. +++++.++|+++ .++ +.+. +.+. ++. ++++|.||
T Consensus 49 ---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i-~~~~~~~~~-v~~~--~~~--~~~~d~lv 111 (315)
T 3r9u_A 49 ---IENYPG-------VAQVMDGISFMAPWSEQCMRF-GLKHEMVGVEQI-LKNSDGSFT-IKLE--GGK--TELAKAVI 111 (315)
T ss_dssp ---BCCSTT-------CCSCBCHHHHHHHHHHHHTTT-CCEEECCCEEEE-EECTTSCEE-EEET--TSC--EEEEEEEE
T ss_pred ---eccCCC-------CCCCCCHHHHHHHHHHHHHHc-CcEEEEEEEEEE-ecCCCCcEE-EEEe--cCC--EEEeCEEE
Confidence 000000 001234567778888888887 788888889888 655 4322 2232 222 57799999
Q ss_pred eecCCcc
Q 010623 217 VCDGCFS 223 (506)
Q Consensus 217 ~AdG~~S 223 (506)
.|+|...
T Consensus 112 lAtG~~~ 118 (315)
T 3r9u_A 112 VCTGSAP 118 (315)
T ss_dssp ECCCEEE
T ss_pred EeeCCCC
Confidence 9999744
No 122
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.73 E-value=1.8e-08 Score=101.62 Aligned_cols=110 Identities=20% Similarity=0.241 Sum_probs=70.4
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 61 ADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~---~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
.||+|||||++|+++|..|++ .|++|+|+|+++... ..+.. . .. ..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~-------~~~~~---------~----~~-----------~~ 50 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSY-------FRPAL---------P----HV-----------AI 50 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEE-------ECCSS---------C----CC-----------CS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCce-------eccch---------h----hc-----------cc
Confidence 379999999999999999999 899999999986210 00000 0 00 00
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
+. ....++...+.+.+.+. +++++.++|+++..++.. |++.+.+++..++++|.||.
T Consensus 51 ~~-------------------~~~~~~~~~~~~~~~~~-gv~~~~~~v~~i~~~~~~---V~~~~g~~~~~~~~~d~lVi 107 (409)
T 3h8l_A 51 GV-------------------RDVDELKVDLSEALPEK-GIQFQEGTVEKIDAKSSM---VYYTKPDGSMAEEEYDYVIV 107 (409)
T ss_dssp SC-------------------CCCCCEEEEHHHHTGGG-TCEEEECEEEEEETTTTE---EEEECTTSCEEEEECSEEEE
T ss_pred CC-------------------cCHHHHHHHHHHHHhhC-CeEEEEeeEEEEeCCCCE---EEEccCCcccceeeCCEEEE
Confidence 00 00001111233334444 788888889998776653 55555555556688999999
Q ss_pred ecCCccc
Q 010623 218 CDGCFSN 224 (506)
Q Consensus 218 AdG~~S~ 224 (506)
|+|....
T Consensus 108 AtG~~~~ 114 (409)
T 3h8l_A 108 GIGAHLA 114 (409)
T ss_dssp CCCCEEC
T ss_pred CCCCCcC
Confidence 9998654
No 123
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=6.4e-08 Score=98.95 Aligned_cols=138 Identities=16% Similarity=0.145 Sum_probs=76.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccch---HHHHHHhCchhHHhhcccceecceEEEE
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGG---YLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~---~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
++||+|||||++|+++|..|++.|++|+|+|+.. .. |..++... ...+......+.+.... ..+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~g----G~~~~~g~~p~k~l~~~~~~~~~~~~~~---~~g~~~-- 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN-LG----GVCLNVGCIPSKALISASHRYEQAKHSE---EMGIKA-- 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT----HHHHHTSHHHHHHHHHHHHHHHHHHTCG---GGTEEC--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC-CC----CcCcCcCchhhHHHHHHHHHHHHHHHHH---hcCccc--
Confidence 4899999999999999999999999999999972 21 11111111 11111111122221110 111110
Q ss_pred CCceeeeecCCcCCCCCcccccccc-----hHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHN-----GRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAY 211 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~-----~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~ 211 (506)
... ... ....+.+ ..+...+.+.+.+. +++++.++++.+ +++ .+++.+.+|+ .+++
T Consensus 73 ~~~--~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~i--d~~---~v~V~~~~G~-~~i~ 133 (455)
T 1ebd_A 73 ENV--TID----------FAKVQEWKASVVKKLTGGVEGLLKGN-KVEIVKGEAYFV--DAN---TVRVVNGDSA-QTYT 133 (455)
T ss_dssp CSC--EEC----------HHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEESEEEEE--ETT---EEEEEETTEE-EEEE
T ss_pred CCC--ccC----------HHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEc--cCC---eEEEEeCCCc-EEEE
Confidence 000 000 0011111 12444556666665 789988875443 344 3556666663 3578
Q ss_pred cCeEEeecCCcccch
Q 010623 212 APLTIVCDGCFSNLR 226 (506)
Q Consensus 212 a~~vV~AdG~~S~vR 226 (506)
+|.||.|+|..+...
T Consensus 134 ~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 134 FKNAIIATGSRPIEL 148 (455)
T ss_dssp CSEEEECCCEEECCB
T ss_pred eCEEEEecCCCCCCC
Confidence 999999999876543
No 124
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.70 E-value=1.3e-07 Score=98.52 Aligned_cols=38 Identities=37% Similarity=0.477 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
.++||+|||||++||++|..|++.|++|+|+|+++...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 45799999999999999999999999999999987653
No 125
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.68 E-value=4.1e-08 Score=101.36 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.++||+||||||+|+++|+.|++.|.+|+|+||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46999999999999999999999999999999853
No 126
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.67 E-value=5.8e-08 Score=99.65 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
++||+|||||++|+++|+.|++.|++|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999854
No 127
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.67 E-value=5.6e-08 Score=98.64 Aligned_cols=36 Identities=25% Similarity=0.494 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~~ 94 (506)
+++||+|||||++|+++|..|++.|. +|+|+|+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 45899999999999999999999998 7999998753
No 128
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.66 E-value=7.6e-08 Score=98.78 Aligned_cols=34 Identities=35% Similarity=0.445 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.++||+|||||++|+++|+.|++.|++|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999987
No 129
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.66 E-value=6.4e-08 Score=99.75 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcccch
Q 010623 163 RFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLR 226 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S~vR 226 (506)
.+.+.+.+.+++. +++++.+ +|+++..+++++ .+...+|+ ++.+|.||.|+|..+...
T Consensus 233 ~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~v---~v~~~~g~--~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 233 DLRQLLNDAMVAK-GISIIYEATVSQVQSTENCY---NVVLTNGQ--TICADRVMLATGRVPNTT 291 (484)
T ss_dssp HHHHHHHHHHHHH-TCEEESSCCEEEEEECSSSE---EEEETTSC--EEEESEEEECCCEEECCT
T ss_pred HHHHHHHHHHHHC-CCEEEeCCEEEEEEeeCCEE---EEEECCCc--EEEcCEEEEeeCCCcCCC
Confidence 4556677777776 7888887 499998876653 45567786 467999999999877653
No 130
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.64 E-value=2.3e-08 Score=101.74 Aligned_cols=108 Identities=16% Similarity=0.233 Sum_probs=69.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEEC
Q 010623 61 ADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~---~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 137 (506)
.||+|||||++|+++|..|++ .|++|+|+|+++... ..+...... .|..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~~~~--~g~~------------------- 56 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNPWVG--VGWK------------------- 56 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHHHHH--HTSS-------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCccccc--cCcc-------------------
Confidence 699999999999999999999 899999999986211 111000000 0000
Q ss_pred CceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
...++...+.+.+.+. +++++.++|+++..++.. | ..++|+ ++.+|+||.
T Consensus 57 ----------------------~~~~~~~~l~~~~~~~-gv~~~~~~v~~id~~~~~---V--~~~~g~--~i~~d~lvi 106 (437)
T 3sx6_A 57 ----------------------ERDDIAFPIRHYVERK-GIHFIAQSAEQIDAEAQN---I--TLADGN--TVHYDYLMI 106 (437)
T ss_dssp ----------------------CHHHHEEECHHHHHTT-TCEEECSCEEEEETTTTE---E--EETTSC--EEECSEEEE
T ss_pred ----------------------CHHHHHHHHHHHHHHC-CCEEEEeEEEEEEcCCCE---E--EECCCC--EEECCEEEE
Confidence 0111111233344444 788888889999776553 2 356776 367999999
Q ss_pred ecCCcccch
Q 010623 218 CDGCFSNLR 226 (506)
Q Consensus 218 AdG~~S~vR 226 (506)
|+|..+..-
T Consensus 107 AtG~~~~~~ 115 (437)
T 3sx6_A 107 ATGPKLAFE 115 (437)
T ss_dssp CCCCEECGG
T ss_pred CCCCCcCcc
Confidence 999876543
No 131
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.63 E-value=1.1e-07 Score=97.83 Aligned_cols=35 Identities=37% Similarity=0.437 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
++||+||||||+|+++|+.|++.|++|+|+||++.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 69999999999999999999999999999999863
No 132
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.61 E-value=1.1e-07 Score=98.49 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKD---GRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~---G~~v~vvE~~~ 93 (506)
++||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999985
No 133
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.61 E-value=3.3e-07 Score=93.04 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=36.3
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 56 ECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 56 ~~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
.++..+||+|||+|++|+++|..|++.|.+|+|+||++...
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 35567999999999999999999999999999999997543
No 134
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.61 E-value=1.5e-08 Score=98.61 Aligned_cols=115 Identities=22% Similarity=0.256 Sum_probs=67.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCc-----cccccc---ccchHHHHHHhCc-hhHHhhcccceecc
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR-----IVGELL---QPGGYLKLIELGL-EDCVEQIDAQRVFG 131 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~-----~~g~~l---~~~~~~~l~~~g~-~~~~~~~~~~~~~~ 131 (506)
.||+|||||++|+.+|+.|++.|++|+|+|+++..... ..+... +.++...+...|+ .++++..+..-...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~~ 81 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEA 81 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhhh
Confidence 59999999999999999999999999999998632211 011111 1112211111221 22222211100000
Q ss_pred eEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEE
Q 010623 132 YALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLL 189 (506)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~ 189 (506)
. + ...+ | . .....++|..+.+.+.+.+.++++++++.++|+++.
T Consensus 82 a----D--~~~i--p-----A-g~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~ 125 (443)
T 3g5s_A 82 A----D--LARV--P-----A-GGALAVDREEFSGYITERLTGHPLLEVVREEVREIP 125 (443)
T ss_dssp H----H--HSEE--C-----C-TTEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC
T ss_pred h----h--hcCC--C-----C-CccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc
Confidence 0 0 0000 1 0 011248999999999999999999999988777664
No 135
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.59 E-value=1.1e-07 Score=97.95 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=69.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+||+|||||++|+++|..|++. |.+|+|+|+.+......+ ++..+ +..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~--------~~~--------------- 86 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-------GLPYV--------ISG--------------- 86 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-------GHHHH--------HTT---------------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-------Ccchh--------hcC---------------
Confidence 6999999999999999999996 899999999864321111 11100 000
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV 216 (506)
.. . . ....+.+ ..+.+.+..+++++.+ +|+.+..+++. +++.+ .+|+..++++|.||
T Consensus 87 ~~-----~------~-~~~l~~~------~~~~~~~~~gv~~~~~~~v~~i~~~~~~---v~v~~~~~g~~~~~~~d~lv 145 (480)
T 3cgb_A 87 AI-----A------S-TEKLIAR------NVKTFRDKYGIDAKVRHEVTKVDTEKKI---VYAEHTKTKDVFEFSYDRLL 145 (480)
T ss_dssp SS-----S------C-GGGGBSS------CHHHHHHTTCCEEESSEEEEEEETTTTE---EEEEETTTCCEEEEECSEEE
T ss_pred Cc-----C------C-HHHhhhc------CHHHHHhhcCCEEEeCCEEEEEECCCCE---EEEEEcCCCceEEEEcCEEE
Confidence 00 0 0 0000000 1122222237888876 58888766663 55555 45764568899999
Q ss_pred eecCCccc
Q 010623 217 VCDGCFSN 224 (506)
Q Consensus 217 ~AdG~~S~ 224 (506)
.|+|....
T Consensus 146 iAtG~~p~ 153 (480)
T 3cgb_A 146 IATGVRPV 153 (480)
T ss_dssp ECCCEEEC
T ss_pred ECCCCccc
Confidence 99997654
No 136
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.58 E-value=6.2e-08 Score=98.84 Aligned_cols=112 Identities=20% Similarity=0.135 Sum_probs=68.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
+||+|||||++|+++|..|++. |.+|+|+|+++..... +.+.... +..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-------~~~~~~~--------~~~--------------- 50 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-------SAGMQLY--------LEG--------------- 50 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-------GGGHHHH--------HTT---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-------cccchhh--------hcC---------------
Confidence 3899999999999999999998 9999999998643211 1111100 000
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEE
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTI 216 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV 216 (506)
.. . .... ... .+. +.+.+. +++++.++ ++++..+++. |++.+ .+|+..++++|.+|
T Consensus 51 ~~--~--~~~~--------~~~--~~~----~~~~~~-gv~~~~~~~v~~i~~~~~~---v~~~~~~~g~~~~~~~d~lv 108 (447)
T 1nhp_A 51 KV--K--DVNS--------VRY--MTG----EKMESR-GVNVFSNTEITAIQPKEHQ---VTVKDLVSGEERVENYDKLI 108 (447)
T ss_dssp SS--C--CGGG--------SBS--CCH----HHHHHT-TCEEEETEEEEEEETTTTE---EEEEETTTCCEEEEECSEEE
T ss_pred cc--C--CHHH--------hhc--CCH----HHHHHC-CCEEEECCEEEEEeCCCCE---EEEEecCCCceEEEeCCEEE
Confidence 00 0 0000 000 011 222334 78887664 8888766663 55555 45665568899999
Q ss_pred eecCCccc
Q 010623 217 VCDGCFSN 224 (506)
Q Consensus 217 ~AdG~~S~ 224 (506)
.|+|....
T Consensus 109 iAtG~~p~ 116 (447)
T 1nhp_A 109 ISPGAVPF 116 (447)
T ss_dssp ECCCEEEC
T ss_pred EcCCCCcC
Confidence 99997643
No 137
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.57 E-value=2.4e-07 Score=95.36 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.++||+|||||++|+++|..|++.|++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999973
No 138
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.56 E-value=1.4e-07 Score=96.84 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSE 95 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~ 95 (506)
+.||+|||||++|+++|..|++. |++|+|+|+++..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 36999999999999999999998 9999999998653
No 139
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.56 E-value=1.4e-07 Score=95.29 Aligned_cols=36 Identities=44% Similarity=0.576 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCc--EEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRR--VHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~--v~vvE~~~~ 94 (506)
+++||+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 358999999999999999999999987 999999864
No 140
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.54 E-value=1.1e-07 Score=97.23 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~ 94 (506)
+||+|||||++|+++|..|++. |.+|+|+|+++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 4899999999999999999998 999999999864
No 141
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.54 E-value=2.4e-07 Score=95.48 Aligned_cols=34 Identities=38% Similarity=0.597 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.++||+||||||+|+++|+.|++.|++|+|+||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4699999999999999999999999999999964
No 142
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.52 E-value=8.7e-07 Score=90.71 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEE-eCCccEEEEEcCeEEeecCCcccc
Q 010623 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYK-TKAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 163 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~-~~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
.+.+.+.+.+++. +++++.++ |+++..+++++ +.+. ..+|+ +.+|.||.|.|.....
T Consensus 212 ~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~~g~---i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 212 DMRRGLHAAMEEK-GIRILCEDIIQSVSADADGR--RVATTMKHGE---IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSC--EEEEESSSCE---EEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCCE--EEEEEcCCCe---EEeCEEEEeeCcccCC
Confidence 4566677777777 88888874 99998775542 3455 67775 6799999999987654
No 143
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.52 E-value=3.5e-07 Score=96.68 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=71.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 59 FDADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
+..||+|||||++|+++|..|++. |++|+|+|+++... +.+.++... +..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~lp~~--------~~g------------- 86 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGLPYY--------IGG------------- 86 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHHHH--------HTT-------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCCchh--------hcC-------------
Confidence 457999999999999999999998 89999999986532 111111110 000
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEe-CCccEEEEEcCe
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPL 214 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~ 214 (506)
... + ....+...+...+.+. ++.++.+ +|+++..++.. +.+.+ .+|+..++.+|.
T Consensus 87 --~~~----~-------------~~~~~~~~~~~~~~~~-gi~v~~~~~V~~id~~~~~---v~v~~~~~g~~~~~~~d~ 143 (588)
T 3ics_A 87 --VIT----E-------------RQKLLVQTVERMSKRF-NLDIRVLSEVVKINKEEKT---ITIKNVTTNETYNEAYDV 143 (588)
T ss_dssp --SSC----C-------------GGGGBSSCHHHHHHHT-TCEEECSEEEEEEETTTTE---EEEEETTTCCEEEEECSE
T ss_pred --cCC----C-------------hHHhhccCHHHHHHhc-CcEEEECCEEEEEECCCCE---EEEeecCCCCEEEEeCCE
Confidence 000 0 0000111222233334 7788776 59998877664 44544 467666788999
Q ss_pred EEeecCCcc
Q 010623 215 TIVCDGCFS 223 (506)
Q Consensus 215 vV~AdG~~S 223 (506)
||.|+|...
T Consensus 144 lviAtG~~p 152 (588)
T 3ics_A 144 LILSPGAKP 152 (588)
T ss_dssp EEECCCEEE
T ss_pred EEECCCCCC
Confidence 999999743
No 144
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.52 E-value=1.8e-07 Score=95.51 Aligned_cols=34 Identities=21% Similarity=0.438 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~ 94 (506)
.||+|||||++|+++|..|++. |.+|+|+|+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 6999999999999999999998 999999999874
No 145
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.51 E-value=1.1e-07 Score=98.26 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC---CcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDG---RRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G---~~v~vvE~~~~ 94 (506)
+++||+|||||++|+++|..|++.| .+|+|+|+++.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 3589999999999999999999988 99999999864
No 146
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.47 E-value=1.7e-06 Score=89.42 Aligned_cols=63 Identities=16% Similarity=0.134 Sum_probs=46.1
Q ss_pred ccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCC-------eEEEEEEEe-CCccEEEEEcCeEEeecCCc
Q 010623 159 FHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG-------TIKGVQYKT-KAGEELTAYAPLTIVCDGCF 222 (506)
Q Consensus 159 i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~-------~v~~v~v~~-~~G~~~~i~a~~vV~AdG~~ 222 (506)
..|.++.+.|...+.+. +..+++++ |++++..+. ....|+..+ .+|+..+++|+.||.|+|..
T Consensus 142 p~r~E~~~Yl~~~A~~~-~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQF-SDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp CBHHHHHHHHHHHHHTT-GGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHc-CCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 46788999999999887 45577775 999876432 123355554 45777788999999999953
No 147
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.47 E-value=1.7e-07 Score=95.77 Aligned_cols=34 Identities=35% Similarity=0.524 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+||+||||||+|+++|..|++.|++|+|+|+++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 7999999999999999999999999999999853
No 148
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.46 E-value=3.2e-07 Score=92.23 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~~ 94 (506)
.||+|||||++|+++|..|++.|+ +|+|+|+++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCC
Confidence 489999999999999999999999 8999999863
No 149
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.43 E-value=1.1e-06 Score=91.96 Aligned_cols=52 Identities=31% Similarity=0.453 Sum_probs=43.0
Q ss_pred HcCCCEEEEece-EEEEEee--CCeEEEEEEEeCCccEEEEEc-CeEEeecCCccc
Q 010623 173 ASLPNVRLEQGT-VTSLLEE--KGTIKGVQYKTKAGEELTAYA-PLTIVCDGCFSN 224 (506)
Q Consensus 173 ~~~~~v~i~~~~-v~~~~~~--~~~v~~v~v~~~~G~~~~i~a-~~vV~AdG~~S~ 224 (506)
.+++++++..++ |+++..+ +++++||++...+|+..+++| +-||.|.|+...
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred hcCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 345689999885 9999988 788999999877788888889 679999998753
No 150
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.43 E-value=1.9e-07 Score=90.97 Aligned_cols=38 Identities=37% Similarity=0.516 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAK--DGRRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~--~G~~v~vvE~~~~~~ 96 (506)
.++||+||||||+||+||+.|++ .|++|+|+||.+.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 46899999999999999999975 599999999986543
No 151
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.43 E-value=6.3e-07 Score=89.32 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+++|+|||||+||+++|..|++.+.+|+|+|+.+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 58999999999999999999888999999999865
No 152
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.43 E-value=3.5e-07 Score=92.77 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH--CCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAK--DGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~--~G~~v~vvE~~~~ 94 (506)
.||+|||||++|+++|..|++ .|++|+|+|+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 699999999999999999999 8999999999853
No 153
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.43 E-value=1e-06 Score=92.07 Aligned_cols=52 Identities=23% Similarity=0.365 Sum_probs=42.6
Q ss_pred HHcCCCEEEEece-EEEEEee----CCeEEEEEEEeCCccEEEEEcC-eEEeecCCcc
Q 010623 172 AASLPNVRLEQGT-VTSLLEE----KGTIKGVQYKTKAGEELTAYAP-LTIVCDGCFS 223 (506)
Q Consensus 172 ~~~~~~v~i~~~~-v~~~~~~----~~~v~~v~v~~~~G~~~~i~a~-~vV~AdG~~S 223 (506)
+.++++.++..++ |+++..+ +++++||++...+|+.++++|+ -||.|.|+..
T Consensus 236 ~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 236 NYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTT
T ss_pred hhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccC
Confidence 3445699999885 9999987 6789999998678888889996 6999999874
No 154
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.42 E-value=6.8e-07 Score=91.93 Aligned_cols=34 Identities=35% Similarity=0.481 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.++||+||||||+|+++|+.|++.|++|+|+||+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4699999999999999999999999999999976
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.41 E-value=1.6e-06 Score=88.70 Aligned_cols=103 Identities=19% Similarity=0.230 Sum_probs=75.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+..... .
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 208 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------G---------------------- 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------S----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------c----------------------
Confidence 358999999999999999999999999999998532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCC--ccEEEEEcCeEE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKA--GEELTAYAPLTI 216 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~--G~~~~i~a~~vV 216 (506)
...+.+.+.+.+++. +++++.++ |+++..+++.+. +++.. + |+..++.+|.||
T Consensus 209 ---------------------~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~~-v~~~~-~~~g~~~~i~~D~vv 264 (464)
T 2eq6_A 209 ---------------------DPETAALLRRALEKE-GIRVRTKTKAVGYEKKKDGLH-VRLEP-AEGGEGEEVVVDKVL 264 (464)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEEE-EEEEE-TTCCSCEEEEESEEE
T ss_pred ---------------------CHHHHHHHHHHHHhc-CCEEEcCCEEEEEEEeCCEEE-EEEee-cCCCceeEEEcCEEE
Confidence 012344556666666 79998884 999987776432 44431 4 764567899999
Q ss_pred eecCCcccch
Q 010623 217 VCDGCFSNLR 226 (506)
Q Consensus 217 ~AdG~~S~vR 226 (506)
.|+|..+...
T Consensus 265 ~a~G~~p~~~ 274 (464)
T 2eq6_A 265 VAVGRKPRTE 274 (464)
T ss_dssp ECSCEEESCT
T ss_pred ECCCcccCCC
Confidence 9999887653
No 156
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.40 E-value=5.9e-07 Score=91.58 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~ 94 (506)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 47999999999999999999998 889999999864
No 157
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.39 E-value=3.7e-07 Score=92.53 Aligned_cols=104 Identities=20% Similarity=0.239 Sum_probs=65.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
+|+|||||++|+++|..|++.+ ++|+|||+++.. .+.|...... .|..+ ...
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~-------~~~p~l~~v~--~g~~~---------~~~-------- 57 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF-------GFTPAFPHLA--MGWRK---------FED-------- 57 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE-------ECGGGHHHHH--HTCSC---------GGG--------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC-------ccCccHHHHh--cCCCC---------HHH--------
Confidence 6999999999999999999876 799999998531 1222111111 11110 000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
+.++ + .+.+.+. ++++..++|+++..+...| .+++|++ +.+|+||.|+
T Consensus 58 ---i~~~-----------------~----~~~~~~~-gv~~i~~~v~~Id~~~~~V-----~~~~g~~--i~YD~LViAt 105 (430)
T 3hyw_A 58 ---ISVP-----------------L----APLLPKF-NIEFINEKAESIDPDANTV-----TTQSGKK--IEYDYLVIAT 105 (430)
T ss_dssp ---SEEE-----------------S----TTTGGGG-TEEEECSCEEEEETTTTEE-----EETTCCE--EECSEEEECC
T ss_pred ---hhhc-----------------H----HHHHHHC-CcEEEEeEEEEEECCCCEE-----EECCCCE--EECCEEEEeC
Confidence 0000 0 0111223 7999999999998776642 3577874 6699999999
Q ss_pred CCcc
Q 010623 220 GCFS 223 (506)
Q Consensus 220 G~~S 223 (506)
|...
T Consensus 106 G~~~ 109 (430)
T 3hyw_A 106 GPKL 109 (430)
T ss_dssp CCEE
T ss_pred CCCc
Confidence 9753
No 158
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.39 E-value=1.1e-06 Score=93.01 Aligned_cols=35 Identities=34% Similarity=0.560 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
...+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999984
No 159
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.38 E-value=1.1e-06 Score=90.50 Aligned_cols=32 Identities=34% Similarity=0.509 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCcEEEEec
Q 010623 60 DADVIVVGAGVAGAALANTLAK-DGRRVHVIER 91 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~-~G~~v~vvE~ 91 (506)
++||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 160
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.38 E-value=3.1e-06 Score=84.34 Aligned_cols=100 Identities=20% Similarity=0.283 Sum_probs=75.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+.+|..|++.|.+|+++|+.+.....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 468999999999999999999999999999997532110
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.....+.+.+.+.+++. +++++.++ |+++..+++. +.+...+|+ ++.+|.||.|
T Consensus 184 -------------------~~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~i~~d~vv~a 238 (384)
T 2v3a_A 184 -------------------LLHPAAAKAVQAGLEGL-GVRFHLGPVLASLKKAGEG---LEAHLSDGE--VIPCDLVVSA 238 (384)
T ss_dssp -------------------TSCHHHHHHHHHHHHTT-TCEEEESCCEEEEEEETTE---EEEEETTSC--EEEESEEEEC
T ss_pred -------------------ccCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEecCCE---EEEEECCCC--EEECCEEEEC
Confidence 00113455666677776 78888885 9999877663 445567786 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
+|..+..
T Consensus 239 ~G~~p~~ 245 (384)
T 2v3a_A 239 VGLRPRT 245 (384)
T ss_dssp SCEEECC
T ss_pred cCCCcCH
Confidence 9998865
No 161
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.37 E-value=1.3e-06 Score=90.63 Aligned_cols=34 Identities=35% Similarity=0.486 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|||+||||||+|+++|..+++.|.+|+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 5999999999999999999999999999999875
No 162
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.36 E-value=4.1e-07 Score=91.60 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCc--EEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRR--VHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~--v~vvE~~~~ 94 (506)
.+|+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 4899999999999999999999987 999999864
No 163
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.36 E-value=1.5e-06 Score=88.88 Aligned_cols=34 Identities=38% Similarity=0.569 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.++||+|||||++|+++|..|++.|++|+|+|++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3689999999999999999999999999999997
No 164
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=5.5e-07 Score=93.09 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
++||+|||||++|+++|..|++.|++|+|+|+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999999999999984
No 165
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.34 E-value=1.2e-06 Score=91.14 Aligned_cols=38 Identities=29% Similarity=0.337 Sum_probs=34.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
++.++||+|||||++|+++|+.|++.|++|+|+|+++.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34569999999999999999999999999999999853
No 166
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.33 E-value=1.1e-06 Score=92.33 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSE 95 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~ 95 (506)
.||+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3899999999999999999998 8999999998653
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.33 E-value=1.9e-06 Score=88.25 Aligned_cols=34 Identities=32% Similarity=0.392 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
++||+||||||+|+++|..|++.|++|+|+|+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999975
No 168
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.33 E-value=9.1e-07 Score=91.29 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=32.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEec
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAK-DGRRVHVIER 91 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~-~G~~v~vvE~ 91 (506)
|+.++||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 3346899999999999999999999 9999999994
No 169
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.33 E-value=5e-06 Score=89.38 Aligned_cols=38 Identities=37% Similarity=0.413 Sum_probs=34.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~ 95 (506)
+.++||+|||||++|+++|+.|+++|++|+|+|+++..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998643
No 170
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.31 E-value=7.5e-07 Score=91.90 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=70.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
..+||+|||||++|+++|+.|+++ ++|+|+|+++..... +...+ .... +
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~-----~~~~~------------------~~~~-------g 155 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGD-----MWLKG------------------IKQE-------G 155 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCS-----GGGTC------------------SEET-------T
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCe-----eeccc------------------cccC-------C
Confidence 357999999999999999999999 999999998643211 10000 0000 0
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
++ . ...++...+.+.+ + .+++++.++ |+++..++..+. +. ...+++..++++|.+|.
T Consensus 156 ------~~----------~--~~~~~~~~l~~~l-~-~~v~~~~~~~v~~i~~~~~~~~-~~-~~~~~~~~~~~~d~lvl 213 (493)
T 1y56_A 156 ------FN----------K--DSRKVVEELVGKL-N-ENTKIYLETSALGVFDKGEYFL-VP-VVRGDKLIEILAKRVVL 213 (493)
T ss_dssp ------TT----------E--EHHHHHHHHHHTC-C-TTEEEETTEEECCCEECSSSEE-EE-EEETTEEEEEEESCEEE
T ss_pred ------CC----------C--CHHHHHHHHHHHH-h-cCCEEEcCCEEEEEEcCCcEEE-EE-EecCCeEEEEECCEEEE
Confidence 00 0 1122334444444 3 478887774 888876665432 21 12455545688999999
Q ss_pred ecCCccc
Q 010623 218 CDGCFSN 224 (506)
Q Consensus 218 AdG~~S~ 224 (506)
|+|....
T Consensus 214 AtGa~~~ 220 (493)
T 1y56_A 214 ATGAIDS 220 (493)
T ss_dssp CCCEEEC
T ss_pred CCCCCcc
Confidence 9997653
No 171
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.31 E-value=1.4e-06 Score=88.74 Aligned_cols=34 Identities=32% Similarity=0.433 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.++||+|||||++|+++|..|++.|++|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3589999999999999999999999999999997
No 172
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.30 E-value=3e-07 Score=95.41 Aligned_cols=39 Identities=28% Similarity=0.515 Sum_probs=35.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEecCCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAK-DGRRVHVIERDLSEPD 97 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~-~G~~v~vvE~~~~~~~ 97 (506)
+++||+|||||++||+||+.|++ .|++|+|+|+++....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 46999999999999999999998 5999999999986554
No 173
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.30 E-value=1.1e-06 Score=95.07 Aligned_cols=39 Identities=36% Similarity=0.446 Sum_probs=34.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~ 97 (506)
..+||+|||||++|+++|+.|++.|++|+|+|+.+....
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 358999999999999999999999999999999765443
No 174
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.26 E-value=2.3e-06 Score=86.01 Aligned_cols=36 Identities=28% Similarity=0.520 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~~ 94 (506)
+++||+|||||++|+++|..|++.|. +|+|+|+++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 35899999999999999999999998 4999999864
No 175
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=4.1e-06 Score=85.50 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
++||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 589999999999999999999999999999994
No 176
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.24 E-value=5.4e-06 Score=84.61 Aligned_cols=99 Identities=21% Similarity=0.214 Sum_probs=73.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+...+. .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------~---------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------M---------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------c----------------------
Confidence 357999999999999999999999999999998532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.|.+.+++. +++++.+ +|+++..++++ +.+...+|+ ++.+|.||.|
T Consensus 207 ---------------------~~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~--~i~~D~vv~A 259 (455)
T 2yqu_A 207 ---------------------DLEVSRAAERVFKKQ-GLTIRTGVRVTAVVPEAKG---ARVELEGGE--VLEADRVLVA 259 (455)
T ss_dssp ---------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---EEEEETTSC--EEEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---EEEEECCCe--EEEcCEEEEC
Confidence 012333445555555 7888887 49999887764 445556675 3679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
+|..+..
T Consensus 260 ~G~~p~~ 266 (455)
T 2yqu_A 260 VGRRPYT 266 (455)
T ss_dssp SCEEECC
T ss_pred cCCCcCC
Confidence 9998865
No 177
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=1.6e-06 Score=85.83 Aligned_cols=34 Identities=32% Similarity=0.551 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..||+|||||++|+++|..|++.| +|+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 369999999999999999999999 9999999864
No 178
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.23 E-value=1.5e-06 Score=89.58 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+.+|||||||++|+++|..|++.+++|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 35689999999999999999999999999999985
No 179
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.23 E-value=1.5e-06 Score=86.55 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDG--RRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~ 93 (506)
.++||+|||||++|+++|..|++.| .+|+|+|+++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999999 5799999874
No 180
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.22 E-value=1.7e-06 Score=87.72 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDLS 94 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~~ 94 (506)
+|+||||||+|+++|..|++.| .+|+|+|+++.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 6999999999999999999988 57999999853
No 181
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.21 E-value=3.7e-06 Score=84.28 Aligned_cols=104 Identities=18% Similarity=0.177 Sum_probs=64.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
+|+|||||++|+++|..|++.| .+|+|||+++.. ...+.....+. |..+ ...
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~-------~~~p~~~~v~~--g~~~-~~~---------------- 57 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETY-------YTCYMSNEVIG--GDRE-LAS---------------- 57 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSE-------ECSTTHHHHHH--TSSC-GGG----------------
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCC-------CCccCHHHHhc--CCCC-HHH----------------
Confidence 6999999999999999998876 589999987521 11111111110 1100 000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEeceEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
. ..+ +. .+.+. ++++..++|+++..+...+ ...+|++ +.+|++|.|+
T Consensus 58 ---~--------------~~~---~~-----~~~~~-gv~~i~~~v~~id~~~~~v-----~~~~g~~--i~yd~LviAt 104 (401)
T 3vrd_B 58 ---L--------------RVG---YD-----GLRAH-GIQVVHDSALGIDPDKKLV-----KTAGGAE--FAYDRCVVAP 104 (401)
T ss_dssp ---G--------------EEC---SH-----HHHHT-TCEEECSCEEEEETTTTEE-----EETTSCE--EECSEEEECC
T ss_pred ---H--------------hhC---HH-----HHHHC-CCEEEEeEEEEEEccCcEE-----Eecccce--eecceeeecc
Confidence 0 000 11 11223 7889888999998776532 2567764 6699999999
Q ss_pred CCccc
Q 010623 220 GCFSN 224 (506)
Q Consensus 220 G~~S~ 224 (506)
|....
T Consensus 105 G~~~~ 109 (401)
T 3vrd_B 105 GIDLL 109 (401)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 97653
No 182
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.20 E-value=1.2e-05 Score=77.71 Aligned_cols=100 Identities=21% Similarity=0.239 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------------~--------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA--------------------E--------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC--------------------C---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc--------------------C---------------------
Confidence 35799999999999999999999999999998753210 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeC-C-ccEEEEEcCeEE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTK-A-GEELTAYAPLTI 216 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~-~-G~~~~i~a~~vV 216 (506)
..+.+.+.+.+++. +++++.+ +++++..+++++.+|++.+. + |+..++.+|.||
T Consensus 184 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv 240 (320)
T 1trb_A 184 ----------------------KILIKRLMDKVENG-NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240 (320)
T ss_dssp ----------------------HHHHHHHHHHHHTS-SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEE
T ss_pred ----------------------HHHHHHHHHhcccC-CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEE
Confidence 01233455556665 8999888 49999877767777777652 2 544568899999
Q ss_pred eecCCcc
Q 010623 217 VCDGCFS 223 (506)
Q Consensus 217 ~AdG~~S 223 (506)
.|.|...
T Consensus 241 ~a~G~~p 247 (320)
T 1trb_A 241 VAIGHSP 247 (320)
T ss_dssp ECSCEEE
T ss_pred EEeCCCC
Confidence 9999654
No 183
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.20 E-value=4.5e-06 Score=86.81 Aligned_cols=59 Identities=17% Similarity=0.324 Sum_probs=46.0
Q ss_pred HHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 164 FVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 164 l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
....+...+...++.++..+. |.++..+++++++|.+...++. .++.|+-||.|.|+..
T Consensus 212 ~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~-~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 212 ADAWLTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGS-AEVFADQIVLCAGALE 271 (526)
T ss_dssp HHHHSCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTEE-EEEEEEEEEECSHHHH
T ss_pred ccccccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCce-EEEeecceEEcccccC
Confidence 344455556666789888875 9999999999999998876554 5688999999999764
No 184
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.19 E-value=7.8e-06 Score=85.27 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=43.6
Q ss_pred HHHHHHHHcCCCEEEEece-EEEEEeeC-CeEEEEEEEeC-CccEEEEEcC-eEEeecCCc
Q 010623 166 QRLREKAASLPNVRLEQGT-VTSLLEEK-GTIKGVQYKTK-AGEELTAYAP-LTIVCDGCF 222 (506)
Q Consensus 166 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~~v~~v~v~~~-~G~~~~i~a~-~vV~AdG~~ 222 (506)
..+...+.+.++++++.++ |+++..++ +++++|++... +|+..+++|+ .||.|.|+.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3444444445689999885 99999877 78889988653 2777789998 999999995
No 185
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.19 E-value=6.3e-06 Score=91.70 Aligned_cols=36 Identities=39% Similarity=0.616 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..+||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 358999999999999999999999999999999854
No 186
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.16 E-value=2e-06 Score=88.92 Aligned_cols=63 Identities=29% Similarity=0.366 Sum_probs=47.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCccc-----------c-ccc---ccchHHHHHHhCchhH
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV-----------G-ELL---QPGGYLKLIELGLEDC 120 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~-----------g-~~l---~~~~~~~l~~~g~~~~ 120 (506)
...+||+|||||++||++|+.|+++|++|+|+|+++....+.. | ..+ .+...++++++|+.+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 3468999999999999999999999999999999976543221 1 112 2445678899998754
No 187
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.15 E-value=1.5e-05 Score=81.13 Aligned_cols=100 Identities=26% Similarity=0.337 Sum_probs=72.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+....+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY--------------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc---------------------------------------
Confidence 35799999999999999999999999999999985321100
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
....+.+.+.+.+++. +++++.++ |+++..+ +++..+. . +|+ ++.+|.||.
T Consensus 189 ---------------------~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~v~~v~--~-~~~--~i~~d~vi~ 240 (447)
T 1nhp_A 189 ---------------------LDKEFTDVLTEEMEAN-NITIATGETVERYEGD-GRVQKVV--T-DKN--AYDADLVVV 240 (447)
T ss_dssp ---------------------CCHHHHHHHHHHHHTT-TEEEEESCCEEEEECS-SBCCEEE--E-SSC--EEECSEEEE
T ss_pred ---------------------CCHHHHHHHHHHHHhC-CCEEEcCCEEEEEEcc-CcEEEEE--E-CCC--EEECCEEEE
Confidence 0013455667777776 89999875 9998765 4432233 3 344 467999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|+|.....
T Consensus 241 a~G~~p~~ 248 (447)
T 1nhp_A 241 AVGVRPNT 248 (447)
T ss_dssp CSCEEESC
T ss_pred CcCCCCCh
Confidence 99987654
No 188
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=2.1e-05 Score=80.16 Aligned_cols=102 Identities=20% Similarity=0.286 Sum_probs=73.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+...+. .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------F---------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------c----------------------
Confidence 468999999999999999999999999999998532100 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. +++++.+ +|+++..+++++. +++.. +|+..++.+|.||.|
T Consensus 210 ---------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~~-~g~~~~~~~D~vv~a 265 (455)
T 1ebd_A 210 ---------------------EKQMAAIIKKRLKKK-GVEVVTNALAKGAEEREDGVT-VTYEA-NGETKTIDADYVLVT 265 (455)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEEE-EEEEE-TTEEEEEEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCeEE-EEEEe-CCceeEEEcCEEEEC
Confidence 012334555566666 7888887 4999987766432 44432 333346789999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
+|.....
T Consensus 266 ~G~~p~~ 272 (455)
T 1ebd_A 266 VGRRPNT 272 (455)
T ss_dssp SCEEESC
T ss_pred cCCCccc
Confidence 9987654
No 189
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1.4e-05 Score=78.61 Aligned_cols=99 Identities=19% Similarity=0.257 Sum_probs=73.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||+|++|+-+|..|++.|.+|+++++.+..... +
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-------~---------------------------------- 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH-------G---------------------------------- 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------S----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------H----------------------------------
Confidence 47999999999999999999999999999987532100 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
.+.+.|.+..++. +++++.+ +++++..+++++.+|++...+|+..++.+|.||.|.
T Consensus 203 ----------------------~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~ 259 (360)
T 3ab1_A 203 ----------------------KTAHEVERARANG-TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILI 259 (360)
T ss_dssp ----------------------HHHHSSHHHHHHT-SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECC
T ss_pred ----------------------HHHHHHHHHhhcC-ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECC
Confidence 0111223333444 7999988 599998887877677776567765678899999999
Q ss_pred CCcc
Q 010623 220 GCFS 223 (506)
Q Consensus 220 G~~S 223 (506)
|...
T Consensus 260 G~~p 263 (360)
T 3ab1_A 260 GFKS 263 (360)
T ss_dssp CBCC
T ss_pred CCCC
Confidence 9654
No 190
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.12 E-value=2.6e-05 Score=74.93 Aligned_cols=96 Identities=24% Similarity=0.278 Sum_probs=72.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------------~---------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--------------------D---------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS--------------------C----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc--------------------c----------------------
Confidence 4799999999999999999999999999998753200 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEee
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~A 218 (506)
+.+.+.+.+..+++++.++ ++++..+++++.++++.+ .+|++.++.+|.||.|
T Consensus 183 -------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 237 (310)
T 1fl2_A 183 -------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQ 237 (310)
T ss_dssp -------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEe
Confidence 0122233443489998884 999987767776777766 4576667889999999
Q ss_pred cCCcc
Q 010623 219 DGCFS 223 (506)
Q Consensus 219 dG~~S 223 (506)
.|...
T Consensus 238 ~G~~p 242 (310)
T 1fl2_A 238 IGLLP 242 (310)
T ss_dssp SCEEE
T ss_pred eCCcc
Confidence 98543
No 191
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.12 E-value=1.8e-05 Score=80.99 Aligned_cols=103 Identities=18% Similarity=0.226 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+...+. +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~----------------------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-----L----------------------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----S-----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----C-----------------------------------
Confidence 458999999999999999999999999999998532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHH-HcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKA-ASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~-~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
...+.+.+.+.+ ++. +++++.+ +|+++..+++++ .+++...+|+..++.+|.||.
T Consensus 214 ---------------------d~~~~~~l~~~l~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~i~~D~vv~ 270 (468)
T 2qae_A 214 ---------------------DEDVTNALVGALAKNE-KMKFMTSTKVVGGTNNGDSV-SLEVEGKNGKRETVTCEALLV 270 (468)
T ss_dssp ---------------------CHHHHHHHHHHHHHHT-CCEEECSCEEEEEEECSSSE-EEEEECC---EEEEEESEEEE
T ss_pred ---------------------CHHHHHHHHHHHhhcC-CcEEEeCCEEEEEEEcCCeE-EEEEEcCCCceEEEECCEEEE
Confidence 012334555556 555 7888887 599998766543 244433366445688999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|..+..
T Consensus 271 a~G~~p~~ 278 (468)
T 2qae_A 271 SVGRRPFT 278 (468)
T ss_dssp CSCEEECC
T ss_pred CCCcccCC
Confidence 99988764
No 192
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.12 E-value=1.8e-05 Score=80.89 Aligned_cols=100 Identities=19% Similarity=0.166 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||.+|+-+|..|++.|.+|+|+|+.+..... +.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~--------------------- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------FD--------------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SC---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------cC---------------------
Confidence 357999999999999999999999999999987531100 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+.+++. +++++.++ |+++..++++ +.+...+|++ ++.+|.||.|
T Consensus 207 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~G~~-~i~~D~vv~a 259 (463)
T 2r9z_A 207 ----------------------PLLSATLAENMHAQ-GIETHLEFAVAALERDAQG---TTLVAQDGTR-LEGFDSVIWA 259 (463)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEESSCCEEEEEEETTE---EEEEETTCCE-EEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCe---EEEEEeCCcE-EEEcCEEEEC
Confidence 01223445555555 78898885 9999877664 4455678863 5779999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
+|..+..
T Consensus 260 ~G~~p~~ 266 (463)
T 2r9z_A 260 VGRAPNT 266 (463)
T ss_dssp SCEEESC
T ss_pred CCCCcCC
Confidence 9988765
No 193
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.10 E-value=1.8e-05 Score=83.21 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=44.0
Q ss_pred HHHHHHHcCCCEEEEece-EEEEEeeC----CeEEEEEEEeCCccEEEEEc-CeEEeecCCccc
Q 010623 167 RLREKAASLPNVRLEQGT-VTSLLEEK----GTIKGVQYKTKAGEELTAYA-PLTIVCDGCFSN 224 (506)
Q Consensus 167 ~L~~~~~~~~~v~i~~~~-v~~~~~~~----~~v~~v~v~~~~G~~~~i~a-~~vV~AdG~~S~ 224 (506)
.+...+.+.++++++.++ |+++..++ ++++||++.+.+|+..+++| +-||.|.|+...
T Consensus 235 ~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 235 AWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp HHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCC
Confidence 333333445689999885 99998663 47889998766788788999 999999999754
No 194
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.10 E-value=4.3e-05 Score=73.37 Aligned_cols=97 Identities=18% Similarity=0.139 Sum_probs=71.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~---------------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC-------A---------------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS-------C----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC-------C----------------------------------
Confidence 36899999999999999999999999999998753210 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~ 217 (506)
..+.+.+.+..+++++.++ ++++..+++++.++++.. .+|++.++.+|.||.
T Consensus 182 --------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 235 (311)
T 2q0l_A 182 --------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFI 235 (311)
T ss_dssp --------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEE
Confidence 0012223332389998874 899987767666677654 367666788999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|.|...
T Consensus 236 a~G~~p 241 (311)
T 2q0l_A 236 FVGYDV 241 (311)
T ss_dssp CSCEEE
T ss_pred EecCcc
Confidence 999643
No 195
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.10 E-value=5.9e-06 Score=85.16 Aligned_cols=38 Identities=26% Similarity=0.461 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSE 95 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~ 95 (506)
+..+||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 4468999999999999999999887 8999999998643
No 196
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.09 E-value=2.1e-05 Score=80.68 Aligned_cols=105 Identities=14% Similarity=0.232 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... +.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~---------------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-----MD---------------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----SC----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----cC----------------------------------
Confidence 458999999999999999999999999999998532110 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee-CCeEEEEEEEe-CCccEEEEEcCeEE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKT-KAGEELTAYAPLTI 216 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~~v~v~~-~~G~~~~i~a~~vV 216 (506)
..+.+.+.+.+++. +++++.++ |+++..+ +++...+++.+ .+|+..++.+|.||
T Consensus 224 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv 280 (478)
T 1v59_A 224 ----------------------GEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLL 280 (478)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEE
Confidence 12344555666666 88998884 8998862 33333355442 23433467899999
Q ss_pred eecCCcccch
Q 010623 217 VCDGCFSNLR 226 (506)
Q Consensus 217 ~AdG~~S~vR 226 (506)
.|+|......
T Consensus 281 ~a~G~~p~~~ 290 (478)
T 1v59_A 281 VAVGRRPYIA 290 (478)
T ss_dssp ECSCEEECCT
T ss_pred ECCCCCcCCC
Confidence 9999887654
No 197
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.09 E-value=3.1e-06 Score=87.22 Aligned_cols=40 Identities=33% Similarity=0.385 Sum_probs=35.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~ 97 (506)
+++.||+|||||++||++|+.|++.|++|+|+|+.+....
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 3468999999999999999999999999999999876443
No 198
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.08 E-value=1.2e-05 Score=81.79 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=72.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+..... + .
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~-------------~--------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-----F-------------D--------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----S-------------C---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-----h-------------h---------------------
Confidence 358999999999999999999999999999987531100 0 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+.+++. +++++.++ |+++..++++. +.+...+|+ ++.+|.||.|
T Consensus 208 ----------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~--~i~~D~vv~a 260 (450)
T 1ges_A 208 ----------------------PMISETLVEVMNAE-GPQLHTNAIPKAVVKNTDGS--LTLELEDGR--SETVDCLIWA 260 (450)
T ss_dssp ----------------------HHHHHHHHHHHHHH-SCEEECSCCEEEEEECTTSC--EEEEETTSC--EEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCcE--EEEEECCCc--EEEcCEEEEC
Confidence 01233445555555 78888884 99998765432 344467786 4679999999
Q ss_pred cCCcccch
Q 010623 219 DGCFSNLR 226 (506)
Q Consensus 219 dG~~S~vR 226 (506)
+|..+.+.
T Consensus 261 ~G~~p~~~ 268 (450)
T 1ges_A 261 IGREPAND 268 (450)
T ss_dssp SCEEESCT
T ss_pred CCCCcCCC
Confidence 99887653
No 199
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.08 E-value=3.5e-06 Score=85.02 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G-~~v~vvE~~~~~~ 96 (506)
.++||+|||||++||++|+.|+++| ++|+|+|+++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 3589999999999999999999999 9999999987553
No 200
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.08 E-value=3.1e-05 Score=77.84 Aligned_cols=101 Identities=21% Similarity=0.293 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 4579999999999999999999999999999986421100
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....+.+.+.+.+++. |++++.++ |+++..+++++.+|+ ..+|++ +.||.||.|
T Consensus 192 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~v~--l~dG~~--i~aD~Vv~a 246 (415)
T 3lxd_A 192 --------------------AGEALSEFYQAEHRAH-GVDLRTGAAMDCIEGDGTKVTGVR--MQDGSV--IPADIVIVG 246 (415)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEEETCCEEEEEESSSBEEEEE--ESSSCE--EECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHhC-CCEEEECCEEEEEEecCCcEEEEE--eCCCCE--EEcCEEEEC
Confidence 0112445566666666 78888875 999988777665554 567864 679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 247 ~G~~p~~ 253 (415)
T 3lxd_A 247 IGIVPCV 253 (415)
T ss_dssp SCCEESC
T ss_pred CCCccCh
Confidence 9987754
No 201
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.08 E-value=2.9e-06 Score=83.60 Aligned_cols=37 Identities=27% Similarity=0.514 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC-CCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD-LSE 95 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~-~~~ 95 (506)
..+||+|||||++||++|+.|+++|++|+|+|++ +..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3589999999999999999999999999999998 543
No 202
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.07 E-value=3.1e-05 Score=77.63 Aligned_cols=101 Identities=25% Similarity=0.386 Sum_probs=75.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~---------------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV---------------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------------------------------------
Confidence 3579999999999999999999999999999885321100
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....+.+.+.+.+++. +++++.+ +|+++..+++++.+|+ ..+|+ ++.||.||.|
T Consensus 182 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~V~--~~dG~--~i~aD~Vv~a 236 (404)
T 3fg2_P 182 --------------------VTPEISSYFHDRHSGA-GIRMHYGVRATEIAAEGDRVTGVV--LSDGN--TLPCDLVVVG 236 (404)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSC--EEECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHhC-CcEEEECCEEEEEEecCCcEEEEE--eCCCC--EEEcCEEEEC
Confidence 0112445566666666 8899888 4999988877665554 57786 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 237 ~G~~p~~ 243 (404)
T 3fg2_P 237 VGVIPNV 243 (404)
T ss_dssp CCEEECC
T ss_pred cCCccCH
Confidence 9987653
No 203
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.07 E-value=2.8e-06 Score=85.07 Aligned_cols=38 Identities=34% Similarity=0.498 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKD-GRRVHVIERDLSE 95 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~-G~~v~vvE~~~~~ 95 (506)
+.++||+|||||++||++|+.|++. |++|+|+|+++..
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3468999999999999999999999 9999999998654
No 204
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.07 E-value=2.8e-05 Score=75.56 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=72.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 45799999999999999999999999999998753211
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~ 217 (506)
...+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|+..++.+|.||.
T Consensus 211 -------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 265 (338)
T 3itj_A 211 -------------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFY 265 (338)
T ss_dssp -------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEE
T ss_pred -------------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEE
Confidence 00122233333489998875 999988877777788776 356556788999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|.|...
T Consensus 266 a~G~~p 271 (338)
T 3itj_A 266 AIGHTP 271 (338)
T ss_dssp CSCEEE
T ss_pred EeCCCC
Confidence 999643
No 205
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.06 E-value=5.3e-06 Score=86.49 Aligned_cols=57 Identities=23% Similarity=0.320 Sum_probs=43.1
Q ss_pred HHHHHHHcCCCEEEEece-EEEEEee----C-CeEEEEEEEeCCc-cEEEEEc-CeEEeecCCcc
Q 010623 167 RLREKAASLPNVRLEQGT-VTSLLEE----K-GTIKGVQYKTKAG-EELTAYA-PLTIVCDGCFS 223 (506)
Q Consensus 167 ~L~~~~~~~~~v~i~~~~-v~~~~~~----~-~~v~~v~v~~~~G-~~~~i~a-~~vV~AdG~~S 223 (506)
..+..+.++++.++..++ |+++..+ + ++++||++...+| +.++++| +-||.|.|+..
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHH
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcC
Confidence 334444556799999885 9999876 3 5788999887666 7778889 78999999763
No 206
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.06 E-value=2.9e-06 Score=86.47 Aligned_cols=38 Identities=42% Similarity=0.481 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~ 97 (506)
++||+|||||++||++|+.|++.|++|+|+|+++....
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 57999999999999999999999999999999876543
No 207
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.06 E-value=5.7e-06 Score=83.80 Aligned_cols=40 Identities=25% Similarity=0.433 Sum_probs=35.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
|+.++||+|||||++|+++|..|++.|++|+|+|+++...
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 4456899999999999999999999999999999986544
No 208
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.04 E-value=3.7e-05 Score=79.13 Aligned_cols=103 Identities=25% Similarity=0.370 Sum_probs=75.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+..... .
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 237 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------------------M---------------------- 237 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------------------C----------------------
Confidence 457999999999999999999999999999987532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~vV~ 217 (506)
...+.+.+.+.+++. +++++.++ ++++..+++.+. +++.+. +|+..++.+|.||.
T Consensus 238 ---------------------d~~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~Vi~ 294 (491)
T 3urh_A 238 ---------------------DGEVAKQLQRMLTKQ-GIDFKLGAKVTGAVKSGDGAK-VTFEPVKGGEATTLDAEVVLI 294 (491)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEEE-EEEEETTSCCCEEEEESEEEE
T ss_pred ---------------------CHHHHHHHHHHHHhC-CCEEEECCeEEEEEEeCCEEE-EEEEecCCCceEEEEcCEEEE
Confidence 012344555566665 78888884 999988877543 555543 36445688999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|+|.....
T Consensus 295 a~G~~p~~ 302 (491)
T 3urh_A 295 ATGRKPST 302 (491)
T ss_dssp CCCCEECC
T ss_pred eeCCccCC
Confidence 99987654
No 209
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.03 E-value=4.2e-06 Score=83.21 Aligned_cols=38 Identities=39% Similarity=0.616 Sum_probs=34.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~ 95 (506)
...+||+|||||++||++|+.|++.|.+|+|+|+++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 34699999999999999999999999999999998653
No 210
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.02 E-value=4e-05 Score=78.92 Aligned_cols=102 Identities=23% Similarity=0.297 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~----------------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-----Q----------------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----C-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----C-----------------------------------
Confidence 468999999999999999999999999999998632110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. +.++.++ ++++..+++++. ++..+.+|++.++.+|.||.|
T Consensus 214 ---------------------d~~~~~~l~~~l~~~--V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a 269 (492)
T 3ic9_A 214 ---------------------DEEMKRYAEKTFNEE--FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAA 269 (492)
T ss_dssp ---------------------CHHHHHHHHHHHHTT--SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHhhC--cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEe
Confidence 002334455555553 7788774 889887776544 444444776567889999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 270 ~G~~p~~ 276 (492)
T 3ic9_A 270 TGRKANV 276 (492)
T ss_dssp SCCEESC
T ss_pred eCCccCC
Confidence 9987654
No 211
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.01 E-value=5.4e-05 Score=77.25 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=80.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcc----cccccccchHHHHHHhCchhHHhhcccceecceE
Q 010623 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRI----VGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYA 133 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~~~~~~----~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 133 (506)
.-+|+|||||.+|+-+|..|++. |.+|++++|.+...+.. ......+...+.+..+.......-.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~----- 301 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYH----- 301 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTG-----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhh-----
Confidence 45899999999999999999998 89999999986432211 11112233333333332111000000000
Q ss_pred EEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccEEEEE
Q 010623 134 LFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAY 211 (506)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~~~i~ 211 (506)
...+. ... ..+-.........+.+....++.++.++ |+++..+++++. +++.+. +|+..++.
T Consensus 302 --------~~~~~------~~~-~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~-v~~~~~~~g~~~~~~ 365 (463)
T 3s5w_A 302 --------NTNYS------VVD-TDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIE-LALRDAGSGELSVET 365 (463)
T ss_dssp --------GGTSS------CBC-HHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEE-EEEEETTTCCEEEEE
T ss_pred --------ccCCC------cCC-HHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEE-EEEEEcCCCCeEEEE
Confidence 00000 000 0000111222333444444588998886 899988777543 555543 78777789
Q ss_pred cCeEEeecCCcc
Q 010623 212 APLTIVCDGCFS 223 (506)
Q Consensus 212 a~~vV~AdG~~S 223 (506)
+|.||.|+|...
T Consensus 366 ~D~Vv~AtG~~p 377 (463)
T 3s5w_A 366 YDAVILATGYER 377 (463)
T ss_dssp ESEEEECCCEEC
T ss_pred CCEEEEeeCCCC
Confidence 999999999643
No 212
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.01 E-value=4.3e-05 Score=79.29 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||..|+-+|..|++.|.+|+++|+.+..... .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~----------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------K----------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------C-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------c-----------------------
Confidence 68999999999999999999999999999998532100 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeC-CeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~-~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.|.+.+++. |++++.+ +|+++..++ +++.++.+...+|+ .++.||.||.|
T Consensus 254 --------------------~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD~Vv~A 311 (523)
T 1mo9_A 254 --------------------DNETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETDFVFLG 311 (523)
T ss_dssp --------------------SHHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECSCEEEC
T ss_pred --------------------cHHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcCEEEEC
Confidence 012344556666666 7889888 499998754 44444566677775 35789999999
Q ss_pred cCCcccch
Q 010623 219 DGCFSNLR 226 (506)
Q Consensus 219 dG~~S~vR 226 (506)
+|..+..-
T Consensus 312 ~G~~p~~~ 319 (523)
T 1mo9_A 312 LGEQPRSA 319 (523)
T ss_dssp CCCEECCH
T ss_pred cCCccCCc
Confidence 99988653
No 213
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.00 E-value=4.8e-05 Score=73.00 Aligned_cols=96 Identities=20% Similarity=0.184 Sum_probs=73.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------~-------------~-------------------- 186 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA-------A-------------P-------------------- 186 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS-------C-------------H--------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC-------C-------------H--------------------
Confidence 35799999999999999999999999999998753200 0 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
.+ +.+.+++. +++++.+ ++.++..+++++.++++...+|++.++.+|.||.|
T Consensus 187 -----------------------~~---~~~~~~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a 239 (315)
T 3r9u_A 187 -----------------------ST---VEKVKKNE-KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTF 239 (315)
T ss_dssp -----------------------HH---HHHHHHCT-TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEEC
T ss_pred -----------------------HH---HHHHHhcC-CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEE
Confidence 01 11112333 8999877 59999888878878888766887667889999999
Q ss_pred cCCc
Q 010623 219 DGCF 222 (506)
Q Consensus 219 dG~~ 222 (506)
.|..
T Consensus 240 ~G~~ 243 (315)
T 3r9u_A 240 VGLN 243 (315)
T ss_dssp SCEE
T ss_pred EcCC
Confidence 9964
No 214
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.99 E-value=3.2e-06 Score=87.80 Aligned_cols=38 Identities=34% Similarity=0.518 Sum_probs=34.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEecCCCCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLSEPD 97 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G-~~v~vvE~~~~~~~ 97 (506)
++||+|||||++||+||..|++.| ++|+|+|+++....
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 479999999999999999999999 99999999876544
No 215
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=2.2e-05 Score=80.36 Aligned_cols=103 Identities=17% Similarity=0.266 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...+. .
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------~---------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------M---------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------c----------------------
Confidence 468999999999999999999999999999998532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~vV~ 217 (506)
...+.+.+.+.+++. +++++.++ ++++..+++++. +++.+. +|+..++.+|.||.
T Consensus 217 ---------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~D~vv~ 273 (470)
T 1dxl_A 217 ---------------------DAEIRKQFQRSLEKQ-GMKFKLKTKVVGVDTSGDGVK-LTVEPSAGGEQTIIEADVVLV 273 (470)
T ss_dssp ---------------------CHHHHHHHHHHHHHS-SCCEECSEEEEEEECSSSSEE-EEEEESSSCCCEEEEESEEEC
T ss_pred ---------------------cHHHHHHHHHHHHHc-CCEEEeCCEEEEEEEcCCeEE-EEEEecCCCcceEEECCEEEE
Confidence 002334555566666 78888884 999887655432 444432 45434678999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|.....
T Consensus 274 a~G~~p~~ 281 (470)
T 1dxl_A 274 SAGRTPFT 281 (470)
T ss_dssp CCCEEECC
T ss_pred CCCCCcCC
Confidence 99987754
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=1.7e-05 Score=80.86 Aligned_cols=99 Identities=22% Similarity=0.279 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+...+. + .
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~-------------~--------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-----Y-------------D--------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----S-------------C---------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----c-------------C---------------------
Confidence 358999999999999999999999999999998532110 0 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+.+++. +++++.+ +|+++.. ++ +.+...+|+..++.+|.||.|
T Consensus 212 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~--~~---v~v~~~~G~~~~i~~D~vv~a 263 (458)
T 1lvl_A 212 ----------------------SELTAPVAESLKKL-GIALHLGHSVEGYEN--GC---LLANDGKGGQLRLEADRVLVA 263 (458)
T ss_dssp ----------------------HHHHHHHHHHHHHH-TCEEETTCEEEEEET--TE---EEEECSSSCCCEECCSCEEEC
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEECCEEEEEEe--CC---EEEEECCCceEEEECCEEEEC
Confidence 01233444455555 7888888 4888876 33 334445564345789999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
+|.....
T Consensus 264 ~G~~p~~ 270 (458)
T 1lvl_A 264 VGRRPRT 270 (458)
T ss_dssp CCEEECC
T ss_pred cCCCcCC
Confidence 9987654
No 217
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.95 E-value=3.9e-05 Score=74.01 Aligned_cols=95 Identities=22% Similarity=0.286 Sum_probs=69.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||++|+-+|..|++.|.+|+++++.+.... .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--------------------~---------------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--------------------E---------------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--------------------C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--------------------C----------------------
Confidence 5799999999999999999999999999998752100 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEee
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+. +++++.++ ++++..+++++.++++.+ .+|+..++.+|.||.|
T Consensus 194 -------------------------~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 194 -------------------------NAYVQEIKKR-NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp -------------------------HHHHHHHHHT-TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred -------------------------HHHHHHHhcC-CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 0112222233 78888774 899887766566777764 4676667889999999
Q ss_pred cCCcc
Q 010623 219 DGCFS 223 (506)
Q Consensus 219 dG~~S 223 (506)
.|...
T Consensus 248 ~G~~p 252 (319)
T 3cty_A 248 VGLIP 252 (319)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 98654
No 218
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.94 E-value=5.9e-05 Score=77.28 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=72.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+...++. +
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~---------------------- 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG-----------------I---------------------- 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------C----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------c----------------------
Confidence 3579999999999999999999999999999985321100 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEE---eCCccEEEEEcCeE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYK---TKAGEELTAYAPLT 215 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~---~~~G~~~~i~a~~v 215 (506)
..++.+.+.+.+++. +++++.++ |+++..++++...+++. +.++ .++.+|.|
T Consensus 219 ---------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~--~~i~~D~v 274 (474)
T 1zmd_A 219 ---------------------DMEISKNFQRILQKQ-GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKA--EVITCDVL 274 (474)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTSCEEEEEEETTSCCC--EEEEESEE
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCceEEEEEEcCCceEEEEEEecCCCCc--eEEEcCEE
Confidence 012334555666666 78998885 99998776541224443 2334 35779999
Q ss_pred EeecCCcccc
Q 010623 216 IVCDGCFSNL 225 (506)
Q Consensus 216 V~AdG~~S~v 225 (506)
|.|+|.....
T Consensus 275 v~a~G~~p~~ 284 (474)
T 1zmd_A 275 LVCIGRRPFT 284 (474)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999987654
No 219
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.92 E-value=5.7e-05 Score=76.32 Aligned_cols=101 Identities=21% Similarity=0.277 Sum_probs=72.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+....+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~---------------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----------------------------------------
Confidence 4589999999999999999999999999999875321100
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEe--eCCeEEEEEEEeCCccEEEEEcCeEE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLE--EKGTIKGVQYKTKAGEELTAYAPLTI 216 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~--~~~~v~~v~v~~~~G~~~~i~a~~vV 216 (506)
....+.+.+.+.+++. |++++.++ ++++.. +++++.+|+ ..+|+ ++.+|.||
T Consensus 189 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~v~--~~~G~--~i~~D~Vv 243 (431)
T 1q1r_A 189 --------------------TAPPVSAFYEHLHREA-GVDIRTGTQVCGFEMSTDQQKVTAVL--CEDGT--RLPADLVI 243 (431)
T ss_dssp --------------------SCHHHHHHHHHHHHHH-TCEEECSCCEEEEEECTTTCCEEEEE--ETTSC--EEECSEEE
T ss_pred --------------------hhHHHHHHHHHHHHhC-CeEEEeCCEEEEEEeccCCCcEEEEE--eCCCC--EEEcCEEE
Confidence 0012333445555555 78888884 999886 455554444 56776 36799999
Q ss_pred eecCCcccc
Q 010623 217 VCDGCFSNL 225 (506)
Q Consensus 217 ~AdG~~S~v 225 (506)
.|.|.....
T Consensus 244 ~a~G~~p~~ 252 (431)
T 1q1r_A 244 AGIGLIPNC 252 (431)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCcCc
Confidence 999987653
No 220
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.92 E-value=6.8e-05 Score=72.72 Aligned_cols=97 Identities=20% Similarity=0.244 Sum_probs=70.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--------------------~--------------------- 197 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--------------------S--------------------- 197 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--------------------C---------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--------------------c---------------------
Confidence 45899999999999999999999999999999853210 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCC--eEEEEEEEe-CCccEEEEEcCeE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG--TIKGVQYKT-KAGEELTAYAPLT 215 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~--~v~~v~v~~-~~G~~~~i~a~~v 215 (506)
+.+.+.+.+..+++++.++ ++++..+++ ++.++++.+ .+|+..++.+|.|
T Consensus 198 --------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~v 251 (333)
T 1vdc_A 198 --------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGL 251 (333)
T ss_dssp --------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred --------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEE
Confidence 0111222222389998874 888887664 666677765 3676567889999
Q ss_pred EeecCCcc
Q 010623 216 IVCDGCFS 223 (506)
Q Consensus 216 V~AdG~~S 223 (506)
|.|.|...
T Consensus 252 i~a~G~~p 259 (333)
T 1vdc_A 252 FFAIGHEP 259 (333)
T ss_dssp EECSCEEE
T ss_pred EEEeCCcc
Confidence 99999654
No 221
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.91 E-value=0.0001 Score=71.20 Aligned_cols=95 Identities=22% Similarity=0.271 Sum_probs=69.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||+|.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~----------------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA-------N----------------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-------C-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-------c-----------------------------------
Confidence 5799999999999999999999999999998753210 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEee
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+..+++++.++ ++++..+ +++.+|++.+ .+|+..++.+|.||.|
T Consensus 191 -------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 191 -------------------------KVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp -------------------------HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------hHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 0112223333489998875 8888764 5565677764 4677667889999999
Q ss_pred cCCcc
Q 010623 219 DGCFS 223 (506)
Q Consensus 219 dG~~S 223 (506)
.|...
T Consensus 245 ~G~~p 249 (325)
T 2q7v_A 245 IGHVP 249 (325)
T ss_dssp SCEEE
T ss_pred cCCCC
Confidence 98643
No 222
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.91 E-value=5.1e-05 Score=77.53 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+...+. +.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~--------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------ED--------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SC---------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------cC---------------------
Confidence 358999999999999999999999999999998532110 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+.+++. +++++.+ +++++..+++++. +++. .+|+..++.+|.||.|
T Consensus 212 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~-~~g~~~~~~~D~vv~a 266 (464)
T 2a8x_A 212 ----------------------ADVSKEIEKQFKKL-GVTILTATKVESIADGGSQVT-VTVT-KDGVAQELKAEKVLQA 266 (464)
T ss_dssp ----------------------HHHHHHHHHHHHHH-TCEEECSCEEEEEEECSSCEE-EEEE-SSSCEEEEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHHc-CCEEEeCcEEEEEEEcCCeEE-EEEE-cCCceEEEEcCEEEEC
Confidence 01223344455555 7888887 4999887665432 4332 2565456889999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 267 ~G~~p~~ 273 (464)
T 2a8x_A 267 IGFAPNV 273 (464)
T ss_dssp SCEEECC
T ss_pred CCCCccC
Confidence 9987654
No 223
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.90 E-value=5.6e-05 Score=77.51 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+..... + .
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~-------------d--------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-----F-------------D--------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----S-------------C---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-----c-------------C---------------------
Confidence 357999999999999999999999999999998531110 0 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCe-EEEEEEEeCCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGT-IKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~-v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
..+.+.+.+.+++. +++++.++ |+++..++++ + +.+...+|+ .++.+|.||.
T Consensus 226 ----------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~--~~v~~~~G~-~~i~~D~vv~ 279 (479)
T 2hqm_A 226 ----------------------ECIQNTITDHYVKE-GINVHKLSKIVKVEKNVETDK--LKIHMNDSK-SIDDVDELIW 279 (479)
T ss_dssp ----------------------HHHHHHHHHHHHHH-TCEEECSCCEEEEEECC-CCC--EEEEETTSC-EEEEESEEEE
T ss_pred ----------------------HHHHHHHHHHHHhC-CeEEEeCCEEEEEEEcCCCcE--EEEEECCCc-EEEEcCEEEE
Confidence 01223444445555 78898885 9999865442 2 334456773 3577999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|.....
T Consensus 280 a~G~~p~~ 287 (479)
T 2hqm_A 280 TIGRKSHL 287 (479)
T ss_dssp CSCEEECC
T ss_pred CCCCCCcc
Confidence 99987765
No 224
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.90 E-value=0.0001 Score=75.52 Aligned_cols=102 Identities=21% Similarity=0.211 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.....
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 218 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA----------------------------------------- 218 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-----------------------------------------
Confidence 457999999999999999999999999999997531100
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....+.+.+.+.+++. ++.++.+ +++++..+++++. +++.+.+| ..++.+|.||.|
T Consensus 219 --------------------~~~~~~~~l~~~l~~~-Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g-~~~~~~D~vi~a 275 (476)
T 3lad_A 219 --------------------VDEQVAKEAQKILTKQ-GLKILLGARVTGTEVKNKQVT-VKFVDAEG-EKSQAFDKLIVA 275 (476)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TEEEEETCEEEEEEECSSCEE-EEEESSSE-EEEEEESEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHhC-CCEEEECCEEEEEEEcCCEEE-EEEEeCCC-cEEEECCEEEEe
Confidence 0012344555566665 8999888 4999987766543 55555455 346789999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 276 ~G~~p~~ 282 (476)
T 3lad_A 276 VGRRPVT 282 (476)
T ss_dssp SCEEECC
T ss_pred eCCcccC
Confidence 9987654
No 225
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.89 E-value=7.3e-05 Score=76.88 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=73.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 60 DADVIVVGAGVAGAALANTLAKD---GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~---G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
.-+|+|||||..|+-+|..|++. |.+|+++|+.+...+. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-----~-------------------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-----F-------------------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-----S--------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-----c--------------------------------
Confidence 35899999999999999999999 9999999998531100 0
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
...+.+.+.+.+++. +++++.++ |+++..++++. +.+...+|+ ++.+|.|
T Consensus 230 ------------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~--~i~~D~v 280 (490)
T 1fec_A 230 ------------------------DSELRKQLTEQLRAN-GINVRTHENPAKVTKNADGT--RHVVFESGA--EADYDVV 280 (490)
T ss_dssp ------------------------CHHHHHHHHHHHHHT-TEEEEETCCEEEEEECTTSC--EEEEETTSC--EEEESEE
T ss_pred ------------------------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCE--EEEEECCCc--EEEcCEE
Confidence 002334556666666 89999885 99998765432 334466786 4679999
Q ss_pred EeecCCcccc
Q 010623 216 IVCDGCFSNL 225 (506)
Q Consensus 216 V~AdG~~S~v 225 (506)
|.|.|.....
T Consensus 281 v~a~G~~p~~ 290 (490)
T 1fec_A 281 MLAIGRVPRS 290 (490)
T ss_dssp EECSCEEESC
T ss_pred EEccCCCcCc
Confidence 9999987754
No 226
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.88 E-value=7e-06 Score=81.17 Aligned_cols=36 Identities=42% Similarity=0.514 Sum_probs=33.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
+||+|||||++|+++|..|++.|++|+|+|+++...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 699999999999999999999999999999986543
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.87 E-value=7.8e-05 Score=72.39 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||.+|+-+|..|++.|.+|+++++.+..... .
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~-------------------~--------------------- 191 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH-------------------E--------------------- 191 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC-------------------H---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc-------------------H---------------------
Confidence 358999999999999999999999999999987532100 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeC-CccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~vV~ 217 (506)
.+.+.|.+.+++. +++++.+ ++.++..+ +++.+|++... +|+..++.+|.||.
T Consensus 192 -----------------------~~~~~l~~~l~~~-gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 192 -----------------------ASVKELMKAHEEG-RLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp -----------------------HHHHHHHHHHHTT-SSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred -----------------------HHHHHHHhccccC-CeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEE
Confidence 0112344455555 7888888 48888774 55555666543 67656788999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|.|...
T Consensus 247 a~G~~p 252 (335)
T 2zbw_A 247 LAGYIT 252 (335)
T ss_dssp CCCEEE
T ss_pred eecCCC
Confidence 999754
No 228
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.87 E-value=8.6e-05 Score=75.53 Aligned_cols=100 Identities=21% Similarity=0.331 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+....+. +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~---------------------- 189 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY-----------------F---------------------- 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------S----------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------h----------------------
Confidence 3579999999999999999999999999999975321100 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. +++++.++ |+++..+++++..+. . +|+ ++.+|.||.|
T Consensus 190 ---------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~~v~--~-~g~--~i~~D~vv~a 242 (452)
T 2cdu_A 190 ---------------------DKEFTDILAKDYEAH-GVNLVLGSKVAAFEEVDDEIITKT--L-DGK--EIKSDIAILC 242 (452)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEEESSCEEEEEEETTEEEEEE--T-TSC--EEEESEEEEC
T ss_pred ---------------------hhhHHHHHHHHHHHC-CCEEEcCCeeEEEEcCCCeEEEEE--e-CCC--EEECCEEEEC
Confidence 012344555666666 78888884 999987666554333 3 665 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 243 ~G~~p~~ 249 (452)
T 2cdu_A 243 IGFRPNT 249 (452)
T ss_dssp CCEEECC
T ss_pred cCCCCCH
Confidence 9987654
No 229
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.87 E-value=8.2e-05 Score=76.73 Aligned_cols=101 Identities=14% Similarity=0.176 Sum_probs=72.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d--------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------FD--------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------SC---------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------cc---------------------
Confidence 457999999999999999999999999999997531110 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+.+++. +++++.++ ++++..++++. +.+...+|++ ++.+|.||.|
T Consensus 217 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~-~~~~D~vi~a 270 (500)
T 1onf_A 217 ----------------------ESVINVLENDMKKN-NINIVTFADVVEIKKVSDKN--LSIHLSDGRI-YEHFDHVIYC 270 (500)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEECSCCEEEEEESSTTC--EEEEETTSCE-EEEESEEEEC
T ss_pred ----------------------hhhHHHHHHHHHhC-CCEEEECCEEEEEEEcCCce--EEEEECCCcE-EEECCEEEEC
Confidence 01333455556665 78888885 99998754331 3444667865 3779999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 271 ~G~~p~~ 277 (500)
T 1onf_A 271 VGRSPDT 277 (500)
T ss_dssp CCBCCTT
T ss_pred CCCCcCC
Confidence 9987654
No 230
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.85 E-value=4.6e-05 Score=76.48 Aligned_cols=100 Identities=26% Similarity=0.330 Sum_probs=71.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+.... + .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~---------~---~~--------------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV---------R---VL--------------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH---------H---HH---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch---------h---hc---------------------------
Confidence 46899999999999999999999999999999853210 0 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. +++++.++ |+++..++ ++. .+...+|++ +.||.||.|
T Consensus 184 ---------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~-~~~--~v~~~dg~~--i~aD~Vv~a 236 (410)
T 3ef6_A 184 ---------------------GRRIGAWLRGLLTEL-GVQVELGTGVVGFSGEG-QLE--QVMASDGRS--FVADSALIC 236 (410)
T ss_dssp ---------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEECSS-SCC--EEEETTSCE--EECSEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEeccC-cEE--EEEECCCCE--EEcCEEEEe
Confidence 012334455555555 88898775 88887654 332 344677864 669999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 237 ~G~~p~~ 243 (410)
T 3ef6_A 237 VGAEPAD 243 (410)
T ss_dssp SCEEECC
T ss_pred eCCeecH
Confidence 9988754
No 231
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.84 E-value=1.2e-05 Score=79.89 Aligned_cols=37 Identities=32% Similarity=0.642 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
++||+|||||++|+++|..|++.|++|+|+|+++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999986543
No 232
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.84 E-value=0.00017 Score=73.27 Aligned_cols=99 Identities=20% Similarity=0.191 Sum_probs=73.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+......
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY---------------------------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----------------------------------------
Confidence 3579999999999999999999999999999985321100
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....+.+.+.+.+++. +++++.++ |+++..+++++ .+..++| ++.||.||.|
T Consensus 187 --------------------~d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v---~v~~~~g---~i~aD~Vv~A 239 (452)
T 3oc4_A 187 --------------------FDKEMVAEVQKSLEKQ-AVIFHFEETVLGIEETANGI---VLETSEQ---EISCDSGIFA 239 (452)
T ss_dssp --------------------CCHHHHHHHHHHHHTT-TEEEEETCCEEEEEECSSCE---EEEESSC---EEEESEEEEC
T ss_pred --------------------CCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEccCCeE---EEEECCC---EEEeCEEEEC
Confidence 0012445666666666 89999885 99998766654 3445555 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 240 ~G~~p~~ 246 (452)
T 3oc4_A 240 LNLHPQL 246 (452)
T ss_dssp SCCBCCC
T ss_pred cCCCCCh
Confidence 9987643
No 233
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.83 E-value=7.6e-05 Score=76.61 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=72.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+..... +.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~--------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------AD--------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------cC---------------------
Confidence 468999999999999999999999999999988532110 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCC--ccEEEEEcCeEE
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKA--GEELTAYAPLTI 216 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~--G~~~~i~a~~vV 216 (506)
..+.+.+.+.+++. +++++.+ +++++..+++.+ .+++.+.+ |++ +.+|.||
T Consensus 226 ----------------------~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~--~~~D~vv 279 (482)
T 1ojt_A 226 ----------------------RDLVKVWQKQNEYR-FDNIMVNTKTVAVEPKEDGV-YVTFEGANAPKEP--QRYDAVL 279 (482)
T ss_dssp ----------------------HHHHHHHHHHHGGG-EEEEECSCEEEEEEEETTEE-EEEEESSSCCSSC--EEESCEE
T ss_pred ----------------------HHHHHHHHHHHHhc-CCEEEECCEEEEEEEcCCeE-EEEEeccCCCceE--EEcCEEE
Confidence 02334555666665 8999988 499998776643 24443211 543 5699999
Q ss_pred eecCCcccc
Q 010623 217 VCDGCFSNL 225 (506)
Q Consensus 217 ~AdG~~S~v 225 (506)
.|.|.....
T Consensus 280 ~a~G~~p~~ 288 (482)
T 1ojt_A 280 VAAGRAPNG 288 (482)
T ss_dssp ECCCEEECG
T ss_pred ECcCCCcCC
Confidence 999988765
No 234
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.82 E-value=1.2e-05 Score=82.88 Aligned_cols=38 Identities=37% Similarity=0.524 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~ 97 (506)
..||+|||||++||++|..|+++|++|+|+|+++....
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 57999999999999999999999999999999875443
No 235
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.81 E-value=1.8e-05 Score=80.55 Aligned_cols=36 Identities=42% Similarity=0.501 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
...||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 357999999999999999999999999999999864
No 236
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.81 E-value=1e-05 Score=83.33 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
++||+||||||+|+++|..|++.|++|+|+|+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999964
No 237
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.81 E-value=0.00014 Score=72.81 Aligned_cols=96 Identities=25% Similarity=0.304 Sum_probs=69.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA---------------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----------------------------------------
Confidence 4689999999999999999999999999999985321100
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
....+.+.+.+.+++. +++++.++ ++++. ++ .|+ ..+|+ ++.||.||.|
T Consensus 185 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~--~~---~v~--~~~g~--~i~~D~vi~a 234 (408)
T 2gqw_A 185 --------------------APATLADFVARYHAAQ-GVDLRFERSVTGSV--DG---VVL--LDDGT--RIAADMVVVG 234 (408)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEEESCCEEEEE--TT---EEE--ETTSC--EEECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHHc-CcEEEeCCEEEEEE--CC---EEE--ECCCC--EEEcCEEEEC
Confidence 0012334555566666 78888884 98887 33 233 46776 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 235 ~G~~p~~ 241 (408)
T 2gqw_A 235 IGVLAND 241 (408)
T ss_dssp SCEEECC
T ss_pred cCCCccH
Confidence 9987653
No 238
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.81 E-value=0.0001 Score=75.96 Aligned_cols=99 Identities=22% Similarity=0.244 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+..... +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~----------------------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----E----------------------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----S-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----c-----------------------------------
Confidence 468999999999999999999999999999998532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. |++++.++ |+++..++++ +.+.+.+|++ +.+|.||.|
T Consensus 222 ---------------------d~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~aD~Vv~a 274 (499)
T 1xdi_A 222 ---------------------DADAALVLEESFAER-GVRLFKNARAASVTRTGAG---VLVTMTDGRT--VEGSHALMT 274 (499)
T ss_dssp ---------------------SHHHHHHHHHHHHHT-TCEEETTCCEEEEEECSSS---EEEEETTSCE--EEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCE---EEEEECCCcE--EEcCEEEEC
Confidence 002334555666666 88998885 9999877654 3455667763 679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|..+..
T Consensus 275 ~G~~p~~ 281 (499)
T 1xdi_A 275 IGSVPNT 281 (499)
T ss_dssp CCEEECC
T ss_pred CCCCcCC
Confidence 9988765
No 239
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.80 E-value=0.00011 Score=75.53 Aligned_cols=99 Identities=20% Similarity=0.280 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+. +
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~---------------------- 234 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY-----------------Y---------------------- 234 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------S----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------H----------------------
Confidence 4579999999999999999999999999999985321100 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. +++++.++ ++++.. ++++..+. . +|+ ++.+|.||.|
T Consensus 235 ---------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~-~~~v~~v~--~-~g~--~i~~D~Vi~a 286 (490)
T 2bc0_A 235 ---------------------DRDLTDLMAKNMEEH-GIQLAFGETVKEVAG-NGKVEKII--T-DKN--EYDVDMVILA 286 (490)
T ss_dssp ---------------------CHHHHHHHHHHHHTT-TCEEEETCCEEEEEC-SSSCCEEE--E-SSC--EEECSEEEEC
T ss_pred ---------------------HHHHHHHHHHHHHhC-CeEEEeCCEEEEEEc-CCcEEEEE--E-CCc--EEECCEEEEC
Confidence 012444566666666 88998885 999876 44333333 2 565 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 287 ~G~~p~~ 293 (490)
T 2bc0_A 287 VGFRPNT 293 (490)
T ss_dssp CCEEECC
T ss_pred CCCCcCh
Confidence 9987654
No 240
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.80 E-value=1.8e-05 Score=81.24 Aligned_cols=38 Identities=24% Similarity=0.433 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G-~~v~vvE~~~~~~ 96 (506)
+.+||+|||||++||++|+.|+++| .+|+|+|+++...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 3589999999999999999999999 7999999987543
No 241
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.79 E-value=0.00018 Score=74.55 Aligned_cols=95 Identities=24% Similarity=0.284 Sum_probs=72.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---------~--------------------------------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------D--------------------------------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---------C---------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---------C---------------------------------
Confidence 5799999999999999999999999999998753110 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEee
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+..+++++.++ ++++..+++++.++++.+ .+|++.++.+|.||.|
T Consensus 394 -------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 448 (521)
T 1hyu_A 394 -------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQ 448 (521)
T ss_dssp -------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEEC
Confidence 0123334443589998885 889887777777787766 4677677899999999
Q ss_pred cCCc
Q 010623 219 DGCF 222 (506)
Q Consensus 219 dG~~ 222 (506)
.|..
T Consensus 449 ~G~~ 452 (521)
T 1hyu_A 449 IGLL 452 (521)
T ss_dssp CCEE
T ss_pred cCCC
Confidence 9954
No 242
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.79 E-value=0.0001 Score=75.46 Aligned_cols=100 Identities=25% Similarity=0.286 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 60 DADVIVVGAGVAGAALANTLAKD-GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~-G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
.-+|+|||||.+|+-+|..|++. |.+|+++|+.+....+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF--------------------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT---------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc---------------------------------------
Confidence 35899999999999999999999 99999999875321100
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
....+.+.+.+.+++. +++++.+ +|+++..+++++. +...+|+ ++.+|.||.
T Consensus 200 ---------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~---v~~~~g~--~i~aD~Vv~ 252 (472)
T 3iwa_A 200 ---------------------TSKSLSQMLRHDLEKN-DVVVHTGEKVVRLEGENGKVA---RVITDKR--TLDADLVIL 252 (472)
T ss_dssp ---------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEE---EEEESSC--EEECSEEEE
T ss_pred ---------------------cCHHHHHHHHHHHHhc-CCEEEeCCEEEEEEccCCeEE---EEEeCCC--EEEcCEEEE
Confidence 0012445566666666 7889888 4999987666543 4455676 467999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|.....
T Consensus 253 a~G~~p~~ 260 (472)
T 3iwa_A 253 AAGVSPNT 260 (472)
T ss_dssp CSCEEECC
T ss_pred CCCCCcCH
Confidence 99987653
No 243
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=0.00023 Score=73.16 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++++... +. .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~---------l~----------~~d--------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP---------LR----------GFD--------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS---------ST----------TSC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc---------cc----------cCC---------------------
Confidence 35799999999999999999999999999998631 00 000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~vV~ 217 (506)
.++.+.+.+.+++. ++.++.++ +.++...+++...+++.+. +|+..++.+|.||.
T Consensus 225 ----------------------~~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~ 281 (488)
T 3dgz_A 225 ----------------------QQMSSLVTEHMESH-GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLW 281 (488)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEE
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEE
Confidence 01334455556665 78888884 8888875443233555543 36656688999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|.....
T Consensus 282 a~G~~p~~ 289 (488)
T 3dgz_A 282 AIGRVPET 289 (488)
T ss_dssp CSCEEESC
T ss_pred cccCCccc
Confidence 99976544
No 244
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.75 E-value=0.0002 Score=75.02 Aligned_cols=98 Identities=19% Similarity=0.249 Sum_probs=70.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||.+|+-+|..|++.|.+|+++|+.+..... +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~------------------------------------ 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-----V------------------------------------ 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----S------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----c------------------------------------
Confidence 48999999999999999999999999999997532110 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee-------------------CCeEEEEEE
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE-------------------KGTIKGVQY 200 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-------------------~~~v~~v~v 200 (506)
...+.+.+.+.+++. ++.++.++ ++++..+ +++ +.+
T Consensus 191 --------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~v 246 (565)
T 3ntd_A 191 --------------------DREMAGFAHQAIRDQ-GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH---LSL 246 (565)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE---EEE
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCCeEEEEeccccccccccccccccccccCCCc---EEE
Confidence 001233445555555 78888774 8888763 443 444
Q ss_pred EeCCccEEEEEcCeEEeecCCcccc
Q 010623 201 KTKAGEELTAYAPLTIVCDGCFSNL 225 (506)
Q Consensus 201 ~~~~G~~~~i~a~~vV~AdG~~S~v 225 (506)
...+|+ ++.||.||.|.|.....
T Consensus 247 ~~~~g~--~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 247 TLSNGE--LLETDLLIMAIGVRPET 269 (565)
T ss_dssp EETTSC--EEEESEEEECSCEEECC
T ss_pred EEcCCC--EEEcCEEEECcCCccch
Confidence 457776 46799999999987654
No 245
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.73 E-value=0.00019 Score=73.36 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=71.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+..-+ ..
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~---------------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------ED---------------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------SC----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------CC----------------------------------
Confidence 35799999999999999999999999999999753111 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
..+.+.+.+.+++. +++++.++ |+++..+++. +.+..+ +. ++.+|.||.|
T Consensus 216 ----------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~---~~v~~~-~~--~i~aD~Vv~a 266 (467)
T 1zk7_A 216 ----------------------PAIGEAVTAAFRAE-GIEVLEHTQASQVAHMDGE---FVLTTT-HG--ELRADKLLVA 266 (467)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEETTCCEEEEEEETTE---EEEEET-TE--EEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCE---EEEEEC-Cc--EEEcCEEEEC
Confidence 02334555566666 78888874 9999877653 233344 33 4779999999
Q ss_pred cCCcccch
Q 010623 219 DGCFSNLR 226 (506)
Q Consensus 219 dG~~S~vR 226 (506)
.|.++...
T Consensus 267 ~G~~p~~~ 274 (467)
T 1zk7_A 267 TGRTPNTR 274 (467)
T ss_dssp SCEEESCT
T ss_pred CCCCcCCC
Confidence 99987653
No 246
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.73 E-value=0.00022 Score=73.12 Aligned_cols=103 Identities=21% Similarity=0.238 Sum_probs=72.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++++... +. .+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~---------l~----------~~d--------------------- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV---------LR----------GFD--------------------- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS---------ST----------TSC---------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC---------Cc----------ccC---------------------
Confidence 35799999999999999999999999999997521 00 000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~~~i~a~~vV~ 217 (506)
.++.+.+.+.+++. +++++.++ ++++..++++...|++.+. +|+..++.+|.||.
T Consensus 227 ----------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~ 283 (483)
T 3dgh_A 227 ----------------------QQMAELVAASMEER-GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLW 283 (483)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEE
T ss_pred ----------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEE
Confidence 02334455556665 78888885 8898875543223555543 35556788999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|.....
T Consensus 284 a~G~~p~~ 291 (483)
T 3dgh_A 284 AIGRKGLV 291 (483)
T ss_dssp CSCEEECC
T ss_pred CcccccCc
Confidence 99976543
No 247
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.73 E-value=0.00017 Score=74.26 Aligned_cols=100 Identities=11% Similarity=0.157 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 60 DADVIVVGAGVAGAALANTLAKD---GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~---G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
.-+|+|||||..|+-+|..|++. |.+|+|+|+.+..... +.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d------------------ 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------FD------------------ 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------SC------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------cC------------------
Confidence 35899999999999999999999 9999999987532110 00
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
..+.+.+.+.+++. +++++.++ |+++..++++. +.+...+|+ ++.+|.|
T Consensus 235 -------------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~--~i~~D~v 284 (495)
T 2wpf_A 235 -------------------------ETIREEVTKQLTAN-GIEIMTNENPAKVSLNTDGS--KHVTFESGK--TLDVDVV 284 (495)
T ss_dssp -------------------------HHHHHHHHHHHHHT-TCEEEESCCEEEEEECTTSC--EEEEETTSC--EEEESEE
T ss_pred -------------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCce--EEEEECCCc--EEEcCEE
Confidence 01333455556666 78888884 99998765432 334456786 4679999
Q ss_pred EeecCCcccc
Q 010623 216 IVCDGCFSNL 225 (506)
Q Consensus 216 V~AdG~~S~v 225 (506)
|.|.|....+
T Consensus 285 v~a~G~~p~~ 294 (495)
T 2wpf_A 285 MMAIGRIPRT 294 (495)
T ss_dssp EECSCEEECC
T ss_pred EECCCCcccc
Confidence 9999987654
No 248
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.72 E-value=0.0003 Score=67.53 Aligned_cols=96 Identities=21% Similarity=0.189 Sum_probs=70.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+..... +
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~--------------------~-------------------- 193 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQ--------------------P-------------------- 193 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSC--------------------H--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcC--------------------H--------------------
Confidence 467999999999999999999999999999987532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~ 217 (506)
.+.+.+.+..+++++.++ ++++..+ +++.++++.+ .+|+..++.+|.||.
T Consensus 194 ---------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~ 245 (323)
T 3f8d_A 194 ---------------------------IYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFI 245 (323)
T ss_dssp ---------------------------HHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ---------------------------HHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEE
Confidence 111223333489998885 8888766 4455677665 457766788999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|.|...
T Consensus 246 a~G~~p 251 (323)
T 3f8d_A 246 EIGFDP 251 (323)
T ss_dssp CCCEEC
T ss_pred EECCCC
Confidence 999654
No 249
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.71 E-value=0.00015 Score=71.47 Aligned_cols=92 Identities=23% Similarity=0.346 Sum_probs=67.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||++|+-+|..|++.|.+|+++|+.+.... +.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~----------------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LD----------------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CC-----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CC-----------------------------------
Confidence 5799999999999999999999999999999853211 00
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
..+.+.+.+.+++. +++++.++ ++++. .+ +++ .++|+ +.+|.||.|.
T Consensus 183 ---------------------~~~~~~l~~~l~~~-gV~i~~~~~v~~i~--~~---~v~--~~~g~---i~~D~vi~a~ 230 (367)
T 1xhc_A 183 ---------------------EELSNMIKDMLEET-GVKFFLNSELLEAN--EE---GVL--TNSGF---IEGKVKICAI 230 (367)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TEEEECSCCEEEEC--SS---EEE--ETTEE---EECSCEEEEC
T ss_pred ---------------------HHHHHHHHHHHHHC-CCEEEcCCEEEEEE--ee---EEE--ECCCE---EEcCEEEECc
Confidence 01333455555666 89998884 88886 22 233 45674 6799999999
Q ss_pred CCcccc
Q 010623 220 GCFSNL 225 (506)
Q Consensus 220 G~~S~v 225 (506)
|.....
T Consensus 231 G~~p~~ 236 (367)
T 1xhc_A 231 GIVPNV 236 (367)
T ss_dssp CEEECC
T ss_pred CCCcCH
Confidence 987654
No 250
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.71 E-value=0.00013 Score=74.77 Aligned_cols=99 Identities=23% Similarity=0.337 Sum_probs=70.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
..-+|+|||||++|+-+|..|++.|.+|+++|+.+.... .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~~--------------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT------------------IY--------------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS------------------SS---------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh------------------cC---------------------
Confidence 346899999999999999999999999999998742110 00
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
...+.+.+.+.+++. +++++.++ |+++..+ +++..+. .. +. ++.+|.||.
T Consensus 226 ----------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~v~~v~--~~-~~--~i~~D~vi~ 276 (480)
T 3cgb_A 226 ----------------------DGDMAEYIYKEADKH-HIEILTNENVKAFKGN-ERVEAVE--TD-KG--TYKADLVLV 276 (480)
T ss_dssp ----------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SBEEEEE--ET-TE--EEECSEEEE
T ss_pred ----------------------CHHHHHHHHHHHHHc-CcEEEcCCEEEEEEcC-CcEEEEE--EC-CC--EEEcCEEEE
Confidence 012344566666666 78888774 8888765 4443333 33 33 477999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|+|.....
T Consensus 277 a~G~~p~~ 284 (480)
T 3cgb_A 277 SVGVKPNT 284 (480)
T ss_dssp CSCEEESC
T ss_pred CcCCCcCh
Confidence 99987653
No 251
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.67 E-value=0.00031 Score=72.19 Aligned_cols=99 Identities=21% Similarity=0.266 Sum_probs=71.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH----CCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEE
Q 010623 61 ADVIVVGAGVAGAALANTLAK----DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~----~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 136 (506)
-+|+|||||..|+-+|..|++ .|.+|+++++.+....+. +
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~----l-------------------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI----L-------------------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT----S--------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc----C--------------------------------
Confidence 579999999999999999987 478999998874211000 0
Q ss_pred CCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeE
Q 010623 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (506)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~v 215 (506)
...+.+.+.+.+++. +++++.++ |+++..+++. +.+...+|+ ++.||.|
T Consensus 225 ------------------------~~~~~~~~~~~l~~~-GV~v~~~~~V~~i~~~~~~---~~v~l~dG~--~i~aD~V 274 (493)
T 1m6i_A 225 ------------------------PEYLSNWTMEKVRRE-GVKVMPNAIVQSVGVSSGK---LLIKLKDGR--KVETDHI 274 (493)
T ss_dssp ------------------------CHHHHHHHHHHHHTT-TCEEECSCCEEEEEEETTE---EEEEETTSC--EEEESEE
T ss_pred ------------------------CHHHHHHHHHHHHhc-CCEEEeCCEEEEEEecCCe---EEEEECCCC--EEECCEE
Confidence 012334555666666 89998884 9999877664 345567886 4679999
Q ss_pred EeecCCcccc
Q 010623 216 IVCDGCFSNL 225 (506)
Q Consensus 216 V~AdG~~S~v 225 (506)
|.|.|.....
T Consensus 275 v~a~G~~pn~ 284 (493)
T 1m6i_A 275 VAAVGLEPNV 284 (493)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCccH
Confidence 9999987653
No 252
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.66 E-value=0.00039 Score=71.19 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++++.+..... .
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------F---------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------S----------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------c----------------------
Confidence 358999999999999999999999999999987531100 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCC---ccE--EEEEcC
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKA---GEE--LTAYAP 213 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~---G~~--~~i~a~ 213 (506)
...+.+.+.+.+++. +++++.++ ++++..++++.. +.+...+ |+. .++.+|
T Consensus 227 ---------------------d~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~g~~~~~D 283 (478)
T 3dk9_A 227 ---------------------DSMISTNCTEELENA-GVEVLKFSQVKEVKKTLSGLE-VSMVTAVPGRLPVMTMIPDVD 283 (478)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEETTEEEEEEEECSSSEE-EEEEECCTTSCCEEEEEEEES
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcE-EEEEEccCCCCcccceEEEcC
Confidence 011334455555555 88998885 889887655411 3333332 332 467899
Q ss_pred eEEeecCCcccc
Q 010623 214 LTIVCDGCFSNL 225 (506)
Q Consensus 214 ~vV~AdG~~S~v 225 (506)
.||.|.|.....
T Consensus 284 ~vi~a~G~~p~~ 295 (478)
T 3dk9_A 284 CLLWAIGRVPNT 295 (478)
T ss_dssp EEEECSCEEESC
T ss_pred EEEEeeccccCC
Confidence 999999976544
No 253
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.66 E-value=0.00039 Score=71.98 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=73.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (506)
.+-+++|||||..|+-.|..+++.|.+|+|+++... +. +..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~---------L~----------~~D-------------------- 262 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV---------LR----------GFD-------------------- 262 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS---------ST----------TSC--------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc---------cc----------ccc--------------------
Confidence 346899999999999999999999999999987521 00 000
Q ss_pred ceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
.++...+.+.+++. ++.++.+. +.++...++. +.+...++++ +.+|.|+.
T Consensus 263 -----------------------~ei~~~l~~~l~~~-gi~~~~~~~v~~~~~~~~~---~~v~~~~~~~--~~~D~vLv 313 (542)
T 4b1b_A 263 -----------------------QQCAVKVKLYMEEQ-GVMFKNGILPKKLTKMDDK---ILVEFSDKTS--ELYDTVLY 313 (542)
T ss_dssp -----------------------HHHHHHHHHHHHHT-TCEEEETCCEEEEEEETTE---EEEEETTSCE--EEESEEEE
T ss_pred -----------------------hhHHHHHHHHHHhh-cceeecceEEEEEEecCCe---EEEEEcCCCe--EEEEEEEE
Confidence 12344556666666 78888885 8999888884 4455666664 45999999
Q ss_pred ecCCcccc
Q 010623 218 CDGCFSNL 225 (506)
Q Consensus 218 AdG~~S~v 225 (506)
|.|..-++
T Consensus 314 AvGR~Pnt 321 (542)
T 4b1b_A 314 AIGRKGDI 321 (542)
T ss_dssp CSCEEESC
T ss_pred cccccCCc
Confidence 99987655
No 254
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.64 E-value=3.7e-05 Score=78.69 Aligned_cols=38 Identities=32% Similarity=0.454 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~~~~ 96 (506)
.++||+|||||++|+++|+.|++.|+ +|+|+|+++...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 35899999999999999999999999 899999986543
No 255
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.61 E-value=0.00058 Score=70.63 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=69.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||..|+-+|..|++.|.+|+++++... +. .+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~---------l~----------~~d--------------------- 249 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL---------LR----------GFD--------------------- 249 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS---------ST----------TSC---------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc---------cc----------cCC---------------------
Confidence 34699999999999999999999999999997521 00 000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCC---eEEEEEEEeCCcc-EEEEEcCe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG---TIKGVQYKTKAGE-ELTAYAPL 214 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~---~v~~v~v~~~~G~-~~~i~a~~ 214 (506)
.++.+.+.+.+++. +++++.+. ++++...++ +...+++...+|+ +.++.+|.
T Consensus 250 ----------------------~~~~~~~~~~l~~~-GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 250 ----------------------QDMANKIGEHMEEH-GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESE
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCE
Confidence 01333455555555 78888874 777765321 2223555555663 35678999
Q ss_pred EEeecCCcccc
Q 010623 215 TIVCDGCFSNL 225 (506)
Q Consensus 215 vV~AdG~~S~v 225 (506)
||.|.|.....
T Consensus 307 vi~a~G~~p~~ 317 (519)
T 3qfa_A 307 VMLAIGRDACT 317 (519)
T ss_dssp EEECSCEEESC
T ss_pred EEEecCCcccC
Confidence 99999976543
No 256
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.61 E-value=0.00066 Score=71.59 Aligned_cols=101 Identities=18% Similarity=0.247 Sum_probs=68.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||.+|+-+|..|++.|.+|+++++.. .. + ++.+
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l---------~---------~~d~--------------------- 326 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL---------R---------GFDQ--------------------- 326 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS---------T---------TSCH---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc---------C---------cCCH---------------------
Confidence 479999999999999999999999999999862 10 0 0000
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee------C---CeEEEEEEEeCCccEEEE
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE------K---GTIKGVQYKTKAGEELTA 210 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~------~---~~v~~v~v~~~~G~~~~i 210 (506)
.+.+.+.+.+++. +++++.+. ++++... + +++. +.+...+|++.++
T Consensus 327 ----------------------~~~~~~~~~l~~~-gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~~~g~~~~~ 382 (598)
T 2x8g_A 327 ----------------------QMAEKVGDYMENH-GVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHYTDGKKFEE 382 (598)
T ss_dssp ----------------------HHHHHHHHHHHHT-TCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEETTSCEEEE
T ss_pred ----------------------HHHHHHHHHHHhC-CCEEEECCeEEEEEeccccccccCCCceEE-EEEEeCCCcEEec
Confidence 1222334444555 78888774 6776542 2 3332 4444567876667
Q ss_pred EcCeEEeecCCcccc
Q 010623 211 YAPLTIVCDGCFSNL 225 (506)
Q Consensus 211 ~a~~vV~AdG~~S~v 225 (506)
.+|.||.|.|.....
T Consensus 383 ~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 383 EFETVIFAVGREPQL 397 (598)
T ss_dssp EESEEEECSCEEECG
T ss_pred cCCEEEEEeCCcccc
Confidence 799999999977544
No 257
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.58 E-value=4.3e-05 Score=79.76 Aligned_cols=59 Identities=20% Similarity=0.336 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeC-CccE--EEE-EcCeEEeecCCccc
Q 010623 166 QRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEE--LTA-YAPLTIVCDGCFSN 224 (506)
Q Consensus 166 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~-~G~~--~~i-~a~~vV~AdG~~S~ 224 (506)
..+.+.+.+.++++++.++ |+++..+++++++|++... +|+. .++ .++.||.|.|+...
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC
Confidence 3455666666689999885 9999988888999987653 4642 223 68999999999653
No 258
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.58 E-value=5.2e-05 Score=81.90 Aligned_cols=36 Identities=31% Similarity=0.502 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
...||+||||||+|+++|..|+++|++|+|+|+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999864
No 259
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.56 E-value=0.00043 Score=70.63 Aligned_cols=102 Identities=21% Similarity=0.293 Sum_probs=69.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+...... + .
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----~-------------d--------------------- 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL----E-------------D--------------------- 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS----C-------------C---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC----C-------------C---------------------
Confidence 4579999999999999999999999999999975321100 0 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEec-eEEEEEeeC-CeEEEEEEEeCCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~-~v~~~~~~~-~~v~~v~v~~~~G~~~~i~a~~vV~ 217 (506)
..+.+.+.+.+. +.++.+ +++++..++ +++. +++.+.+|+..++.+|.||.
T Consensus 214 ----------------------~~~~~~l~~~l~----v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G~~~~i~~D~vi~ 266 (466)
T 3l8k_A 214 ----------------------QDIVNTLLSILK----LNIKFNSPVTEVKKIKDDEYE-VIYSTKDGSKKSIFTNSVVL 266 (466)
T ss_dssp ----------------------HHHHHHHHHHHC----CCEECSCCEEEEEEEETTEEE-EEECCTTSCCEEEEESCEEE
T ss_pred ----------------------HHHHHHHHhcCE----EEEEECCEEEEEEEcCCCcEE-EEEEecCCceEEEEcCEEEE
Confidence 012223333332 667766 488888766 6433 33322267656688999999
Q ss_pred ecCCcccch
Q 010623 218 CDGCFSNLR 226 (506)
Q Consensus 218 AdG~~S~vR 226 (506)
|.|.....-
T Consensus 267 a~G~~p~~~ 275 (466)
T 3l8k_A 267 AAGRRPVIP 275 (466)
T ss_dssp CCCEEECCC
T ss_pred CcCCCcccc
Confidence 999876553
No 260
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.54 E-value=0.00025 Score=68.91 Aligned_cols=96 Identities=21% Similarity=0.275 Sum_probs=66.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|.+|+-+|..|++.|.+|+++++.+.... .+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--------------------~~-------------------- 194 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--------------------SK-------------------- 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--------------------CT--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--------------------cH--------------------
Confidence 45899999999999999999999999999998753100 00
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~ 217 (506)
.+.+. ..++. +++++.++ ++++..++ ++.++++.+ .+|+..++.+|.||.
T Consensus 195 -----------------------~~~~~---~~~~~-gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2a87_A 195 -----------------------IMLDR---ARNND-KIRFLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFV 246 (335)
T ss_dssp -----------------------THHHH---HHHCT-TEEEECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEE
T ss_pred -----------------------HHHHH---HhccC-CcEEEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEE
Confidence 01111 11233 89998875 88887654 334466654 356545688999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|.|...
T Consensus 247 a~G~~p 252 (335)
T 2a87_A 247 AIGHEP 252 (335)
T ss_dssp CSCEEE
T ss_pred ccCCcc
Confidence 999643
No 261
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.51 E-value=8e-05 Score=79.72 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..+||+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999864
No 262
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.50 E-value=7.8e-05 Score=79.59 Aligned_cols=38 Identities=32% Similarity=0.406 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
...||+|||||++||++|+.|++.|++|+|+|+.+...
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 45899999999999999999999999999999986543
No 263
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.50 E-value=0.0009 Score=65.68 Aligned_cols=105 Identities=17% Similarity=0.213 Sum_probs=67.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||.+|+-+|..|++.|.+|+++++.+.... +. ... ..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~--------~~-------~d~-----~~---------------- 210 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND--------PD-------ADP-----SV---------------- 210 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------C-----TT----------------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC--------CC-------CCC-----Cc----------------
Confidence 4799999999999999999999999999998753110 00 000 00
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
. -...+.+.+.+.+++.++++++.++ ++++..+++. +.+...+|++. ..+|.||.|+
T Consensus 211 ---~---------------~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~---~~v~~~~g~~~-~~~d~vi~a~ 268 (369)
T 3d1c_A 211 ---R---------------LSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQ---YHISFDSGQSV-HTPHEPILAT 268 (369)
T ss_dssp ---S---------------CCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTE---EEEEESSSCCE-EESSCCEECC
T ss_pred ---c---------------CCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCc---eEEEecCCeEe-ccCCceEEee
Confidence 0 0112334555555665239998884 8888766663 34456778643 3469999999
Q ss_pred CCcc
Q 010623 220 GCFS 223 (506)
Q Consensus 220 G~~S 223 (506)
|...
T Consensus 269 G~~~ 272 (369)
T 3d1c_A 269 GFDA 272 (369)
T ss_dssp CBCG
T ss_pred ccCC
Confidence 9754
No 264
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.49 E-value=9.1e-05 Score=80.66 Aligned_cols=38 Identities=32% Similarity=0.406 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
...+|+|||||++||++|+.|+++|++|+|+|+.+...
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 45799999999999999999999999999999986543
No 265
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.46 E-value=0.00052 Score=72.22 Aligned_cols=97 Identities=20% Similarity=0.270 Sum_probs=70.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||||.+|+-+|..|++.|.+|+++|+.+..... +
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~----------------------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----I----------------------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----S-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----C-----------------------------------
Confidence 357999999999999999999999999999987532110 0
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEee
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~A 218 (506)
...+.+.+.+.+++. +++++.++ |+++..+++. |+ ..+|+ ++.+|.||.|
T Consensus 227 ---------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~---v~--~~~g~--~i~~D~Vi~a 277 (588)
T 3ics_A 227 ---------------------DYEMAAYVHEHMKNH-DVELVFEDGVDALEENGAV---VR--LKSGS--VIQTDMLILA 277 (588)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEGGGTE---EE--ETTSC--EEECSEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHc-CCEEEECCeEEEEecCCCE---EE--ECCCC--EEEcCEEEEc
Confidence 012334555556665 78888874 9998766552 33 46776 4679999999
Q ss_pred cCCcccc
Q 010623 219 DGCFSNL 225 (506)
Q Consensus 219 dG~~S~v 225 (506)
.|.....
T Consensus 278 ~G~~p~~ 284 (588)
T 3ics_A 278 IGVQPES 284 (588)
T ss_dssp SCEEECC
T ss_pred cCCCCCh
Confidence 9987654
No 266
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.44 E-value=7.1e-05 Score=76.13 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-C------CCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAK-D------GRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~-~------G~~v~vvE~~~~ 94 (506)
.+||+||||||+|+++|..|++ . |++|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 4799999999999999999999 7 999999999864
No 267
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.42 E-value=4.4e-05 Score=79.40 Aligned_cols=49 Identities=24% Similarity=0.323 Sum_probs=38.8
Q ss_pred CCCEEEEece-EEEEEeeCC---eEEEEEEEeCCccEEEE---EcCeEEeecCCcc
Q 010623 175 LPNVRLEQGT-VTSLLEEKG---TIKGVQYKTKAGEELTA---YAPLTIVCDGCFS 223 (506)
Q Consensus 175 ~~~v~i~~~~-v~~~~~~~~---~v~~v~v~~~~G~~~~i---~a~~vV~AdG~~S 223 (506)
.++++++.++ |+++..+++ ++++|++.+.+|+..++ .++.||.|.|+..
T Consensus 206 ~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 206 SNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp TTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccC
Confidence 4589998885 999987753 78899987767876666 5789999999873
No 268
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.40 E-value=0.0013 Score=66.89 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHH--------------------HCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLA--------------------KDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La--------------------~~G~-~v~vvE~~~ 93 (506)
.-+|+|||||.+|+-+|..|+ +.|. +|+|++|++
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 458999999999999999999 6788 799999985
No 269
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.34 E-value=0.0007 Score=65.27 Aligned_cols=95 Identities=20% Similarity=0.144 Sum_probs=67.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCc
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 139 (506)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+.... ..+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-------------------~~~-------------------- 194 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-------------------HEH-------------------- 194 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-------------------CHH--------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-------------------cHH--------------------
Confidence 35799999999999999999999999999998753100 000
Q ss_pred eeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEe-CCccEEEEEcCeEEe
Q 010623 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (506)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~-~~G~~~~i~a~~vV~ 217 (506)
. .+.+.+. ++.++.++ +.++..+++ +.++++.+ .+|+..++.+|.||.
T Consensus 195 ------------------------~----~~~l~~~-gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~ 244 (332)
T 3lzw_A 195 ------------------------S----VENLHAS-KVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIV 244 (332)
T ss_dssp ------------------------H----HHHHHHS-SCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEE
T ss_pred ------------------------H----HHHHhcC-CeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEE
Confidence 0 0112333 78888874 888877655 44577665 455556788999999
Q ss_pred ecCCcc
Q 010623 218 CDGCFS 223 (506)
Q Consensus 218 AdG~~S 223 (506)
|.|...
T Consensus 245 a~G~~p 250 (332)
T 3lzw_A 245 NYGFVS 250 (332)
T ss_dssp CCCEEC
T ss_pred eeccCC
Confidence 999643
No 270
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.32 E-value=0.0011 Score=68.90 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45899999999999999999999999999999875
No 271
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.32 E-value=0.00014 Score=74.02 Aligned_cols=35 Identities=34% Similarity=0.476 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG--RRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~~ 94 (506)
.+||+||||||+|+.+|..|++.| ++|+|+|+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 479999999999999999999998 99999999864
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.32 E-value=0.00016 Score=80.92 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~~ 94 (506)
.+||+||||||+|+++|..|++.|+ +|+|+|+.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 5799999999999999999999999 7999999754
No 273
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.28 E-value=0.0016 Score=62.17 Aligned_cols=34 Identities=32% Similarity=0.406 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 3579999999999999999999999999999864
No 274
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.25 E-value=0.0013 Score=66.69 Aligned_cols=96 Identities=24% Similarity=0.340 Sum_probs=66.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||||..|+-+|..|++.|.+|+++|+.+......
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 489999999999999999999999999999975311100
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeec
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~Ad 219 (506)
....+.+.+.+.+++. ++++.++ +.++..++ ++..+ ..+|+ ++.+|.||.|.
T Consensus 188 -------------------~~~~~~~~l~~~l~~~--v~i~~~~~v~~i~~~~-~v~~v---~~~g~--~i~~D~Vv~a~ 240 (449)
T 3kd9_A 188 -------------------FDKEVTDILEEKLKKH--VNLRLQEITMKIEGEE-RVEKV---VTDAG--EYKAELVILAT 240 (449)
T ss_dssp -------------------SCHHHHHHHHHHHTTT--SEEEESCCEEEEECSS-SCCEE---EETTE--EEECSEEEECS
T ss_pred -------------------cCHHHHHHHHHHHHhC--cEEEeCCeEEEEeccC-cEEEE---EeCCC--EEECCEEEEee
Confidence 0012444555666554 7777775 88887554 33222 23454 46799999999
Q ss_pred CCccc
Q 010623 220 GCFSN 224 (506)
Q Consensus 220 G~~S~ 224 (506)
|....
T Consensus 241 G~~p~ 245 (449)
T 3kd9_A 241 GIKPN 245 (449)
T ss_dssp CEEEC
T ss_pred CCccC
Confidence 98754
No 275
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.25 E-value=0.0011 Score=67.17 Aligned_cols=59 Identities=15% Similarity=0.088 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcC-----CCEEEEece-EEEEEeeCCeEEEEEEEe--------------CCccEEEEEcCeEEeecCCcc
Q 010623 164 FVQRLREKAASL-----PNVRLEQGT-VTSLLEEKGTIKGVQYKT--------------KAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 164 l~~~L~~~~~~~-----~~v~i~~~~-v~~~~~~~~~v~~v~v~~--------------~~G~~~~i~a~~vV~AdG~~S 223 (506)
+.+.|.+.+.+. .++.+++++ ++++..+ +++.++++.. .+|+..++.||.||.|.|..+
T Consensus 248 ~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 248 NIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 345566656551 378898885 8888755 4444555542 246555788999999999654
No 276
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.22 E-value=0.00021 Score=73.71 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=44.5
Q ss_pred HHHHHHHcCCCEEEEece-EEEEEeeC-C-eEEEEEEEeCCc---cEEEEEcCeEEeecCCccc
Q 010623 167 RLREKAASLPNVRLEQGT-VTSLLEEK-G-TIKGVQYKTKAG---EELTAYAPLTIVCDGCFSN 224 (506)
Q Consensus 167 ~L~~~~~~~~~v~i~~~~-v~~~~~~~-~-~v~~v~v~~~~G---~~~~i~a~~vV~AdG~~S~ 224 (506)
.+.+.+.+.++++++.++ |+++..++ + ++++|++.+.+| +..+++|+.||.|.|+...
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 344555666789999885 99998874 3 788898876666 5567899999999999853
No 277
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.22 E-value=0.00025 Score=73.10 Aligned_cols=59 Identities=12% Similarity=0.091 Sum_probs=44.7
Q ss_pred HHHHHHHHcCCCEEEEece-EEEEEeeC-C-eEEEEEEEeCCc---cEEEEEcCeEEeecCCccc
Q 010623 166 QRLREKAASLPNVRLEQGT-VTSLLEEK-G-TIKGVQYKTKAG---EELTAYAPLTIVCDGCFSN 224 (506)
Q Consensus 166 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~-~v~~v~v~~~~G---~~~~i~a~~vV~AdG~~S~ 224 (506)
..+...+.+.++++++.++ |+++..++ + ++++|++...+| ++.+++|+.||.|.|+...
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 3444555566789999885 99998875 4 688898876566 3567899999999999843
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.18 E-value=0.0012 Score=66.56 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
-+|+|||||+.|+-+|..+++.|.+|+|+|+.+.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecc
Confidence 4799999999999999999999999999998753
No 279
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.15 E-value=0.00019 Score=76.09 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--------CcEEEEecCC-CC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG--------RRVHVIERDL-SE 95 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G--------~~v~vvE~~~-~~ 95 (506)
..+|+|||||++||++|+.|++.| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999999 9999999987 54
No 280
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.10 E-value=0.0018 Score=66.56 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=64.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhccc
Q 010623 61 ADVIVVGAGVAGAALANTLAKDG--------------RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDA 126 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G--------------~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~ 126 (506)
..++|||||++|+-+|..|++.+ .+|+|+|..+...+. +
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~-----~---------------------- 270 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM-----F---------------------- 270 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----S----------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----C----------------------
Confidence 46999999999999999987543 568888876531100 0
Q ss_pred ceecceEEEECCceeeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCc
Q 010623 127 QRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAG 205 (506)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G 205 (506)
...+.+.+.+.+++. ||+++.++ |++++.+ .+. +.....||
T Consensus 271 ----------------------------------~~~~~~~~~~~L~~~-GV~v~~~~~v~~v~~~--~~~-~~~~~~dg 312 (502)
T 4g6h_A 271 ----------------------------------EKKLSSYAQSHLENT-SIKVHLRTAVAKVEEK--QLL-AKTKHEDG 312 (502)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHT-TCEEETTEEEEEECSS--EEE-EEEECTTS
T ss_pred ----------------------------------CHHHHHHHHHHHHhc-ceeeecCceEEEEeCC--ceE-EEEEecCc
Confidence 112444555666666 89998885 8887533 222 34445666
Q ss_pred c--EEEEEcCeEEeecCCc
Q 010623 206 E--ELTAYAPLTIVCDGCF 222 (506)
Q Consensus 206 ~--~~~i~a~~vV~AdG~~ 222 (506)
+ ..++.||.||.|.|..
T Consensus 313 ~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 313 KITEETIPYGTLIWATGNK 331 (502)
T ss_dssp CEEEEEEECSEEEECCCEE
T ss_pred ccceeeeccCEEEEccCCc
Confidence 4 2468899999999954
No 281
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.00 E-value=0.0017 Score=67.37 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35799999999999999999999999999999874
No 282
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.98 E-value=0.0011 Score=69.48 Aligned_cols=41 Identities=29% Similarity=0.468 Sum_probs=36.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~ 97 (506)
++++|||+|||+|..|..+|..|++.|.+|+++||++....
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 45579999999999999999999999999999999975433
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.95 E-value=0.0015 Score=72.72 Aligned_cols=94 Identities=20% Similarity=0.220 Sum_probs=69.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccccchHHHHHHhCchhHHhhcccceecceEEEECCce
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 140 (506)
-+|+|||+|+.|+-+|..|++.|.+|+|+|+.+... + .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~---------~-------~-------------------------- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS---------A-------A-------------------------- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC---------H-------H--------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc---------h-------h--------------------------
Confidence 579999999999999999999999999999975321 0 0
Q ss_pred eeeecCCcCCCCCcccccccchHHHHHHHHHHHcCCCEEEEece-EEEEEee-CCeEEEEEEEe--C---CccEEEEEcC
Q 010623 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKT--K---AGEELTAYAP 213 (506)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~~v~v~~--~---~G~~~~i~a~ 213 (506)
.+.+++. ++.++.++ ++++..+ ++++.+|++.+ . +|+..++.+|
T Consensus 323 ----------------------------~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 323 ----------------------------AAQAVAD-GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp ----------------------------HHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS
T ss_pred ----------------------------HHHHHhC-CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC
Confidence 0122333 78888885 8888764 56666777765 2 3544578899
Q ss_pred eEEeecCCcccc
Q 010623 214 LTIVCDGCFSNL 225 (506)
Q Consensus 214 ~vV~AdG~~S~v 225 (506)
.||.|.|....+
T Consensus 374 ~Vv~a~G~~P~~ 385 (965)
T 2gag_A 374 VLAVAGGFNPVV 385 (965)
T ss_dssp EEEEECCEEECC
T ss_pred EEEECCCcCcCh
Confidence 999999976543
No 284
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.95 E-value=0.0012 Score=62.37 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 458999999999999999999999 999998764
No 285
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.91 E-value=0.012 Score=56.16 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 4799999999999999999999999999998753
No 286
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.83 E-value=0.0054 Score=68.69 Aligned_cols=33 Identities=33% Similarity=0.403 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
-+|+|||||.+|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999997 899999874
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.80 E-value=0.002 Score=65.29 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~~ 94 (506)
.-+|+|||||.+|+-+|..+.+.|. +|+++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 3579999999999999999999998 5999998753
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.76 E-value=0.0014 Score=68.13 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45899999999999999999999999999999874
No 289
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.72 E-value=0.0041 Score=62.89 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRR-VHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~-v~vvE~~~ 93 (506)
.-+|+|||||.+|+-+|..|++.|.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 35799999999999999999999999 99999975
No 290
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.54 E-value=0.0089 Score=60.72 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 35799999999999999999999999999998753
No 291
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.50 E-value=0.0023 Score=63.42 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=33.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+...
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 479999999999999999999999999999987543
No 292
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.33 E-value=0.005 Score=51.30 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+-+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999985
No 293
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.27 E-value=0.012 Score=62.65 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 166 QRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 166 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
..+.+.+++. +++++.++ ++++.. ++ +++. .+|+..++.+|.||.|.|...
T Consensus 577 ~~~~~~l~~~-GV~v~~~~~v~~i~~--~~---v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSR-GVKMIPGVSYQKIDD--DG---LHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHT-TCEEECSCEEEEEET--TE---EEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhc-CCEEEeCcEEEEEeC--Ce---EEEe-cCCeEEEEeCCEEEECCCccc
Confidence 3445555565 88998885 888763 32 4443 567656788999999999654
No 294
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.21 E-value=0.0047 Score=52.41 Aligned_cols=35 Identities=23% Similarity=0.474 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998753
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.90 E-value=0.011 Score=49.96 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+-.|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999974
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.86 E-value=0.0089 Score=49.35 Aligned_cols=33 Identities=30% Similarity=0.551 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|+|+|+|..|..+|..|++.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 297
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.85 E-value=0.019 Score=61.72 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=31.3
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVG--AGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVG--gG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 34899998 99999999999999999999999874
No 298
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.72 E-value=0.011 Score=49.00 Aligned_cols=33 Identities=27% Similarity=0.558 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.42 E-value=0.015 Score=46.23 Aligned_cols=33 Identities=36% Similarity=0.507 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-CcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDG-RRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G-~~v~vvE~~~ 93 (506)
..|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 57999999999999999999999 8999999874
No 300
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.37 E-value=0.099 Score=52.42 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=32.3
Q ss_pred HHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCcc---EEEEEcCeEEeecCCc
Q 010623 167 RLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGE---ELTAYAPLTIVCDGCF 222 (506)
Q Consensus 167 ~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~---~~~i~a~~vV~AdG~~ 222 (506)
.+.+.+++. +++++.++ +++++. +++. +...+.+|+ ..++.+|++|.|.|..
T Consensus 213 ~~~~~l~~~-gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 213 ILTKGLKEE-GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHT-TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHC-CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcCCCc
Confidence 444555555 88888875 888753 3322 222234543 3468899999998843
No 301
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.33 E-value=0.052 Score=54.38 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 166 QRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 166 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
+.+.+.+++. +++++.++ |++++.+ ++++.+.+++..++.+|.||.|.|...
T Consensus 204 ~~l~~~l~~~-GV~i~~~~~v~~v~~~-----~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 204 RLVEDLFAER-NIDWIANVAVKAIEPD-----KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHT-TCEEECSCEEEEECSS-----EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHC-CCEEEeCCEEEEEeCC-----eEEEEecCCCceEEeeeEEEECCCCcc
Confidence 4455556666 88888875 8888543 245555444445688999999998653
No 302
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.17 E-value=0.023 Score=54.92 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-+|+|||||.+|+-+|..|++.| +|+++++.+
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999999 799999874
No 303
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.03 E-value=0.026 Score=49.16 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKD-GRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~-G~~v~vvE~~~ 93 (506)
...|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999874
No 304
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.96 E-value=0.023 Score=47.00 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 305
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.94 E-value=0.057 Score=54.18 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..|.|||+|..|...|..|++.|++|+++|++++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999999854
No 306
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.86 E-value=0.047 Score=51.77 Aligned_cols=33 Identities=3% Similarity=0.038 Sum_probs=26.5
Q ss_pred CcEEEECCCH-HHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGV-AGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~-aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-+++|||||. +++.+|..+++.|.+|+++++.+
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 4688888885 56788888988999999997753
No 307
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.72 E-value=0.021 Score=51.37 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 308
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.30 E-value=0.048 Score=56.45 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||+|.+|+-.|..|++.|.+|++++|.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 35799999999999999999999999999999764
No 309
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.28 E-value=0.04 Score=52.87 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.+|.|||+|..|.+.|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 58999999999999999999999999999986
No 310
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.15 E-value=0.045 Score=52.42 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
+...|.|||+|..|.+.|..|++.|+ +|+++|+++
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 34689999999999999999999998 999999874
No 311
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.09 E-value=0.036 Score=52.83 Aligned_cols=33 Identities=33% Similarity=0.585 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|.|||+|..|..-|..++..|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 312
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.07 E-value=0.054 Score=50.88 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 313
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.03 E-value=0.054 Score=53.20 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|+|+|++|+.+|..|...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999985
No 314
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.97 E-value=0.059 Score=51.12 Aligned_cols=32 Identities=31% Similarity=0.578 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.|.|||+|..|...|..|++.|++|+++|+++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999874
No 315
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.81 E-value=0.048 Score=52.05 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.+|.|||+|-.|.+.|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 57999999999999999999999999999986
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.75 E-value=0.06 Score=48.43 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.-.|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999875
No 317
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.72 E-value=0.042 Score=55.23 Aligned_cols=35 Identities=17% Similarity=0.469 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~ 95 (506)
..|+|||.|++|+++|..|+++|++|++.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 47999999999999999999999999999987643
No 318
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.46 E-value=0.027 Score=56.91 Aligned_cols=35 Identities=26% Similarity=0.596 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.++|+|+|+|-.|..+|..|.+.|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 47899999999999999999999999999999853
No 319
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.44 E-value=0.075 Score=49.86 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+|.|||+|..|...|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998753
No 320
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.43 E-value=0.071 Score=51.29 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.+|.|||||-.|.++|..|++.|+ +|+++|+++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999874
No 321
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.41 E-value=0.058 Score=54.43 Aligned_cols=33 Identities=36% Similarity=0.390 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|.|||.|.+|+++|..|+++|++|++.|+++
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 579999999999999999999999999999875
No 322
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.39 E-value=0.067 Score=54.28 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+++|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5799999999999999999999999999999874
No 323
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.38 E-value=0.041 Score=51.12 Aligned_cols=34 Identities=24% Similarity=0.513 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|||||.+|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3689999999999999999999999999999763
No 324
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.37 E-value=0.058 Score=51.07 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+..+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 356899999999999999999999999999999864
No 325
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.36 E-value=0.086 Score=47.00 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
...|.|||+|-.|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46799999999999999999999999999998753
No 326
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.33 E-value=0.089 Score=50.37 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..+|.|||||-.|..+|..|+..|+ +|+++|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999998 999999874
No 327
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.30 E-value=0.069 Score=53.07 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+.+|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999863
No 328
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.25 E-value=0.063 Score=50.75 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|-.|.+.|..|++.|.+|++++|++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999974
No 329
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.23 E-value=0.075 Score=53.49 Aligned_cols=33 Identities=36% Similarity=0.513 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 330
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.22 E-value=0.065 Score=52.21 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999884
No 331
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=93.22 E-value=0.16 Score=51.97 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~~ 94 (506)
-+|+|||+|-+|.-.+..|+++ +.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 3699999999999999999875 679999998753
No 332
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.21 E-value=0.092 Score=50.44 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..|.|||||..|.++|..|++.|+ +|+++|.++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999874
No 333
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.17 E-value=0.079 Score=51.51 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999999863
No 334
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.16 E-value=0.082 Score=50.54 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
.+|+|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999999 999999873
No 335
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.11 E-value=0.27 Score=48.67 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 166 QRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 166 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
+.+.+.+++. +++++.++ |++++.+ +| ..++|++ +.+|.||.|.|...
T Consensus 222 ~~~~~~l~~~-gV~~~~~~~v~~i~~~-----~v--~~~~g~~--~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 222 KAVASIYNQL-GIKLVHNFKIKEIREH-----EI--VDEKGNT--IPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHH-TCEEECSCCEEEECSS-----EE--EETTSCE--EECSEEEEECCEEC
T ss_pred HHHHHHHHHC-CCEEEcCCceEEECCC-----eE--EECCCCE--EeeeEEEECCCCCc
Confidence 3444445554 78888875 8888543 23 3567764 67999999999643
No 336
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.09 E-value=0.092 Score=50.63 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.+|.|||+|-.|.+.|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999974
No 337
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.06 E-value=0.089 Score=52.75 Aligned_cols=35 Identities=17% Similarity=0.412 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+.++.|||.|-.|+.+|..|++.|++|+++++++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999999999999999999999999999864
No 338
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.03 E-value=0.072 Score=49.01 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.+|+|||+|..|..+|..|++.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999998 899999874
No 339
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.77 E-value=0.096 Score=49.75 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999863
No 340
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.75 E-value=0.097 Score=50.03 Aligned_cols=33 Identities=33% Similarity=0.585 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.66 E-value=0.11 Score=49.43 Aligned_cols=33 Identities=36% Similarity=0.572 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999875
No 342
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.61 E-value=0.13 Score=51.96 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 46899999999999999999999999999999864
No 343
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.40 E-value=0.12 Score=52.34 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHC-CC-cEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD-GR-RVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~-G~-~v~vvE~~~~ 94 (506)
.+|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5899999999999999999999 99 9999999865
No 344
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.37 E-value=0.12 Score=50.22 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=32.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
|....+|.|||.|..|...|..|++.|++|+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4445789999999999999999999999999999874
No 345
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.36 E-value=0.12 Score=50.48 Aligned_cols=33 Identities=24% Similarity=0.531 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999873
No 346
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.31 E-value=0.13 Score=49.37 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHH-HHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAA-LANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~-~A~~La~~G~~v~vvE~~~~ 94 (506)
.+|.|||.|.+|++ +|..|.++|++|.+.|+.+.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 47999999999996 89999999999999999753
No 347
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.27 E-value=0.14 Score=50.39 Aligned_cols=34 Identities=32% Similarity=0.369 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999874
No 348
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.27 E-value=0.12 Score=51.06 Aligned_cols=34 Identities=35% Similarity=0.452 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3689999999999999999999999999999874
No 349
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.24 E-value=0.051 Score=45.20 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|+|||+|..|...|..|++.|++|+++++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999999874
No 350
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.22 E-value=0.12 Score=49.03 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+.+|+|||+|-.|.+.|..|+ .|.+|+++.|++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999999873
No 351
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.20 E-value=0.12 Score=51.44 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||+|..|+.+|..|++ |++|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4689999999999999999998 99999999875
No 352
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.19 E-value=0.13 Score=49.51 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
++.+|.|||+|..|.+.|..|++.|++|++++|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 46889999999999999999999999999999863
No 353
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.11 E-value=0.15 Score=49.51 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||+|-.|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999874
No 354
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.94 E-value=0.18 Score=51.34 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 46899999999999999999999999999999864
No 355
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.94 E-value=0.15 Score=48.47 Aligned_cols=32 Identities=34% Similarity=0.519 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
+|.|||+|..|.++|..|+..|+ +|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 68999999999999999999999 999999873
No 356
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.88 E-value=0.17 Score=50.44 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|.|||.|-+||.+|..|++.|++|+.+|-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999874
No 357
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.75 E-value=0.15 Score=49.61 Aligned_cols=33 Identities=27% Similarity=0.580 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~ 92 (506)
+.+|+|+|||.+|..+|..|...|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4799999999999999999999999 99999987
No 358
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.75 E-value=0.14 Score=47.97 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 469999999999999999999999999999875
No 359
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.67 E-value=0.18 Score=47.95 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.+|.|||+|-.|..+|..|+..|+ +|+++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 360
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.61 E-value=0.19 Score=45.99 Aligned_cols=34 Identities=32% Similarity=0.523 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4789999999999999999999999999999875
No 361
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.41 E-value=0.19 Score=47.83 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHC--CCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKD--GRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~ 93 (506)
+|.|||+|-.|.++|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999985 78999999974
No 362
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.38 E-value=0.14 Score=51.32 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|.|||+|-.|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 363
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.37 E-value=0.17 Score=48.26 Aligned_cols=32 Identities=31% Similarity=0.529 Sum_probs=29.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
..+|.|||+|-.|.+.|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 468999999999999999999999999999 65
No 364
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.35 E-value=0.21 Score=47.54 Aligned_cols=32 Identities=34% Similarity=0.437 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~ 92 (506)
.+|.|||+|..|.++|..|++.|+ +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 579999999999999999999999 99999987
No 365
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.33 E-value=0.18 Score=49.34 Aligned_cols=33 Identities=24% Similarity=0.480 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999873
No 366
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.33 E-value=0.19 Score=47.61 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 367
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.31 E-value=0.14 Score=47.95 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4799999999999999999999998 899999874
No 368
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.31 E-value=0.23 Score=47.21 Aligned_cols=34 Identities=29% Similarity=0.491 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||+|..|...|..|++.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999874
No 369
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.27 E-value=0.2 Score=50.54 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999874
No 370
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.21 E-value=0.19 Score=47.24 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 468999999999999999999 999999999874
No 371
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.15 E-value=0.23 Score=47.43 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..+|.|||+|..|.++|..|+..|+ +++++|.++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3689999999999999999999999 999999875
No 372
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.14 E-value=0.22 Score=47.54 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
..+|.|||+|-+|.++|+.|+..|+ +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999874
No 373
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.14 E-value=0.21 Score=47.82 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4799999999999999999999998 789999875
No 374
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.10 E-value=0.25 Score=44.16 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|.|||+|-.|...|..|++.|++|++++|++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 375
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.99 E-value=0.24 Score=48.12 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~ 96 (506)
.|+|+|||..|..+|+.+++.|++|+++|.++...
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 59999999999999999999999999999886543
No 376
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.88 E-value=0.31 Score=46.17 Aligned_cols=34 Identities=38% Similarity=0.643 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999874
No 377
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.85 E-value=0.082 Score=47.98 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4579999999999999999999999 99999875
No 378
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.83 E-value=0.25 Score=45.78 Aligned_cols=34 Identities=35% Similarity=0.534 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|+|+|.+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 379
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.82 E-value=0.6 Score=48.40 Aligned_cols=35 Identities=11% Similarity=0.240 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
+-+|+|+|.|..|..+|..|.+.|++|+++|+++.
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~ 161 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYD 161 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHH
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999999853
No 380
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.76 E-value=0.15 Score=49.81 Aligned_cols=32 Identities=38% Similarity=0.488 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 381
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.74 E-value=0.22 Score=48.84 Aligned_cols=34 Identities=38% Similarity=0.561 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999873
No 382
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.73 E-value=0.23 Score=53.02 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=31.8
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVG--AGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVG--gG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
.-+|+||| ||.+|+-+|..|++.|.+|+++++.+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 34699999 999999999999999999999998864
No 383
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.68 E-value=0.22 Score=48.38 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~ 92 (506)
+.+|+|+|||-+|..+|..|...|. +|+++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4799999999999999999999999 89999987
No 384
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.66 E-value=0.19 Score=47.34 Aligned_cols=33 Identities=27% Similarity=0.476 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|..|...|..|++.|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 385
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.58 E-value=0.21 Score=47.12 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999874
No 386
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.49 E-value=0.25 Score=45.90 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
..|+|+|+|.+|.++|..|++.|.+|+++.|+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999887
No 387
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.49 E-value=0.22 Score=45.69 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3689999999999999999999998 889999874
No 388
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.48 E-value=0.19 Score=48.26 Aligned_cols=30 Identities=33% Similarity=0.547 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEec
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIER 91 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~ 91 (506)
+|.|||+|..|.+.|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 389
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.48 E-value=0.28 Score=49.97 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+..+|.|||.|..|..+|..|+++|++|++++|++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999875
No 390
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.46 E-value=0.22 Score=47.58 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG-RRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G-~~v~vvE~~~ 93 (506)
..+|.|||.|..|...|..|++.| ++|+++++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999985
No 391
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.44 E-value=0.24 Score=47.33 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999874
No 392
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.38 E-value=0.31 Score=46.46 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..|.|||+|..|.++|..|+..|+ +++++|.++
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 589999999999999999999998 999999875
No 393
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.31 E-value=0.21 Score=50.22 Aligned_cols=34 Identities=35% Similarity=0.420 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-.|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999998863
No 394
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.28 E-value=0.26 Score=47.16 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~ 92 (506)
...|.|||+|..|.++|..|+..|+ +++++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3689999999999999999999997 89999986
No 395
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.21 E-value=0.17 Score=47.45 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|.|||.|..|...|..|++.|++|+++++++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999875
No 396
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.18 E-value=0.2 Score=50.61 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~ 93 (506)
.+|.|||.|-.|+.+|..|++. |++|+++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999999 89999999874
No 397
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.10 E-value=0.27 Score=49.86 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 398
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.02 E-value=0.28 Score=44.25 Aligned_cols=34 Identities=29% Similarity=0.402 Sum_probs=31.4
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 467999998 9999999999999999999999874
No 399
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.99 E-value=0.3 Score=50.71 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=41.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCcccccccc--cchHHHHHHhCch
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQ--PGGYLKLIELGLE 118 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~~~~~~g~~l~--~~~~~~l~~~g~~ 118 (506)
-+|+|||+|..|..+|..|.+.|++|+++|+++..-.... ..+. ....+.|++.|+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~i~gD~t~~~~L~~agi~ 407 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VVVYGDATVGQTLRQAGID 407 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CEEESCSSSSTHHHHHTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CEEEeCCCCHHHHHhcCcc
Confidence 7899999999999999999999999999999875433221 1111 1223566666664
No 400
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=89.96 E-value=1.6 Score=43.42 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCCCEEEEece-EEEEEeeCCeEEEEEEEeCCccEEEEEcCeEEeecCCcc
Q 010623 165 VQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (506)
Q Consensus 165 ~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~~v~v~~~~G~~~~i~a~~vV~AdG~~S 223 (506)
.+.+.+.++++ |++++.++ |++++. + .+.+.+.+|+..++.+|++|.|.|...
T Consensus 203 ~~~l~~~l~~~-GV~~~~~~~v~~v~~--~---~~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP--D---KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS--S---EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHhC-CeEEEeCceEEEEeC--C---ceEEEeeCCCceEeecceEEEeccCCC
Confidence 34455556666 88998885 888743 3 355667777777899999999999654
No 401
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.88 E-value=0.15 Score=45.71 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEE-EecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHV-IERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~v-vE~~~ 93 (506)
.+|.|||+|-.|.+.|..|++.|++|++ ++|++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5899999999999999999999999999 88764
No 402
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.87 E-value=0.31 Score=43.24 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=29.8
Q ss_pred cEEEEC-CCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVG-AGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVG-gG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|+|+| +|-.|...|..|++.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999873
No 403
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.82 E-value=0.33 Score=46.40 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDG----RRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G----~~v~vvE~~~ 93 (506)
..+|.|||+|-.|.+.|..|++.| ++|++++|++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 7999999874
No 404
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.76 E-value=0.64 Score=45.43 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~~ 95 (506)
...|+|+|+|..|..+|..+++.|++|++++..+..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~ 47 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDC 47 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 457999999999999999999999999999987543
No 405
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.73 E-value=0.22 Score=49.30 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 406
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.69 E-value=0.27 Score=49.52 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
..|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 57999999999999999999999999999975
No 407
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.66 E-value=0.44 Score=44.95 Aligned_cols=33 Identities=24% Similarity=0.521 Sum_probs=30.7
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVG-AGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVG-gG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.||| +|-.|.+.|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999874
No 408
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=89.62 E-value=0.29 Score=50.00 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.++|++|||+|++|+++|..|++.|.+|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999976
No 409
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.60 E-value=0.29 Score=46.16 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999998 999998873
No 410
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.57 E-value=0.27 Score=46.99 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
.|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999873
No 411
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.57 E-value=0.28 Score=47.47 Aligned_cols=34 Identities=29% Similarity=0.551 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5789999999999999999999998 899999874
No 412
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.56 E-value=0.33 Score=45.22 Aligned_cols=32 Identities=34% Similarity=0.528 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998863
No 413
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.52 E-value=0.28 Score=46.20 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
+|.|||+|..|.++|..|++.|+ +++++|+++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 68999999999999999999998 899999874
No 414
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.51 E-value=0.4 Score=45.75 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~ 92 (506)
...|.|||+|..|.++|+.|+..|+ +++++|.+
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 4689999999999999999999998 89999986
No 415
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.50 E-value=0.35 Score=44.47 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC----CcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDG----RRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G----~~v~vvE~~~~ 94 (506)
.+|.|||+|-.|.+.|..|++.| ++|.++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999999 79999999864
No 416
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.37 E-value=0.33 Score=49.22 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
++.+|.|||+|..|..+|..|++.|++|++++|++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999874
No 417
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.26 E-value=0.11 Score=46.81 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEec
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIER 91 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~ 91 (506)
..+|.|||.|..|.++|..|++.|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 36899999999999999999999999999987
No 418
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=89.21 E-value=0.4 Score=48.43 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||.|..|..+|..|+++|++|+++++++
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999985
No 419
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.14 E-value=0.24 Score=47.09 Aligned_cols=31 Identities=32% Similarity=0.398 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHC-----C-CcEEEEec
Q 010623 61 ADVIVVGAGVAGAALANTLAKD-----G-RRVHVIER 91 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~-----G-~~v~vvE~ 91 (506)
.+|.|||+|..|.+.|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 420
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.08 E-value=0.41 Score=45.55 Aligned_cols=33 Identities=24% Similarity=0.527 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
..|.|||.|..|.+.|..|++.|+ +|+++++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999874
No 421
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.07 E-value=0.31 Score=46.02 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 422
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.05 E-value=0.34 Score=46.15 Aligned_cols=35 Identities=26% Similarity=0.506 Sum_probs=31.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecC
Q 010623 58 PFDADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (506)
Q Consensus 58 ~~~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~ 92 (506)
+++..|.|||+|-+|.++|+.|+..++ .+.++|.+
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345789999999999999999999887 89999985
No 423
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.92 E-value=0.35 Score=45.94 Aligned_cols=32 Identities=31% Similarity=0.487 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
.|.|||+|..|.++|..|++.|+ +++++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 68999999999999999999997 899999875
No 424
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.89 E-value=0.29 Score=45.63 Aligned_cols=33 Identities=36% Similarity=0.500 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
-.|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999999 899999875
No 425
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.86 E-value=0.5 Score=43.36 Aligned_cols=32 Identities=38% Similarity=0.549 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.|+|+|+|-+|.+++..|.+.|. +|+|+.|.+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999999 999999874
No 426
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.86 E-value=0.41 Score=48.55 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|..|...|..|++.|++|++++|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 427
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.84 E-value=0.37 Score=45.25 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999874
No 428
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.77 E-value=0.5 Score=45.47 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||.|..|.+.|..|++.|++|+++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 429
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=88.75 E-value=0.39 Score=49.52 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4789999999999999999999998 899999875
No 430
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.71 E-value=0.33 Score=47.85 Aligned_cols=34 Identities=32% Similarity=0.369 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-.|+|+|.|..|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999999874
No 431
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.64 E-value=0.36 Score=45.66 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
..|.|||||..|...|+.|+..|+ +++|+|.++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 589999999999999999999998 999999875
No 432
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.61 E-value=0.31 Score=45.37 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|+|+|+|.+|.++|..|++.|.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999999873
No 433
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.59 E-value=0.4 Score=45.79 Aligned_cols=33 Identities=24% Similarity=0.474 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~ 92 (506)
...|.|||+|..|.++|..|+..|+ +++++|..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 3589999999999999999999988 89999985
No 434
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.55 E-value=0.36 Score=44.45 Aligned_cols=32 Identities=34% Similarity=0.540 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCC-CcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDG-RRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G-~~v~vvE~~~ 93 (506)
.|.|||+|-.|...|..|++.| ++|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999873
No 435
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=88.53 E-value=0.48 Score=46.36 Aligned_cols=36 Identities=31% Similarity=0.163 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
....++|+|||..|.++|..++..|++|+|+|.++.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 457999999999999999999999999999998764
No 436
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.48 E-value=0.57 Score=43.57 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..|+|.|+|-.|..++..|.+.|++|+++.|++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999999754
No 437
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.47 E-value=0.34 Score=49.05 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-.|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 438
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.46 E-value=0.55 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC---cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR---RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~---~v~vvE~~~ 93 (506)
..|.|||+|-.|.+.|..|.+.|+ +|+++++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999875
No 439
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.45 E-value=0.4 Score=45.66 Aligned_cols=33 Identities=24% Similarity=0.513 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~ 92 (506)
..+|.|||+|-+|.++|..|+..|+ .+.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999885 89999876
No 440
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.42 E-value=0.45 Score=45.17 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.|+|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999999 899998873
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.39 E-value=0.45 Score=44.77 Aligned_cols=33 Identities=36% Similarity=0.516 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|..+|..|+..|.+|+++++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 442
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.39 E-value=0.55 Score=42.83 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC----cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR----RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~----~v~vvE~~~ 93 (506)
.+|.|||+|-.|.+.|..|.+.|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 443
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.31 E-value=0.32 Score=47.58 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-------CcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDG-------RRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G-------~~v~vvE~~~~ 94 (506)
.+|.|||+|-.|.+.|..|++.| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998754
No 444
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.28 E-value=0.51 Score=41.79 Aligned_cols=32 Identities=28% Similarity=0.504 Sum_probs=29.8
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999974
No 445
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.26 E-value=0.24 Score=47.92 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-------CcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDG-------RRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G-------~~v~vvE~~~~ 94 (506)
.+|.|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998754
No 446
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.22 E-value=0.56 Score=44.83 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~ 92 (506)
...|.|||+|..|.++|+.|+..|+ +++++|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4689999999999999999999998 89999986
No 447
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.22 E-value=0.37 Score=45.73 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G--~~v~vvE~~~ 93 (506)
.|.|||+|-.|.++|..|++.| .+|+++|+++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6999999873
No 448
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.20 E-value=0.47 Score=45.19 Aligned_cols=34 Identities=32% Similarity=0.557 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
...|.|||+|..|.++|+.|+..|. +++++|.++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3689999999999999999998886 899999873
No 449
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.20 E-value=0.38 Score=44.75 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|+|.|||..|..++..|.++|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999874
No 450
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.19 E-value=0.64 Score=42.79 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=30.0
Q ss_pred CCcEEEECC-C-HHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGA-G-VAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGg-G-~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-.|+|.|| | -.|..+|..|+++|.+|++++|+.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 346999999 7 599999999999999999999874
No 451
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.18 E-value=0.38 Score=45.76 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.+|.|||.|..|...|..|++.|+ +|+++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 589999999999999999999999 999999873
No 452
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.17 E-value=0.44 Score=44.39 Aligned_cols=32 Identities=25% Similarity=0.545 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~--~v~vvE~~~ 93 (506)
.|.|||+|..|.+.|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998863
No 453
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=88.12 E-value=0.4 Score=49.02 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.++|++|||+|++|+.+|..|++.|.+|+|+|+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46999999999999999999999999999999975
No 454
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.11 E-value=0.48 Score=48.00 Aligned_cols=33 Identities=48% Similarity=0.633 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.+|.|||+|..|...|..|+++|++|++++|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 455
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.06 E-value=0.54 Score=44.34 Aligned_cols=33 Identities=36% Similarity=0.478 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|..+|..|...|.+|+++++.+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 456
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.03 E-value=0.43 Score=49.10 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4789999999999999999999998 899999874
No 457
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.01 E-value=0.28 Score=48.57 Aligned_cols=31 Identities=32% Similarity=0.449 Sum_probs=28.4
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCcEEEEec
Q 010623 61 ADVIVVGAGVAGAALANTLAK-DGRRVHVIER 91 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~-~G~~v~vvE~ 91 (506)
.+|.|||+|..|.+.|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 479999999999999999998 5999999983
No 458
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.00 E-value=0.41 Score=51.20 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999985
No 459
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.92 E-value=0.35 Score=49.03 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~--G~~v~vvE~~~ 93 (506)
.+|.|||.|-.|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999874
No 460
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.85 E-value=0.57 Score=43.79 Aligned_cols=34 Identities=35% Similarity=0.496 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3579999999999999999999999 699998873
No 461
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.84 E-value=0.41 Score=44.67 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.|.|||+|..|...|..|++ |++|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999874
No 462
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.84 E-value=0.56 Score=44.96 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=31.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 60 DADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 60 ~~dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
...|+|.|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 467999999 99999999999999999999999864
No 463
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.81 E-value=0.41 Score=44.58 Aligned_cols=33 Identities=33% Similarity=0.544 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|+|||+|.+|.+.|..|.+.|.+|++++|++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999998873
No 464
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.80 E-value=0.61 Score=44.86 Aligned_cols=33 Identities=33% Similarity=0.355 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|-.|.+.|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 479999999999999999999999999999874
No 465
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=87.59 E-value=0.49 Score=46.15 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=32.4
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC---cEEEEecCC
Q 010623 59 FDADVIVVGA-GVAGAALANTLAKDGR---RVHVIERDL 93 (506)
Q Consensus 59 ~~~dVvIVGg-G~aGl~~A~~La~~G~---~v~vvE~~~ 93 (506)
....|+|+|| |.+|+.++..+...|. +|+++|.++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 3589999999 9999999999999998 999999875
No 466
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.58 E-value=0.51 Score=44.09 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+ |-.|...|..|++.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999863
No 467
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.52 E-value=0.53 Score=45.44 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|+|+|+|+.|++++..++..|.+|+++++++
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998764
No 468
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.50 E-value=0.85 Score=44.72 Aligned_cols=34 Identities=18% Similarity=0.361 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
-.|+|+|+|..|..+|..+.+.|++|++++..+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 5899999999999999999999999999998754
No 469
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.45 E-value=0.42 Score=47.53 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
...-|||.|-.|+.+|..|++.|++|+++|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 467899999999999999999999999999985
No 470
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.39 E-value=0.39 Score=45.26 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
-+|-+||-|..|...|..|.+.|++|++++|++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999999864
No 471
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=87.37 E-value=0.62 Score=46.04 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 57 ~~~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
|+....|+|+|||..|..++..+.+.|++|++++ .+.
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~ 57 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADN 57 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCC
Confidence 4445789999999999999999999999999999 543
No 472
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.36 E-value=0.6 Score=41.48 Aligned_cols=32 Identities=34% Similarity=0.570 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999874
No 473
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=87.35 E-value=0.57 Score=46.63 Aligned_cols=34 Identities=41% Similarity=0.653 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 5799999999999999999999998 899999874
No 474
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.27 E-value=1.1 Score=47.67 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|.|||||..|...|..++..|++|+++|.++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 589999999999999999999999999999875
No 475
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.21 E-value=0.63 Score=47.05 Aligned_cols=34 Identities=32% Similarity=0.416 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
+.+|.|||+|..|...|..|++.|++|.+++|++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3689999999999999999999999999999874
No 476
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=87.17 E-value=0.49 Score=45.68 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
..+|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3699999999999999999999999 899999774
No 477
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.11 E-value=0.5 Score=44.07 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4589999999999999999999998 899998873
No 478
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=86.96 E-value=0.62 Score=44.13 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.|+|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3579999999999999999999998 799998873
No 479
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.92 E-value=0.65 Score=42.80 Aligned_cols=32 Identities=41% Similarity=0.509 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.|+|||+|-+|.+.|..|.+.|.+|++++|.+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998873
No 480
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.90 E-value=0.73 Score=40.17 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999999 99999999999999999999999753
No 481
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=86.67 E-value=0.73 Score=42.74 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999997 899998863
No 482
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=86.65 E-value=0.56 Score=45.82 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.|+|+|+|+.|+.++..++..|. +|+++++++
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDS 228 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 3579999999999999999999999 899998764
No 483
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.61 E-value=0.46 Score=44.50 Aligned_cols=31 Identities=35% Similarity=0.558 Sum_probs=28.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
-.|+|+|+|-+|.++|..|++.| +|+++.|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999876
No 484
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.59 E-value=0.51 Score=42.08 Aligned_cols=34 Identities=29% Similarity=0.519 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
..|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 47999996 99999999999999999999999854
No 485
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.56 E-value=0.8 Score=42.87 Aligned_cols=34 Identities=32% Similarity=0.530 Sum_probs=31.0
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 61 ~dVvIVGg-G~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
++|+|.|| |-.|..++..|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36999999 99999999999999999999998754
No 486
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.54 E-value=0.51 Score=44.70 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.3
Q ss_pred CCcEEEECCC-HHHHHHHHHHHHCCCcEEEEecC
Q 010623 60 DADVIVVGAG-VAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG-~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
.-+|+|||+| ++|..+|..|.+.|.+|++++|.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999 67999999999999999999886
No 487
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.47 E-value=0.59 Score=45.32 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|+|+|+|+.|+.++..++..|.+|+.+++++
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999999764
No 488
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.44 E-value=0.61 Score=42.99 Aligned_cols=33 Identities=33% Similarity=0.549 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCc-EEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRR-VHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~-v~vvE~~~ 93 (506)
..|.|||+|-.|...|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89998863
No 489
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.42 E-value=0.74 Score=42.93 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.-.|+|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 4579999999999999999999997 999998873
No 490
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.33 E-value=0.52 Score=46.59 Aligned_cols=33 Identities=42% Similarity=0.623 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~ 92 (506)
.-.|+|||+|..|..+|..|...|. +|++++|.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4579999999999999999999999 89999886
No 491
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.28 E-value=0.51 Score=50.39 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999885
No 492
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.83 E-value=0.67 Score=45.17 Aligned_cols=33 Identities=24% Similarity=0.146 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|+|+|+|+.|+.++..++..|.+|+++++++
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998763
No 493
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=85.78 E-value=0.4 Score=46.25 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Q 010623 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (506)
Q Consensus 59 ~~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~~ 94 (506)
....++|+|||..+.++|..++..|++|+|+|.++.
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~ 233 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPN 233 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcc
Confidence 357899999999999999999999999999998754
No 494
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.77 E-value=0.71 Score=43.71 Aligned_cols=32 Identities=31% Similarity=0.409 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEEecCC
Q 010623 62 DVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~~ 93 (506)
.|.|||||..|.++|+.|+..|+ .++++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999898 599999874
No 495
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.76 E-value=0.78 Score=42.88 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=29.9
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHCCCcEEEEecC
Q 010623 61 ADVIVVG-AGVAGAALANTLAKDGRRVHVIERD 92 (506)
Q Consensus 61 ~dVvIVG-gG~aGl~~A~~La~~G~~v~vvE~~ 92 (506)
-.|+|+| +|.+|.++|..|++.|.+|+++.|+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4799999 8999999999999999999999886
No 496
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.60 E-value=0.69 Score=42.89 Aligned_cols=32 Identities=28% Similarity=0.495 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~-~v~vvE~~ 92 (506)
..|+|+|+|-+|-++|..|++.|. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 579999999999999999999998 79999887
No 497
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=85.57 E-value=1.6 Score=43.11 Aligned_cols=33 Identities=12% Similarity=0.430 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---cEEEEecC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGR---RVHVIERD 92 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~---~v~vvE~~ 92 (506)
+..|+|.|||-+|..+|..|.+.|+ ++.++|+.
T Consensus 219 d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 219 ECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETT
T ss_pred hcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecc
Confidence 4799999999999999999999998 89999987
No 498
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.57 E-value=0.62 Score=42.86 Aligned_cols=30 Identities=27% Similarity=0.272 Sum_probs=27.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEec
Q 010623 62 DVIVVGAGVAGAALANTLAKDGRRVHVIER 91 (506)
Q Consensus 62 dVvIVGgG~aGl~~A~~La~~G~~v~vvE~ 91 (506)
.|.|||+|-.|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999765
No 499
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.56 E-value=0.71 Score=44.90 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 61 ~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
-.|+|+|+|+.|+.++..++..|.+|+++++++
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998763
No 500
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.51 E-value=0.65 Score=45.93 Aligned_cols=34 Identities=38% Similarity=0.465 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Q 010623 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (506)
Q Consensus 60 ~~dVvIVGgG~aGl~~A~~La~~G~~v~vvE~~~ 93 (506)
.-.|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4589999999999999999999999999999864
Done!