BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010624
(506 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 175/297 (58%), Gaps = 12/297 (4%)
Query: 22 YPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMS 81
+ ++ Y++ + IG G +A+V A C P V AIK I+L++ +T +D + +E + MS
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKV-AIKRINLEKCQTSMDELLKEIQAMS 68
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG------LPEPCIAIVLK 135
HPNI++ + SF V LW+VM +S GS+ II G L E IA +L+
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E L L YLH G +HRDVKAGNIL DGSV++ADFGVSA + + + +
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA--FLATGGDITRNKVRKTF 186
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP WMAPEV+ GY FKADIWSFGITA+ELA G P PP K L+ +T +
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM--LTLQNDP 244
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFF 312
E ++ K+ KK+ ++F+ M++ CL +DP KRP+A +L++H FF+ K EF
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA-KNKEFL 300
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 173/291 (59%), Gaps = 11/291 (3%)
Query: 20 IQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKT 79
+ + ++ Y++ + IG G +A+V A C P V AIK I+L++ +T +D + +E +
Sbjct: 3 LPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKV-AIKRINLEKCQTSMDELLKEIQA 61
Query: 80 MSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG------LPEPCIAIV 133
MS HPNI++ + SF V LW+VM +S GS+ II G L E IA +
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L+E L L YLH G +HRDVKAGNIL DGSV++ADFGVSA + + + +
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA--FLATGGDITRNKVRK 179
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
GTP WMAPEV+ GY FKADIWSFGITA+ELA G P PP K L+ +T +
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM--LTLQN 237
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
E ++ K+ KK+ ++F+ M++ CL +DP KRP+A +L++H FF+
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 160/294 (54%), Gaps = 24/294 (8%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
+DP + LD IG G VYK I VVAIK IDL+++ +++ I++E +S
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGID-NHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ 73
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
P I S+ ++LW++M ++ GS ++ P L E IA +L+E L L
Sbjct: 74 CDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLD 130
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH++ +HRD+KA N+L G VKLADFGV+ + + + GTP+WM
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-------FVGTPFWM 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEVI+ + Y FKADIWS GITA+ELA G PP S L P + L + + TL
Sbjct: 184 APEVIK-QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP------KNSPPTL 236
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVKNV 316
+ + S+ FK+ V +CL++DP RP+A++L+KH F K F + +
Sbjct: 237 E-----GQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELI 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 161/286 (56%), Gaps = 25/286 (8%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
LDP + L++IG G V+K I VVAIK IDL+++ +++ I++E +S
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
P + + S+ D++LW++M ++ GS ++ P L E IA +L+E L L
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLD 118
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH++ +HRD+KA N+L G VKLADFGV+ + + + GTP+WM
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN-------TFVGTPFWM 171
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEVI+ + Y KADIWS GITA+ELA G PP S L P K L + + TL
Sbjct: 172 APEVIK-QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP------KNNPPTL 224
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF-FKNCNK 307
+ +S+ K+ V +CL+++PS RP+A++L+KH F +N K
Sbjct: 225 E-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 265
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 160/286 (55%), Gaps = 25/286 (8%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
LDP + L++IG G V+K I VVAIK IDL+++ +++ I++E +S
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
P + + S+ D++LW++M ++ GS ++ P L E IA +L+E L L
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLD 118
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH++ +HRD+KA N+L G VKLADFGV+ + + + GTP+WM
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-------FVGTPFWM 171
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEVI+ + Y KADIWS GITA+ELA G PP S L P K L + TL
Sbjct: 172 APEVIK-QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN------PPTL 224
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF-FKNCNK 307
+ +S+ K+ V +CL+++PS RP+A++L+KH F +N K
Sbjct: 225 E-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 265
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 160/286 (55%), Gaps = 25/286 (8%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
+DP + L++IG G V+K I VVAIK IDL+++ +++ I++E +S
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 81
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
P + + S+ D++LW++M ++ GS ++ P L E IA +L+E L L
Sbjct: 82 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLD 138
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH++ +HRD+KA N+L G VKLADFGV+ + + + GTP+WM
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN-------TFVGTPFWM 191
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEVI+ + Y KADIWS GITA+ELA G PP S L P K L + TL
Sbjct: 192 APEVIK-QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN------PPTL 244
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF-FKNCNK 307
+ +S+ K+ V +CL+++PS RP+A++L+KH F +N K
Sbjct: 245 E-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 285
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 156/277 (56%), Gaps = 24/277 (8%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNA 91
L++IG G V+K I VVAIK IDL+++ +++ I++E +S P +
Sbjct: 27 LEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 92 HCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLH 151
+ S+ D++LW++M ++ GS ++ P L E IA +L+E L L YLH++ +H
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIH 142
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHT 211
RD+KA N+L G VKLADFGV+ + + + GTP+WMAPEVI+ +
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-------FVGTPFWMAPEVIK-QS 194
Query: 212 GYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKF 271
Y KADIWS GITA+ELA G PP S L P K L + TL+ +
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN------PPTLE-----GNY 243
Query: 272 SRAFKDMVASCLDQDPSKRPSAEKLMKHSF-FKNCNK 307
S+ K+ V +CL+++PS RP+A++L+KH F +N K
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 280
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 168/308 (54%), Gaps = 30/308 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
+ +L+++G G VYKAI +VAIK + ++ +DL I +E M P++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIH-KETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHV 86
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + S+ ++ LW+VM + GS+ II L E IA +L+ TL L YLH
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIR-LRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+KAGNIL +++G KLADFGV+ + + A + GTP+WMAPEVI+
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTD-------XMAKRNXVIGTPFWMAPEVIQ 198
Query: 209 SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ---RFRFSDYEKTLKIK 265
GY+ ADIWS GITA+E+A G+PP + + P +++ M T FR
Sbjct: 199 -EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFR----------- 246
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVKNVLHGLRSVEE 325
K + +S F D V CL + P +R +A +L++H F ++ KGV +++++ V+
Sbjct: 247 -KPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA-KGVSIL-RDLINEAMDVKL 303
Query: 326 RFKESRNH 333
+ +ES+
Sbjct: 304 KRQESQQR 311
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 153/281 (54%), Gaps = 25/281 (8%)
Query: 25 DPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
DP Y ++IG G S VY A+ + V AI+ ++L Q + + I E M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEV-AIRQMNL-QQQPKKELIINEILVMREN 74
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS-SCFPDGLPEPCIAIVLKETLSALS 142
+PNI+N S+ V LWVVM +++ GSL +++ +C +G IA V +E L AL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECLQALE 130
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ +HRD+K+ NIL DGSVKL DFG A I P ++M GTPYWM
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR------SEMVGTPYWM 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ + Y K DIWS GI A+E+ G PP + P ++L + T T
Sbjct: 184 APEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN--------GTP 234
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++++ +K S F+D + CLD D KR SA++L++H F K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 152/281 (54%), Gaps = 25/281 (8%)
Query: 25 DPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
DP Y ++IG G S VY A+ + V AI+ ++L Q + + I E M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEV-AIRQMNL-QQQPKKELIINEILVMREN 74
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS-SCFPDGLPEPCIAIVLKETLSALS 142
+PNI+N S+ V LWVVM +++ GSL +++ +C +G IA V +E L AL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECLQALE 130
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ +HRD+K+ NIL DGSVKL DFG A I P + M GTPYWM
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR------STMVGTPYWM 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ + Y K DIWS GI A+E+ G PP + P ++L + T T
Sbjct: 184 APEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN--------GTP 234
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++++ +K S F+D + CLD D KR SA++L++H F K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 152/281 (54%), Gaps = 25/281 (8%)
Query: 25 DPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
DP Y ++IG G S VY A+ + V AI+ ++L Q + + I E M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEV-AIRQMNL-QQQPKKELIINEILVMREN 74
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS-SCFPDGLPEPCIAIVLKETLSALS 142
+PNI+N S+ V LWVVM +++ GSL +++ +C +G IA V +E L AL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECLQALE 130
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ +HRD+K+ NIL DGSVKL DFG A I P + M GTPYWM
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR------SXMVGTPYWM 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ + Y K DIWS GI A+E+ G PP + P ++L + T T
Sbjct: 184 APEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN--------GTP 234
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++++ +K S F+D + CL+ D KR SA++L++H F K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 152/281 (54%), Gaps = 25/281 (8%)
Query: 25 DPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
DP Y ++IG G S VY A+ + V AI+ ++L Q + + I E M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEV-AIRQMNL-QQQPKKELIINEILVMREN 75
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS-SCFPDGLPEPCIAIVLKETLSALS 142
+PNI+N S+ V LWVVM +++ GSL +++ +C +G IA V +E L AL
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECLQALE 131
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ +HRD+K+ NIL DGSVKL DFG A I P + M GTPYWM
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR------SXMVGTPYWM 184
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ + Y K DIWS GI A+E+ G PP + P ++L + T T
Sbjct: 185 APEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN--------GTP 235
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++++ +K S F+D + CL+ D KR SA++L++H F K
Sbjct: 236 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 154/277 (55%), Gaps = 24/277 (8%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNA 91
L+ IG G V+K I VVAIK IDL+++ +++ I++E +S +
Sbjct: 28 LERIGKGSFGEVFKGID-NRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 92 HCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLH 151
+ S+ S+LW++M ++ GS ++ + D E IA +LKE L L YLH++ +H
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD---EFQIATMLKEILKGLDYLHSEKKIH 143
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHT 211
RD+KA N+L G VKLADFGV+ + + + GTP+WMAPEVI+ +
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN-------TFVGTPFWMAPEVIQ-QS 195
Query: 212 GYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKF 271
Y KADIWS GITA+ELA G PP S + P + L F + D F
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-------FLIPKNNPPTLVGD----F 244
Query: 272 SRAFKDMVASCLDQDPSKRPSAEKLMKHSFF-KNCNK 307
+++FK+ + +CL++DPS RP+A++L+KH F KN K
Sbjct: 245 TKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKK 281
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 152/281 (54%), Gaps = 25/281 (8%)
Query: 25 DPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
DP Y ++IG G S VY A+ + V AI+ ++L Q + + I E M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEV-AIRQMNL-QQQPKKELIINEILVMREN 75
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS-SCFPDGLPEPCIAIVLKETLSALS 142
+PNI+N S+ V LWVVM +++ GSL +++ +C +G IA V +E L AL
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECLQALE 131
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ +HR++K+ NIL DGSVKL DFG A I P + M GTPYWM
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR------STMVGTPYWM 184
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ + Y K DIWS GI A+E+ G PP + P ++L + T T
Sbjct: 185 APEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN--------GTP 235
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++++ +K S F+D + CL+ D KR SA++L++H F K
Sbjct: 236 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 154/292 (52%), Gaps = 32/292 (10%)
Query: 25 DPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
DP+ +++++ +G G VYK + + AIK +D+ + + + I++E +
Sbjct: 21 DPAGIFELVELVGNGTYGQVYKGRHVKT-GQLAAIKVMDV--TGDEEEEIKQEINMLKKY 77
Query: 84 SH-PNILNAHCSF------SVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKE 136
SH NI + +F +D +LW+VM F GS+ +I + + L E IA + +E
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICRE 137
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
L LS+LH +HRD+K N+L + VKL DFGVSA +
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL-------DRTVGRRNTFI 190
Query: 197 GTPYWMAPEVI----RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GTPYWMAPEVI Y FK+D+WS GITA+E+A G PPL + P ++L +
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL----- 245
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+ + K+KK+S+ F+ + SCL ++ S+RP+ E+LMKH F ++
Sbjct: 246 -----IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 157/297 (52%), Gaps = 26/297 (8%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
LDP+ ++I+ E+G G VYKA ++ +A + +S +L+ E + ++
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKN--KETGALAAAKVIETKSEEELEDYIVEIEILAT 72
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
HP I+ ++ D +LW+++ F G++ +I+ GL EP I +V ++ L AL+
Sbjct: 73 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALN 131
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH++ +HRD+KAGN+L +G ++LADFGVSA + GTPYWM
Sbjct: 132 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD-------SFIGTPYWM 184
Query: 203 APEVIRSH----TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
APEV+ T Y +KADIWS GIT +E+A PP L P + LL + SD
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-----KIAKSDP 239
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC--NKGVEFFV 313
L K+S F+D + LD++P RPSA +L++H F + NK + V
Sbjct: 240 PTLL----TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELV 292
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 157/297 (52%), Gaps = 26/297 (8%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
LDP+ ++I+ E+G G VYKA + A K I+ +S +L+ E + ++
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKN-KETGALAAAKVIE-TKSEEELEDYIVEIEILAT 64
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
HP I+ ++ D +LW+++ F G++ +I+ GL EP I +V ++ L AL+
Sbjct: 65 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALN 123
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH++ +HRD+KAGN+L +G ++LADFGVSA + GTPYWM
Sbjct: 124 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD-------SFIGTPYWM 176
Query: 203 APEVIRSH----TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
APEV+ T Y +KADIWS GIT +E+A PP L P + LL + SD
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-----KIAKSDP 231
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC--NKGVEFFV 313
L K+S F+D + LD++P RPSA +L++H F + NK + V
Sbjct: 232 PTLL----TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELV 284
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 154/284 (54%), Gaps = 26/284 (9%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
L+P ++I+ E+G G VYKA S + A K ID +S +L+ E ++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQN-KETSVLAAAKVIDT-KSEEELEDYMVEIDILAS 90
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
HPNI+ +F ++ LW+++ F + G++ +++ L E I +V K+TL AL+
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALN 149
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH+ +HRD+KAGNIL DG +KLADFGVSA + + + I GTPYWM
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDSFI----GTPYWM 202
Query: 203 APEVIRSHTG----YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
APEV+ T Y +KAD+WS GIT +E+A PP L P + LL + +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL-------KIAKS 255
Query: 259 E-KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
E TL + ++S FKD + CL+++ R + +L++H F
Sbjct: 256 EPPTLA---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 154/284 (54%), Gaps = 26/284 (9%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
L+P ++I+ E+G G VYKA S + A K ID +S +L+ E ++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQN-KETSVLAAAKVIDT-KSEEELEDYMVEIDILAS 90
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
HPNI+ +F ++ LW+++ F + G++ +++ L E I +V K+TL AL+
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALN 149
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH+ +HRD+KAGNIL DG +KLADFGVSA + + + I GTPYWM
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFI----GTPYWM 202
Query: 203 APEVIRSHTG----YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
APEV+ T Y +KAD+WS GIT +E+A PP L P + LL + +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL-------KIAKS 255
Query: 259 E-KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
E TL + ++S FKD + CL+++ R + +L++H F
Sbjct: 256 EPPTLA---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 150/284 (52%), Gaps = 26/284 (9%)
Query: 24 LDPSS-YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
L+P ++I+ E+G G VYKA S + A K ID +S +L+ E ++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQN-KETSVLAAAKVIDT-KSEEELEDYMVEIDILAS 90
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
HPNI+ +F ++ LW+++ F + G++ +++ L E I +V K+TL AL+
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALN 149
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLH+ +HRD+KAGNIL DG +KLADFGVSA GTPYWM
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX-------FIGTPYWM 202
Query: 203 APEVIRSHTG----YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
APEV+ T Y +KAD+WS GIT +E+A PP L P + LL + +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL-------KIAKS 255
Query: 259 E-KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
E TL + ++S FKD + CL+++ R + +L++H F
Sbjct: 256 EPPTLA---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 155/293 (52%), Gaps = 35/293 (11%)
Query: 18 QKIQYPLDPSSYKI-LDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDL-DQSRTDLDS 72
Q + P DP Y +IG G + IV CI + VA+K +DL Q R +L
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGSTGIV----CIATEKHTGKQVAVKKMDLRKQQRREL-- 88
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ E M H N+++ + S+ V LWVVM F+ G+L I++ + E IA
Sbjct: 89 LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAT 145
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
V L ALSYLHNQG +HRD+K+ +IL SDG +KL+DFG A + +
Sbjct: 146 VCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR------- 198
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GTPYWMAPEVI S Y + DIWS GI +E+ G PP + PP +++ +R
Sbjct: 199 KXLVGTPYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-----RR 252
Query: 253 FRFSDYEKTLKIKDKNKKFS--RAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
R S ++KD +K S R F D++ L ++PS+R +A++L+ H F K
Sbjct: 253 IRDS---LPPRVKDLHKVSSVLRGFLDLM---LVREPSQRATAQELLGHPFLK 299
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 18 QKIQYPLDPSSYKILD---EIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSI 73
Q + P DP SY LD +IG G + IV A + +VA+K +DL Q R +L +
Sbjct: 64 QLVVDPGDPRSY--LDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRREL--L 118
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
E M H N++ + S+ V LWVVM F+ G+L I++ + E IA V
Sbjct: 119 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAV 175
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L ALS LH QG +HRD+K+ +IL DG VKL+DFG A + +
Sbjct: 176 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-------K 228
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
+ GTPYWMAPE+I S Y + DIWS GI +E+ G PP + PP K+ MKM +
Sbjct: 229 XLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR-- 283
Query: 254 RFSDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
L + KN K S + K + L +DP++R +A +L+KH F
Sbjct: 284 ------DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 18 QKIQYPLDPSSYKILD---EIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSI 73
Q + P DP SY LD +IG G + IV A + +VA+K +DL Q R +L +
Sbjct: 19 QLVVDPGDPRSY--LDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRREL--L 73
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
E M H N++ + S+ V LWVVM F+ G+L I++ + E IA V
Sbjct: 74 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAV 130
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L ALS LH QG +HRD+K+ +IL DG VKL+DFG A + +
Sbjct: 131 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 184
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
+ GTPYWMAPE+I S Y + DIWS GI +E+ G PP + PP K+ MKM +
Sbjct: 185 -LVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR-- 238
Query: 254 RFSDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
L + KN K S + K + L +DP++R +A +L+KH F
Sbjct: 239 ------DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 18 QKIQYPLDPSSYKILD---EIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSI 73
Q + P DP SY LD +IG G + IV A + +VA+K +DL Q R +L +
Sbjct: 21 QLVVDPGDPRSY--LDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRREL--L 75
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
E M H N++ + S+ V LWVVM F+ G+L I++ + E IA V
Sbjct: 76 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAV 132
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L ALS LH QG +HRD+K+ +IL DG VKL+DFG A + +
Sbjct: 133 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 186
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
+ GTPYWMAPE+I S Y + DIWS GI +E+ G PP + PP K+ MKM +
Sbjct: 187 -LVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR-- 240
Query: 254 RFSDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
L + KN K S + K + L +DP++R +A +L+KH F
Sbjct: 241 ------DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 135/254 (53%), Gaps = 23/254 (9%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
S + A K ID +S +L+ E ++ HPNI+ +F ++ LW+++ F + G+
Sbjct: 35 SVLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 93
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
+ +++ L E I +V K+TL AL+YLH+ +HRD+KAGNIL DG +KLADF
Sbjct: 94 VDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF 152
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTG----YSFKADIWSFGITALE 228
GVSA GTPYWMAPEV+ T Y +KAD+WS GIT +E
Sbjct: 153 GVSAKNTRTXIQRRDS------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 206
Query: 229 LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYE-KTLKIKDKNKKFSRAFKDMVASCLDQDP 287
+A PP L P + LL + + E TL + ++S FKD + CL+++
Sbjct: 207 MAEIEPPHHELNPMRVLL-------KIAKSEPPTLA---QPSRWSSNFKDFLKKCLEKNV 256
Query: 288 SKRPSAEKLMKHSF 301
R + +L++H F
Sbjct: 257 DARWTTSQLLQHPF 270
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 18 QKIQYPLDPSSYKILD---EIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSI 73
Q + P DP SY LD +IG G + IV A + +VA+K +DL Q R +L +
Sbjct: 10 QLVVDPGDPRSY--LDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRREL--L 64
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
E M H N++ + S+ V LWVVM F+ G+L I++ + E IA V
Sbjct: 65 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAV 121
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L ALS LH QG +HRD+K+ +IL DG VKL+DFG A + +
Sbjct: 122 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 175
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
+ GTPYWMAPE+I S Y + DIWS GI +E+ G PP + PP K+ MKM +
Sbjct: 176 -LVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR-- 229
Query: 254 RFSDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
L + KN K S + K + L +DP++R +A +L+KH F
Sbjct: 230 ------DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 18 QKIQYPLDPSSYKILD---EIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSI 73
Q + P DP SY LD +IG G + IV A + +VA+K +DL Q R +L +
Sbjct: 141 QLVVDPGDPRSY--LDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRREL--L 195
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
E M H N++ + S+ V LWVVM F+ G+L I++ + E IA V
Sbjct: 196 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAV 252
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L ALS LH QG +HRD+K+ +IL DG VKL+DFG A + +
Sbjct: 253 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 306
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
+ GTPYWMAPE+I S Y + DIWS GI +E+ G PP + PP K+ MKM +
Sbjct: 307 -LVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR-- 360
Query: 254 RFSDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
L + KN K S + K + L +DP++R +A +L+KH F
Sbjct: 361 ------DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 18 QKIQYPLDPSSYKILD---EIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSI 73
Q + P DP SY LD +IG G + IV A + +VA+K +DL Q R +L +
Sbjct: 14 QLVVDPGDPRSY--LDNFIKIGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRREL--L 68
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
E M H N++ + S+ V LWVVM F+ G+L I++ + E IA V
Sbjct: 69 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAV 125
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
L ALS LH QG +HRD+K+ +IL DG VKL+DFG A + +
Sbjct: 126 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-------K 178
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
+ GTPYWMAPE+I S Y + DIWS GI +E+ G PP + PP K+ MKM +
Sbjct: 179 XLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR-- 233
Query: 254 RFSDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
L + KN K S + K + L +DP++R +A +L+KH F
Sbjct: 234 ------DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 130/248 (52%), Gaps = 23/248 (9%)
Query: 56 VAIKAIDL-DQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQ 114
VA+K +DL Q R +L + E M H N++ + S+ V LWV+M F+ G+L
Sbjct: 73 VAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 115 SIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I+S L E IA V + L AL+YLH QG +HRD+K+ +IL DG VKL+DFG
Sbjct: 131 DIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGF 187
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A I + + GTPYWMAPEVI S + Y+ + DIWS GI +E+ G P
Sbjct: 188 CAQISKDVPKRKX-------LVGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P +++ +R R S K + K S +D + L +DP +R +A+
Sbjct: 240 PYFSDSPVQAM-----KRLRDSPPPKL----KNSHKVSPVLRDFLERMLVRDPQERATAQ 290
Query: 295 KLMKHSFF 302
+L+ H F
Sbjct: 291 ELLDHPFL 298
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 135/274 (49%), Gaps = 28/274 (10%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLD--QSRTDLDSIRRETKTMSLLSHPNIL 89
L EIG G VY A + +S VVAIK + QS I +E + + L HPN +
Sbjct: 20 LREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 78
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGH 149
+ + W+VM + C S + L E IA V L L+YLH+
Sbjct: 79 QYRGCYLREHTAWLVMEY--CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 150 LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
+HRDVKAGNIL G VKL DFG SASI P++ GTPYWMAPEVI +
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFG-SASIMAPAN----------XFVGTPYWMAPEVILA 185
Query: 210 --HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
Y K D+WS GIT +ELA +PPL ++ M+ + + E +
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNESPAL---Q 235
Query: 268 NKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ +S F++ V SCL + P RP++E L+KH F
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 135/274 (49%), Gaps = 28/274 (10%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLD--QSRTDLDSIRRETKTMSLLSHPNIL 89
L EIG G VY A + +S VVAIK + QS I +E + + L HPN +
Sbjct: 59 LREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 117
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGH 149
+ + W+VM + C S + L E IA V L L+YLH+
Sbjct: 118 QYRGCYLREHTAWLVMEY--CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 150 LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
+HRDVKAGNIL G VKL DFG SASI P++ GTPYWMAPEVI +
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANX----------FVGTPYWMAPEVILA 224
Query: 210 --HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
Y K D+WS GIT +ELA +PPL ++ M+ + + E +
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNESPAL---Q 274
Query: 268 NKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ +S F++ V SCL + P RP++E L+KH F
Sbjct: 275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 148/320 (46%), Gaps = 45/320 (14%)
Query: 29 YKILDEIGVGVSAIVYKAIC-IPMDSTVVAIKAIDLDQSRTDLDS-IRRETKTMSLLSHP 86
Y++L IG G ++ + V ++ I+L+ ++ + ++ E L +HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +F D+ LWVV FM+ GS + +I + F DG+ E IA +L+ L AL Y+H+
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY----WM 202
G++HR VKA +IL DG V L+ + S+ H ++ D W+
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS----HGQRQRVVHDFPKYSVKVLPWL 202
Query: 203 APEVIRSHT-GYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF-------- 253
+PEV++ + GY K+DI+S GITA ELA+G P +P + LL K+
Sbjct: 203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262
Query: 254 -----------------RFSDYEKTLKIKDKN---------KKFSRAFKDMVASCLDQDP 287
SD T + N + FS F V CL ++P
Sbjct: 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNP 322
Query: 288 SKRPSAEKLMKHSFFKNCNK 307
RPSA L+ HSFFK +
Sbjct: 323 DARPSASTLLNHSFFKQIKR 342
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 148/320 (46%), Gaps = 45/320 (14%)
Query: 29 YKILDEIGVGVSAIVYKAIC-IPMDSTVVAIKAIDLDQSRTDLDS-IRRETKTMSLLSHP 86
Y++L IG G ++ + V ++ I+L+ ++ + ++ E L +HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +F D+ LWVV FM+ GS + +I + F DG+ E IA +L+ L AL Y+H+
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY----WM 202
G++HR VKA +IL DG V L+ + S+ H ++ D W+
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS----HGQRQRVVHDFPKYSVKVLPWL 186
Query: 203 APEVIRSHT-GYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF-------- 253
+PEV++ + GY K+DI+S GITA ELA+G P +P + LL K+
Sbjct: 187 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 246
Query: 254 -----------------RFSDYEKTLKIKDKN---------KKFSRAFKDMVASCLDQDP 287
SD T + N + FS F V CL ++P
Sbjct: 247 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNP 306
Query: 288 SKRPSAEKLMKHSFFKNCNK 307
RPSA L+ HSFFK +
Sbjct: 307 DARPSASTLLNHSFFKQIKR 326
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 23/270 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI---DLDQSRTDLDSIRRETKTMSLL 83
++++I +IG G + VY+A C+ +D VA+K + DL ++ D I+ E + L
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQL 89
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKETLSAL 141
+HPN++ + SF D+ L +V+ G L +I +PE + + SAL
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
++H++ +HRD+K N+ + G VKL D G+ + H + GTPY+
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH-------SLVGTPYY 202
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
M+PE I + GY+FK+DIWS G E+A + P +K L + ++ DY
Sbjct: 203 MSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEQCDYPPL 258
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
+ +S + +V C++ DP KRP
Sbjct: 259 -----PSDHYSEELRQLVNMCINPDPEKRP 283
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 138/284 (48%), Gaps = 26/284 (9%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
L ++ + E+G G +V+K P V+A K I L+ + I RE + +
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ P I+ + +F D + + M M GSL ++ +PE + V + L+Y
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTY 138
Query: 144 LHNQGH-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
L + +HRDVK NIL +S G +KL DFGVS + + +M GT +M
Sbjct: 139 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYM 189
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY---E 259
+PE ++ T YS ++DIWS G++ +E+A GR P+ ++ F DY E
Sbjct: 190 SPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI-------FELLDYIVNE 241
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
K+ + FS F+D V CL ++P++R ++LM H+F K
Sbjct: 242 PPPKL--PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 24/276 (8%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 11 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + M + GT +M+PE +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------EMANEFVGTRSYMSPERL 178
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
+ T YS ++DIWS G++ +E+A GR P PP M + + + E K+
Sbjct: 179 QG-THYSVQSDIWSMGLSLVEMAVGRYP---RPP-----MAIFELLDYIVNEPPPKL--P 227
Query: 268 NKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ FS F+D V CL ++P++R ++LM H+F K
Sbjct: 228 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +M+PE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMSPERL 175
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPE-KSLLMKMTQRFRFSDY---EKTLK 263
+ T YS ++DIWS G++ +E+A GR P+ PP+ K F DY E K
Sbjct: 176 QG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKEDSRPPMAIFELLDYIVNEPPPK 232
Query: 264 IKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ + FS F+D V CL ++P++R ++LM H+F K
Sbjct: 233 L--PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 135/286 (47%), Gaps = 34/286 (11%)
Query: 30 KILDEIGVGVSAIVYKAICIPMDSTVVAIKAI-------DLDQSRTDLDSIRRETKTMSL 82
K L EIG G V K + P ++A+K I + Q DLD + R +
Sbjct: 25 KDLGEIGRGAYGSVNKMVHKP-SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC--- 80
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCG--SLQSIISSCFPDGLPEPCIAIVLKETLSA 140
P I+ + + + W+ M MS + S D +PE + + T+ A
Sbjct: 81 ---PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 141 LSYL-HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
L++L N +HRD+K NIL D G++KL DFG+S + + S T AG
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--------SIAKTRDAGCR 189
Query: 200 YWMAPEVI---RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
+MAPE I S GY ++D+WS GIT ELA GR P P S+ ++TQ +
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP---YPKWNSVFDQLTQVVKGD 246
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + + ++FS +F + V CL +D SKRP ++L+KH F
Sbjct: 247 PPQLS---NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 29 YKILDEIGVGVSAIVYKAI---------CIPMDSTVVAIKAIDLDQSRTDLDSIRRETKT 79
Y D IG GVS++V + + M+ T + L++ R ++ RRET
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR---EATRRETHI 152
Query: 80 MSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ ++ HP+I+ S+ S +++V M G L ++ L E +++ L
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLL 210
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
A+S+LH +HRD+K NIL D + ++L+DFG S + EP + ++ GT
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL-EPGEK-------LRELCGT 262
Query: 199 PYWMAPEVIR-----SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
P ++APE+++ +H GY + D+W+ G+ L G PP H L M M ++
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQY 322
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+FS E + S KD+++ L DP R +AE+ ++H FF+
Sbjct: 323 QFSSPEWDDR--------SSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+S L+ + + G+P P I L + L L++ H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 176
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 233 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 305 CNKGV 309
K V
Sbjct: 292 VTKPV 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+S L+ + + G+P P I L + L L++ H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 175
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 232 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 305 CNKGV 309
K V
Sbjct: 291 VTKPV 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+S L+ + + G+P P I L + L L++ H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 177
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 234 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 305 CNKGV 309
K V
Sbjct: 293 VTKPV 297
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+S L+ + + G+P P I L + L L++ H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 177
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 234 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 305 CNKGV 309
K V
Sbjct: 293 VTKPV 297
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 147/309 (47%), Gaps = 37/309 (11%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSL 82
+D +++ +++IG G +VYKA + VVA+K I LD + S RE +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
L+HPNI+ +++L++V F+ L+ + + G+P P I L + L L+
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+ H+ LHRD+K N+L +++G++KLADFG++ + P + H T ++
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYR 174
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR-------- 254
APE++ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEV 230
Query: 255 -------FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHS 300
DY+ + K + FS+ + +++ L DP+KR SA+ + H
Sbjct: 231 VWPGVTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 289
Query: 301 FFKNCNKGV 309
FF++ K V
Sbjct: 290 FFQDVTKPV 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 181
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 238 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 305 CNKGV 309
K V
Sbjct: 297 VTKPV 301
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L LS+ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L++ + + G+P P I L + L L++ H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH-QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 177
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 234 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 305 CNKGV 309
K V
Sbjct: 293 VTKPV 297
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 177
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 234 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 305 CNKGV 309
K V
Sbjct: 293 VTKPV 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 176
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 233 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 305 CNKGV 309
K V
Sbjct: 292 VTKPV 296
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 177
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 234 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 305 CNKGV 309
K V
Sbjct: 293 VTKPV 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 175
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 232 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 305 CNKGV 309
K V
Sbjct: 291 VTKPV 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 173
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 230 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 305 CNKGV 309
K V
Sbjct: 289 VTKPV 293
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 142/317 (44%), Gaps = 54/317 (17%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
L ++ + E+G G +V+K P V+A K I L+ + I RE + +
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ P I+ + +F D + + M M GSL ++ +PE + V + L+Y
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTY 146
Query: 144 LHNQGH-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
L + +HRDVK NIL +S G +KL DFGVS + + +M GT +M
Sbjct: 147 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYM 197
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL---------------- 246
+PE ++ T YS ++DIWS G++ +E+A GR P+ PP+ L
Sbjct: 198 SPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKELELMFGCQVEGDAAETP 254
Query: 247 ------------MKMTQR-----FRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQD 286
M R F DY E K+ + FS F+D V CL ++
Sbjct: 255 PRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKN 312
Query: 287 PSKRPSAEKLMKHSFFK 303
P++R ++LM H+F K
Sbjct: 313 PAERADLKQLMVHAFIK 329
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 178
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 235 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 305 CNKGV 309
K V
Sbjct: 294 VTKPV 298
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 173
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 230 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 305 CNKGV 309
K V
Sbjct: 289 VTKPV 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 181
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 238 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 305 CNKGV 309
K V
Sbjct: 297 VTKPV 301
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 176
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 233 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 305 CNKGV 309
K V
Sbjct: 292 VTKPV 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 175
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 232 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 305 CNKGV 309
K V
Sbjct: 291 VTKPV 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 175
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 232 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 305 CNKGV 309
K V
Sbjct: 291 VTKPV 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 173
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 230 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 305 CNKGV 309
K V
Sbjct: 289 VTKPV 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 176
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 233 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 305 CNKGV 309
K V
Sbjct: 292 VTKPV 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 173
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 230 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 305 CNKGV 309
K V
Sbjct: 289 VTKPV 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 175
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 232 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 305 CNKGV 309
K V
Sbjct: 291 VTKPV 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 54/312 (17%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 70 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +M+PE +
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMSPERL 237
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL--------------------- 246
+ T YS ++DIWS G++ +E+A GR P+ PP+ L
Sbjct: 238 QG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKELELMFGCQVEGDAAETPPRPRT 294
Query: 247 -------MKMTQR-----FRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
M R F DY E K+ + FS F+D V CL ++P++R
Sbjct: 295 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKL--PSAVFSLEFQDFVNKCLIKNPAERA 352
Query: 292 SAEKLMKHSFFK 303
++LM H+F K
Sbjct: 353 DLKQLMVHAFIK 364
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 140/312 (44%), Gaps = 54/312 (17%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +M+PE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMSPERL 175
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM------------------ 249
+ T YS ++DIWS G++ +E+A GR P+ PP+ L M
Sbjct: 176 QG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 250 ---------------TQRFRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
F DY E K+ + FS F+D V CL ++P++R
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERA 290
Query: 292 SAEKLMKHSFFK 303
++LM H+F K
Sbjct: 291 DLKQLMVHAFIK 302
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 54/312 (17%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +M+PE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMSPERL 175
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL--------------------- 246
+ T YS ++DIWS G++ +E+A GR P+ PP+ L
Sbjct: 176 QG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 247 -------MKMTQR-----FRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
M R F DY E K+ + FS F+D V CL ++P++R
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERA 290
Query: 292 SAEKLMKHSFFK 303
++LM H+F K
Sbjct: 291 DLKQLMVHAFIK 302
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 140/312 (44%), Gaps = 54/312 (17%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +M+PE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMSPERL 175
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM------------------ 249
+ T YS ++DIWS G++ +E+A GR P+ PP+ L M
Sbjct: 176 QG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 250 ---------------TQRFRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
F DY E K+ + FS F+D V CL ++P++R
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERA 290
Query: 292 SAEKLMKHSFFK 303
++LM H+F K
Sbjct: 291 DLKQLMVHAFIK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 140/312 (44%), Gaps = 54/312 (17%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V+K P V+A K I L+ + I RE + + + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V + L+YL +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +M+PE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMSPERL 175
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM------------------ 249
+ T YS ++DIWS G++ +E+A GR P+ PP+ L M
Sbjct: 176 QG-THYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 250 ---------------TQRFRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
F DY E K+ + FS F+D V CL ++P++R
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERA 290
Query: 292 SAEKLMKHSFFK 303
++LM H+F K
Sbjct: 291 DLKQLMVHAFIK 302
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 142/305 (46%), Gaps = 39/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ----SRTDLDSIRRET-KTMSL 82
+Y+ + +G GVS++V + I P A+K ID+ S ++ +R T K + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPT-CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 83 L----SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
L HPNI+ ++ ++ ++V M G L ++ L E +++ L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ LH +HRD+K NIL D D ++KL DFG S + +P + ++ GT
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEK-------LREVCGT 186
Query: 199 PYWMAPEVIR-----SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
P ++APE+I +H GY + D+WS G+ L G PP H L M M+ +
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFV 313
+F E +S KD+V+ L P KR +AE+ + H FF+ ++ V
Sbjct: 247 QFGSPEW--------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ------QYVV 292
Query: 314 KNVLH 318
+ V H
Sbjct: 293 EEVRH 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+ I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 305 CNKGV 309
K V
Sbjct: 290 VTKPV 294
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+ I LD + S RE + L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 173
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 230 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 305 CNKGV 309
K V
Sbjct: 289 VTKPV 293
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 33/284 (11%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ----SRTDLDSIRRET-KTMSLL----SH 85
+G GVS++V + I P A+K ID+ S ++ +R T K + +L H
Sbjct: 12 LGRGVSSVVRRCIHKPT-CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 70
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ ++ ++ ++V M G L ++ L E +++ L + LH
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALH 128
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+HRD+K NIL D D ++KL DFG S + +P + ++ GTP ++APE
Sbjct: 129 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEK-------LREVCGTPSYLAPE 180
Query: 206 VIR-----SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
+I +H GY + D+WS G+ L G PP H L M M+ ++F E
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 240
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+S KD+V+ L P KR +AE+ + H FF+
Sbjct: 241 --------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 143/300 (47%), Gaps = 37/300 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V F+ L+ + + G+P P I L + L L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 174
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 231 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 39/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ----SRTDLDSIRRET-KTMSL 82
+Y+ + +G GVS++V + I P A+K ID+ S ++ +R T K + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPT-CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 83 L----SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
L HPNI+ ++ ++ ++V M G L ++ L E +++ L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ LH +HRD+K NIL D D ++KL DFG S + +P + + GT
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEK-------LRSVCGT 186
Query: 199 PYWMAPEVIR-----SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
P ++APE+I +H GY + D+WS G+ L G PP H L M M+ +
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFV 313
+F E +S KD+V+ L P KR +AE+ + H FF+ ++ V
Sbjct: 247 QFGSPEW--------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ------QYVV 292
Query: 314 KNVLH 318
+ V H
Sbjct: 293 EEVRH 297
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 138/316 (43%), Gaps = 58/316 (18%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
++ + E+G G +V K P ++A K I L+ + I RE + + + P I
Sbjct: 18 FERISELGAGNGGVVTKVQHRP-SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ + +F D + + M M GSL ++ +PE + V L L+YL +
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 149 H-LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
+HRDVK NIL +S G +KL DFGVS + + +M GT +MAPE +
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANSFVGTRSYMAPERL 185
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR--------------- 252
+ T YS ++DIWS G++ +ELA GR P+ PP+ L + R
Sbjct: 186 QG-THYSVQSDIWSMGLSLVELAVGRYPIP--PPDAKELEAIFGRPVVDGEEGEPHSISP 242
Query: 253 ----------------------FRFSDY---EKTLKIKDKNKKFSRAFKDMVASCLDQDP 287
F DY E K+ N F+ F++ V CL ++P
Sbjct: 243 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL--PNGVFTPDFQEFVNKCLIKNP 300
Query: 288 SKRPSAEKLMKHSFFK 303
++R + L H+F K
Sbjct: 301 AERADLKMLTNHTFIK 316
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V + L++ + + G+P P I L + L L++ H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVH-QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRAPEI 173
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 230 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 305 CNKGV 309
K V
Sbjct: 289 VTKPV 293
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 37/305 (12%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHP 86
+++ +++IG G +VYKA + VVA+K I LD + S RE + L+HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI+ +++L++V + L+ + + G+P P I L + L L++ H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
LHRD+K N+L +++G++KLADFG++ + P + H T ++ APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRAPEI 177
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------ 254
+ YS DIWS G E+ R L P S + ++ + FR
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 255 ---FSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY+ + K + FS+ + +++ L DP+KR SA+ + H FF++
Sbjct: 234 VTSMPDYKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 305 CNKGV 309
K V
Sbjct: 293 VTKPV 297
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 24/254 (9%)
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSI 116
IK I+ D+S+ ++ I E + + L HPNI+ F +++VM G L
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 117 ISSCFPDG--LPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL---SDSDGSVKLAD 171
I S G L E +A ++K+ ++AL+Y H+Q +H+D+K NIL + +K+ D
Sbjct: 111 IVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID 170
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
FG+ A +++ H T+ AGT +MAPEV + +FK DIWS G+ L
Sbjct: 171 FGL-AELFKSDEHS-------TNAAGTALYMAPEVFKRDV--TFKCDIWSAGVVMYFLLT 220
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
G LP + L ++ Q+ + + ++ + + D++ L +DP +RP
Sbjct: 221 G-----CLPFTGTSLEEVQQKATYKEPNYAVEC----RPLTPQAVDLLKQMLTKDPERRP 271
Query: 292 SAEKLMKHSFFKNC 305
SA +++ H +FK
Sbjct: 272 SAAQVLHHEWFKQA 285
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G IVY + + +AIK I SR + E L H NI+ S
Sbjct: 30 LGKGTYGIVYAGRDLS-NQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGS 87
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCF-PDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
FS + + + M + GSL +++ S + P E I K+ L L YLH+ +HRD
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 154 VKAGNILSDS-DGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMAPEVI-RSH 210
+K N+L ++ G +K++DFG S + G T+ GT +MAPE+I +
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRL--------AGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 211 TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKK 270
GY ADIWS G T +E+A G+PP L ++ + F+ ++ +I +
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM------FKVGMFKVHPEIPESMSA 253
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++AF + C + DP KR A L+ F K +K
Sbjct: 254 EAKAF---ILKCFEPDPDKRACANDLLVDEFLKVSSK 287
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDS---TVVAIKAIDLDQS--RTDLDSIRRETKTMSLL 83
++IL IG G + +CI + + A+K ++ + R ++ ++ +E + M L
Sbjct: 17 FEILRAIGKGS----FGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
HP ++N SF + +++V+ + G L+ + E + + + E + AL Y
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDY 130
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
L NQ +HRD+K NIL D G V + DF ++A + + IT MAGT +MA
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--------ITTMAGTKPYMA 182
Query: 204 PEVI--RSHTGYSFKADIWSFGITALELAHGRPP 235
PE+ R GYSF D WS G+TA EL GR P
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 40/302 (13%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDS-TVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSH 85
Y+ + +IG G +V+K C D+ +VAIK + + I RE + + L H
Sbjct: 4 KYEKIGKIGEGSYGVVFK--CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PN++N F RL +V + L + + G+PE + + +TL A+++ H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+HRDVK NIL +KL DFG + + PS ++ D T ++ +PE
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY-------DDEVATRWYRSPE 172
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKS--------------LLMKMTQ 251
++ T Y D+W+ G EL G P L P KS L+ + Q
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVP----LWPGKSDVDQLYLIRKTLGDLIPRHQQ 228
Query: 252 RFRFSDYEKTLKIKD---------KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
F + Y +KI D K S ++ CL DP++R + E+L+ H +F
Sbjct: 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
Query: 303 KN 304
+N
Sbjct: 289 EN 290
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 23/273 (8%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G IVY + + +AIK I SR + E L H NI+ S
Sbjct: 16 LGKGTYGIVYAGRDLS-NQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGS 73
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCF-PDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
FS + + + M + GSL +++ S + P E I K+ L L YLH+ +HRD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 154 VKAGNILSDS-DGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMAPEVI-RSH 210
+K N+L ++ G +K++DFG S + G T+ GT +MAPE+I +
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRL--------AGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 211 TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKK 270
GY ADIWS G T +E+A G+PP L ++ + F+ ++ +I +
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM------FKVGMFKVHPEIPESMSA 239
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++AF + C + DP KR A L+ F K
Sbjct: 240 EAKAF---ILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST--VVAIKAIDLDQSRTDLDSIR-RETKTMSLLSH 85
Y+ L+++G G +VYKA DS +VA+K I LD + S RE + L H
Sbjct: 23 YQKLEKVGEGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI++ + L +V FM L+ ++ GL + I I L + L +++ H
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
LHRD+K N+L +SDG++KLADFG++ + P + H T ++ AP+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-------TLWYRAPD 189
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPL------SHLPPEKSLL------------- 246
V+ YS DIWS G E+ G+P LP S+L
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 247 MKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
+ + ++ F +EK F + D++++ L DP+KR SA M H +FK+ +
Sbjct: 250 LPLWKQRTFQVFEKK-PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 57 AIKAIDLDQ--SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
A+K I Q +TD +S+ RE + + L HPNI+ + F ++V + G L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLA 170
IIS E A ++++ LS ++Y+H +HRD+K N+L +S D ++++
Sbjct: 115 DEIISR---KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S H S + D GT Y++APEV+ H Y K D+WS G+ L
Sbjct: 172 DFGLST--------HFEASKKMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILL 221
Query: 231 HGRPPLSHLPPEKSLLMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP + E +L K+ + ++ F + KK S + KD++ L PS
Sbjct: 222 SGCPPFNG-ANEYDILKKVEKGKYTFE--------LPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 290 RPSAEKLMKHSFFKNCNK 307
R SA + H + + K
Sbjct: 273 RISARDALDHEWIQTYTK 290
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST--VVAIKAIDLDQSRTDLDSIR-RETKTMSLLSH 85
Y+ L+++G G +VYKA DS +VA+K I LD + S RE + L H
Sbjct: 23 YQKLEKVGEGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI++ + L +V FM L+ ++ GL + I I L + L +++ H
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
LHRD+K N+L +SDG++KLADFG++ + P + H T ++ AP+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-------TLWYRAPD 189
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPL------SHLPPEKSLL------------- 246
V+ YS DIWS G E+ G+P LP S+L
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 247 MKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
+ + ++ F +EK F + D++++ L DP+KR SA M H +FK+ +
Sbjct: 250 LPLWKQRTFQVFEKK-PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 57 AIKAIDLDQ--SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
A+K I Q +TD +S+ RE + + L HPNI+ + F ++V + G L
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 120
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLA 170
IIS E A ++++ LS ++Y+H +HRD+K N+L +S D ++++
Sbjct: 121 DEIISR---KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 177
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S H S + D GT Y++APEV+ H Y K D+WS G+ L
Sbjct: 178 DFGLST--------HFEASKKMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILL 227
Query: 231 HGRPPLSHLPPEKSLLMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP + E +L K+ + ++ F + KK S + KD++ L PS
Sbjct: 228 SGCPPFNG-ANEYDILKKVEKGKYTFE--------LPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 290 RPSAEKLMKHSFFKNCNK 307
R SA + H + + K
Sbjct: 279 RISARDALDHEWIQTYTK 296
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 57 AIKAIDLDQ--SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
A+K I Q +TD +S+ RE + + L HPNI+ + F ++V + G L
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 137
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLA 170
IIS E A ++++ LS ++Y+H +HRD+K N+L +S D ++++
Sbjct: 138 DEIISR---KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 194
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S H S + D GT Y++APEV+ H Y K D+WS G+ L
Sbjct: 195 DFGLST--------HFEASKKMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILL 244
Query: 231 HGRPPLSHLPPEKSLLMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP + E +L K+ + ++ F + KK S + KD++ L PS
Sbjct: 245 SGCPPFNG-ANEYDILKKVEKGKYTFE--------LPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 290 RPSAEKLMKHSFFKNCNK 307
R SA + H + + K
Sbjct: 296 RISARDALDHEWIQTYTK 313
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 57 AIKAIDLDQ--SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
A+K I Q +TD +S+ RE + + L HPNI+ + F ++V + G L
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLA 170
IIS E A ++++ LS ++Y+H +HRD+K N+L +S D ++++
Sbjct: 139 DEIISR---KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 195
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S H S + D GT Y++APEV+ H Y K D+WS G+ L
Sbjct: 196 DFGLST--------HFEASKKMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILL 245
Query: 231 HGRPPLSHLPPEKSLLMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP + E +L K+ + ++ F + KK S + KD++ L PS
Sbjct: 246 SGCPPFNG-ANEYDILKKVEKGKYTFE--------LPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 290 RPSAEKLMKHSFFKNCNK 307
R SA + H + + K
Sbjct: 297 RISARDALDHEWIQTYTK 314
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y++ + IG G A V K C + +VAIK +D + +DL I+ E + + L H +I
Sbjct: 12 YELHETIGTGGFAKV-KLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ +++++V+ + G L I S D L E +V ++ +SA++Y+H+QG
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+ HRD+K N+L D +KL DFG+ A +H + G+ + APE+I+
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH------LQTCCGSLAYAAPELIQ 182
Query: 209 SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKN 268
+ +AD+WS GI L G LP + +M + ++ Y D
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCG-----FLPFDDDNVMALYKKIMRGKY-------DVP 230
Query: 269 KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF-KNCNKGVEFFVKN 315
K S + ++ L DP KR S + L+ H + ++ N VE+ KN
Sbjct: 231 KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKN 278
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
TD+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 TDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 113
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 114 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 164
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
TD+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 165 TDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 224 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVL 134
E + LL HPNI+ + F ++VM G L II E A+++
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM---KFNEVDAAVII 142
Query: 135 KETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHHGSAM 191
K+ LS ++YLH +HRD+K N+L +S D +K+ DFG+SA ++E
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKK------- 194
Query: 192 ITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ 251
+ + GT Y++APEV+R Y K D+WS G+ L G PP ++ L
Sbjct: 195 MKERLGTAYYIAPEVLRKK--YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG 252
Query: 252 RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN-CNK--- 307
++ F E K S KD++ L D +R SA++ ++H + K C+K
Sbjct: 253 KYTFDSPEW--------KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKES 304
Query: 308 GVEF-FVKNVLHGLRSVE 324
G+E + N + +R +
Sbjct: 305 GIELPSLANAIENMRKFQ 322
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 117
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 168
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
TD+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 169 TDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 228 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
TD+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 TDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 27/279 (9%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSH--PNIL 89
L E+G G V+K + V+A+K + ++ + I + + L SH P I+
Sbjct: 30 LGEMGSGTCGQVWK-MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV-LKSHDCPYIV 87
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ-G 148
+F ++ +++ M M G+ + +PE + + + AL YL + G
Sbjct: 88 QCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG 145
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRDVK NIL D G +KL DFG+S + + AG +MAPE I
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--------AGCAAYMAPERID 197
Query: 209 ----SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKI 264
+ Y +AD+WS GI+ +ELA G+ P + + +L K+ Q + +
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ--------EEPPL 249
Query: 265 KDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ FS F+ V CL +D KRP KL++HSF K
Sbjct: 250 LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 37/300 (12%)
Query: 23 PLDPSSYKILDEIGVGVSAIVYKAICIPMDST--VVAIKAI--DLDQSRTDLDSIRRETK 78
PL + +L IG G A K + + + T + A+K + +L D+D ++ E
Sbjct: 5 PLGLQDFDLLRVIGRGSYA---KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 61
Query: 79 TMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKET 137
S HP ++ H F +SRL+ V+ +++ G L + LPE E
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEI 119
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
AL+YLH +G ++RD+K N+L DS+G +KL D+G+ P + G
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSXFCG 172
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL----SHLPPEKSLLMKMTQRF 253
TP ++APE++R Y F D W+ G+ E+ GR P S P+++ T+ +
Sbjct: 173 TPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----TEDY 226
Query: 254 RFS-DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE------KLMKHSFFKNCN 306
F EK ++I + S ++ S L++DP +R + H FF+N +
Sbjct: 227 LFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 283
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 72 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 129
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 130 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 180
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 181 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 239
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 240 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 32/297 (10%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDS-TVVAIKA-IDLDQSRTDLDSIRRETKTMSLLSH 85
Y+ L +G G +V K C D+ +VAIK ++ D + RE K + L H
Sbjct: 26 KYENLGLVGEGSYGMVMK--CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
N++N R ++V F+ L + FP+GL + L + ++ + + H
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+K NIL G VKL DFG + ++ P + D T ++ APE
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-------VYDDEVATRWYRAPE 194
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRP----------------PLSHLPPEKSLLMKM 249
++ Y D+W+ G E+ G P L +L P L
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254
Query: 250 TQRF---RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F R + ++ ++ + K S D+ CL DP KRP +L+ H FF+
Sbjct: 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 138
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 139 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 189
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
D+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 190 DDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 249 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 31/291 (10%)
Query: 14 GTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI---DLDQSRTDL 70
G + K Q+ L+ ++I +G G VY A ++A+K + L+++ +
Sbjct: 1 GAMGSKRQWALE--DFEIGRPLGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVE- 56
Query: 71 DSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCI 130
+RRE + S L HPNIL + F +R+++++ + G++ + E
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRT 114
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSA 190
A + E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSS 165
Query: 191 MITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMT 250
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 225 VEFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T++ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 TELCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 29/258 (11%)
Query: 57 AIKAIDLDQ--SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
A+K I Q +TD +S+ RE + + L HPNI + F ++V + G L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLA 170
IIS E A ++++ LS ++Y H +HRD+K N+L +S D ++++
Sbjct: 115 DEIISR---KRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S H S D GT Y++APEV+ H Y K D+WS G+ L
Sbjct: 172 DFGLST--------HFEASKKXKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILL 221
Query: 231 HGRPPLSHLPPEKSLLMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP + E +L K+ + ++ F + KK S + KD++ L PS
Sbjct: 222 SGCPPFNG-ANEYDILKKVEKGKYTFE--------LPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 290 RPSAEKLMKHSFFKNCNK 307
R SA + H + + K
Sbjct: 273 RISARDALDHEWIQTYTK 290
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 149/315 (47%), Gaps = 39/315 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-----SRTDLDSIRRETKTMSLL 83
Y+ + ++G G Y + + D A +AI + + + ++ ++ E + L
Sbjct: 6 YQRVKKLGSGA----YGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSL--QSIISSCFPDGLPEPCIAIVLKETLSAL 141
HPNI+ + F ++VM G L + I+ F E A+++K+ LS
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS----EVDAAVIMKQVLSGT 117
Query: 142 SYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+YLH +HRD+K N+L +S D +K+ DFG+SA H G M + GT
Sbjct: 118 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-------HFEVGGKM-KERLGT 169
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-D 257
Y++APEV+R Y K D+WS G+ L G PP ++ ++K ++ +FS D
Sbjct: 170 AYYIAPEVLRKK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQE--ILKRVEKGKFSFD 225
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF-KNCNKGVEFFVKNV 316
++ D+ K+ +V L +PSKR SAE+ + H + K C++ K+
Sbjct: 226 PPDWTQVSDEAKQ-------LVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHA 278
Query: 317 LHGLRSVEERFKESR 331
L G ++F+ S+
Sbjct: 279 LTGALGNMKKFQSSQ 293
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 138
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 139 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 189
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 190 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 249 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 113
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 114 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSC---------HAPSSRR 164
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T ++GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 165 TTLSGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 224 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 117
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 168
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE I + K D+WS G+ E G+PP +++
Sbjct: 169 TTLCGTLDYLPPEXIEGRX-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 228 FTFPDF------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 115
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 166
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 167 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 226 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 117
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 168
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 169 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 228 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 115
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 166
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 167 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 226 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 115
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 166
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
D+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 167 DDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 226 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 52 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 109
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 110 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 160
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 161 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 219
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 220 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 54 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 111
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 112 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 162
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 163 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 221
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 222 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 37/294 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST--VVAIKAI--DLDQSRTDLDSIRRETKTMSLLS 84
+ +L IG G A K + + + T + A+K + +L D+D ++ E S
Sbjct: 22 FDLLRVIGRGSYA---KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 85 -HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
HP ++ H F +SRL+ V+ +++ G L + LPE E AL+Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 136
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
LH +G ++RD+K N+L DS+G +KL D+G+ P + GTP ++A
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSXFCGTPNYIA 189
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRPPL----SHLPPEKSLLMKMTQRFRFS-DY 258
PE++R Y F D W+ G+ E+ GR P S P+++ T+ + F
Sbjct: 190 PEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----TEDYLFQVIL 243
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA------EKLMKHSFFKNCN 306
EK ++I + S ++ S L++DP +R + H FF+N +
Sbjct: 244 EKQIRIP---RSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVD 294
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 37/294 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST--VVAIKAI--DLDQSRTDLDSIRRETKTMSLLS 84
+ +L IG G A K + + + T + A+K + +L D+D ++ E S
Sbjct: 7 FDLLRVIGRGSYA---KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 85 -HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
HP ++ H F +SRL+ V+ +++ G L + LPE E AL+Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 121
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
LH +G ++RD+K N+L DS+G +KL D+G+ P + GTP ++A
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSXFCGTPNYIA 174
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRPPL----SHLPPEKSLLMKMTQRFRFS-DY 258
PE++R Y F D W+ G+ E+ GR P S P+++ T+ + F
Sbjct: 175 PEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----TEDYLFQVIL 228
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE------KLMKHSFFKNCN 306
EK ++I + S ++ S L++DP +R + H FF+N +
Sbjct: 229 EKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 279
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 TXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 43/301 (14%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
E+G G +V K +P ++A+K I R ++S +E K + + ++ C
Sbjct: 58 ELGRGAYGVVEKMRHVP-SGQIMAVKRI-----RATVNS--QEQKRLLMDLDISMRTVDC 109
Query: 94 SFSV--------DSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKETLSALSY 143
F+V + +W+ M M SL G +PE + + + AL +
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 168
Query: 144 LHNQ-GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
LH++ +HRDVK N+L ++ G VK+ DFG+S + + S T AG +M
Sbjct: 169 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--------SVAKTIDAGCKPYM 220
Query: 203 APEVIR---SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYE 259
APE I + GYS K+DIWS GIT +ELA R P L ++ + E
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-------E 273
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK-NCNKGVEF--FVKNV 316
+ ++ KFS F D + CL ++ +RP+ +LM+H FF + +KG + FVK +
Sbjct: 274 PSPQL--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLI 331
Query: 317 L 317
L
Sbjct: 332 L 332
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 31/293 (10%)
Query: 20 IQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI--DLDQSRTDLDSIRRET 77
+Q L +++ +G G V+ A + AIKA+ D+ D++ E
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAE-FKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 78 KTMSL-LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKE 136
+ +SL HP + + C+F L+ VM +++ G L I SC L E
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA--E 127
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
+ L +LH++G ++RD+K NIL D DG +K+ADFG+ + G A +
Sbjct: 128 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE-------NMLGDAKTNEFC 180
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL--MKMTQRFR 254
GTP ++APE++ Y+ D WSFG+ E+ G+ P H E+ L ++M F
Sbjct: 181 GTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRMDNPF- 237
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE-KLMKHSFFKNCN 306
Y + L+ + KD++ ++P KR + +H F+ N
Sbjct: 238 ---YPRWLE---------KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 37/294 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST--VVAIKAI--DLDQSRTDLDSIRRETKTMSLLS 84
+ +L IG G A K + + + T + A++ + +L D+D ++ E S
Sbjct: 54 FDLLRVIGRGSYA---KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 85 -HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
HP ++ H F +SRL+ V+ +++ G L + LPE E AL+Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 168
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
LH +G ++RD+K N+L DS+G +KL D+G+ P + GTP ++A
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSTFCGTPNYIA 221
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRPPL----SHLPPEKSLLMKMTQRFRFS-DY 258
PE++R Y F D W+ G+ E+ GR P S P+++ T+ + F
Sbjct: 222 PEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----TEDYLFQVIL 275
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE------KLMKHSFFKNCN 306
EK ++I + S ++ S L++DP +R + H FF+N +
Sbjct: 276 EKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G + + E A
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTAT 117
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 168
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 169 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 228 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 114
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+A+FG S H S+
Sbjct: 115 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV---------HAPSSRR 165
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 166 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 225 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 115
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+A+FG S H S+
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV---------HAPSSRR 166
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T + GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 167 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 226 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 114
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 115 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 165
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 166 XXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 225 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 30/260 (11%)
Query: 53 STVVAIKAI--DLDQSRTDLDSIRRETKTMSL-LSHPNILNAHCSFSVDSRLWVVMPFMS 109
+ AIKA+ D+ D++ E + +SL HP + + C+F L+ VM +++
Sbjct: 42 NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101
Query: 110 CGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKL 169
G L I SC L E + L +LH++G ++RD+K NIL D DG +K+
Sbjct: 102 GGDLMYHIQSCHKFDLSRATFYAA--EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI 159
Query: 170 ADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL 229
ADFG+ + G A GTP ++APE++ Y+ D WSFG+ E+
Sbjct: 160 ADFGMCKE-------NMLGDAKTNXFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEM 211
Query: 230 AHGRPPLSHLPPEKSLL--MKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDP 287
G+ P H E+ L ++M F Y + L+ + KD++ ++P
Sbjct: 212 LIGQSPF-HGQDEEELFHSIRMDNPF----YPRWLE---------KEAKDLLVKLFVREP 257
Query: 288 SKRPSAE-KLMKHSFFKNCN 306
KR + +H F+ N
Sbjct: 258 EKRLGVRGDIRQHPLFREIN 277
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 39/291 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-----SRTDLDSIRRETKTMSLL 83
Y+ + ++G G Y + + D A +AI + + + ++ ++ E + L
Sbjct: 23 YQRVKKLGSGA----YGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSL--QSIISSCFPDGLPEPCIAIVLKETLSAL 141
HPNI+ + F ++VM G L + I+ F E A+++K+ LS
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS----EVDAAVIMKQVLSGT 134
Query: 142 SYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+YLH +HRD+K N+L +S D +K+ DFG+SA H G M + GT
Sbjct: 135 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-------HFEVGGKM-KERLGT 186
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-D 257
Y++APEV+R Y K D+WS G+ L G PP ++ ++K ++ +FS D
Sbjct: 187 AYYIAPEVLRKK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQE--ILKRVEKGKFSFD 242
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF-KNCNK 307
++ D+ K+ +V L +PSKR SAE+ + H + K C++
Sbjct: 243 PPDWTQVSDEAKQ-------LVKLMLTYEPSKRISAEEALNHPWIVKFCSQ 286
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 115
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 166
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 167 XXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 226 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 XXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 22/243 (9%)
Query: 67 RTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP 126
R+D E M+ + P ++ C+F D L++VM +M G L +++S+ +P
Sbjct: 116 RSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVP 172
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH 186
E E + AL +H+ G +HRDVK N+L D G +KLADFG + E H
Sbjct: 173 EKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 187 HGSAMITDMAGTPYWMAPEVIRSHTG---YSFKADIWSFGITALELAHGRPPLSHLPPEK 243
+ GTP +++PEV++S G Y + D WS G+ E+ G P
Sbjct: 233 DTA------VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY----AD 282
Query: 244 SLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK--RPSAEKLMKHSF 301
SL+ + + D++ +L + + + S+ K+++ + L + R E++ +H F
Sbjct: 283 SLVGTYS---KIMDHKNSLCFPE-DAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 338
Query: 302 FKN 304
FKN
Sbjct: 339 FKN 341
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 113
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 114 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 164
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 165 DTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 224 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 43/301 (14%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
E+G G +V K +P ++A+K I R ++S +E K + + ++ C
Sbjct: 14 ELGRGAYGVVEKMRHVP-SGQIMAVKRI-----RATVNS--QEQKRLLMDLDISMRTVDC 65
Query: 94 SFSV--------DSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKETLSALSY 143
F+V + +W+ M M SL G +PE + + + AL +
Sbjct: 66 PFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 144 LHNQ-GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
LH++ +HRDVK N+L ++ G VK+ DFG+S + + A D PY M
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD-------DVAKDIDAGCKPY-M 176
Query: 203 APEVIR---SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYE 259
APE I + GYS K+DIWS GIT +ELA R P L ++ + E
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-------E 229
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK-NCNKGVEF--FVKNV 316
+ ++ KFS F D + CL ++ +RP+ +LM+H FF + +KG + FVK +
Sbjct: 230 PSPQL--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLI 287
Query: 317 L 317
L
Sbjct: 288 L 288
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 115
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 166
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 167 AALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 226 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA+K ID Q + + L + RE + M +L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + T G+P + APE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDT-FCGSPPYAAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 236
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +PSKR + E++MK
Sbjct: 237 ------STDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 164 AALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G++ + E A
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTAT 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 113 YITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 163
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP + +
Sbjct: 164 AALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVE 222
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 223 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA+K ID Q + + L + RE + M +L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + T G+P + APE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDT-FCGSPPYAAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 236
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +PSKR + E++MK
Sbjct: 237 ------STDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
L +P+++ H F D ++VV+ SL + + EP +++T+ +
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQ 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLHN +HRD+K GN+ + D VK+ DFG++ I D+ GTP ++
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-------EFDGERKKDLCGTPNYI 193
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ G+SF+ DIWS G L G+PP E S L + R + ++Y
Sbjct: 194 APEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPF-----ETSCLKETYIRIKKNEYSVPR 247
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I N S + M L DP+ RPS +L+ FF
Sbjct: 248 HI---NPVASALIRRM----LHADPTLRPSVAELLTDEFF 280
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA+K ID Q + + L + RE + M +L+H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGWMKEKEARAKFRQIVSAVQYCH 123
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + T G+P + APE
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDT-FCGSPPYAAPE 175
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 229
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +PSKR + E++MK
Sbjct: 230 ------STDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+RRE + S L HPNIL + F +R+++++ + G + + E A
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTAT 117
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ E +ALSY H++ +HRD+K N+L S G +K+ADFG S H S+
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV---------HAPSSRR 168
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
+ GT ++ PE+I + K D+WS G+ E G+PP +++
Sbjct: 169 XXLXGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
F F D+ + +D+++ L +PS+RP ++++H +
Sbjct: 228 FTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA++ ID Q + + L + RE + M +L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + T G+P + APE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDT-FCGSPPYAAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 236
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +PSKR + E++MK
Sbjct: 237 ------STDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
L +P+++ H F D ++VV+ SL + + EP +++T+ +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQ 156
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLHN +HRD+K GN+ + D VK+ DFG++ I D+ GTP ++
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-------EFDGERKKDLCGTPNYI 209
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ G+SF+ DIWS G L G+PP E S L + R + ++Y
Sbjct: 210 APEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPF-----ETSCLKETYIRIKKNEYSVPR 263
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I N S + M L DP+ RPS +L+ FF
Sbjct: 264 HI---NPVASALIRRM----LHADPTLRPSVAELLTDEFF 296
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 25 DPSSYKILDEIGVGVSAIVY--KAICIPMDSTVVAIKAIDLDQSRT-DLDSIRRETKTMS 81
DPS +++L +G G V+ K I + A+K + + D + E +
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
++HP I+ H +F + +L++++ F+ G L + +S E + L E AL
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALAL 140
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+LH+ G ++RD+K NIL D +G +KL DFG+S E H + GT +
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS----FCGTVEY 193
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
MAPEV+ + G++ AD WSFG+ E+ G P ++++ M + + +
Sbjct: 194 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF--- 249
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA-----EKLMKHSFFKNCN 306
S + ++ ++P+ R A E++ +HSFF +
Sbjct: 250 ---------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 290
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA++ ID Q + + L + RE + M +L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + + G+P + APE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKL-DEFCGSPPYAAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 236
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +PSKR + E++MK
Sbjct: 237 ------STDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 25 DPSSYKILDEIGVGVSAIVY--KAICIPMDSTVVAIKAIDLDQSRT-DLDSIRRETKTMS 81
DPS +++L +G G V+ K I + A+K + + D + E +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
++HP I+ H +F + +L++++ F+ G L + +S E + L E AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALAL 139
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+LH+ G ++RD+K NIL D +G +KL DFG+S E H + GT +
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS----FCGTVEY 192
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
MAPEV+ + G++ AD WSFG+ E+ G P ++++ M + + +
Sbjct: 193 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF--- 248
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA-----EKLMKHSFFKNCN 306
S + ++ ++P+ R A E++ +HSFF +
Sbjct: 249 ---------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 25 DPSSYKILDEIGVGVSAIVY--KAICIPMDSTVVAIKAIDLDQSRT-DLDSIRRETKTMS 81
DPS +++L +G G V+ K I + A+K + + D + E +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
++HP I+ H +F + +L++++ F+ G L + +S E + L E AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALAL 139
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+LH+ G ++RD+K NIL D +G +KL DFG+S + H A GT +
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-----HEKKAY--SFCGTVEY 192
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
MAPEV+ + G++ AD WSFG+ E+ G P ++++ M + + +
Sbjct: 193 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF--- 248
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA-----EKLMKHSFFKNCN 306
S + ++ ++P+ R A E++ +HSFF +
Sbjct: 249 ---------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 67 RTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP 126
R+D E M+ + P ++ +F D L++VM +M G L +++S+ +P
Sbjct: 115 RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVP 171
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH 186
E E + AL +H+ G +HRDVK N+L D G +KLADFG + +
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM------NK 225
Query: 187 HGSAMITDMAGTPYWMAPEVIRSHTG---YSFKADIWSFGITALELAHGRPPLSHLPPEK 243
G GTP +++PEV++S G Y + D WS G+ E+ G P
Sbjct: 226 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----AD 281
Query: 244 SLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK--RPSAEKLMKHSF 301
SL+ + + +++ +L D N S+ K+++ + L + R E++ +H F
Sbjct: 282 SLVGTYS---KIMNHKNSLTFPDDN-DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 337
Query: 302 FKN 304
FKN
Sbjct: 338 FKN 340
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 67 RTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP 126
R+D E M+ + P ++ +F D L++VM +M G L +++S+ +P
Sbjct: 110 RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVP 166
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH 186
E E + AL +H+ G +HRDVK N+L D G +KLADFG + +
Sbjct: 167 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM------NK 220
Query: 187 HGSAMITDMAGTPYWMAPEVIRSHTG---YSFKADIWSFGITALELAHGRPPLSHLPPEK 243
G GTP +++PEV++S G Y + D WS G+ E+ G P
Sbjct: 221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----AD 276
Query: 244 SLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK--RPSAEKLMKHSF 301
SL+ + + +++ +L D N S+ K+++ + L + R E++ +H F
Sbjct: 277 SLVGTYS---KIMNHKNSLTFPDDN-DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332
Query: 302 FKN 304
FKN
Sbjct: 333 FKN 335
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 67 RTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP 126
R+D E M+ + P ++ +F D L++VM +M G L +++S+ +P
Sbjct: 115 RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVP 171
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH 186
E E + AL +H+ G +HRDVK N+L D G +KLADFG + +
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM------NK 225
Query: 187 HGSAMITDMAGTPYWMAPEVIRSHTG---YSFKADIWSFGITALELAHGRPPLSHLPPEK 243
G GTP +++PEV++S G Y + D WS G+ E+ G P
Sbjct: 226 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----AD 281
Query: 244 SLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK--RPSAEKLMKHSF 301
SL+ + + +++ +L D N S+ K+++ + L + R E++ +H F
Sbjct: 282 SLVGTYS---KIMNHKNSLTFPDDN-DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 337
Query: 302 FKN 304
FKN
Sbjct: 338 FKN 340
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 22/286 (7%)
Query: 25 DPSSYKILDEIGVGVSAIVY--KAICIPMDSTVVAIKAIDLDQSRT-DLDSIRRETKTMS 81
DPS +++L +G G V+ + + P + A+K + + D + E ++
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA 85
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
++HP ++ H +F + +L++++ F+ G L + +S E + L E L
Sbjct: 86 DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALGL 143
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+LH+ G ++RD+K NIL D +G +KL DFG+S + H A GT +
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID-----HEKKAY--SFCGTVEY 196
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
MAPEV+ + G+S AD WS+G+ E+ G P ++++ + + + + T
Sbjct: 197 MAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLST 255
Query: 262 LKIKDKNKKFSRA-FKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
+ + RA FK A+ L P AE++ +H F+ +
Sbjct: 256 -----EAQSLLRALFKRNPANRLGSGPD---GAEEIKRHVFYSTID 293
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA+K ID Q + + L + RE + M +L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + G P + APE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKL-DAFCGAPPYAAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 236
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +PSKR + E++MK
Sbjct: 237 ------STDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VAIK ID Q + T L + RE + M +L+H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L+++M + S G + + + + E ++ +SA+ Y H
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCH 128
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G + T G+P + APE
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTVGGKLDT-FCGSPPYAAPE 180
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 234
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +P KR + E++MK
Sbjct: 235 ------STDCENLLKRFLVLNPIKRGTLEQIMK 261
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 31/293 (10%)
Query: 14 GTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI---DLDQSRTDL 70
G + K Q+ L+ + I +G G VY A ++A+K + L+++ +
Sbjct: 1 GPLGSKRQWTLE--DFDIGRPLGKGKFGNVYLARE-RQSKFILALKVLFKTQLEKAGVE- 56
Query: 71 DSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCI 130
+RRE + S L HPNIL + F +R+++++ + G++ + E
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRT 114
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSA 190
A + E +ALSY H++ +HRD+K N+L S+G +K+ADFG S H S+
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV---------HAPSS 165
Query: 191 MITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMT 250
T + GT ++ PE+I + K D+WS G+ E G PP +++
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F F D+ + +D+++ L + S+R + ++++H + K
Sbjct: 225 VEFTFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 129/300 (43%), Gaps = 38/300 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRR----ETKTMSLLS 84
Y+ LD +G G A VYKA + +VAIK I L D I R E K + LS
Sbjct: 12 YEKLDFLGEGQFATVYKARD-KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ +F S + +V FM L+ II P A +L TL L YL
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM-TLQGLEYL 128
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
H LHRD+K N+L D +G +KLADFG++ S P+ + H T ++ AP
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-------TRWYRAP 181
Query: 205 EVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR---------- 254
E++ Y D+W+ G EL P L P S L ++T+ F
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFL----PGDSDLDQLTRIFETLGTPTEEQW 237
Query: 255 -----FSDYE--KTLKIKDKNKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
DY K+ + FS A D++ +P R +A + +K +F N
Sbjct: 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 57/318 (17%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSR----TDLDSIRRETKTMSLLS 84
Y + IG G +V AI + AIK ++ ++ R D++ I+ E + M L
Sbjct: 28 YHLKGAIGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPE-----------PC---- 129
HPNI + + + + +VM G L ++ D + PC
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 130 -----------------------IAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS 166
I+ ++++ SAL YLHNQG HRD+K N L ++ S
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 167 --VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR-SHTGYSFKADIWSFG 223
+KL DFG+S Y+ ++ ++G +T AGTPY++APEV+ ++ Y K D WS G
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYG---MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 224 ITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCL 283
+ L G P + ++ + ++ F + + S +D++++ L
Sbjct: 264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNV--------LSPLARDLLSNLL 315
Query: 284 DQDPSKRPSAEKLMKHSF 301
+++ +R A + ++H +
Sbjct: 316 NRNVDERFDAMRALQHPW 333
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
L +P+++ H F D ++VV+ SL + + EP +++T+ +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQ 156
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLHN +HRD+K GN+ + D VK+ DFG++ I G T + GTP ++
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI------EFDGERKKT-LCGTPNYI 209
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ G+SF+ DIWS G L G+PP E S L + R + ++Y
Sbjct: 210 APEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPF-----ETSCLKETYIRIKKNEYSVPR 263
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I N S + M L DP+ RPS +L+ FF
Sbjct: 264 HI---NPVASALIRRM----LHADPTLRPSVAELLTDEFF 296
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VAIK ID Q + T L + RE + M +L+H
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L+++M + S G + + + + E ++ +SA+ Y H
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCH 131
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S + + G P + APE
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTVGGKLDAFCGAPPYAAPE 183
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G LP + L ++ +R Y +
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYM- 237
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
S ++++ L +P KR + E++MK
Sbjct: 238 ------STDCENLLKRFLVLNPIKRGTLEQIMK 264
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPN 87
Y+++ ++G G IV+K+I V K D Q+ TD RE ++ LS H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 88 ILNAHCSFSVDSR--LWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+N D+ +++V +M L ++I + + EP V+ + + + YL
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA----NILEPVHKQYVVYQLIKVIKYL 125
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVS--------------ASIYEPSHHHHHGSA 190
H+ G LHRD+K NIL +++ VK+ADFG+S SI E + +
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 191 MITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
++TD T ++ APE++ T Y+ D+WS G E+ G+P
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 39/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHPN 87
Y L++IG G +VYKA ++ A+K I L++ + S RE + L H N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGET--FALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I+ + RL +V + L+ ++ C GL L + L+ ++Y H++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
LHRD+K N+L + +G +K+ADFG++ + P + H T ++ AP+V+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-------TLWYRAPDVL 172
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------- 254
YS DIWS G E+ +G P L P S ++ + FR
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTP----LFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 255 ---------FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC 305
F+ YE L + K + D+++ L DP++R +A++ ++H++FK
Sbjct: 229 TELPKYDPNFTVYE-PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Query: 306 N 306
N
Sbjct: 288 N 288
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 21 QYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ--SRTDLDSIRRETK 78
Q L ++IL IG G V + + V A+K ++ + R + R E
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEV-AVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 79 TMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ I H +F D+ L++VM + G L +++S F D LPE L E +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMV 185
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
A+ +H ++HRD+K NIL D +G ++LADFG + E G+ + GT
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME------DGTVQSSVAVGT 239
Query: 199 PYWMAPEVIRSHTG----YSFKADIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQR 252
P +++PE++++ G Y + D WS G+ E+ +G P L +M +R
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299
Query: 253 FRF 255
F+F
Sbjct: 300 FQF 302
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 39/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHPN 87
Y L++IG G +VYKA ++ A+K I L++ + S RE + L H N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGET--FALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I+ + RL +V + L+ ++ C GL L + L+ ++Y H++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
LHRD+K N+L + +G +K+ADFG++ + P + H T ++ AP+V+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-------TLWYRAPDVL 172
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------- 254
YS DIWS G E+ +G P L P S ++ + FR
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAP----LFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 255 ---------FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC 305
F+ YE L + K + D+++ L DP++R +A++ ++H++FK
Sbjct: 229 TELPKYDPNFTVYE-PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Query: 306 N 306
N
Sbjct: 288 N 288
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
L +P+++ H F D ++VV+ SL + + EP +++T+ +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQ 156
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
YLHN +HRD+K GN+ + D VK+ DFG++ I + GTP ++
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-------EFDGERKKXLCGTPNYI 209
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ G+SF+ DIWS G L G+PP E S L + R + ++Y
Sbjct: 210 APEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPF-----ETSCLKETYIRIKKNEYSVPR 263
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I N S + M L DP+ RPS +L+ FF
Sbjct: 264 HI---NPVASALIRRM----LHADPTLRPSVAELLTDEFF 296
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 39/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR-RETKTMSLLSHPN 87
Y L++IG G +VYKA ++ A+K I L++ + S RE + L H N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGET--FALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I+ + RL +V + L+ ++ C GL L + L+ ++Y H++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
LHRD+K N+L + +G +K+ADFG++ + P + H T ++ AP+V+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-------TLWYRAPDVL 172
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR------------- 254
YS DIWS G E+ +G P L P S ++ + FR
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTP----LFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 255 ---------FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC 305
F+ YE L + K + D+++ L DP++R +A++ ++H++FK
Sbjct: 229 TELPKYDPNFTVYE-PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Query: 306 N 306
N
Sbjct: 288 N 288
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 134
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P +A +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANAFV 193
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 194 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 231
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 232 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
Query: 302 FKNCN 306
F++
Sbjct: 292 FESVT 296
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 129/293 (44%), Gaps = 44/293 (15%)
Query: 52 DSTVVAIKAIDLDQSRTDLDS---------IRRETKTMSLLSHPNILNAHCSFSVDSRLW 102
+ + IK D+ R D+ I E + L HPNI+ F +
Sbjct: 63 EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY 122
Query: 103 VVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS 161
+V F G L + II+ E A ++K+ LS + YLH +HRD+K NIL
Sbjct: 123 LVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILL 179
Query: 162 DSDGS---VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKAD 218
++ S +K+ DFG+S S + + + D GT Y++APEV++ Y+ K D
Sbjct: 180 ENKNSLLNIKIVDFGLS-SFFSKDYK-------LRDRLGTAYYIAPEVLKKK--YNEKCD 229
Query: 219 IWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ---RFRFSDYEKTLKIKDKNKKFSRAF 275
+WS G+ L G PP ++ ++ K+ + F F+D+ K S
Sbjct: 230 VWSCGVIMYILLCGYPPFGG-QNDQDIIKKVEKGKYYFDFNDW----------KNISDEA 278
Query: 276 KDMVASCLDQDPSKRPSAEKLMKHSFFK----NCNKGVEFFVKNVLHGLRSVE 324
K+++ L D +KR +AE+ + + K N NK + + L +R E
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFE 331
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E +S+++HP I+ +F +++++M ++ G L S++ P P
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAA 113
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E AL YLH++ ++RD+K NIL D +G +K+ DFG + + + ++ +
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYX----------L 163
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ S Y+ D WSFGI E+ G P K+ + RF
Sbjct: 164 CGTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKNC 305
+ F+ KD+++ + +D S+R E + H +FK
Sbjct: 223 PPF------------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 28/293 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+Y LD++G G A VYK D+ +VA+K I L+ + RE + L H N
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I+ H + L +V ++ L+ + C + + + + L + L L+Y H Q
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
LHRD+K N+L + G +KLADFG++ + P+ + + T ++ P+++
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-------TLWYRPPDIL 172
Query: 208 RSHTGYSFKADIWSFGITALELAHGRP--PLSHLPPEKSLLMKM--------------TQ 251
T YS + D+W G E+A GRP P S + + + ++ +
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 252 RFRFSDYEKTL--KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
F+ +Y K + + D++ L + R SAE MKH FF
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 31/293 (10%)
Query: 14 GTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI---DLDQSRTDL 70
G + K Q+ L+ + I +G G VY A ++A+K + L+++ +
Sbjct: 1 GPLGSKRQWTLE--DFDIGRPLGKGKFGNVYLA-RERQSKFILALKVLFKTQLEKAGVE- 56
Query: 71 DSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCI 130
+RRE + S L HPNIL + F +R+++++ + G++ + E
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRT 114
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSA 190
A + E +ALSY H++ +HRD+K N+L S+G +K+ADFG S H S+
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV---------HAPSS 165
Query: 191 MITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMT 250
+ GT ++ PE+I + K D+WS G+ E G PP +++
Sbjct: 166 RRDTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F F D+ + +D+++ L + S+R + ++++H + K
Sbjct: 225 VEFTFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 24/276 (8%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRETKTMSLLSHP 86
+K+ + +G G A VY+A I VAIK ID + ++ E K L HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIH-TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
+IL + F + +++V+ G + + + E + + ++ + YLH+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQIITGMLYLHS 130
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
G LHRD+ N+L + ++K+ADFG++ + P H+ + GTP +++PE
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-------TLCGTPNYISPE- 182
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
I + + + ++D+WS G L GRPP + +L + +DYE
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----NKVVLADYEMP----- 232
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
S KD++ L ++P+ R S ++ H F
Sbjct: 233 --SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 32/288 (11%)
Query: 23 PLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSIRRETKTMS 81
P Y++L IG G K I D ++ K +D + + + E +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 82 LLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKET 137
L HPNI+ + ++ L++VM + G L S+I+ + L E + V+ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 138 LSALSYLHNQ---GH--LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
AL H + GH LHRD+K N+ D +VKL DFG++ + +H ++
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-------NHDTSFA 173
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ- 251
GTPY+M+PE + + Y+ K+DIWS G EL PP + +K L K+ +
Sbjct: 174 KTFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREG 231
Query: 252 RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+FR Y ++S +++ L+ RPS E+++++
Sbjct: 232 KFRRIPY-----------RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRF 136
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P ++ +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFV 195
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + S +D+W+ G +L G PP
Sbjct: 196 ----GTAQYVSPELLTEKSA-SKSSDLWALGCIIYQLVAGLPP----------------- 233
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 234 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
Query: 302 FKNCN 306
F++
Sbjct: 294 FESVT 298
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 34/316 (10%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPN 87
Y++ +E+G G ++V + + IP A K I+ + S D + RE + LL HPN
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAA-KIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSL-QSIIS-SCFPDGLPEPCIAIVLKETLSALSYLH 145
I+ H S S + ++V ++ G L + I++ + + CI ++ L ++++ H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI----QQILESVNHCH 120
Query: 146 NQGHLHRDVKAGNIL--SDSDG-SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
G +HRD+K N+L S S G +VKLADFG++ + + G AGTP ++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFG------FAGTPGYL 173
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
+PEV+R Y D+W+ G+ L G PP ++ Q+ + Y+
Sbjct: 174 SPEVLRKDP-YGKPVDMWACGVILYILLVGYPPFWDEDQH-----RLYQQIKAGAYDFPS 227
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVKNVLHGLRS 322
D + KD++ L +P+KR +A + +KH + C + V +++H +
Sbjct: 228 PEWD---TVTPEAKDLINKMLTINPAKRITASEALKHPWI--CQRST---VASMMHRQET 279
Query: 323 VE--ERFKESRNHVGA 336
V+ ++F R GA
Sbjct: 280 VDCLKKFNARRKLKGA 295
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 28/291 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDST-----VVAIKAIDLDQSRTDLDSIRRETKTMSL 82
++++L +G G V+ I T + +K + Q + R E + +
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 83 LSH-PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ P ++ H +F +++L +++ +++ G L + +S + E + I + E + AL
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLAL 172
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+LH G ++RD+K NIL DS+G V L DFG+S + D GT +
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY------DFCGTIEY 226
Query: 202 MAPEVIR-SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
MAP+++R +G+ D WS G+ EL G P + + EK+ ++++R S+
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT-VDGEKNSQAEISRRILKSE--- 282
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS-----AEKLMKHSFFKNCN 306
++ S KD++ L +DP KR A+++ +H FF+ N
Sbjct: 283 ----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 31/281 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT--DLDSIRRETKTMSLLSHP 86
Y + D +GVG V K + VA+K ++ + R+ + I+RE + + L HP
Sbjct: 13 YVLGDTLGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
+I+ + S + ++VM ++S G L I C + E + ++ LSA+ Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
+HRD+K N+L D+ + K+ADFG+S + + + D G+P + APEV
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--------GEFLRDSCGSPNYAAPEV 181
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLS--HLPPEKSLLMKMTQR-FRFSDYEKTLK 263
I + DIWS G+ L G P H+P +L K+ F +Y
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLFKKIRGGVFYIPEY----- 233
Query: 264 IKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+R+ ++ L DP KR + + + +H +FK
Sbjct: 234 -------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 133/311 (42%), Gaps = 56/311 (18%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P +Y +G G Y ++C +D VAIK + QS RE +
Sbjct: 41 PKTYVSPTHVGSGA----YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ S L ++VMPFM LQ I+ F E I ++
Sbjct: 97 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFS----EEKIQYLVY 151
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ G +HRD+K GN+ + D +K+ DFG++ H A +T
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA----------RHADAEMTGY 201
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
T ++ APEVI S Y+ DIWS G E+ G+ L K L ++TQ +
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT----LFKGKDYLDQLTQILKV 257
Query: 256 SDY---EKTLKIKDK-------------NKKFSRAF-------KDMVASCLDQDPSKRPS 292
+ E K+ DK K F++ F D++ L+ D KR +
Sbjct: 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 293 AEKLMKHSFFK 303
A + + H FF+
Sbjct: 318 AAQALTHPFFE 328
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 32/288 (11%)
Query: 23 PLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSIRRETKTMS 81
P Y++L IG G K I D ++ K +D + + + E +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 82 LLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKET 137
L HPNI+ + ++ L++VM + G L S+I+ + L E + V+ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 138 LSALSYLHNQ---GH--LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
AL H + GH LHRD+K N+ D +VKL DFG++ + +H ++
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-------NHDTSFA 173
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ- 251
GTPY+M+PE + + Y+ K+DIWS G EL PP + +K L K+ +
Sbjct: 174 KAFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREG 231
Query: 252 RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+FR Y ++S +++ L+ RPS E+++++
Sbjct: 232 KFRRIPY-----------RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 32/288 (11%)
Query: 23 PLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDL-DQSRTDLDSIRRETKTMS 81
P Y++L IG G K I D ++ K +D + + + E +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 82 LLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKET 137
L HPNI+ + ++ L++VM + G L S+I+ + L E + V+ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 138 LSALSYLHNQ---GH--LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
AL H + GH LHRD+K N+ D +VKL DFG++ + +H
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-------NHDEDFA 173
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ- 251
+ GTPY+M+PE + + Y+ K+DIWS G EL PP + +K L K+ +
Sbjct: 174 KEFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREG 231
Query: 252 RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+FR Y ++S +++ L+ RPS E+++++
Sbjct: 232 KFRRIPY-----------RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 133
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P ++ +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFV 192
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 193 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 230
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 231 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 290
Query: 302 FKNCN 306
F++
Sbjct: 291 FESVT 295
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 34/316 (10%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPN 87
Y++ +E+G G ++V + + IP A K I+ + S D + RE + LL HPN
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAA-KIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSL-QSIIS-SCFPDGLPEPCIAIVLKETLSALSYLH 145
I+ H S S + ++V ++ G L + I++ + + CI ++ L ++++ H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI----QQILESVNHCH 120
Query: 146 NQGHLHRDVKAGNIL--SDSDG-SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
G +HRD+K N+L S S G +VKLADFG++ + + G AGTP ++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFG------FAGTPGYL 173
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
+PEV+R Y D+W+ G+ L G PP ++ Q+ + Y+
Sbjct: 174 SPEVLRKDP-YGKPVDMWACGVILYILLVGYPPFWDEDQH-----RLYQQIKAGAYDFPS 227
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVKNVLHGLRS 322
D + KD++ L +P+KR +A + +KH + C + V +++H +
Sbjct: 228 PEWD---TVTPEAKDLINKMLTINPAKRITASEALKHPWI--CQRST---VASMMHRQET 279
Query: 323 VE--ERFKESRNHVGA 336
V+ ++F R GA
Sbjct: 280 VDCLKKFNARRKLKGA 295
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 137
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P ++ +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFV 196
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 197 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 234
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 235 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 294
Query: 302 FKNCN 306
F++
Sbjct: 295 FESVT 299
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 133/311 (42%), Gaps = 56/311 (18%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P +Y +G G Y ++C +D VAIK + QS RE +
Sbjct: 23 PKTYVSPTHVGSGA----YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ S L ++VMPFM LQ I+ F E I ++
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFS----EEKIQYLVY 133
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ G +HRD+K GN+ + D +K+ DFG++ H A +T
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA----------RHADAEMTGY 183
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
T ++ APEVI S Y+ DIWS G E+ G+ L K L ++TQ +
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT----LFKGKDYLDQLTQILKV 239
Query: 256 SDY---EKTLKIKDK-------------NKKFSRAF-------KDMVASCLDQDPSKRPS 292
+ E K+ DK K F++ F D++ L+ D KR +
Sbjct: 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 299
Query: 293 AEKLMKHSFFK 303
A + + H FF+
Sbjct: 300 AAQALTHPFFE 310
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 27/234 (11%)
Query: 74 RRETKTMSL-----LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
+RE +M + L+H +++ H F + ++VV+ SL + L EP
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEP 117
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
L++ + YLH +HRD+K GN+ + D VK+ DFG++ + + G
Sbjct: 118 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDG 171
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
T + GTP ++APEV+ S G+SF+ D+WS G L G+PP E S L +
Sbjct: 172 ERKKT-LCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE 224
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R + ++Y K + ++ L DP+ RP+ +L+ FF
Sbjct: 225 TYLRIKKNEYSIP-------KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 111
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 170
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 171 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 208
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 209 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 268
Query: 302 FKNCN 306
F++
Sbjct: 269 FESVT 273
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 171
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 172 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 209
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 210 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 269
Query: 302 FKNCN 306
F++
Sbjct: 270 FESVT 274
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 29/295 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDL-DSIRRETKTMSLLSHPN 87
Y+ L++IG G V+KA +VA+K + LD + S RE + L H N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHE-IVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I+ H D +L +V F L+ SC D PE + L + L L + H++
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFCHSR 120
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
LHRD+K N+L + +G +KLADFG++ + P + SA + T ++ P+V+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY---SAEVV----TLWYRPPDVL 173
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLS----------------HLPPEKSL--LMKM 249
YS D+WS G ELA+ PL P E+ + K+
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 250 TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+ Y T + + K + +D++ + L +P +R SAE+ ++H +F +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 27/234 (11%)
Query: 74 RRETKTMSL-----LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
+RE +M + L+H +++ H F + ++VV+ SL + L EP
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEP 117
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
L++ + YLH +HRD+K GN+ + D VK+ DFG++ + + G
Sbjct: 118 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDG 171
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
T + GTP ++APEV+ S G+SF+ D+WS G L G+PP E S L +
Sbjct: 172 ERKKT-LCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE 224
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R + ++Y K + ++ L DP+ RP+ +L+ FF
Sbjct: 225 TYLRIKKNEYSIP-------KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 61 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 118
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 177
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 178 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 215
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 216 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 275
Query: 302 FKNCN 306
F++
Sbjct: 276 FESVT 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 134
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 193
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 194 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 231
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 232 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
Query: 302 FKNCN 306
F++
Sbjct: 292 FESVT 296
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 113
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 172
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 173 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 210
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 211 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 270
Query: 302 FKNCN 306
F++
Sbjct: 271 FESVT 275
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 114
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 173
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 174 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 211
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 212 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 271
Query: 302 FKNCN 306
F++
Sbjct: 272 FESVT 276
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 136
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 195
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 196 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 233
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 234 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
Query: 302 FKNCN 306
F++
Sbjct: 294 FESVT 298
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 134
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 193
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 194 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 231
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 232 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
Query: 302 FKNCN 306
F++
Sbjct: 292 FESVT 296
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 134
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 193
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 194 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 231
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 232 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
Query: 302 FKNCN 306
F++
Sbjct: 292 FESVT 296
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 133
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 192
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 193 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 230
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 231 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 290
Query: 302 FKNCN 306
F++
Sbjct: 291 FESVT 295
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 136
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 195
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 196 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 233
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 234 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
Query: 302 FKNCN 306
F++
Sbjct: 294 FESVT 298
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 136
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 195
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 196 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 233
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 234 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
Query: 302 FKNCN 306
F++
Sbjct: 294 FESVT 298
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 137
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 196
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 197 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 234
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 235 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 294
Query: 302 FKNCN 306
F++
Sbjct: 295 FESVT 299
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 27/234 (11%)
Query: 74 RRETKTMSL-----LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
+RE +M + L+H +++ H F + ++VV+ SL + L EP
Sbjct: 64 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEP 121
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
L++ + YLH +HRD+K GN+ + D VK+ DFG++ + + G
Sbjct: 122 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDG 175
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
T + GTP ++APEV+ S G+SF+ D+WS G L G+PP E S L +
Sbjct: 176 ERKKT-LCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE 228
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R + ++Y K + ++ L DP+ RP+ +L+ FF
Sbjct: 229 TYLRIKKNEYSIP-------KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 136
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 195
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 196 ----GTAQYVSPELLTEKSAXK-SSDLWALGCIIYQLVAGLPP----------------- 233
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + + K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 234 FRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
Query: 302 FKNCN 306
F++
Sbjct: 294 FESVT 298
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 55 VVAIKAI--DLDQSRTDLDSIRRETKTMSLLSHPNILNA-HCSFSVDSRLWVVMPFMSCG 111
+ AIK + D+ D++ E + ++LL P L H F RL+ VM +++ G
Sbjct: 46 LYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGG 105
Query: 112 SLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLAD 171
L I EP E L +LH +G ++RD+K N++ DS+G +K+AD
Sbjct: 106 DLMYHIQQV--GKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIAD 163
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
FG+ H + GTP ++APE+I ++ Y D W++G+ E+
Sbjct: 164 FGMCKE-------HMMDGVTTREFCGTPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLA 215
Query: 232 GRPPL 236
G+PP
Sbjct: 216 GQPPF 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
S Y++ +E+G G ++V + + + + A K I+ + S D + RE + LL H
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKV-LAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIIS-SCFPDGLPEPCIAIVLKETLSALSY 143
PNI+ H S S + +++ ++ G L + I++ + + CI ++ L A+ +
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI----QQILEAVLH 136
Query: 144 LHNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
H G +HRD+K N+L S +VKLADFG++ + E G AGTP
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG------FAGTPG 189
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
+++PEV+R Y D+W+ G+ L G PP ++ Q+ + Y+
Sbjct: 190 YLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQH-----RLYQQIKAGAYDF 243
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
D + KD++ L +PSKR +A + +KH +
Sbjct: 244 PSPEWD---TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 29/295 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDL-DSIRRETKTMSLLSHPN 87
Y+ L++IG G V+KA +VA+K + LD + S RE + L H N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHE-IVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I+ H D +L +V F L+ SC D PE + L + L L + H++
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFCHSR 120
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
LHRD+K N+L + +G +KLA+FG++ + P + SA + T ++ P+V+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY---SAEVV----TLWYRPPDVL 173
Query: 208 RSHTGYSFKADIWSFGITALELAH-GRP---------------PLSHLPPEKSL--LMKM 249
YS D+WS G ELA+ GRP L P E+ + K+
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 250 TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+ Y T + + K + +D++ + L +P +R SAE+ ++H +F +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 74 RRETKTMSL-----LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
+RE +M + L+H +++ H F + ++VV+ SL + L EP
Sbjct: 58 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEP 115
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
L++ + YLH +HRD+K GN+ + D VK+ DFG++ + +
Sbjct: 116 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-------EYD 168
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
+ GTP ++APEV+ S G+SF+ D+WS G L G+PP E S L +
Sbjct: 169 GERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE 222
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R + ++Y K + ++ L DP+ RP+ +L+ FF
Sbjct: 223 TYLRIKKNEYSIP-------KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 43 RIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 97
Query: 93 CSFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQG 148
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKS 152
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----GSHQFEQLSGSILWMAPEVIR 207
Query: 209 SH--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV----- 262
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 263 -RSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 57 AIKAIDLDQSRT-DLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-Q 114
A+K I+ ++ D +I RE + + L HPNI+ S ++V + G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 115 SIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLAD 171
II E A ++K+ S ++Y+H +HRD+K NIL +S D +K+ D
Sbjct: 111 EIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
FG+S + + + D GT Y++APEV+R Y K D+WS G+ L
Sbjct: 168 FGLSTCFQQNTK--------MKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLS 217
Query: 232 GRPPLSHLPPEKSLLMKM-TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
G PP + E +L ++ T ++ F D + I D KD++ L PS R
Sbjct: 218 GTPPF-YGKNEYDILKRVETGKYAF-DLPQWRTISDDA-------KDLIRKMLTFHPSLR 268
Query: 291 PSAEKLMKHSFFK 303
+A + ++H + +
Sbjct: 269 ITATQCLEHPWIQ 281
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 74 RRETKTMSL-----LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
+RE +M + L+H +++ H F + ++VV+ SL + L EP
Sbjct: 82 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEP 139
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
L++ + YLH +HRD+K GN+ + D VK+ DFG++ + +
Sbjct: 140 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-------EYD 192
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
+ GTP ++APEV+ S G+SF+ D+WS G L G+PP E S L +
Sbjct: 193 GERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE 246
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R + ++Y K + ++ L DP+ RP+ +L+ FF
Sbjct: 247 TYLRIKKNEYSIP-------KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIK--AIDLDQSRTDL-DSIRRETKTMSLLSHPNIL 89
+++G G +VYK +++T VA+K A +D + +L +E K M+ H N++
Sbjct: 37 NKMGEGGFGVVYKGY---VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 90 NAHCSFSVDSR-LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI---VLKETLSALSYLH 145
FS D L +V +M GSL +S C DG P + + + + +++LH
Sbjct: 94 EL-LGFSSDGDDLCLVYVYMPNGSLLDRLS-CL-DGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
H+HRD+K+ NIL D + K++DFG++ + + + + M + + GT +MAPE
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-----TVMXSRIVGTTAYMAPE 205
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLS-HLPPEKSLLMKMTQRFRFSDYEKTL-- 262
+R + K+DI+SFG+ LE+ G P + H P+ L +K E +
Sbjct: 206 ALRGEI--TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
K+ D + A + + CL + +KRP +K+ +
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + F D +L+ + + G L I E C
Sbjct: 84 VTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 141
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 200
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 201 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 238
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 239 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 298
Query: 302 FKNCN 306
F++
Sbjct: 299 FESVT 303
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 112
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ G+ M T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC------KEGISDGATMKT-F 165
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 166 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 225 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 46/301 (15%)
Query: 22 YPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMS 81
+ ++ S + IG G VYK D V +K +D + + R E +
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVD--PTPEQFQAFRNEVAVLR 87
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-----------I 130
H NIL + M +M+ +L + C L + +
Sbjct: 88 KTRHVNIL-------------LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL 134
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSA 190
+ ++T + YLH + +HRD+K+ NI +VK+ DFG++ S GS
Sbjct: 135 IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS-----GSQ 189
Query: 191 MITDMAGTPYWMAPEVIR--SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
+ G+ WMAPEVIR + +SF++D++S+GI EL G P SH+ ++
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP------SAEKLMKHSFF 302
+ + + D K K +A K +VA C+ + +RP S+ +L++HS
Sbjct: 250 VGRGYASPDLSKLY------KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303
Query: 303 K 303
K
Sbjct: 304 K 304
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 32 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 86
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+S +L +V + SL + + + I I ++T + YLH + +HRD
Sbjct: 87 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA-RQTARGMDYLHAKSIIHRD 145
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTG- 212
+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWS-----GSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 213 -YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKDKNKK 270
YSF++D+++FGI EL G+ P S++ + +++M R S D K
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIEMVGRGSLSPDLSKV------RSN 253
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ K ++A CL + +RPS +++
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 115
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ G+ M T
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC------KEGISDGATMKT-F 168
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 169 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 227
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 228 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 271
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 112
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ G+ M T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC------KEGISDGATMKT-F 165
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 166 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 225 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++ IG G A V A + + VA+K ID Q + T L + RE + M +L+H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHV-LTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++VM + S G + + + + E ++ +SA+ Y H
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCH 131
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D D ++K+ADFG S+ G+ + T G+P + APE
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGF-------SNEFTVGNKLDT-FCGSPPYAAPE 183
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPL 236
+ + + D+WS G+ L G P
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 74 RRETKTMSL-----LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
+RE +M + L+H +++ H F + ++VV+ SL + L EP
Sbjct: 84 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEP 141
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
L++ + YLH +HRD+K GN+ + D VK+ DFG++ + +
Sbjct: 142 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-------EYD 194
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
+ GTP ++APEV+ S G+SF+ D+WS G L G+PP E S L +
Sbjct: 195 GERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE 248
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R + ++Y K + ++ L DP+ RP+ +L+ FF
Sbjct: 249 TYLRIKKNEYSIP-------KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 112
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-------GISDGATMKXF 165
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 166 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 225 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 35 RIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 89
Query: 93 CSFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQG 148
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 90 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKS 144
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----GSHQFEQLSGSILWMAPEVIR 199
Query: 209 SH--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV----- 254
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 255 -RSNCPKAMKRLMAECLKKKRDERP 278
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 136
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 195
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 196 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 233
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + + K +K++ D +KF +D+V L D +KR E+ L H F
Sbjct: 234 FRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
Query: 302 FKNCN 306
F++
Sbjct: 294 FESVT 298
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 19 KIQYPLDPSSY-KILDEIGVGVSAIVYKAICI----PMDSTVVAIKAIDLDQSRTDLDSI 73
K ++P D + K L E G ++ +A+ I P ++ VA+K + D + DL +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFG-QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 74 RRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPE----- 127
E + M ++ H NI+N + + D L+V++ + S G+L+ + + P G+
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 128 --PCIAIVLKETLS-------ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
P + K+ +S + YL +Q +HRD+ A N+L + +K+ADFG++ I
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLS 237
++ + + + WMAPE + Y+ ++D+WSFG+ E+ G P
Sbjct: 208 NNIDYYKNTTNGRL-----PVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 238 HLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
+P E+ L+K R DK + M+ C PS+RP+ ++L
Sbjct: 262 GIPVEELFKLLKEGHRM------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 297 MK 298
++
Sbjct: 310 VE 311
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD---SIRRETKTMSLLSH 85
Y + D +GVG V K + VA+K ++ + R+ LD IRRE + + L H
Sbjct: 18 YILGDTLGVGTFGKV-KVGKHELTGHKVAVKILNRQKIRS-LDVVGKIRREIQNLKLFRH 75
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
P+I+ + S S +++VM ++S G L I C L E + ++ LS + Y H
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYI--CKNGRLDEKESRRLFQQILSGVDYCH 133
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+HRD+K N+L D+ + K+ADFG+S + + + G+P + APE
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--------GEFLRXSCGSPNYAAPE 185
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQRFRFSDYEKTLK 263
VI + DIWS G+ L G P H+P +L K+ ++
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFKKICDGIFYTP------ 236
Query: 264 IKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ + + ++ L DP KR + + + +H +FK
Sbjct: 237 -----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
+VAIK I + S+ E + + HPNI+ + L+++M +S G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS---DSDGSVKLA 170
I+ F E + ++ + L A+ YLH+ G +HRD+K N+L D D + ++
Sbjct: 105 DRIVEKGF---YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S + +P GS + T GTP ++APEV+ + YS D WS G+ A L
Sbjct: 162 DFGLS-KMEDP------GSVLST-ACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILL 212
Query: 231 HGRPPLSHLPPEKSLLMKMTQRFRF-SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP K + + F S Y + S + KD + +++DP K
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI---------SDSAKDFIRHLMEKDPEK 263
Query: 290 RPSAEKLMKHSFF 302
R + E+ ++H +
Sbjct: 264 RFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
+VAIK I + S+ E + + HPNI+ + L+++M +S G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS---DSDGSVKLA 170
I+ F E + ++ + L A+ YLH+ G +HRD+K N+L D D + ++
Sbjct: 105 DRIVEKGF---YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S + +P GS + T GTP ++APEV+ + YS D WS G+ A L
Sbjct: 162 DFGLS-KMEDP------GSVLST-ACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILL 212
Query: 231 HGRPPLSHLPPEKSLLMKMTQRFRF-SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP K + + F S Y + S + KD + +++DP K
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI---------SDSAKDFIRHLMEKDPEK 263
Query: 290 RPSAEKLMKHSFF 302
R + E+ ++H +
Sbjct: 264 RFTCEQALQHPWI 276
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 57 AIKAIDLDQSRT-DLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-Q 114
A+K I+ ++ D +I RE + + L HPNI+ S ++V + G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 115 SIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLAD 171
II E A ++K+ S ++Y+H +HRD+K NIL +S D +K+ D
Sbjct: 111 EIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
FG+S + + + D GT Y++APEV+R Y K D+WS G+ L
Sbjct: 168 FGLSTCFQQ--------NTKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLS 217
Query: 232 GRPPLSHLPPEKSLLMKM-TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
G PP + E +L ++ T ++ F D + I D KD++ L PS R
Sbjct: 218 GTPPF-YGKNEYDILKRVETGKYAF-DLPQWRTISDDA-------KDLIRKMLTFHPSLR 268
Query: 291 PSAEKLMKHSFFK 303
+A + ++H + +
Sbjct: 269 ITATQCLEHPWIQ 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 124/277 (44%), Gaps = 37/277 (13%)
Query: 31 ILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN 90
I ++IG G V++A D V + D R ++ RE M L HPNI+
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAER--VNEFLREVAIMKRLRHPNIVL 98
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSII-SSCFPDGLPEPCIAIVLKETLSALSYLHNQGH 149
+ + L +V ++S GSL ++ S + L E + + ++YLHN+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 150 --LHRDVKAGNILSDSDGSVKLADFGVS---ASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
+HRD+K+ N+L D +VK+ DFG+S AS + S AGTP WMAP
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX----------AAGTPEWMAP 208
Query: 205 EVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKI 264
EV+R K+D++SFG+ ELA + P +L P + + +
Sbjct: 209 EVLRDEPSNE-KSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGF 253
Query: 265 KDKNKKFSRAFKDMVAS----CLDQDPSKRPSAEKLM 297
K K + R VA+ C +P KRPS +M
Sbjct: 254 KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 117
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ A +
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-------GISDGATMKXF 170
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 171 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 230 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 273
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 23/276 (8%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIK--AIDLDQSRTDL-DSIRRETKTMSLLSHPNIL 89
+++G G +VYK +++T VA+K A +D + +L +E K M+ H N++
Sbjct: 37 NKMGEGGFGVVYKGY---VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 90 NAHCSFSVDSR-LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI---VLKETLSALSYLH 145
FS D L +V +M GSL +S C DG P + + + + +++LH
Sbjct: 94 EL-LGFSSDGDDLCLVYVYMPNGSLLDRLS-CL-DGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
H+HRD+K+ NIL D + K++DFG++ + + + + M + GT +MAPE
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-----TVMXXRIVGTTAYMAPE 205
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLS-HLPPEKSLLMKMTQRFRFSDYEKTL-- 262
+R + K+DI+SFG+ LE+ G P + H P+ L +K E +
Sbjct: 206 ALRGEI--TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
K+ D + A + + CL + +KRP +K+ +
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
+VAIK I + S+ E + + HPNI+ + L+++M +S G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS---DSDGSVKLA 170
I+ F E + ++ + L A+ YLH+ G +HRD+K N+L D D + ++
Sbjct: 105 DRIVEKGF---YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S + +P GS + T GTP ++APEV+ + YS D WS G+ A L
Sbjct: 162 DFGLS-KMEDP------GSVLST-ACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILL 212
Query: 231 HGRPPLSHLPPEKSLLMKMTQRFRF-SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP K + + F S Y + S + KD + +++DP K
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI---------SDSAKDFIRHLMEKDPEK 263
Query: 290 RPSAEKLMKHSFF 302
R + E+ ++H +
Sbjct: 264 RFTCEQALQHPWI 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 20 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 74
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+S +L +V + SL + + + I I ++T + YLH + +HRD
Sbjct: 75 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA-RQTARGMDYLHAKSIIHRD 133
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTG- 212
+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 213 -YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKDKNKK 270
YSF++D+++FGI EL G+ P S++ + +++M R S D K
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIEMVGRGSLSPDLSKV------RSN 241
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ K ++A CL + +RPS +++
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 42 RIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 96
Query: 93 CSFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQG 148
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 97 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKS 151
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIR 206
Query: 209 SH--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV----- 261
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 262 -RSNCPKAMKRLMAECLKKKRDERP 285
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 43 RIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 97
Query: 93 CSFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQG 148
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKS 152
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIR 207
Query: 209 SH--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV----- 262
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 263 -RSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 57 AIKAIDLDQSRT-DLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-Q 114
A+K I+ ++ D +I RE + + L HPNI+ S ++V + G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 115 SIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLAD 171
II E A ++K+ S ++Y+H +HRD+K NIL +S D +K+ D
Sbjct: 111 EIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
FG+S + + + D GT Y++APEV+R Y K D+WS G+ L
Sbjct: 168 FGLSTCFQQ--------NTKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLS 217
Query: 232 GRPPLSHLPPEKSLLMKM-TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
G PP + E +L ++ T ++ F D + I D KD++ L PS R
Sbjct: 218 GTPPF-YGKNEYDILKRVETGKYAF-DLPQWRTISDDA-------KDLIRKMLTFHPSLR 268
Query: 291 PSAEKLMKHSFFK 303
+A + ++H + +
Sbjct: 269 ITATQCLEHPWIQ 281
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 32 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 86
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+S +L +V + SL + + + I I ++T + YLH + +HRD
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA-RQTARGMDYLHAKSIIHRD 145
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTG- 212
+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWS-----GSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 213 -YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKDKNKK 270
YSF++D+++FGI EL G+ P S++ + +++M R S D K
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIEMVGRGSLSPDLSKV------RSN 253
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ K ++A CL + +RPS +++
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 25/276 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPM--DSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
Y L +IG G KAI + D IK I++ + S + + RRE ++ + H
Sbjct: 26 YVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ SF + L++VM + G L I++ E I + AL ++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
++ LHRD+K+ NI DG+V+L DFG++ + + + GTPY+++PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-------NSTVELARACIGTPYYLSPE 195
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + Y+ K+DIW+ G EL + K+L++K+ +
Sbjct: 196 ICENKP-YNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKII----------SGSFP 243
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ +S + +V+ ++P RPS +++ F
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGF 279
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 16 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 94 SFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGH 149
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKSI 125
Query: 150 LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----GSHQFEQLSGSILWMAPEVIRM 180
Query: 210 H--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV------ 234
Query: 268 NKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERP 258
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 112
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-------GISDGATMKXF 165
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 166 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 225 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYA 123
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 237
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 285
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E++ + HP + +F RL VM + + G L +S E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGA 112
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
E +SAL YLH++ ++RD+K N++ D DG +K+ DFG+ A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-------GISDGATMKXF 165
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APEV+ + Y D W G+ E+ GR P + E+ + + + RF
Sbjct: 166 CGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR----PS-AEKLMKHSFFKNCN 306
+ S K ++A L +DP +R PS A+++M+H FF + N
Sbjct: 225 P------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 121/241 (50%), Gaps = 29/241 (12%)
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL--QSIISSCFPDGLP 126
D+D ++E + M L HPNI+ + +F ++ +++VM + G L + + F
Sbjct: 66 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF----R 121
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGN--ILSDS-DGSVKLADFGVSASIYEPSH 183
E A ++K+ LSA++Y H HRD+K N L+DS D +KL DFG++A ++P
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR-FKPGK 180
Query: 184 HHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEK 243
M+ GTPY+++P+V+ Y + D WS G+ L G PP S P +
Sbjct: 181 -------MMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSA-PTDX 230
Query: 244 SLLMKMTQRFRFSDYEKTLKIKDKNK-KFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+++K+ E T +K+ S + ++ L + P +R ++ + ++H +F
Sbjct: 231 EVMLKIR--------EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
Query: 303 K 303
+
Sbjct: 283 E 283
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 26/253 (10%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
+VAIK I S+ E + + HPNI+ + L+++M +S G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS---DSDGSVKLA 170
I+ F E + ++ + L A+ YLH+ G +HRD+K N+L D D + ++
Sbjct: 105 DRIVEKGF---YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+S + +P GS + T GTP ++APEV+ + YS D WS G+ A L
Sbjct: 162 DFGLS-KMEDP------GSVLST-ACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILL 212
Query: 231 HGRPPLSHLPPEKSLLMKMTQRFRF-SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP K + + F S Y + S + KD + +++DP K
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI---------SDSAKDFIRHLMEKDPEK 263
Query: 290 RPSAEKLMKHSFF 302
R + E+ ++H +
Sbjct: 264 RFTCEQALQHPWI 276
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 31/281 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT--DLDSIRRETKTMSLLSHP 86
Y + D +GVG V K + VA+K ++ + R+ + I+RE + + L HP
Sbjct: 13 YVLGDTLGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
+I+ + S + ++VM ++S G L I C + E + ++ LSA+ Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
+HRD+K N+L D+ + K+ADFG+S + + + G+P + APEV
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--------GEFLRTSCGSPNYAAPEV 181
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLS--HLPPEKSLLMKMTQR-FRFSDYEKTLK 263
I + DIWS G+ L G P H+P +L K+ F +Y
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLFKKIRGGVFYIPEY----- 233
Query: 264 IKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+R+ ++ L DP KR + + + +H +FK
Sbjct: 234 -------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 20 RIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 74
Query: 93 CSFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQG 148
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKS 129
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIR 184
Query: 209 SH--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV----- 239
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 240 -RSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 29/242 (11%)
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL--QSIISSCFPDGLP 126
D+D ++E + M L HPNI+ + +F ++ +++VM + G L + + F
Sbjct: 49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF----R 104
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGN--ILSDS-DGSVKLADFGVSASIYEPSH 183
E A ++K+ LSA++Y H HRD+K N L+DS D +KL DFG++A ++P
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR-FKPGK 163
Query: 184 HHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEK 243
M+ GTPY+++P+V+ Y + D WS G+ L G PP S P +
Sbjct: 164 -------MMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSA-PTDX 213
Query: 244 SLLMKMTQRFRFSDYEKTLKIKDKNK-KFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+++K+ E T +K+ S + ++ L + P +R ++ + ++H +F
Sbjct: 214 EVMLKIR--------EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
Query: 303 KN 304
+
Sbjct: 266 EK 267
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 37/267 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 42 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 109 SCGSLQSIISSCFPDGLPEPC---------------IAIVLKETLSALSYLHNQGHLHRD 153
S G+L+ + + P GL E C + + + YL ++ +HRD
Sbjct: 102 SKGNLREYLQARRPPGL-EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD 160
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N+L D +K+ADFG++ I HH T+ WMAPE + Y
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-Y 214
Query: 214 SFKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKF 271
+ ++D+WSFG+ E+ G P +P E+ L+K R DK
Sbjct: 215 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNC 262
Query: 272 SRAFKDMVASCLDQDPSKRPSAEKLMK 298
+ M+ C PS+RP+ ++L++
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 41/302 (13%)
Query: 19 KIQYPLDPSSY-KILDEIGVGVSAIVYKAICI----PMDSTVVAIKAIDLDQSRTDLDSI 73
K ++P D + K L E G ++ +A+ I P ++ VA+K + D + DL +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFG-QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDL 87
Query: 74 RRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPE----- 127
E + M ++ H NI+N + + D L+V++ + S G+L+ + + P G+
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 128 --PCIAIVLKETLS-------ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
P + K+ +S + YL +Q +HRD+ A N+L + +K+ADFG++ I
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLS 237
++ + + WMAPE + Y+ ++D+WSFG+ E+ G P
Sbjct: 208 NNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 238 HLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
+P E+ L+K R DK + M+ C PS+RP+ ++L
Sbjct: 262 GIPVEELFKLLKEGHRM------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 297 MK 298
++
Sbjct: 310 VE 311
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 17 RIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 71
Query: 93 CSFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQG 148
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKS 126
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIR 181
Query: 209 SH--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV----- 236
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 237 -RSNCPKAMKRLMAECLKKKRDERP 260
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +M G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +K+ADFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +M G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +K+ADFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYA 123
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 237
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 285
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 51 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 110
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 111 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 170
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 224
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 272
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 273 NELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 53 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 112
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 113 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 172
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 226
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 274
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 275 NELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 16 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 94 SFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGH 149
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKSI 125
Query: 150 LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIRM 180
Query: 210 H--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV------ 234
Query: 268 NKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERP 258
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 56 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 115
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 116 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 175
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 229
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 277
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 278 NELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 21 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 75
Query: 94 SFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGH 149
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKSI 130
Query: 150 LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIRM 185
Query: 210 H--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV------ 239
Query: 268 NKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 37/267 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 109 SCGSLQSIISSCFPDGLPEPC---------------IAIVLKETLSALSYLHNQGHLHRD 153
S G+L+ + + P GL E C + + + YL ++ +HRD
Sbjct: 117 SKGNLREYLQARRPPGL-EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD 175
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N+L D +K+ADFG++ I HH T+ WMAPE + Y
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-Y 229
Query: 214 SFKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKF 271
+ ++D+WSFG+ E+ G P +P E+ L+K R DK
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNC 277
Query: 272 SRAFKDMVASCLDQDPSKRPSAEKLMK 298
+ M+ C PS+RP+ ++L++
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 217
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-YT 271
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 272 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 319
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 320 NELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 46 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 165
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-YT 219
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 220 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 267
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 268 NELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 26/253 (10%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL- 113
+ A+K I + SI E + + H NI+ + + L++VM +S G L
Sbjct: 49 LFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELF 108
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL---SDSDGSVKLA 170
I+ F E + ++++ L A+ YLH G +HRD+K N+L D + + ++
Sbjct: 109 DRIVEKGF---YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMIS 165
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+ S G M T GTP ++APEV+ + YS D WS G+ A L
Sbjct: 166 DFGL-------SKMEGKGDVMST-ACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILL 216
Query: 231 HGRPPLSHLPPEKSLLMKMTQRFRF-SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
G PP K + + F S Y + S + KD + + +++DP+K
Sbjct: 217 CGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI---------SDSAKDFIRNLMEKDPNK 267
Query: 290 RPSAEKLMKHSFF 302
R + E+ +H +
Sbjct: 268 RYTCEQAARHPWI 280
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 23/276 (8%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIK--AIDLDQSRTDL-DSIRRETKTMSLLSHPNIL 89
+++G G +VYK +++T VA+K A +D + +L +E K M+ H N++
Sbjct: 31 NKMGEGGFGVVYKGY---VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 90 NAHCSFSVDSR-LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI---VLKETLSALSYLH 145
FS D L +V +M GSL +S C DG P + + + + +++LH
Sbjct: 88 EL-LGFSSDGDDLCLVYVYMPNGSLLDRLS-CL-DGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
H+HRD+K+ NIL D + K++DFG++ + + + M + GT +MAPE
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-----XVMXXRIVGTTAYMAPE 199
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLS-HLPPEKSLLMKMTQRFRFSDYEKTL-- 262
+R + K+DI+SFG+ LE+ G P + H P+ L +K E +
Sbjct: 200 ALRGEI--TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 257
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
K+ D + A + + CL + +KRP +K+ +
Sbjct: 258 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 37/277 (13%)
Query: 31 ILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN 90
I ++IG G V++A D V + D R ++ RE M L HPNI+
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAER--VNEFLREVAIMKRLRHPNIVL 98
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSII-SSCFPDGLPEPCIAIVLKETLSALSYLHNQGH 149
+ + L +V ++S GSL ++ S + L E + + ++YLHN+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 150 --LHRDVKAGNILSDSDGSVKLADFGVS---ASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
+HR++K+ N+L D +VK+ DFG+S AS + S AGTP WMAP
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK----------SAAGTPEWMAP 208
Query: 205 EVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKI 264
EV+R K+D++SFG+ ELA + P +L P + + +
Sbjct: 209 EVLRDEPSNE-KSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGF 253
Query: 265 KDKNKKFSRAFKDMVAS----CLDQDPSKRPSAEKLM 297
K K + R VA+ C +P KRPS +M
Sbjct: 254 KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 20 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + ++++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 189
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 232
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 117 SKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDI-----HHIDXXKKTTNGRLPVKWMAPEALFDRI-YT 230
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 278
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 49 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 168
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-YT 222
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 223 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 270
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 271 NELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 20 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + ++++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 189
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 232
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 25/279 (8%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y++ +E+G G ++V + + + A+ S D + RE + LL HPNI
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSL-QSIIS-SCFPDGLPEPCIAIVLKETLSALSYLHN 146
+ H S S + +++ ++ G L + I++ + + CI ++ L A+ + H
Sbjct: 73 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI----QQILEAVLHCHQ 128
Query: 147 QGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
G +HR++K N+L S +VKLADFG++ + E G AGTP +++
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG------FAGTPGYLS 181
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLK 263
PEV+R Y D+W+ G+ L G PP ++ Q+ + Y+
Sbjct: 182 PEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQH-----RLYQQIKAGAYDFPSP 235
Query: 264 IKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
D + KD++ L +PSKR +A + +KH +
Sbjct: 236 EWD---TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 50 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 169
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-YT 223
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 224 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 271
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 272 NELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-YT 230
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 278
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHC 93
IG G VYK VA+K +++ + L + + E + H NIL
Sbjct: 16 IGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 94 SFSVDSRLWVVMPFMSCGSLQS---IISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGH 149
+S +L +V + SL II + F E I + ++T + YLH +
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIETKF-----EMIKLIDIARQTAQGMDYLHAKSI 125
Query: 150 LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
+HRD+K+ NI D +VK+ DFG++ S GS ++G+ WMAPEVIR
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVIRM 180
Query: 210 H--TGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
YSF++D+++FGI EL G+ P S++ ++ + + + D K
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV------ 234
Query: 268 NKKFSRAFKDMVASCLDQDPSKRP 291
+A K ++A CL + +RP
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 18 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + + H G+ W APE + ++ +
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK------WTAPESL-AYNKF 187
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + P + + EK +++
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV----------YELLEKDYRMERPEGCPE 237
Query: 273 RAFKDMVASCLDQDPSKRPS 292
+ + +++ +C +PS RPS
Sbjct: 238 KVY-ELMRACWQWNPSDRPS 256
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE MS L HP + + +F D +L+ + + G L I E C
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRF 139
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
E +SAL YLH +G +HRD+K NIL + D +++ DFG +A + P + +
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFV 198
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
GT +++PE++ + +D+W+ G +L G PP
Sbjct: 199 ----GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVAGLPP----------------- 236
Query: 253 FRFSD----YEKTLKIK-DKNKKFSRAFKDMVASCLDQDPSKRPSAEK------LMKHSF 301
FR + ++K +K++ D F +D+V L D +KR E+ L H F
Sbjct: 237 FRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 296
Query: 302 FKNCN 306
F++
Sbjct: 297 FESVT 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P T VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 109 SCGSLQSIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDV 154
S G+L+ + + P GL PE ++ + + YL ++ +HRD+
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L D +K+ADFG++ I HH T+ WMAPE + Y+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRI-YT 230
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM------------DKPSNCT 278
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 22/260 (8%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 18 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + ++++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + + H G+ W APE + ++ +
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK------WTAPESL-AYNKF 187
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + P + + EK +++
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV----------YELLEKDYRMERPEGCPE 237
Query: 273 RAFKDMVASCLDQDPSKRPS 292
+ + +++ +C +PS RPS
Sbjct: 238 KVY-ELMRACWQWNPSDRPS 256
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 110 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 283
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 331
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 332 NELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+N + + D L+V++ +
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +++ADFG++ I ++ + + WMAPE + Y+
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 237
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 285
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 50/312 (16%)
Query: 14 GTIAQKIQYPLDPSSY-----KILDEIGVG----VSAIVYKAICIPMDST--VVAIKAID 62
G + Q P DP+ + K + ++G G VS Y D T +VA+KA+
Sbjct: 13 GALEVLFQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPT---NDGTGEMVAVKALK 69
Query: 63 LDQSRTDLDSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSC 120
D ++E + L H +I+ C + + L +VM ++ GSL+
Sbjct: 70 ADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR------ 123
Query: 121 FPDGLPEPCIAIV-----LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
D LP I + ++ ++YLH Q ++HRD+ A N+L D+D VK+ DFG++
Sbjct: 124 --DYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPP 235
++ E H + D +W APE ++ + Y + +D+WSFG+T EL
Sbjct: 182 KAVPE----GHEXYRVREDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYEL------ 230
Query: 236 LSHL-----PPEKSL-LMKMTQR----FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQ 285
L+H PP K L L+ + Q R ++ + + + K ++ +C +
Sbjct: 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWET 290
Query: 286 DPSKRPSAEKLM 297
+ S RP+ E L+
Sbjct: 291 EASFRPTFENLI 302
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 18 KLGGGQFGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + + H G+ W APE + ++ +
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK------WTAPESL-AYNKF 187
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + P + + EK +++
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV----------YELLEKDYRMERPEGCPE 237
Query: 273 RAFKDMVASCLDQDPSKRPS 292
+ + +++ +C +PS RPS
Sbjct: 238 KVY-ELMRACWQWNPSDRPS 256
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD--GLPEPCIAIV 133
E K ++ + I++ +F + L +VM M+ G ++ I + D G EP
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
+ +S L +LH + ++RD+K N+L D DG+V+++D G++ + G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
AGTP +MAPE++ Y F D ++ G+T E+ R P EK ++ QR
Sbjct: 348 GYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF-RARGEKVENKELKQRV 405
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKN 304
E+ + D KFS A KD + L +DP KR S + L H F++
Sbjct: 406 ----LEQAVTYPD---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 20 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 189
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 232
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 33 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 202
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 245
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 246 RPEGCPEKVYELMRACWQWNPSDRPS 271
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD--GLPEPCIAIV 133
E K ++ + I++ +F + L +VM M+ G ++ I + D G EP
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
+ +S L +LH + ++RD+K N+L D DG+V+++D G++ + G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
AGTP +MAPE++ Y F D ++ G+T E+ R P EK ++ QR
Sbjct: 348 GYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF-RARGEKVENKELKQRV 405
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKN 304
E+ + D KFS A KD + L +DP KR S + L H F++
Sbjct: 406 ----LEQAVTYPD---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 25 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + ++++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 194
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 237
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD--GLPEPCIAIV 133
E K ++ + I++ +F + L +VM M+ G ++ I + D G EP
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
+ +S L +LH + ++RD+K N+L D DG+V+++D G++ + G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
AGTP +MAPE++ Y F D ++ G+T E+ R P EK ++ QR
Sbjct: 348 GYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF-RARGEKVENKELKQRV 405
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKN 304
E+ + D KFS A KD + L +DP KR S + L H F++
Sbjct: 406 ----LEQAVTYPD---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 22 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 191
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 234
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPS 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 20 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 189
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 232
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 25 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 194
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 237
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 11/211 (5%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
S +K L+++G G A VYK + VA+K + LD + RE M L H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLN-KTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF---PDGLPEPCIAIVLKETLSALSY 143
NI+ + +++L +V FM + + S P GL + + L L++
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
H LHRD+K N+L + G +KL DFG++ + P + + T ++ A
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-------TFSSEVVTLWYRA 176
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP 234
P+V+ YS DIWS G E+ G+P
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKP 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 36/317 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHP 86
Y++ +E+G G ++V + C+ T A K I+ + S D + RE + LL HP
Sbjct: 33 YQLFEELGKGAFSVVRR--CVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSL-QSIIS-SCFPDGLPEPCIAIVLKETLSALSYL 144
NI+ H S S + ++V ++ G L + I++ + + CI + L +++++
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI----HQILESVNHI 146
Query: 145 HNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
H +HRD+K N+L S +VKLADFG++ + + G AGTP +
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFG------FAGTPGY 199
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
++PEV+R Y DIW+ G+ L G PP K+ Q+ + Y+
Sbjct: 200 LSPEVLRKDP-YGKPVDIWACGVILYILLVGYPPFWDEDQH-----KLYQQIKAGAYDFP 253
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVKNVLHGLR 321
D + K+++ L +P+KR +A++ +KH + C + V +++H
Sbjct: 254 SPEWD---TVTPEAKNLINQMLTINPAKRITADQALKHPWV--CQRST---VASMMHRQE 305
Query: 322 SVE--ERFKESRNHVGA 336
+VE +F R GA
Sbjct: 306 TVECLRKFNARRKLKGA 322
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD--GLPEPCIAIV 133
E K ++ + I++ +F + L +VM M+ G ++ I + D G EP
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
+ +S L +LH + ++RD+K N+L D DG+V+++D G++ + G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
AGTP +MAPE++ Y F D ++ G+T E+ R P EK ++ QR
Sbjct: 348 GYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF-RARGEKVENKELKQRV 405
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKN 304
E+ + D KFS A KD + L +DP KR S + L H F++
Sbjct: 406 ----LEQAVTYPD---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 41/302 (13%)
Query: 19 KIQYPLDPSSY-KILDEIGVGVSAIVYKAICI----PMDSTVVAIKAIDLDQSRTDLDSI 73
K ++P D + K L E G ++ +A+ I P ++ VA+K + D + DL +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFG-QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 74 RRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPE----- 127
E + M ++ H NI+N + + D L+V++ + S G+L+ + + P G+
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDIN 147
Query: 128 --PCIAIVLKETLS-------ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
P + K+ +S + YL +Q +HRD+ A N+L + +K+ADFG++ I
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLS 237
++ T+ WMAPE + Y+ ++D+WSFG+ E+ G P
Sbjct: 208 -----NNIDXXKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 238 HLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
+P E+ L+K R DK + M+ C PS+RP+ ++L
Sbjct: 262 GIPVEELFKLLKEGHRM------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 297 MK 298
++
Sbjct: 310 VE 311
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +K+ADFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 22 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 191
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 234
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPS 260
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDS-TVVAIKAIDLDQSRTD----LDSIRRETKTMSLL 83
Y++ + IG G ++V + CI ++ A+K +D+ + + + ++RE +L
Sbjct: 26 YELCEVIGKGAFSVVRR--CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGL--PEPCIAIVLKETLSAL 141
HP+I+ ++S D L++V FM L I G E + +++ L AL
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 142 SYLHNQGHLHRDVKAGNIL---SDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT-DMAG 197
Y H+ +HRDVK N+L ++ VKL DFGV+ + E S ++ G
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE--------SGLVAGGRVG 195
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP++MAPEV++ Y D+W G+ L G P +R
Sbjct: 196 TPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLP----------FYGTKERL---- 240
Query: 258 YEKTLKIKDKNKK-----FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+E +K K K S + KD+V L DP++R + + + H + K
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 25 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 194
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 237
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 20 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 189
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 232
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I H +F ++ L++VM + G L +++S F D LPE + E + A+ +H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSK-FEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
++HRD+K N+L D +G ++LADFG + + G+ + GTP +++PE++
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKM------NDDGTVQSSVAVGTPDYISPEIL 264
Query: 208 RSHTG----YSFKADIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQRFRFSDYEKT 261
++ Y + D WS G+ E+ +G P L +M +RF+F +
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD 324
Query: 262 LKIKDKNKKFSRAFKDMVAS--CLDQDPSKRPSAEKLMKHSFFKNCN 306
+ S KD++ C + + E KH+FF+ N
Sbjct: 325 V---------SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLN 362
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 41/302 (13%)
Query: 19 KIQYPLDPSSY-KILDEIGVGVSAIVYKAICI----PMDSTVVAIKAIDLDQSRTDLDSI 73
K ++P D + K L E G ++ +A+ I P ++ VA+K + D + DL +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFG-QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 74 RRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPE----- 127
E + M ++ H NI+N + + D L+V++ + S G+L+ + + P G+
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 128 --PCIAIVLKETLS-------ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
P + K+ +S + YL +Q +HRD+ A N+L + +K+ADFG++ I
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLS 237
++ T+ WMAPE + Y+ ++D+WSFG+ E+ G P
Sbjct: 208 -----NNIDXXKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 238 HLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
+P E+ L+K R DK + M+ C PS+RP+ ++L
Sbjct: 262 GIPVEELFKLLKEGHRM------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 297 MK 298
++
Sbjct: 310 VE 311
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 24 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 193
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 236
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 237 RPEGCPEKVYELMRACWQWNPSDRPS 262
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 24/273 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y++L IG G A V A I + VA+K ID Q + + L + RE + +L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHI-LTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
PNI+ + L++V + S G + + + E ++ +SA+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH--GRXKEKEARAKFRQIVSAVQYCH 130
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ +HRD+KA N+L D+D ++K+ADFG S+ G+ + G P + APE
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGF-------SNEFTFGNKL-DAFCGAPPYAAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ + + D+WS G+ L G P ++ + ++R Y T
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXST---- 238
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
++++ L +PSKR + E++ K
Sbjct: 239 --------DCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 21 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + ++++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + + H G+ W APE + ++ +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK------WTAPESL-AYNKF 190
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 233
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 234 RPEGCPEKVYELMRACWQWNPSDRPS 259
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 25 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 194
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 237
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 126/280 (45%), Gaps = 46/280 (16%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAI----DLDQSRTDLDSIRRETKTMSLLSHPNILN 90
IG+G VY+A I VA+KA D D S+T ++++R+E K ++L HPNI+
Sbjct: 15 IGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQT-IENVRQEAKLFAMLKHPNIIA 70
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISS--CFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ L +VM F G L ++S PD L + I ++YLH++
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA-----RGMNYLHDEA 125
Query: 149 ---HLHRDVKAGNIL--------SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
+HRD+K+ NIL S+ +K+ DFG+ + H + M AG
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL-------AREWHRTTKM--SAAG 176
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPEVIR+ +S +D+WS+G+ EL G P + + + +
Sbjct: 177 AYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGID-------GLAVAYGVAM 228
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ L I + F ++ C + DP RPS ++
Sbjct: 229 NKLALPIPSTCPE---PFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
I H +F ++ L++VM + G L +++S F D LPE + E + A+ +H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSK-FEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
++HRD+K N+L D +G ++LADFG + + G+ + GTP +++PE++
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKM------NDDGTVQSSVAVGTPDYISPEIL 248
Query: 208 RSHTG----YSFKADIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQRFRFSDYEKT 261
++ Y + D WS G+ E+ +G P L +M +RF+F +
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD 308
Query: 262 LKIKDKNKKFSRAFKDMVAS--CLDQDPSKRPSAEKLMKHSFFKNCN 306
+ S KD++ C + + E KH+FF+ N
Sbjct: 309 V---------SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLN 346
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+AGTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLAGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 30/257 (11%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGS 112
+VA+KA+ D ++E + L H +I+ C + L +VM ++ GS
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L+ + GL + + + ++ ++YLH+Q ++HR++ A N+L D+D VK+ DF
Sbjct: 105 LRDYLPR-HSIGLAQ--LLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTP-YWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
G++ ++ P H ++ + + +P +W APE ++ + Y + +D+WSFG+T EL
Sbjct: 162 GLAKAV--PEGHEYY---RVREDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYEL-- 213
Query: 232 GRPPLSHL-----PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK------DMVA 280
L+H PP K L + + + + T ++ ++ ++ R K ++
Sbjct: 214 ----LTHCDSSQSPPTKFLELIGIAQGQMTVLRLT-ELLERGERLPRPDKCPCEVYHLMK 268
Query: 281 SCLDQDPSKRPSAEKLM 297
+C + + S RP+ E L+
Sbjct: 269 NCWETEASFRPTFENLI 285
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 20 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 189
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 232
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI+ + + D L+V++ +
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYA 123
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 237
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 285
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLS- 84
S Y+ + EIGVG VYKA P VA+K++ + L S RE + L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 85 --HPNILNAH--CSFS-VDSRLWVVMPFMSCGS-LQSIISSCFPDGLPEPCIAIVLKETL 138
HPN++ C+ S D + V + F L++ + P GLP I ++++ L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
L +LH +HRD+K NIL S G+VKLADFG+ A IY S+ ++T
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL-ARIY--SYQMALAPVVVTL---- 175
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
++ APEV+ T Y+ D+WS G E+ +P
Sbjct: 176 -WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKP 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 50 PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFM 108
P ++ VA+K + D + DL + E + M ++ H NI++ + + D L+V++ +
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYA 123
Query: 109 SCGSLQSIISSCFPDGLPE-------PCIAIVLKETLS-------ALSYLHNQGHLHRDV 154
S G+L+ + + P G+ P + K+ +S + YL +Q +HRD+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 155 KAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
A N+L + +K+ADFG++ I ++ + + WMAPE + Y+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-----PVKWMAPEALFDRV-YT 237
Query: 215 FKADIWSFGITALEL-AHGRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNKKFS 272
++D+WSFG+ E+ G P +P E+ L+K R DK +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------DKPANCT 285
Query: 273 RAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C PS+RP+ ++L++
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y + +E+G G ++V + C+ + + A K I+ + S D + RE + L H
Sbjct: 30 NYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
PNI+ H S +S ++V ++ G L + I++ F E + +++ L +++Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 144
Query: 145 HNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
H+ G +HR++K N+L S +VKLADFG++ + + H AGTP +
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFAGTPGY 196
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
++PEV++ YS DIW+ G+ L G PP
Sbjct: 197 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 30/257 (11%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGS 112
+VA+KA+ D ++E + L H +I+ C + L +VM ++ GS
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L+ + GL + + + ++ ++YLH Q ++HR++ A N+L D+D VK+ DF
Sbjct: 105 LRDYLPR-HSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTP-YWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
G++ ++ P H ++ + + +P +W APE ++ + Y + +D+WSFG+T EL
Sbjct: 162 GLAKAV--PEGHEYY---RVREDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYEL-- 213
Query: 232 GRPPLSHL-----PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK------DMVA 280
L+H PP K L + + + + T ++ ++ ++ R K ++
Sbjct: 214 ----LTHCDSSQSPPTKFLELIGIAQGQMTVLRLT-ELLERGERLPRPDKCPCEVYHLMK 268
Query: 281 SCLDQDPSKRPSAEKLM 297
+C + + S RP+ E L+
Sbjct: 269 NCWETEASFRPTFENLI 285
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 36/317 (11%)
Query: 29 YKILDEIGVGVSAIVYKAI--CIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
Y++ ++IG G ++V + + C + I L S D + RE + LL H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL--SARDHQKLEREARICRLLKHS 63
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSL-QSIIS-SCFPDGLPEPCIAIVLKETLSALSYL 144
NI+ H S S + ++V ++ G L + I++ + + CI ++ L A+ +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI----QQILEAVLHC 119
Query: 145 HNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
H G +HRD+K N+L S +VKLADFG++ + AGTP +
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-------QGDQQAWFGFAGTPGY 172
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
++PEV+R Y DIW+ G+ L G PP K+ Q+ + Y+
Sbjct: 173 LSPEVLRKE-AYGKPVDIWACGVILYILLVGYPPFWDEDQH-----KLYQQIKAGAYDFP 226
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVKNVLHGLR 321
D + K+++ L +P+KR +A + +KH + C + V +++H
Sbjct: 227 SPEWD---TVTPEAKNLINQMLTINPAKRITAHEALKHPWV--CQRST---VASMMHRQE 278
Query: 322 SVE--ERFKESRNHVGA 336
+VE ++F R GA
Sbjct: 279 TVECLKKFNARRKLKGA 295
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 257 DIKKDRWYNKPLKKGAK 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 26/255 (10%)
Query: 51 MDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSC 110
+ + A+K I + D S+ E + + H NI+ + + ++VM +S
Sbjct: 32 LTGKLFALKCIKKSPAFRD-SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSG 90
Query: 111 GSLQSIISSCFPDGL-PEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS---DSDGS 166
G L G+ E ++V+++ LSA+ YLH G +HRD+K N+L + +
Sbjct: 91 GEL---FDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSK 147
Query: 167 VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITA 226
+ + DFG+S + +++ GTP ++APEV+ + YS D WS G+
Sbjct: 148 IMITDFGLSKM---------EQNGIMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIT 197
Query: 227 LELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQD 286
L G PP + E L K+ + + YE D S + KD + L++D
Sbjct: 198 YILLCGYPPF-YEETESKLFEKIKEGY----YEFESPFWD---DISESAKDFICHLLEKD 249
Query: 287 PSKRPSAEKLMKHSF 301
P++R + EK + H +
Sbjct: 250 PNERYTCEKALSHPW 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 257 DIKKDRWYNKPLKKGAK 273
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCI 130
++ E + + L+HP I+ F + ++V+ M G L ++ + L E
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGN---KRLKEATC 116
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHH 187
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----- 171
Query: 188 GSAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSL 245
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 172 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 246 LMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 229 KDQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)
Query: 75 RETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVL 134
+E K M L HPN+L D RL + ++ G+L+ II S P
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFA 114
Query: 135 KETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS-------------ASIYEP 181
K+ S ++YLH+ +HRD+ + N L + +V +ADFG++ S+ +P
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174
Query: 182 SHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL---AHGRPPLSH 238
+ + G PYWMAPE+I + Y K D++SFGI E+ + P +
Sbjct: 175 DRKKRY------TVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADP--DY 225
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
LP +++ + R Y +F + C D DP KRPS KL
Sbjct: 226 LP--RTMDFGLNVRGFLDRYCPP--------NCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCI 130
++ E + + L+HP I+ F + ++V+ M G L ++ + L E
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGN---KRLKEATC 115
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHH 187
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 116 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----- 170
Query: 188 GSAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSL 245
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 171 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 227
Query: 246 LMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 228 KDQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVA--IKAIDLDQSRTDL--DSIRRETKTMSLLS 84
Y++ +E+G G AIV K A IK L SR + + I RE + +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ H F + + +++ +S G L ++ + L E LK+ L + YL
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYL 124
Query: 145 HNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
H++ H D+K NI+ + + +KL DFG++ H ++ GTP
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--------HKIEAGNEFKNIFGTPE 176
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
++APE++ ++ +AD+WS G+ L G P +++L + F +
Sbjct: 177 FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE--- 232
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
+ S KD + L +DP +R + + ++HS+ K +
Sbjct: 233 -----EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 258 DIKKDRWYNKPLKKGAK 274
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCI 130
++ E + + L+HP I+ F + ++V+ M G L ++ + L E
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGN---KRLKEATC 116
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHH 187
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----- 171
Query: 188 GSAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSL 245
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 172 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 246 LMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 229 KDQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLS- 84
S Y+ + EIGVG VYKA P VA+K++ + L S RE + L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 85 --HPNILNAH--CSFS-VDSRLWVVMPFMSCGS-LQSIISSCFPDGLPEPCIAIVLKETL 138
HPN++ C+ S D + V + F L++ + P GLP I ++++ L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
L +LH +HRD+K NIL S G+VKLADFG+ A IY S+ ++T
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL-ARIY--SYQMALDPVVVTL---- 175
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
++ APEV+ T Y+ D+WS G E+ +P
Sbjct: 176 -WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKP 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCI 130
++ E + + L+HP I+ F + ++V+ M G L ++ + L E
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGN---KRLKEATC 116
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHH 187
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----- 171
Query: 188 GSAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSL 245
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 172 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 246 LMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 229 KDQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E ++L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 258 DIKKDRWY 265
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCI 130
++ E + + L+HP I+ F + ++V+ M G L ++ + L E
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGN---KRLKEATC 122
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHH 187
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 123 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----- 177
Query: 188 GSAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSL 245
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 178 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 234
Query: 246 LMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 235 KDQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 25 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + + H G+ W APE + ++ +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK------WTAPESL-AYNKF 194
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 237
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K + D +++ +E M + HPN++
Sbjct: 224 KLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HR+
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 393
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 436
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 437 RPEGCPEKVYELMRACWQWNPSDRPS 462
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIA 131
++ E + + L+HP I+ F + ++V+ M G L + L E
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG--NKRLKEATCK 256
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHHG 188
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 257 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------ 310
Query: 189 SAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL 246
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 311 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 368
Query: 247 MKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 369 DQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 136/284 (47%), Gaps = 20/284 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
+ ++ +G G + V A+ + VA+K +D+ ++ ++I++E +L+H N+
Sbjct: 8 WDLVQTLGEGAAGEVQLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-GLPEPCIAIVLKETLSALSYLHNQ 147
+ + + ++ + + S G L I PD G+PEP + ++ + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
G HRD+K N+L D ++K++DFG+ A+++ +++ ++ M GT ++APE++
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGL-ATVF----RYNNRERLLNKMCGTLPYVAPELL 178
Query: 208 RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
+ ++ D+WS GI + G P P S +SD+++ +
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQ--PSDSCQ-------EYSDWKEKKTYLNP 229
Query: 268 NKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF-KNCNKGVE 310
KK A ++ L ++PS R + + K ++ K KG +
Sbjct: 230 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIA 131
++ E + + L+HP I+ F + ++V+ M G L + L E
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG--NKRLKEATCK 242
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIYEPSHHHHHG 188
+ + L A+ YLH G +HRD+K N+L S D +K+ DFG S + E S
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------ 296
Query: 189 SAMITDMAGTPYWMAPEVIRS--HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL 246
++ + GTP ++APEV+ S GY+ D WS G+ G PP S + SL
Sbjct: 297 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 354
Query: 247 MKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++T ++ F I + + S D+V L DP R + E+ ++H + ++
Sbjct: 355 DQITSGKYNF--------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 257 DIKKDRWY 264
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLS- 84
S Y+ + EIGVG VYKA P VA+K++ + L S RE + L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 85 --HPNILNAH--CSFS-VDSRLWVVMPFMSCGS-LQSIISSCFPDGLPEPCIAIVLKETL 138
HPN++ C+ S D + V + F L++ + P GLP I ++++ L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
L +LH +HRD+K NIL S G+VKLADFG+ A IY S+ ++T
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL-ARIY--SYQMALFPVVVTL---- 175
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
++ APEV+ T Y+ D+WS G E+ +P
Sbjct: 176 -WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKP 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 258 DIKKDRWYNKPLKKGAK 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 93 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 149
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 150 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 205 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 255
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 256 DIKKDRWYNKPLKKGAK 272
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 258 DIKKDRWYNKPLKKGAK 274
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 258 DIKKDRWYNKPLKKGAK 274
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 257 DIKKDRWYNKPLKKGAK 273
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 258 DIKKDRWYNKPLKKGAK 274
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 257 DIKKDRWY 264
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLXGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 257 DIKKDRWY 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 257 DIKKDRWY 264
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSXQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 257 DIKKDRWYNKPLKKGAK 273
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 36/303 (11%)
Query: 11 SSTGTIAQKIQYPLDPSS-------YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDL 63
++ GT + Y +D S+ +++ E+G G ++IVY+ A+ +
Sbjct: 30 AAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRC----KQKGTQKPYALKV 85
Query: 64 DQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFP 122
+ D +R E + LSHPNI+ F + + +V+ ++ G L I+ +
Sbjct: 86 LKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY- 144
Query: 123 DGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS---DGSVKLADFGVSASIY 179
E A +K+ L A++YLH G +HRD+K N+L + D +K+ADFG+S +
Sbjct: 145 --YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV- 201
Query: 180 EPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHL 239
H M T + GTP + APE++R Y + D+WS GI L G P
Sbjct: 202 ------EHQVLMKT-VCGTPGYCAPEILRG-CAYGPEVDMWSVGIITYILLCGFEPFYDE 253
Query: 240 PPEKSLLMKMTQ-RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
++ + ++ + F I + S KD+V + DP KR + + ++
Sbjct: 254 RGDQFMFRRILNCEYYF--------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305
Query: 299 HSF 301
H +
Sbjct: 306 HPW 308
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 258 DIKKDRWY 265
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K + D +++ +E M + HPN++
Sbjct: 266 KLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HR+
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 435
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 478
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 479 RPEGCPEKVYELMRACWQWNPSDRPS 504
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 257 DIKKDRWYNKPLKKGAK 273
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 73 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 128
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 129 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 187 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 235
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 236 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 275
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DEPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 99 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 154
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 155 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 213 ----------KGATWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 262 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 301
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 43/303 (14%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNA 91
+ E+G G +V K +P + A+K I R ++S +E K + +
Sbjct: 39 IXELGRGAYGVVEKXRHVP-SGQIXAVKRI-----RATVNS--QEQKRLLXDLDISXRTV 90
Query: 92 HCSFSV--------DSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKETLSAL 141
C F+V + +W+ SL G +PE + + + AL
Sbjct: 91 DCPFTVTFYGALFREGDVWICXELXDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 149
Query: 142 SYLHNQ-GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
+LH++ +HRDVK N+L ++ G VK DFG+S + + A D PY
Sbjct: 150 EHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD-------DVAKDIDAGCKPY 202
Query: 201 WMAPEVIR---SHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
APE I + GYS K+DIWS GIT +ELA R P L ++ +
Sbjct: 203 -XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE------ 255
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK-NCNKGVEF--FVK 314
E + ++ KFS F D + CL ++ +RP+ +L +H FF + +KG + FVK
Sbjct: 256 -EPSPQL--PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTDVASFVK 312
Query: 315 NVL 317
+L
Sbjct: 313 LIL 315
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF 302
+ K ++
Sbjct: 257 DIKKDRWY 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y + +E+G G ++V + C+ + + A K I+ + S D + RE + L H
Sbjct: 7 NYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
PNI+ H S +S ++V ++ G L + I++ F E + +++ L +++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 121
Query: 145 HNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
H+ G +HR++K N+L S +VKLADFG++ + + H AGTP +
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFAGTPGY 173
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
++PEV++ YS DIW+ G+ L G PP
Sbjct: 174 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 94 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 151 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 206 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 257 DIKKDRWYNKPLKKGAK 273
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K + D +++ +E M + HPN++
Sbjct: 227 KLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HR+
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ H G+ W APE + ++ +
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESL-AYNKF 396
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 439
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 440 RPEGCPEKVYELMRACWQWNPSDRPS 465
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y + +E+G G ++V + C+ + + A K I+ + S D + RE + L H
Sbjct: 6 NYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
PNI+ H S +S ++V ++ G L + I++ F E + +++ L +++Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 120
Query: 145 HNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
H+ G +HR++K N+L S +VKLADFG++ + + H AGTP +
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFAGTPGY 172
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
++PEV++ YS DIW+ G+ L G PP
Sbjct: 173 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K +D+ ++ ++I++E +L+H N++ + + ++ + + S G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 116 IISSCFPD-GLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I PD G+PEP + ++ + YLH G HRD+K N+L D ++K++DFG+
Sbjct: 95 RIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A+++ +++ ++ M GT ++APE+++ ++ D+WS GI + G
Sbjct: 152 -ATVF----RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAE 294
P P S +SD+++ + KK A ++ L ++PS R +
Sbjct: 207 PWDQ--PSDSCQ-------EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 295 KLMKHSFF-KNCNKGVE 310
+ K ++ K KG +
Sbjct: 258 DIKKDRWYNKPLKKGAK 274
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 27/287 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVA--IKAIDLDQSRTDL--DSIRRETKTMSLLS 84
Y++ +E+G G AIV K A IK L SR + + I RE + +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ H F + + +++ +S G L ++ + L E LK+ L + YL
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYL 145
Query: 145 HNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
H++ H D+K NI+ + + +KL DFG++ H ++ GTP
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--------HKIEAGNEFKNIFGTPE 197
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
++APE++ ++ +AD+WS G+ L G P +++L + F +
Sbjct: 198 FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE--- 253
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
+ S KD + L +DP +R + ++HS+ K +
Sbjct: 254 -----EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRR 295
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 65 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 120
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 121 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 179 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 227
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 228 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 267
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 27/283 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVA--IKAIDLDQSRTDL--DSIRRETKTMSLLS 84
Y++ +E+G G AIV K A IK L SR + + I RE + +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ H F + + +++ +S G L ++ + L E LK+ L + YL
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYL 131
Query: 145 HNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
H++ H D+K NI+ + + +KL DFG++ H ++ GTP
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--------HKIEAGNEFKNIFGTPE 183
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
++APE++ ++ +AD+WS G+ L G P +++L + F +
Sbjct: 184 FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE--- 239
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP +R + ++HS+ K
Sbjct: 240 -----EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQ-SRTDLDSIRRETKTMSLLSH 85
+Y + +E+G G ++V + C+ + + A K I+ + S D + RE + L H
Sbjct: 7 NYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
PNI+ H S +S ++V ++ G L + I++ F E + +++ L +++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 121
Query: 145 HNQGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
H+ G +HR++K N+L S +VKLADFG++ + + H AGTP +
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFAGTPGY 173
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
++PEV++ YS DIW+ G+ L G PP
Sbjct: 174 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 207
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 99 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 154
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 155 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 213 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 262 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 301
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 39/302 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A + T VAIK I + +T RE + + H N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYD-HVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 89 LNAH-----CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + +++V M L ++ S L I L + L L Y
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKS---QQLSNDHICYFLYQILRGLKY 159
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A I +P H H + +T+ T ++ A
Sbjct: 160 IHSANVLHRDLKPSNLLINTTCDLKICDFGL-ARIADPEHDH---TGFLTEXVATRWYRA 215
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 249 MTQRFRFSDYEKTLKIKDK-------NKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ + R +Y ++L K K K S+A D++ L +P+KR + E+ + H +
Sbjct: 276 INMKAR--NYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRITVEEALAHPY 332
Query: 302 FK 303
+
Sbjct: 333 LE 334
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRET-------KT 79
S Y+ + EIGVG VYKA P VA+K++ + + T +
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 80 MSLLSHPNILNAH--CSFS-VDSRLWVVMPFMSCGS-LQSIISSCFPDGLPEPCIAIVLK 135
+ HPN++ C+ S D + V + F L++ + P GLP I +++
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L +LH +HRD+K NIL S G+VKLADFG+ A IY +T +
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL-ARIYS-------YQMALTPV 179
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
T ++ APEV+ T Y+ D+WS G E+ +P
Sbjct: 180 VVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKP 217
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + ++ P ++ SF +S L++VM + G + S + EP
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAA 148
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YLH+ ++RD+K N++ D G +K+ DFG++ + +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----------KGRTWXL 198
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APE+I S GY+ D W+ G+ E+A G PP P + ++ + RF
Sbjct: 199 CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
+ FS KD++ + L D +KR
Sbjct: 258 PSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + ++ P ++ SF +S L++V+ + G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +K+ADFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
S VA+K L + +++ +E M + HPN++ +++ ++V +M G+
Sbjct: 57 SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGN 114
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + C + + + + + SA+ YL + +HRD+ A N L + VK+ADF
Sbjct: 115 LLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADF 174
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA-H 231
G+S + ++ H G+ W APE + +T +S K+D+W+FG+ E+A +
Sbjct: 175 GLSRLMTGDTYTAHAGAKFPIK------WTAPESLAYNT-FSIKSDVWAFGVLLWEIATY 227
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
G P + ++Q + EK +++ + ++ M A C P+ RP
Sbjct: 228 GMSPYPGI--------DLSQVYDL--LEKGYRMEQPEGCPPKVYELMRA-CWKWSPADRP 276
Query: 292 S 292
S
Sbjct: 277 S 277
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 27 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRH 82
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 138
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 194
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 255 NCGINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 300 SFF 302
+
Sbjct: 313 PYL 315
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIA 131
+RRE + S L HPNIL + F R+++++ F G L + E A
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSA 118
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM 191
++E AL Y H + +HRD+K N+L G +K+ADFG S H S
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV---------HAPSLR 169
Query: 192 ITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ 251
M GT ++ PE+I T + K D+W G+ E G PP
Sbjct: 170 RRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSP------------ 216
Query: 252 RFRFSDYEKTLKIKDKNKKF----SRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
S E +I + + KF S KD+++ L P +R + +M+H + K ++
Sbjct: 217 ----SHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 272
Query: 308 GV 309
V
Sbjct: 273 RV 274
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 64/318 (20%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+Y IG G +V++A + +S VAIK + D+ + RE + M ++ HPN
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLV--ESDEVAIKKVLQDKRFKN-----RELQIMRIVKHPN 93
Query: 88 ILNAHCSF--SVDSRLWVVMPFMSCGSLQSIISSC-----FPDGLPEPCIAIVLKETLSA 140
+++ F + D + V + + +++ + +P I + + + L +
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 141 LSYLHNQGHLHRDVKAGNILSDS-DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
L+Y+H+ G HRD+K N+L D G +KL DFG SA I +AG P
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKIL---------------IAGEP 197
Query: 200 --------YWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ 251
Y+ APE+I T Y+ DIWS G EL G+P L P +S + ++ +
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP----LFPGESGIDQLVE 253
Query: 252 RFRFSDYEKTLKIKDKNKK-------------FSRAFK--------DMVASCLDQDPSKR 290
+ +IK N FS+ F+ D+++ L+ PS R
Sbjct: 254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSAR 313
Query: 291 PSAEKLMKHSFFKNCNKG 308
+A + + H FF G
Sbjct: 314 LTAIEALCHPFFDELRTG 331
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 28/233 (12%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + HP + SF RL VM + + G L +S E
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGA 258
Query: 136 ETLSALSYLHNQGHL-HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD 194
E +SAL YLH++ ++ +RD+K N++ D DG +K+ DFG+ + G+ M T
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK------DGATMKT- 311
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GTP ++APEV+ + Y D W G+ E+ GR P + EK + + + R
Sbjct: 312 FCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFF 302
F +TL + K+ +++ L +DP +R A+++M+H FF
Sbjct: 371 FP---RTLGPEAKS---------LLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 99 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 154
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 155 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 213 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 262 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 301
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 21 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ G+ W APE + ++ +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK------WTAPESL-AYNKF 190
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 233
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 234 RPEGCPEKVYELMRACWQWNPSDRPS 259
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIA 131
+RRE + S L HPNIL + F R+++++ F G L + E A
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSA 117
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM 191
++E AL Y H + +HRD+K N+L G +K+ADFG S H S
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV---------HAPSLR 168
Query: 192 ITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ 251
M GT ++ PE+I T + K D+W G+ E G PP
Sbjct: 169 RRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSP------------ 215
Query: 252 RFRFSDYEKTLKIKDKNKKF----SRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
S E +I + + KF S KD+++ L P +R + +M+H + K ++
Sbjct: 216 ----SHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271
Query: 308 GV 309
V
Sbjct: 272 RV 273
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM + G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +K+ DFG + +
Sbjct: 134 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM + G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +K+ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 64 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 119
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 120 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 178 ----------KGRTWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 226
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 227 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIA 131
+RRE + S L HPNIL + F R+++++ F G L + E A
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSA 117
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM 191
++E AL Y H + +HRD+K N+L G +K+ADFG S H S
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV---------HAPSLR 168
Query: 192 ITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ 251
M GT ++ PE+I T + K D+W G+ E G PP
Sbjct: 169 RRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSP------------ 215
Query: 252 RFRFSDYEKTLKIKDKNKKF----SRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
S E +I + + KF S KD+++ L P +R + +M+H + K ++
Sbjct: 216 ----SHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271
Query: 308 GV 309
V
Sbjct: 272 RV 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 71 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 126
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 127 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 185 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 233
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 234 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 273
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM ++ G + S +
Sbjct: 71 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 126
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 127 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 185 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 233
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 234 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 273
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM + G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +K+ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIIIS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ ++A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYQMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 34/266 (12%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
++G G VY+ + S VA+K L + +++ +E M + HPN++
Sbjct: 22 KLGGGQYGEVYEGVWKKY-SLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
+ + +++ FM+ G+L + C + + + + SA+ YL + +HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+ A N L + VK+ADFG+S + ++ G+ W APE + ++ +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK------WTAPESL-AYNKF 191
Query: 214 SFKADIWSFGITALELA-HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS 272
S K+D+W+FG+ E+A +G P + D + ++ +K+ +
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYELLEKDYRME 234
Query: 273 R------AFKDMVASCLDQDPSKRPS 292
R +++ +C +PS RPS
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPS 260
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 28/233 (12%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + HP + SF RL VM + + G L +S E
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGA 255
Query: 136 ETLSALSYLHNQGHL-HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD 194
E +SAL YLH++ ++ +RD+K N++ D DG +K+ DFG+ + G+ M T
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK------DGATMKT- 308
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GTP ++APEV+ + Y D W G+ E+ GR P + EK + + + R
Sbjct: 309 FCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFF 302
F +TL + K+ +++ L +DP +R A+++M+H FF
Sbjct: 368 FP---RTLGPEAKS---------LLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++VM +MS G
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVMEYMSKGC 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V+ +MS GS
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HRD+ A N + D +VK+ DFG++ IYE ++ G ++
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----P 194
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 195 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 250
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P RP+
Sbjct: 251 --------DQPDNCPERVTDLMRMCWQFNPKMRPT 277
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYD-NLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 143
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 260 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 303 K 303
+
Sbjct: 318 E 318
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 144
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 200
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 261 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Query: 303 K 303
+
Sbjct: 319 E 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 31 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 145
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 201
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 262 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
Query: 303 K 303
+
Sbjct: 320 E 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 22 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 136
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 192
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 253 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
Query: 303 K 303
+
Sbjct: 311 E 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 143
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 260 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 303 K 303
+
Sbjct: 318 E 318
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 36/250 (14%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K I + D +E +TM LSHP ++ + S + +++V ++S G L +
Sbjct: 35 VAVKMIK--EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 116 IISS----CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLAD 171
+ S P L E C + +++L + +HRD+ A N L D D VK++D
Sbjct: 93 YLRSHGKGLEPSQLLEMCYDVC-----EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSD 147
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPY---WMAPEVIRSHTGYSFKADIWSFGITALE 228
FG++ + + + GT + W APEV + YS K+D+W+FGI E
Sbjct: 148 FGMTRYVLDDQY---------VSSVGTKFPVKWSAPEVFH-YFKYSSKSDVWAFGILMWE 197
Query: 229 L-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDP 287
+ + G+ P L +++K++Q R Y L S ++ SC + P
Sbjct: 198 VFSLGKMPYD-LYTNSEVVLKVSQGHRL--YRPHLA--------SDTIYQIMYSCWHELP 246
Query: 288 SKRPSAEKLM 297
KRP+ ++L+
Sbjct: 247 EKRPTFQQLL 256
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYD-NLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 143
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 260 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 303 K 303
+
Sbjct: 318 E 318
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 33 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 88
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 144
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 145 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 200
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 260
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 261 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 300 SFFK 303
+ +
Sbjct: 319 PYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 25 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 136
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 192
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 253 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 300 SFFK 303
+ +
Sbjct: 311 PYLE 314
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 39/302 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 25 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 136
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 192
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP--PLSHLPPEKSLLMKMTQRFRFSDY 258
+ APE++ + GY+ DIWS G E+ RP P H + + ++ + D
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 259 EKTLKIKDKNKKFSRAFK-----------------DMVASCLDQDPSKRPSAEKLMKHSF 301
+ +K +N S K D++ L +P KR E+ + H +
Sbjct: 253 NXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 302 FK 303
+
Sbjct: 313 LE 314
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 39/302 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 25 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 136
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGL-ARVADPDHDH---TGFLTEYVATRW 192
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP--PLSHLPPEKSLLMKMTQRFRFSDY 258
+ APE++ + GY+ DIWS G E+ RP P H + + ++ + D
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 259 EKTLKIKDKNKKFSRAFK-----------------DMVASCLDQDPSKRPSAEKLMKHSF 301
+ +K +N S K D++ L +P KR E+ + H +
Sbjct: 253 NXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 302 FK 303
+
Sbjct: 313 LE 314
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HRD+ A N + D +VK+ DFG++ IYE +++ G ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL-----P 195
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 251
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P RP+
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPT 278
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 22/280 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y I +E+G G +V++ + A + +S D +++R+E +TMS+L HP +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTL 110
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+N H +F D+ + ++ FMS G L ++ + + E +++ L ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 149 HLHRDVKAGNIL--SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
++H D+K NI+ + +KL DFG++A + +P S +T GT + APEV
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQ-----SVKVT--TGTAEFAAPEV 221
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
+ D+WS G+ + L G P +++L + + D
Sbjct: 222 AEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD--------S 272
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
S KD + L DP+ R + + ++H + N
Sbjct: 273 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 312
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 25 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 136
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 192
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 253 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 300 SFFK 303
+ +
Sbjct: 311 PYLE 314
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 137
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 193
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 254 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 303 K 303
+
Sbjct: 312 E 312
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A ++ V K Q++T RE M +++H NI
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ F+ L ++VM M +S L ++ +L + L +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--------AGTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHG 232
APEVI GY DIWS G+ E+ G
Sbjct: 193 APEVILG-MGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 25 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 136
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 192
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 253 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 300 SFFK 303
+ +
Sbjct: 311 PYLE 314
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 137
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 193
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 254 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 303 K 303
+
Sbjct: 312 E 312
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 45 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 100
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 156
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 212
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 273 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 300 SFFK 303
+ +
Sbjct: 331 PYLE 334
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 27 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 82
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 138
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 194
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 255 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 300 SFFK 303
+ +
Sbjct: 313 PYLE 316
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P + SF +S L++VM + G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +K+ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P + SF +S L++VM + G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +K+ DFG + +
Sbjct: 135 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M +++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M +S L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G+ E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGVIMGEMIKG 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDST--VVAIKAID---LDQSRTDLDSIRRETK 78
+ P +++L +G G V++ + +T + A+K + + ++ D + E
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 79 TMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGL-PEPCIAIVLKET 137
+ + HP I++ +F +L++++ ++S G L + +G+ E L E
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEI 130
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSA-SIYEPSHHHHHGSAMITDMA 196
AL +LH +G ++RD+K NI+ + G VKL DFG+ SI++ + H
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH--------TFC 182
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
GT +MAPE++ +G++ D WS G ++ G PP + +K++ + +
Sbjct: 183 GTIEYMAPEIL-MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
Y T + +D KK K AS L P A ++ H FF++ N
Sbjct: 242 PY-LTQEARDLLKKL---LKRNAASRLGAGPG---DAGEVQAHPFFRHIN 284
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P + SF +S L++VM + G + S +
Sbjct: 79 KVVKLKQIEHTLN----EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +K+ DFG + +
Sbjct: 135 RI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 193 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 242 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 281
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 27 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRH 82
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRG 138
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 194
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 255 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 300 SFF 302
+
Sbjct: 313 PYL 315
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDST--VVAIKAID---LDQSRTDLDSIRRETK 78
+ P +++L +G G V++ + +T + A+K + + ++ D + E
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 79 TMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGL-PEPCIAIVLKET 137
+ + HP I++ +F +L++++ ++S G L + +G+ E L E
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEI 130
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSA-SIYEPSHHHHHGSAMITDMA 196
AL +LH +G ++RD+K NI+ + G VKL DFG+ SI++ + H
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH--------XFC 182
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
GT +MAPE++ +G++ D WS G ++ G PP + +K++ + +
Sbjct: 183 GTIEYMAPEIL-MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
Y T + +D KK K AS L P A ++ H FF++ N
Sbjct: 242 PY-LTQEARDLLKKL---LKRNAASRLGAGPG---DAGEVQAHPFFRHIN 284
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M + + C L I L + L L Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KC--QHLSNDHICYFLYQILRGLKY 143
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 260 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 303 K 303
+
Sbjct: 318 E 318
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + ++ P ++ SF +S L++VM + G + S + EP
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAA 148
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YLH+ ++RD+K N++ D G +++ DFG++ + +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----------KGRTWXL 198
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF 255
GTP ++APE+I S GY+ D W+ G+ E+A G PP P + ++ + RF
Sbjct: 199 CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
+ FS KD++ + L D +KR
Sbjct: 258 PSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP +APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + HP + SF RL VM + + G L +S E
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGA 115
Query: 136 ETLSALSYLHNQGHL-HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD 194
E +SAL YLH++ ++ +RD+K N++ D DG +K+ DFG+ + A +
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-------DGATMKX 168
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GTP ++APEV+ + Y D W G+ E+ GR P + EK + + + R
Sbjct: 169 FCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 227
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFF 302
F +TL + K+ +++ L +DP +R A+++M+H FF
Sbjct: 228 FP---RTLGPEAKS---------LLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
P + ++ + RF + FS KD++ + L D +K
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTK 279
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
+D ++ + +G G +V KA D VAIK I+ S ++ + E + +S +
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD---VAIKQIE---SESERKAFIVELRQLSRV 58
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA--- 140
+HPNI+ + + + + +VM + GSL +++ P LP A + L
Sbjct: 59 NHPNIVKLY--GACLNPVCLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQG 114
Query: 141 LSYLHN---QGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYEPSHHHHHGSAMITDMA 196
++YLH+ + +HRD+K N+L + G+V K+ DFG + I +T+
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----------QTHMTNNK 164
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
G+ WMAPEV + YS K D++S+GI E+ R P + R ++
Sbjct: 165 GSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEI-------GGPAFRIMWA 216
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
+ T KN + + ++ C +DPS+RPS E+++K
Sbjct: 217 VHNGTRPPLIKN--LPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 31 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 87
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 88 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 147
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 148 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 200
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 201 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 249
Query: 292 SAEKL 296
+ E L
Sbjct: 250 TFEYL 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
+D ++ + +G G +V KA D VAIK I+ S ++ + E + +S +
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD---VAIKQIE---SESERKAFIVELRQLSRV 59
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLS---A 140
+HPNI+ + + + + +VM + GSL +++ P LP A + L
Sbjct: 60 NHPNIVKLY--GACLNPVCLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQG 115
Query: 141 LSYLHN---QGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYEPSHHHHHGSAMITDMA 196
++YLH+ + +HRD+K N+L + G+V K+ DFG + I +T+
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----------QTHMTNNK 165
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
G+ WMAPEV + YS K D++S+GI E+ R P + R ++
Sbjct: 166 GSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEI-------GGPAFRIMWA 217
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
+ T KN + + ++ C +DPS+RPS E+++K
Sbjct: 218 VHNGTRPPLIKN--LPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + HP + SF RL VM + + G L +S E
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGA 116
Query: 136 ETLSALSYLHNQGHL-HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD 194
E +SAL YLH++ ++ +RD+K N++ D DG +K+ DFG+ + A +
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-------DGATMKX 169
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GTP ++APEV+ + Y D W G+ E+ GR P + EK + + + R
Sbjct: 170 FCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 228
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFF 302
F +TL + K+ +++ L +DP +R A+++M+H FF
Sbjct: 229 FP---RTLGPEAKS---------LLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 76 ETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
E + + HP + SF RL VM + + G L +S E
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGA 117
Query: 136 ETLSALSYLHNQGHL-HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD 194
E +SAL YLH++ ++ +RD+K N++ D DG +K+ DFG+ + A +
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-------DGATMKX 170
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GTP ++APEV+ + Y D W G+ E+ GR P + EK + + + R
Sbjct: 171 FCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 229
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFF 302
F +TL + K+ +++ L +DP +R A+++M+H FF
Sbjct: 230 FP---RTLGPEAKS---------LLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM +++ G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N+L D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++AP +I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPAIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDST---VVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
Y L IG G Y +C D+ VAIK I + +T RE K + H
Sbjct: 45 YTNLSYIGEGA----YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 100
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ + + +++V M L ++ + L I L + L
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMG-ADLYKLLKT---QHLSNDHICYFLYQILRG 156
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
L Y+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T +
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADPDHDH---TGFLTEYVATRW 212
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSL 245
+ APE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 246 LMKMTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKH 299
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H
Sbjct: 273 NCIINLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 300 SFFK 303
+ +
Sbjct: 331 PYLE 334
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 26 PSSYKILDEIGVGVSAIV----YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMS 81
PS + L IG G V +KA + V+ KAI + + S R +
Sbjct: 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSER--NVLLK 94
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISS--CFPDGLPEPCIAIVLKETLS 139
+ HP ++ H SF +L+ V+ +++ G L + CF EP E S
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL----EPRARFYAAEIAS 150
Query: 140 ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
AL YLH+ ++RD+K NIL DS G + L DFG+ E H S T GTP
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE------HNSTTST-FCGTP 203
Query: 200 YWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
++APEV+ Y D W G E+ +G PP
Sbjct: 204 EYLAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K + L Q L+ E + + ++ P ++ SF +S L++VM + G + S +
Sbjct: 78 KVVKLKQIEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
EP + + YLH+ ++RD+K N++ D G +++ DFG + +
Sbjct: 134 RI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
+ GTP ++APE+I S GY+ D W+ G+ E+A G PP
Sbjct: 192 ----------KGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
P + ++ + RF + FS KD++ + L D +KR
Sbjct: 241 DQPIQIYEKIVSGKVRFPSH------------FSSDLKDLLRNLLQVDLTKR 280
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 33 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 89
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 90 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 149
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 150 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 202
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 203 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 251
Query: 292 SAEKL 296
+ E L
Sbjct: 252 TFEYL 256
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAI+ I + +T RE K + H NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 143
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + +T+ T ++ A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLTEYVATRWYRA 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 260 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 303 K 303
+
Sbjct: 318 E 318
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HRD+ A N + D +VK+ DFG++ IYE ++ G ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----P 195
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 251
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P RP+
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPT 278
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVCEYMSKGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 22/280 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y I +E+G G +V++ + A + +S D +++R+E +TMS+L HP +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTL 216
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+N H +F D+ + ++ FMS G L ++ + + E +++ L ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 149 HLHRDVKAGNIL--SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
++H D+K NI+ + +KL DFG++A + +P S +T GT + APEV
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQ-----SVKVT--TGTAEFAAPEV 327
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
+ D+WS G+ + L G P +++L + + D
Sbjct: 328 AEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD--------S 378
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCN 306
S KD + L DP+ R + + ++H + N
Sbjct: 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 418
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V+ +MS GS
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEXTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 38/261 (14%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGS 112
+VA+KA+ +RE + + L H +I+ C + + +VM ++ GS
Sbjct: 40 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 99
Query: 113 LQSIISSCFPDGLPEPCIAIV-----LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV 167
L+ D LP C+ + ++ ++YLH Q ++HR + A N+L D+D V
Sbjct: 100 LR--------DYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 151
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTP-YWMAPEVIRSHTGYSFKADIWSFGITA 226
K+ DFG++ ++ P H ++ + + +P +W APE ++ Y + +D+WSFG+T
Sbjct: 152 KIGDFGLAKAV--PEGHEYY---RVREDGDSPVFWYAPECLKECKFY-YASDVWSFGVTL 205
Query: 227 LELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL----KIKDKNKKFSRA------FK 276
EL L++ +S K T+ + + T+ ++ ++ ++ R
Sbjct: 206 YEL------LTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIY 259
Query: 277 DMVASCLDQDPSKRPSAEKLM 297
++ +C + + S RP+ + L+
Sbjct: 260 HLMKNCWETEASFRPTFQNLV 280
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 38/261 (14%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGS 112
+VA+KA+ +RE + + L H +I+ C + + +VM ++ GS
Sbjct: 39 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIV-----LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV 167
L+ D LP C+ + ++ ++YLH Q ++HR + A N+L D+D V
Sbjct: 99 LR--------DYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 150
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTP-YWMAPEVIRSHTGYSFKADIWSFGITA 226
K+ DFG++ ++ P H ++ + + +P +W APE ++ Y + +D+WSFG+T
Sbjct: 151 KIGDFGLAKAV--PEGHEYY---RVREDGDSPVFWYAPECLKECKFY-YASDVWSFGVTL 204
Query: 227 LELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL----KIKDKNKKFSRA------FK 276
EL L++ +S K T+ + + T+ ++ ++ ++ R
Sbjct: 205 YEL------LTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIY 258
Query: 277 DMVASCLDQDPSKRPSAEKLM 297
++ +C + + S RP+ + L+
Sbjct: 259 HLMKNCWETEASFRPTFQNLV 279
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 40/260 (15%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNA-HCSFSVDSRLWVVMPFMSCGSLQ 114
V I D+ D++ E + ++L P L H F RL+ VM +++ G L
Sbjct: 50 VKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLM 109
Query: 115 SIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
I EP E L +L ++G ++RD+K N++ DS+G +K+ADFG+
Sbjct: 110 YHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Query: 175 SA-SIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
+I++ GTP ++APE+I ++ Y D W+FG+ E+ G+
Sbjct: 168 CKENIWD--------GVTTKXFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQ 218
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLK-IKDKNKKFSRAF-KDMVASC---LDQDPS 288
P F D ++ + I + N + ++ K+ VA C + + P
Sbjct: 219 AP-----------------FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPG 261
Query: 289 KR----PSAEKLMK-HSFFK 303
KR P E+ +K H+FF+
Sbjct: 262 KRLGCGPEGERDIKEHAFFR 281
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M + H ++ + S + +++V +MS GS
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 44/293 (15%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G V KA +DS AIK I + L +I E ++ L+H ++ + +
Sbjct: 14 LGQGAFGQVVKARN-ALDSRYYAIKKIR--HTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 95 F-------------SVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ S L++ M + G+L +I S + + + ++ L AL
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL-FRQILEAL 129
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP-------SHHHHHGSAMITD 194
SY+H+QG +HRD+K NI D +VK+ DFG++ +++ S + S +T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT ++A EV+ Y+ K D++S GI E+ + P S ++L K+
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL----- 241
Query: 255 FSDYEKTLKIK-----DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+++ I+ D NK + K ++ +D DP+KRP A L+ +
Sbjct: 242 -----RSVSIEFPPDFDDNK--MKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HR++ A N + D +VK+ DFG++ IYE ++ G ++
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----P 196
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 197 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 252
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P+ RP+
Sbjct: 253 --------DQPDNCPERVTDLMRMCWQFNPNMRPT 279
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HR++ A N + D +VK+ DFG++ IYE ++ G ++
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----P 195
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 251
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P+ RP+
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPNMRPT 278
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 209 TTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 265
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 266 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 325
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G+ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 326 GLGRLIEDNEYTARQGAKFPIK------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTK 378
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 379 GRVPYP----------GMVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 427
Query: 292 SAEKL 296
+ E L
Sbjct: 428 TFEYL 432
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD+ A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 40/261 (15%)
Query: 55 VVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNA-HCSFSVDSRLWVVMPFMSCGSL 113
V I D+ D++ E + ++L P L H F RL+ VM +++ G L
Sbjct: 370 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL 429
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
I EP E L +L ++G ++RD+K N++ DS+G +K+ADFG
Sbjct: 430 MYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 487
Query: 174 VSA-SIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
+ +I++ GTP ++APE+I ++ Y D W+FG+ E+ G
Sbjct: 488 MCKENIWD--------GVTTKXFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAG 538
Query: 233 RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLK-IKDKNKKFSRAF-KDMVASC---LDQDP 287
+ P F D ++ + I + N + ++ K+ VA C + + P
Sbjct: 539 QAP-----------------FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 581
Query: 288 SKR----PSAEKLMK-HSFFK 303
KR P E+ +K H+FF+
Sbjct: 582 GKRLGCGPEGERDIKEHAFFR 602
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 143
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + + + T ++ A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLXEXVATRWYRA 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 260 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 303 K 303
+
Sbjct: 318 E 318
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 52 DSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSC 110
D V + D+ D++ E + +SL +HP + C F RL+ VM F++
Sbjct: 49 DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG 108
Query: 111 GSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLA 170
G L I E E +SAL +LH++G ++RD+K N+L D +G KLA
Sbjct: 109 GDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLA 166
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
DFG+ +G T GTP ++APE+++ Y D W+ G+ E+
Sbjct: 167 DFGMC------KEGICNGVTTAT-FCGTPDYIAPEILQEML-YGPAVDWWAMGVLLYEML 218
Query: 231 HGRPPL 236
G P
Sbjct: 219 CGHAPF 224
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y L IG G +V A ++ VAIK I + +T RE K + H NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 89 LNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
+ + + +++V M L ++ + L I L + L L Y
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKY 144
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+H+ LHRD+K N+L ++ +K+ DFG+ A + +P H H + + + T ++ A
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADPDHDH---TGFLXEXVATRWYRA 200
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRP---------PLSHL------PPEKSLLMK 248
PE++ + GY+ DIWS G E+ RP L+H+ P ++ L
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 249 MTQRFRFSDYEKTLKIKDK---NKKFSRA---FKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+ + R +Y +L K+K N+ F A D++ L +P KR E+ + H +
Sbjct: 261 INLKAR--NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Query: 303 K 303
+
Sbjct: 319 E 319
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 139 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 193
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 194 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 243
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 244 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 273
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 37/282 (13%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDS---IRRETKTMSLL-SHPNIL 89
E+G G A+V + I ST A L + R D I E + L S P ++
Sbjct: 36 ELGRGKFAVVRQCIS---KSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD---GLPEPCIAIVLKETLSALSYLHN 146
N H + S + +++ + + G I S C P+ + E + ++K+ L + YLH
Sbjct: 93 NLHEVYENTSEIILILEYAAGGE---IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 147 QGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAM-ITDMAGTPYWM 202
+H D+K NIL S G +K+ DFG+S I G A + ++ GTP ++
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI---------GHACELREIMGTPEYL 200
Query: 203 APEVIRSHTGYSFKADIWSFGITA-LELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKT 261
APE++ ++ + D+W+ GI A + L H P + E L + DY
Sbjct: 201 APEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN----VDYS-- 253
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
++ S+ D + S L ++P KRP+AE + HS+ +
Sbjct: 254 ---EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M +++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M +S L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 143 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 197
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 198 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 247
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 248 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 277
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M +++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M +S L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS G
Sbjct: 42 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGC 98
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 211
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C +DP +RP
Sbjct: 212 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKDPEERP 260
Query: 292 SAEKL 296
+ E L
Sbjct: 261 TFEYL 265
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 200
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 201 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 250
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 251 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 280
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDS-TVVAIKAIDLDQSRTD----LDSIRRETKTMSLL 83
Y++ + IG G ++V + CI ++ A+K +D+ + + + ++RE +L
Sbjct: 28 YELCEVIGKGPFSVVRR--CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGL--PEPCIAIVLKETLSAL 141
HP+I+ ++S D L++V FM L I G E + +++ L AL
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 142 SYLHNQGHLHRDVKAGNIL---SDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT-DMAG 197
Y H+ +HRDVK +L ++ VKL FGV+ + E S ++ G
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--------SGLVAGGRVG 197
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP++MAPEV++ Y D+W G+ L G P +R
Sbjct: 198 TPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLP----------FYGTKERL---- 242
Query: 258 YEKTLKIKDKNKK-----FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+E +K K K S + KD+V L DP++R + + + H + K
Sbjct: 243 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 65 QSRTDLDSIRRETKTMSLLSHPNILNAHCSFS--VDSRLWVVMPFMSCGSLQSIISSCFP 122
Q R ++ + +E + L HPN++ + L++V ++ G + + + P
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKP 133
Query: 123 DGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPS 182
L E ++ + + YLH Q +HRD+K N+L DG +K+ADFGV S
Sbjct: 134 --LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGV-------S 184
Query: 183 HHHHHGSAMITDMAGTPYWMAPEVI-RSHTGYSFKA-DIWSFGITALELAHGRPPLSHLP 240
+ A++++ GTP +MAPE + + +S KA D+W+ G+T G+ P
Sbjct: 185 NEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM--- 241
Query: 241 PEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHS 300
+M + + + + L+ D+ + KD++ LD++P R ++ H
Sbjct: 242 --DERIMCLHSKIK----SQALEFPDQ-PDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294
Query: 301 F 301
+
Sbjct: 295 W 295
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 174 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 228
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 229 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 278
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 279 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 308
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 199
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L RF
Sbjct: 200 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEG--- 249
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 250 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 279
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDS-TVVAIKAIDLDQSRTD----LDSIRRETKTMSLL 83
Y++ + IG G ++V + CI ++ A+K +D+ + + + ++RE +L
Sbjct: 26 YELCEVIGKGPFSVVRR--CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGL--PEPCIAIVLKETLSAL 141
HP+I+ ++S D L++V FM L I G E + +++ L AL
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 142 SYLHNQGHLHRDVKAGNIL---SDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT-DMAG 197
Y H+ +HRDVK +L ++ VKL FGV+ + E S ++ G
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--------SGLVAGGRVG 195
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP++MAPEV++ Y D+W G+ L G P +R
Sbjct: 196 TPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLP----------FYGTKERL---- 240
Query: 258 YEKTLKIKDKNKK-----FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+E +K K K S + KD+V L DP++R + + + H + K
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 206
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 207 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 256
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 257 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 286
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSRTDLDSIRRETKTMSLL--- 83
Y++ ++IGVG ++ + CI + + A+K ID S R T+ + +L
Sbjct: 23 GYEVKEDIGVGSYSVCKR--CIHKATNMEFAVKIID--------KSKRDPTEEIEILLRY 72
Query: 84 -SHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSAL 141
HPNI+ + ++VV M G L I+ F E + VL +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTV 129
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH QG +HRD+K NIL S + S+++ DFG + + + ++
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLMTPCY 182
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLP---PEKSLLMKMTQRFR 254
T ++APEV+ GY DIWS G+ + G P ++ P PE+ L + +F
Sbjct: 183 TANFVAPEVLERQ-GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS 241
Query: 255 FS-DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
S Y ++ S KD+V+ L DP +R +A +++H +
Sbjct: 242 LSGGYWNSV---------SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 17/287 (5%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH 92
D +G G A V I + + S A+K I+ R H N+L
Sbjct: 19 DVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 93 CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHR 152
F + R ++V M GS+ S I E ++V+++ SAL +LHN+G HR
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 153 DVKAGNILSDSDGS---VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
D+K NIL + VK+ DFG+ + I + + G+ +MAPEV+ +
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 210 HTG----YSFKADIWSFGITALELAHGRPPL-----SHLPPEKSLLMKMTQRFRF-SDYE 259
+ Y + D+WS G+ L G PP S ++ Q F S E
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 260 KTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC 305
+ DK+ S A KD+++ L +D +R SA ++++H + + C
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 199
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 200 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 249
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 250 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 279
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 35 IGVGVSA-IVYKAICIPMDSTV-VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G S + Y + +P V VAIKA+ + E M HPNI+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 93 CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSALSYLHNQGHLH 151
+ +V +M GSL + + + DG + +L+ + + YL + G++H
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVH 174
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSH 210
RD+ A N+L DS+ K++DFG+S + + +A T P W APE I
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-----AAXTTTGGKIPIRWTAPEAIAFR 229
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNK 269
T +S +D+WSFG+ E LA+G P MT R S E+ ++
Sbjct: 230 T-FSSASDVWSFGVVMWEVLAYGERP----------YWNMTNRDVISSVEEGYRLP-APM 277
Query: 270 KFSRAFKDMVASCLDQDPSKRPSAEKLM 297
A ++ C +D ++RP +++
Sbjct: 278 GCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 35 IGVGVSA-IVYKAICIPMDSTV-VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH 92
IG G S + Y + +P V VAIKA+ + E M HPNI+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 93 CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSALSYLHNQGHLH 151
+ +V +M GSL + + + DG + +L+ + + YL + G++H
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVH 174
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSH 210
RD+ A N+L DS+ K++DFG+S + + +A T P W APE I
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-----AAYTTTGGKIPIRWTAPEAIAFR 229
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNK 269
T +S +D+WSFG+ E LA+G P MT R S E+ ++
Sbjct: 230 T-FSSASDVWSFGVVMWEVLAYGERP----------YWNMTNRDVISSVEEGYRLP-APM 277
Query: 270 KFSRAFKDMVASCLDQDPSKRPSAEKLM 297
A ++ C +D ++RP +++
Sbjct: 278 GCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 36/307 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLD--QSRTDLDSIRRET--KTMSLLS 84
Y+ + EIG G V+KA + VA+K + + + L +IR + +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 85 HPNILNAH--CSFSV---DSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLS 139
HPN++ C+ S +++L +V + L + + G+P I ++ + L
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 140 ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
L +LH+ +HRD+K NIL S G +KLADFG+ A IY +T + T
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL-ARIYS-------FQMALTSVVVTL 183
Query: 200 YWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF---S 256
++ APEV+ + Y+ D+WS G E+ R PL + L K+
Sbjct: 184 WYRAPEVL-LQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 257 DYEKTLKIKDKN---------KKFSRAF----KDMVASCLDQDPSKRPSAEKLMKHSFFK 303
D+ + + + + +KF KD++ CL +P+KR SA + H +F+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 304 NCNKGVE 310
+ + E
Sbjct: 302 DLERCKE 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 36/307 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSR--TDLDSIRRET--KTMSLLS 84
Y+ + EIG G V+KA + VA+K + + L +IR + +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 85 HPNILNAH--CSFSV---DSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLS 139
HPN++ C+ S +++L +V + L + + G+P I ++ + L
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 140 ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
L +LH+ +HRD+K NIL S G +KLADFG+ A IY +T + T
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL-ARIYS-------FQMALTSVVVTL 183
Query: 200 YWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF---S 256
++ APEV+ + Y+ D+WS G E+ R PL + L K+
Sbjct: 184 WYRAPEVLL-QSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 257 DYEKTLKIKDKN---------KKFSRAF----KDMVASCLDQDPSKRPSAEKLMKHSFFK 303
D+ + + + + +KF KD++ CL +P+KR SA + H +F+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 304 NCNKGVE 310
+ + E
Sbjct: 302 DLERCKE 308
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y IL+E+G G +V++ C+ + V + D +++ E M+ L HP +
Sbjct: 53 YDILEELGSGAFGVVHR--CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+N H +F + +++ F+S G L I++ + E + +++ L ++H
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 149 HLHRDVKAGNILSDSD--GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
+H D+K NI+ ++ SVK+ DFG++ + + ++ T + APE+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKL--------NPDEIVKVTTATAEFAAPEI 221
Query: 207 I-RSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
+ R G F D+W+ G+ L G P + ++L Q + D+E +
Sbjct: 222 VDREPVG--FYTDMWAIGVLGYVLLSGLSPFAGEDDLETL-----QNVKRCDWEFD---E 271
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
D S KD + + L ++P KR + ++H + K
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P P +A + E +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 142 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 196
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 197 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 246
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 247 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 276
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M +S L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 35 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 91
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 92 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 151
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 152 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 204
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 205 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 253
Query: 292 SAEKL 296
+ E L
Sbjct: 254 TFEYL 258
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 35/307 (11%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAID-LDQSRTDLDSIRRETKTMSLLSH 85
S +++ +G G +V A P +VAIK I+ D+ L ++R E K + H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPT-GEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 86 PNILNAHC-----SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ SF + ++++ M L +IS+ L + I + +TL A
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIST---QMLSDDHIQYFIYQTLRA 124
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM---ITDMAG 197
+ LH +HRD+K N+L +S+ +K+ DFG++ I E + + + +T+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL----------- 246
T ++ APEV+ + YS D+WS G EL RP LL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 247 ---MKMTQRFRFSDYEKTLKIKDK---NKKFSRAFK---DMVASCLDQDPSKRPSAEKLM 297
++ + R +Y K+L + K F R D++ L DP+KR +A++ +
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 298 KHSFFKN 304
+H + +
Sbjct: 305 EHPYLQT 311
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P P +A + E +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 206
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 207 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 256
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 257 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 286
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 35/307 (11%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAID-LDQSRTDLDSIRRETKTMSLLSH 85
S +++ +G G +V A P +VAIK I+ D+ L ++R E K + H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPT-GEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 86 PNILNAHC-----SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ SF + ++++ M L +IS+ L + I + +TL A
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIST---QMLSDDHIQYFIYQTLRA 124
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM---ITDMAG 197
+ LH +HRD+K N+L +S+ +K+ DFG++ I E + + + +T+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL----------- 246
T ++ APEV+ + YS D+WS G EL RP LL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 247 ---MKMTQRFRFSDYEKTLKIKDK---NKKFSRAFK---DMVASCLDQDPSKRPSAEKLM 297
++ + R +Y K+L + K F R D++ L DP+KR +A++ +
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 298 KHSFFKN 304
+H + +
Sbjct: 305 EHPYLQT 311
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N D +VK+ DFG++ IYE ++ G ++ W
Sbjct: 139 AYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-----PVRW 193
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 194 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 243
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 244 --GLLDKPDNCPDMLLELMRMCWQYNPKMRPS 273
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 27 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 137
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVT 189
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 190 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 26/281 (9%)
Query: 18 QKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRET 77
+K + + S K+ ++G G V+ A T VA+K + +++ E
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATY--NKHTKVAVKT--MKPGSMSVEAFLAEA 234
Query: 78 KTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKET 137
M L H ++ H + + ++++ FM+ GSL + S P P + +
Sbjct: 235 NVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI 293
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
++++ + ++HRD++A NIL + K+ADFG++ I + + G+
Sbjct: 294 AEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK--- 350
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELA-HGRPPLSHLP-PEKSLLMKMTQRFRF 255
W APE I + ++ K+D+WSFGI +E+ +GR P + PE ++ + + +R
Sbjct: 351 ---WTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRM 404
Query: 256 SDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
E +++ C P +RP+ E +
Sbjct: 405 PRPENC----------PEELYNIMMRCWKNRPEERPTFEYI 435
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 28/271 (10%)
Query: 35 IGVGVSAIVYKAICI--PMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN-A 91
IG G +VY I + AIK++ +++ RE M L+HPN+L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 92 HCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLH 151
+ V++P+M G L I S + + I+ L + + YL Q +H
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARGMEYLAEQKFVH 147
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASI----YEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
RD+ A N + D +VK+ADFG++ I Y H H + W A E +
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK-------WTALESL 200
Query: 208 RSHTGYSFKADIWSFGITALE-LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
+++ ++ K+D+WSFG+ E L G PP H+ P F + + +
Sbjct: 201 QTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDP-----------FDLTHFLAQGRRLP 248
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ + + ++ C + DP+ RP+ L+
Sbjct: 249 QPEYCPDSLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 15/189 (7%)
Query: 56 VAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPNILNAHCSFSVDSRL----WVVMPFMS 109
VA+K + D +R RRE + + L+HP I+ + + ++ ++VM ++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 110 CGSLQSIISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
+L+ I+ + +G P AI V+ + AL++ H G +HRDVK NIL + +VK
Sbjct: 100 GVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVK 156
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ +I + + +A+I GT +++PE R + ++D++S G E
Sbjct: 157 VVDFGIARAIADSGNSVXQTAAVI----GTAQYLSPEQARGDS-VDARSDVYSLGCVLYE 211
Query: 229 LAHGRPPLS 237
+ G PP +
Sbjct: 212 VLTGEPPFT 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSL 82
+ Y+ L +G G Y A+C +D VAIK + QS RE + +
Sbjct: 25 AVYRDLQPVGSGA----YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH 80
Query: 83 LSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKE 136
+ H N++ F+ D L ++VMPFM L ++ + L E I ++ +
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKH---EKLGEDRIQFLVYQ 136
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
L L Y+H G +HRD+K GN+ + D +K+ DFG++ + +
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA----------RQADSEMXGXV 186
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
T ++ APEVI + Y+ DIWS G E+ G+
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M +S L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
S K+ ++G G V+ A T VA+K + +++ E M L H
Sbjct: 16 SLKLEKKLGAGQFGEVWMATY--NKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDK 71
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
++ H + + ++++ FM+ GSL + S P P + + ++++ +
Sbjct: 72 LVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
++HRD++A NIL + K+ADFG++ I + + G+ W APE I
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK------WTAPEAI 184
Query: 208 RSHTGYSFKADIWSFGITALELA-HGRPPLSHLP-PEKSLLMKMTQRFRFSDYEKTLKIK 265
+ ++ K+D+WSFGI +E+ +GR P + PE ++ + + +R E
Sbjct: 185 -NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRPENC---- 237
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
+++ C P +RP+ E +
Sbjct: 238 ------PEELYNIMMRCWKNRPEERPTFEYI 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 208 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 264
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 325 GLARLIEDNEYTARQGAKFPIK------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTK 377
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 378 GRVPYP----------GMVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 426
Query: 292 SAEKL 296
+ E L
Sbjct: 427 TFEYL 431
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLXGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 21/235 (8%)
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVD--SRLWVVMPFMSCGSLQSIISSCFPDGLPEPC 129
++++E + + L H N++ + ++++VM + CG +Q ++ S P
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQ 110
Query: 130 IAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGS 189
+ + L YLH+QG +H+D+K GN+L + G++K++ GV+ ++ H
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL-----HPFAAD 165
Query: 190 AMITDMAGTPYWMAPEVIRSHTGYS-FKADIWSFGITALELAHGRPPLSHLPPEKSLLMK 248
G+P + PE+ +S FK DIWS G+T + G P E + K
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-----EGDNIYK 220
Query: 249 MTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ + Y D S K M L+ +P+KR S ++ +HS+F+
Sbjct: 221 LFENIGKGSYAIP---GDCGPPLSDLLKGM----LEYEPAKRFSIRQIRQHSWFR 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 54 TVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
T VA+K + + S ++L + E + ++HP+++ + + S D L +++ + GSL
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 114 QSIISSCFPDG--------------LPEPC-IAIVLKETLS-------ALSYLHNQGHLH 151
+ + G L P A+ + + +S + YL +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHT 211
RD+ A NIL +K++DFG+S +YE + I WMA E + H
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK-----WMAIESLFDHI 228
Query: 212 GYSFKADIWSFGITALELAH-GRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNK 269
Y+ ++D+WSFG+ E+ G P +PPE+ L+K R D
Sbjct: 229 -YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD------------ 275
Query: 270 KFSRAFKDMVASCLDQDPSKRP 291
S ++ C Q+P KRP
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRP 297
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLXGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 208 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 264
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 325 GLARLIEDNEYTARQGAKFPIK------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTK 377
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 378 GRVPYP----------GMVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 426
Query: 292 SAEKL 296
+ E L
Sbjct: 427 TFEYL 431
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 15/189 (7%)
Query: 56 VAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPNILNAHCSFSVDSRL----WVVMPFMS 109
VA+K + D +R RRE + + L+HP I+ + + ++ ++VM ++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 110 CGSLQSIISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
+L+ I+ + +G P AI V+ + AL++ H G +HRDVK NI+ + +VK
Sbjct: 100 GVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ +I + + +A+I GT +++PE R + ++D++S G E
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVI----GTAQYLSPEQARGDS-VDARSDVYSLGCVLYE 211
Query: 229 LAHGRPPLS 237
+ G PP +
Sbjct: 212 VLTGEPPFT 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 36/300 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSR--TDLDSIRRET--KTMSLLS 84
Y+ + EIG G V+KA + VA+K + + L +IR + +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 85 HPNILNAH--CSFSV---DSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLS 139
HPN++ C+ S +++L +V + L + + G+P I ++ + L
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 140 ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
L +LH+ +HRD+K NIL S G +KLADFG+ A IY +T + T
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL-ARIYS-------FQMALTSVVVTL 183
Query: 200 YWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRF---S 256
++ APEV+ + Y+ D+WS G E+ R PL + L K+
Sbjct: 184 WYRAPEVL-LQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 257 DYEKTLKIKDKN---------KKFSRAF----KDMVASCLDQDPSKRPSAEKLMKHSFFK 303
D+ + + + + +KF KD++ CL +P+KR SA + H +F+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPEVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 133
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVTRYYR 185
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 186 APEVILG-MGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 141
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVTRYYR 193
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 194 APEVILG-MGYKENVDIWSVGCIMGEMV 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 178
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 230
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 231 APEVILG-MGYKENVDIWSVGCIMGEMV 257
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLCGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLXGIK 133
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 185
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 186 APEVILG-MGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 134
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVTRYYR 186
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 187 APEVILG-MGYKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 140
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 192
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 28 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 138
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+ T
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMVPFVVT 190
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G E+ G
Sbjct: 191 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 134
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 186
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 187 APEVILG-MGYKENVDIWSVGCIMGEMV 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 139
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 191
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 192 APEVILG-MGYKENVDIWSVGCIMGEMV 218
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +M+ GS
Sbjct: 39 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGS 95
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 155
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 156 GLARLIEDNEYTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 208
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 209 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 257
Query: 292 SAEKL 296
+ E L
Sbjct: 258 TFEYL 262
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 141
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVTRYYR 193
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 194 APEVILG-MGYKENVDIWSVGCIMGEMV 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 35/307 (11%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAID-LDQSRTDLDSIRRETKTMSLLSH 85
S +++ +G G +V A P +VAIK I+ D+ L ++R E K + H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPT-GEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 86 PNILNAHC-----SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
NI+ SF + ++++ M L +IS+ L + I + +TL A
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIST---QMLSDDHIQYFIYQTLRA 124
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM---ITDMAG 197
+ LH +HRD+K N+L +S+ +K+ DFG++ I E + + + + +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLL----------- 246
T ++ APEV+ + YS D+WS G EL RP LL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 247 ---MKMTQRFRFSDYEKTLKIKDK---NKKFSRAFK---DMVASCLDQDPSKRPSAEKLM 297
++ + R +Y K+L + K F R D++ L DP+KR +A++ +
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 298 KHSFFKN 304
+H + +
Sbjct: 305 EHPYLQT 311
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIA 131
+RRE + + L HPNIL + F R+++++ + G L + + SC D E A
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD---EQRTA 126
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAM 191
+++E AL Y H + +HRD+K N+L G +K+ADFG S H S
Sbjct: 127 TIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSV---------HAPSLR 177
Query: 192 ITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQ 251
M GT ++ PE+I ++ K D+W G+ EL G PP ++
Sbjct: 178 RKTMCGTLDYLPPEMIEGRM-HNEKVDLWCIGVLCYELLVGNPPFESASHNET------- 229
Query: 252 RFRFSDYEKTLKIKDK-NKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGV 309
Y + +K+ K +D+++ L +PS+R ++ H + + ++ V
Sbjct: 230 ------YRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRV 282
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 291 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 347
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 407
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 408 GLARLIEDNEYTARQGAKFPIK------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTK 460
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 461 GRVPYP----------GMVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 509
Query: 292 SAEKL 296
+ E L
Sbjct: 510 TFEYL 514
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 135/311 (43%), Gaps = 47/311 (15%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLSH 85
S Y+ L +IG G V+KA V A+K + ++ + + RE K + LL H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKV-ALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSC-GSLQSIISSCFPD--GLPEPC--------IAIVL 134
N++N ++ P+ C GS+ + C D GL I V+
Sbjct: 77 ENVVNL-----IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 135 KETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSA--SIYEPSHHHHHGSAMI 192
+ L+ L Y+H LHRD+KA N+L DG +KLADFG++ S+ + S + + + ++
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQR 252
T ++ PE++ Y D+W G E+ R P+ E+ L ++Q
Sbjct: 192 -----TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQL 245
Query: 253 F------------RFSDYEK-------TLKIKDKNKKFSR--AFKDMVASCLDQDPSKRP 291
+ YEK K+KD+ K + R D++ L DP++R
Sbjct: 246 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 292 SAEKLMKHSFF 302
++ + H FF
Sbjct: 306 DSDDALNHDFF 316
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 21 QYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
++ +DPS + EIG G +V+ + D VAIK I + + ++ D I E + M
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR-EGAMSEEDFIE-EAEVM 59
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
LSHP ++ + + + +V FM G L + + E + + L +
Sbjct: 60 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEG 118
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
++YL +HRD+ A N L + +K++DFG++ + + + T GT +
Sbjct: 119 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------TSSTGTKF 169
Query: 201 ---WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W +PEV S + YS K+D+WSFG+ E+ + G+ P + ++ ++ FR
Sbjct: 170 PVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDISTGFRLY 227
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
K + S ++ C + P RP+ +L++
Sbjct: 228 ----------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +MS GS
Sbjct: 208 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVGEYMSKGS 264
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 325 GLARLIEDNEYTARQGAKFPIK------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTK 377
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 378 GRVPYP----------GMVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 426
Query: 292 SAEKL 296
+ E L
Sbjct: 427 TFEYL 431
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 44/293 (15%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G V KA +DS AIK I + L +I E ++ L+H ++ + +
Sbjct: 14 LGQGAFGQVVKARN-ALDSRYYAIKKIR--HTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 95 F-------------SVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ S L++ M + +L +I S + + + ++ L AL
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL-FRQILEAL 129
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP-------SHHHHHGSAMITD 194
SY+H+QG +HRD+K NI D +VK+ DFG++ +++ S + S +T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT ++A EV+ Y+ K D++S GI E+ + P S ++L K+
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL----- 241
Query: 255 FSDYEKTLKIK-----DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+++ I+ D NK + K ++ +D DP+KRP A L+ +
Sbjct: 242 -----RSVSIEFPPDFDDNK--MKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 30/280 (10%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
+DPS + EIG G +V+ + D VAIK I + D E + M L
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIK--EGSMSEDDFIEEAEVMMKL 79
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
SHP ++ + + + +V FM G L + + E + + L + ++Y
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAY 138
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY--- 200
L +HRD+ A N L + +K++DFG++ + + + T GT +
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------TSSTGTKFPVK 189
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYE 259
W +PEV S + YS K+D+WSFG+ E+ + G+ P + ++ ++ FR
Sbjct: 190 WASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDISTGFRLY--- 244
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
K + S ++ C + P RP+ +L++
Sbjct: 245 -------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 277
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y+ L IG G IV A +D V K Q++T RE M ++H NI
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 89 LNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
++ F+ L ++VM M Q I L ++ +L + L +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIK 178
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
+LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T Y+
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMTPYVVTRYYR 230
Query: 203 APEVIRSHTGYSFKADIWSFGITALELA 230
APEVI GY DIWS G E+
Sbjct: 231 APEVILG-MGYKENVDIWSVGCIMGEMV 257
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 23/258 (8%)
Query: 56 VAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPNILNAHCSFSVDSRL----WVVMPFMS 109
VA+K + D +R RRE + + L+HP I+ + + ++ ++VM ++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 110 CGSLQSIISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
+L+ I+ + +G P AI V+ + AL++ H G +HRDVK NI+ + +VK
Sbjct: 100 GVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ +I + + +A+I GT +++PE R + ++D++S G E
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVI----GTAQYLSPEQARGDS-VDARSDVYSLGCVLYE 211
Query: 229 LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPS 288
+ G PP + P+ Q R E + +++ S +V L ++P
Sbjct: 212 VLTGEPPFTGDSPDSVAY----QHVR----EDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 289 KRPSAEKLMKHSFFKNCN 306
R M+ + N
Sbjct: 264 NRYQTAAEMRADLVRVHN 281
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 20/292 (6%)
Query: 29 YKILDEI-GVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM-SLLSHP 86
YK+ E+ G G A V A+ + + A+K I+ Q+ + RE +T+ +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSL-QNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNK 71
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NIL F D+R ++V + GS+ + I E + V+++ +AL +LH
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQK--QKHFNEREASRVVRDVAAALDFLHT 129
Query: 147 QGHLHRDVKAGNILSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
+G HRD+K NIL +S VK+ DF + + + + + +T G+ +MA
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 204 PEVIRSHTG----YSFKADIWSFGITALELAHGRPPL-----SHLPPEKSLLMKMTQRFR 254
PEV+ T Y + D+WS G+ + G PP + ++ + ++ Q
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 249
Query: 255 F-SDYEKTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
F S E + DK+ S KD+++ L +D +R SA ++++H + +
Sbjct: 250 FESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 53 STVVAIKAIDLDQS-RTDLDSIRRETKTMSLLSHPNILN-----AHCSFSVDSRLWVVMP 106
S VA+K + LD S + +++ E M SHPN++ S + V++P
Sbjct: 62 SLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121
Query: 107 FMSCGSLQSIIS----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSD 162
FM G L + + P +P + + + + YL N+ LHRD+ A N +
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR 181
Query: 163 SDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWS 221
D +V +ADFG+S IY ++ +A P W+A E + Y+ K+D+W+
Sbjct: 182 DDMTVCVADFGLSKKIYSGDYYRQ------GRIAKMPVKWIAIESLADRV-YTSKSDVWA 234
Query: 222 FGITALELA 230
FG+T E+A
Sbjct: 235 FGVTMWEIA 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHL-HRDVKAGNILSDSDGSVKLADFGVSAS 177
+CF +P I ++K L++ SY+HN+ ++ HRDVK NIL D +G VKL+DFG S
Sbjct: 145 TCF---IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 178 IYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS-FKADIWSFGITALELAHGRPPL 236
+ + I GT +M PE + + Y+ K DIWS GI + + P
Sbjct: 202 MVDKK---------IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
Query: 237 SHLPPEKSLLMKMTQRFRFSDYEKTLK-------IKDKNKKFSRAFK-----DMVASCLD 284
S K L+++ R + E L + +K S F D + L
Sbjct: 253 SL----KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR 308
Query: 285 QDPSKRPSAEKLMKHSFFKNCN 306
++P++R ++E +KH + + N
Sbjct: 309 KNPAERITSEDALKHEWLADTN 330
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 21 QYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
++ +DPS + EIG G +V+ + D VAIK I + + ++ D I E + M
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR-EGAMSEEDFIE-EAEVM 57
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
LSHP ++ + + + +V FM G L + + E + + L +
Sbjct: 58 MKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEG 116
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
++YL +HRD+ A N L + +K++DFG++ + + + T GT +
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------TSSTGTKF 167
Query: 201 ---WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W +PEV S + YS K+D+WSFG+ E+ + G+ P + ++ ++ FR
Sbjct: 168 PVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDISTGFRLY 225
Query: 257 DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
K + S ++ C + P RP+ +L++
Sbjct: 226 ----------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 54 TVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
T VA+K + + S ++L + E + ++HP+++ + + S D L +++ + GSL
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 114 QSIISSCFPDG--------------LPEPC-IAIVLKETLS-------ALSYLHNQGHLH 151
+ + G L P A+ + + +S + YL +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVH 173
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHT 211
RD+ A NIL +K++DFG+S +YE I WMA E + H
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-----WMAIESLFDHI 228
Query: 212 GYSFKADIWSFGITALELAH-GRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNK 269
Y+ ++D+WSFG+ E+ G P +PPE+ L+K R D
Sbjct: 229 -YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD------------ 275
Query: 270 KFSRAFKDMVASCLDQDPSKRP 291
S ++ C Q+P KRP
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRP 297
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 22 YPLDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
+ +DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVM 58
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKE 136
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KD 113
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + + GS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-- 171
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF+
Sbjct: 172 ----WSPPEVL-MYSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFT 211
Query: 257 DYEKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLM 297
+ E I + + S ++ SC + +RP+ + L+
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 15/189 (7%)
Query: 56 VAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPNILNAHCSFSVDSRL----WVVMPFMS 109
VA+K + D +R RRE + + L+HP I+ + + ++ ++VM ++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 110 CGSLQSIISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
+L+ I+ + +G P AI V+ + AL++ H G +HRDVK NI+ + +VK
Sbjct: 100 GVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ +I + + +A+I GT +++PE R + ++D++S G E
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVI----GTAQYLSPEQARGDS-VDARSDVYSLGCVLYE 211
Query: 229 LAHGRPPLS 237
+ G PP +
Sbjct: 212 VLTGEPPFT 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G GV A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGVFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI+ + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VA+K + Q++T RE + ++
Sbjct: 26 YQQLKPIGSGAQGIV----CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI++ F+ L ++VM M Q I L ++ +L + L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + + M+T T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------ACTNFMMTPYVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY+ DIWS G EL G
Sbjct: 189 RYYRAPEVILG-MGYAANVDIWSVGCIMGELVKG 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 17/287 (5%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH 92
D +G G A V I + + S A+K I+ R H N+L
Sbjct: 19 DVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 93 CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHR 152
F + R ++V M GS+ S I E ++V+++ SAL +LHN+G HR
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 153 DVKAGNILSDSDGS---VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRS 209
D+K NIL + VK+ DF + + I + + G+ +MAPEV+ +
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 210 HTG----YSFKADIWSFGITALELAHGRPPL-----SHLPPEKSLLMKMTQRFRF-SDYE 259
+ Y + D+WS G+ L G PP S ++ Q F S E
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 260 KTLKIKDKN-KKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC 305
+ DK+ S A KD+++ L +D +R SA ++++H + + C
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 51/313 (16%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLSH 85
S Y+ L +IG G V+KA V A+K + ++ + + RE K + LL H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKV-ALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 86 PNILNAH--CSFSVDSRLWVVMPFMSC-GSLQSIISSCFPD--GLPEPC--------IAI 132
N++N C P+ C GS+ + C D GL I
Sbjct: 77 ENVVNLIEICRTKAS-------PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSA--SIYEPSHHHHHGSA 190
V++ L+ L Y+H LHRD+KA N+L DG +KLADFG++ S+ + S + + +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 191 MITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMT 250
++ T ++ PE++ Y D+W G E+ R P+ E+ L ++
Sbjct: 190 VV-----TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALIS 243
Query: 251 QRF------------RFSDYEK-------TLKIKDKNKKFSR--AFKDMVASCLDQDPSK 289
Q + YEK K+KD+ K + R D++ L DP++
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 290 RPSAEKLMKHSFF 302
R ++ + H FF
Sbjct: 304 RIDSDDALNHDFF 316
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
+DPS + EIG G +V+ + D VAIK I + + ++ D I E + M L
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR-EGAMSEEDFIE-EAEVMMKL 57
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
SHP ++ + + + +V FM G L + + E + + L + ++Y
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAY 116
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY--- 200
L +HRD+ A N L + +K++DFG++ + + + T GT +
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------TSSTGTKFPVK 167
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYE 259
W +PEV S + YS K+D+WSFG+ E+ + G+ P + ++ ++ FR
Sbjct: 168 WASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDISTGFRLY--- 222
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
K + S ++ C + P RP+ +L++
Sbjct: 223 -------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
+DPS + EIG G +V+ + D VAIK I + + ++ D I E + M L
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR-EGAMSEEDFIE-EAEVMMKL 59
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
SHP ++ + + + +V FM G L + + E + + L + ++Y
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAY 118
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY--- 200
L +HRD+ A N L + +K++DFG++ + + + T GT +
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------TSSTGTKFPVK 169
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYE 259
W +PEV S + YS K+D+WSFG+ E+ + G+ P + ++ ++ FR
Sbjct: 170 WASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDISTGFRLY--- 224
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
K + S ++ C + P RP+ +L++
Sbjct: 225 -------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 54 TVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
T VA+K + + S ++L + E + ++HP+++ + + S D L +++ + GSL
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 114 QSIISSCFPDG--------------LPEPC-IAIVLKETLS-------ALSYLHNQGHLH 151
+ + G L P A+ + + +S + YL +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 152 RDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHT 211
RD+ A NIL +K++DFG+S +YE I WMA E + H
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-----WMAIESLFDHI 228
Query: 212 GYSFKADIWSFGITALELAH-GRPPLSHLPPEKSL-LMKMTQRFRFSDYEKTLKIKDKNK 269
Y+ ++D+WSFG+ E+ G P +PPE+ L+K R D
Sbjct: 229 -YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD------------ 275
Query: 270 KFSRAFKDMVASCLDQDPSKRP 291
S ++ C Q+P KRP
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRP 297
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 25/293 (8%)
Query: 15 TIAQKIQYPL--DPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDS 72
+A + P+ D Y+++ +IG G + + + + +VA+K I+ + + D ++
Sbjct: 5 AVAGPMDLPIMHDSDRYELVKDIGAGNFGVA-RLMRDKQANELVAVKYIERGE-KID-EN 61
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
++RE L HPNI+ + L +VM + S G L I C E
Sbjct: 62 VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARF 119
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS--VKLADFGVS-ASIYEPSHHHHHGS 189
++ +S +SY H HRD+K N L D + +K+ADFG S AS+ H S
Sbjct: 120 FFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL----HSQPKS 175
Query: 190 AMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM 249
A+ GTP ++APEV+ AD+WS G+T + G P P E K
Sbjct: 176 AV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED-PEEPKNFRKT 229
Query: 250 TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
R Y I D S + +++ DP+KR S ++ H +F
Sbjct: 230 IHRILNVQY----AIPDY-VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 15/189 (7%)
Query: 56 VAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPNILNAHCSFSVDSRL----WVVMPFMS 109
VA+K + D +R RRE + + L+HP I+ + + ++ ++VM ++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 110 CGSLQSIISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
+L+ I+ + +G P AI V+ + AL++ H G +HRDVK NI+ + +VK
Sbjct: 100 GVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ +I + + +A+I GT +++PE R + ++D++S G E
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVI----GTAQYLSPEQARGDS-VDARSDVYSLGCVLYE 211
Query: 229 LAHGRPPLS 237
+ G PP +
Sbjct: 212 VLTGEPPFT 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
+DPS + EIG G +V+ + D VAIK I + + ++ D I E + M L
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR-EGAMSEEDFIE-EAEVMMKL 59
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSY 143
SHP ++ + + + +V FM G L + + E + + L + ++Y
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAY 118
Query: 144 LHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY--- 200
L +HRD+ A N L + +K++DFG++ + + + T GT +
Sbjct: 119 LEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------TSSTGTKFPVK 169
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYE 259
W +PEV S + YS K+D+WSFG+ E+ + G+ P + ++ ++ FR
Sbjct: 170 WASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDISTGFRLY--- 224
Query: 260 KTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
K + S ++ C + P RP+ +L++
Sbjct: 225 -------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 51/313 (16%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLSH 85
S Y+ L +IG G V+KA V A+K + ++ + + RE K + LL H
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKV-ALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 86 PNILNAH--CSFSVDSRLWVVMPFMSC-GSLQSIISSCFPD--GLPEPC--------IAI 132
N++N C P+ C GS+ + C D GL I
Sbjct: 76 ENVVNLIEICRTKAS-------PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSA--SIYEPSHHHHHGSA 190
V++ L+ L Y+H LHRD+KA N+L DG +KLADFG++ S+ + S + + +
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 191 MITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMT 250
++ T ++ PE++ Y D+W G E+ R P+ E+ L ++
Sbjct: 189 VV-----TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALIS 242
Query: 251 QRF------------RFSDYEK-------TLKIKDKNKKFSR--AFKDMVASCLDQDPSK 289
Q + YEK K+KD+ K + R D++ L DP++
Sbjct: 243 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 302
Query: 290 RPSAEKLMKHSFF 302
R ++ + H FF
Sbjct: 303 RIDSDDALNHDFF 315
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 56 VAIKAIDLDQSR--TDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRL----WVVMPFMS 109
VA+K + D +R + RRE + + L+HP I+ + + ++ ++VM ++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 110 CGSLQSIISSCFPDGLPEPCIAI-VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
+L+ I+ + +G P AI V+ + AL++ H G +HRDVK NI+ + +VK
Sbjct: 117 GVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 173
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ +I + + +A+I GT +++PE R + ++D++S G E
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVI----GTAQYLSPEQARGDS-VDARSDVYSLGCVLYE 228
Query: 229 LAHGRPPLS 237
+ G PP +
Sbjct: 229 VLTGEPPFT 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSRTDL-----DSIRRETKTMSL 82
Y I +E+G G AIV K C + + A K I QSR + I RE +
Sbjct: 14 YDIGEELGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ HPNI+ H + + + +++ +S G L ++ + L E +K+ L ++
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVN 129
Query: 143 YLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH + H D+K NI L D + +KL DFG++ H ++ GT
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGT 181
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD- 257
P ++APE++ ++ +AD+WS G+ L G P +++L + F +
Sbjct: 182 PEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 240
Query: 258 -YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ +T S KD + L ++ KR + ++ ++H +
Sbjct: 241 FFSQT----------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 34 EIGVGVSAIVYKAICIPM----DSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G V+ A C + D +VA+KA+ D + +RE + ++ L H +I+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK-DPTLAARKDFQREAELLTNLQHEHIV 80
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD------GLPEPC--------IAIVLK 135
+ L +V +M G L + + PD G P + +
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ S + YL +Q +HRD+ N L ++ VK+ DFG+S +Y ++ G M+
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFR 254
WM PE I + ++ ++D+WSFG+ E+ +G+ P L ++ +TQ
Sbjct: 201 -----WMPPESI-MYRKFTTESDVWSFGVILWEIFTYGKQPWFQL-SNTEVIECITQG-- 251
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
++ ++ + + D++ C ++P +R + +++ K
Sbjct: 252 --------RVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
++ L +V+ M+ G L+ I G PE E L LH + ++RD
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+K NIL D G ++++D G++ + E I GT +MAPEV+++ Y
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPE--------GQTIKGRVGTVGYMAPEVVKNER-Y 362
Query: 214 SFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLK--IKDKNKKF 271
+F D W+ G E+ G+ P + ++ + + E+ +K ++ +++F
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQ----------QRKKKIKREEVERLVKEVPEEYSERF 412
Query: 272 SRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKNCN 306
S + + + L +DP++R SA ++ +H FK N
Sbjct: 413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 41/308 (13%)
Query: 3 HHEQEDQCSSTGTIAQKIQYP-LDPS--------SYKILDEIGVGVSAIVYKAICIPMDS 53
H Q + S G ++ +Q P DPS S++ L +G G V+K + D
Sbjct: 24 HQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFK-VRSKEDG 82
Query: 54 TVVAIKAIDLDQSRTDLDSIRRETKTMS---LLSHPNILNAHCSFSVDSRLWVVMPFMSC 110
+ A+K + R D R+ + S + HP + ++ L++ C
Sbjct: 83 RLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL--C 139
Query: 111 GSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLA 170
G + LPE + L++TL AL++LH+QG +H DVK NI G KL
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLG 199
Query: 171 DFGVSASIYEPSHHHHHGSAMITDMA-GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL 229
DFG+ + G+A ++ G P +MAPE+++ Y AD++S G+T LE+
Sbjct: 200 DFGLLVEL---------GTAGAGEVQEGDPRYMAPELLQGS--YGTAADVFSLGLTILEV 248
Query: 230 AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
A LP ++ Q + ++ L S + ++ L+ DP
Sbjct: 249 ACN----MELPHGGEGWQQLRQGYLPPEFTAGL---------SSELRSVLVMMLEPDPKL 295
Query: 290 RPSAEKLM 297
R +AE L+
Sbjct: 296 RATAEALL 303
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HRD+ A N + D +VK+ DFG++ I E G ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-----P 195
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 251
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P+ RP+
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPNMRPT 278
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + +++V +M+ GS
Sbjct: 39 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGS 95
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 155
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 156 GLARLIEDNEWTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 208
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 209 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 257
Query: 292 SAEKL 296
+ E L
Sbjct: 258 TFEYL 262
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 75
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 135 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 194 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 42/288 (14%)
Query: 22 YPLDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
+ +DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVM 64
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKE 136
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 65 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KD 119
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + + GS
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-- 177
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF+
Sbjct: 178 ----WSPPEVLM-YSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFT 217
Query: 257 DYEKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+ E I + + S ++ SC + +RP+ + L+ +
Sbjct: 218 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 265
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 13 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 72
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 73 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 131
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 132 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 190
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 191 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 94 SFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRD 153
++ L +V+ M+ G L+ I G PE E L LH + ++RD
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 154 VKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGY 213
+K NIL D G ++++D G++ + E I GT +MAPEV+++ Y
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPE--------GQTIKGRVGTVGYMAPEVVKNER-Y 362
Query: 214 SFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLK--IKDKNKKF 271
+F D W+ G E+ G+ P + ++ + + E+ +K ++ +++F
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQ----------QRKKKIKREEVERLVKEVPEEYSERF 412
Query: 272 SRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKNCN 306
S + + + L +DP++R SA ++ +H FK N
Sbjct: 413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L ++ +E + M L H ++ + S + + +V +MS GS
Sbjct: 32 TTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIXIVTEYMSKGS 88
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + S ++Y+ ++HRD++A NIL + K+ADF
Sbjct: 89 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 148
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AH 231
G++ I + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 149 GLARLIEDNEXTARQGAKFPIK------WTAPEAA-LYGRFTIKSDVWSFGILLTELTTK 201
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P M R E+ ++ + + D++ C ++P +RP
Sbjct: 202 GRVPYPG----------MVNREVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERP 250
Query: 292 SAEKL 296
+ E L
Sbjct: 251 TFEYL 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 14 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 73
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 74 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 133 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 191
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 192 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 235
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 22 YPLDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
+ +DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVM 57
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKE 136
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 58 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KD 112
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + + GS
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-- 170
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF+
Sbjct: 171 ----WSPPEVLM-YSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFT 210
Query: 257 DYEKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLM 297
+ E I + + S ++ SC + +RP+ + L+
Sbjct: 211 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 256
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 31 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 141
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVT 193
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
Y+ APEVI GY D+WS G E+
Sbjct: 194 RYYRAPEVILG-MGYKENVDLWSVGCIMGEMV 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HRD+ A N + D +VK+ DFG++ I E G ++
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-----P 192
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 193 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 248
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P RP+
Sbjct: 249 --------DQPDNCPERVTDLMRMCWQFNPKMRPT 275
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 8 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 67
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 68 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 126
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 127 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 185
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 186 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VA+K + Q++T RE + ++
Sbjct: 24 YQQLKPIGSGAQGIV----CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI++ F+ L ++VM M Q I L ++ +L + L
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQML 134
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + + M+T T
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------ASTNFMMTPYVVT 186
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHG 232
Y+ APEVI GY DIWS G EL G
Sbjct: 187 RYYRAPEVILG-MGYKENVDIWSVGCIMGELVKG 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 22 YPLDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
+ +DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVM 58
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKE 136
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KD 113
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + + GS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-- 171
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF+
Sbjct: 172 ----WSPPEVLM-YSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFT 211
Query: 257 DYEKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLM 297
+ E I + + S ++ SC + +RP+ + L+
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 15 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 74
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 75 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 134 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 192
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 193 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 236
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 20 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 130
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+T T
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMTPYVVT 182
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
Y+ APEVI GY D+WS G E+
Sbjct: 183 RYYRAPEVILG-MGYKENVDLWSVGCIMGEMV 213
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 42/288 (14%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL---- 83
Y++ ++IGVG ++ + I + A+K ID S R T+ + +L
Sbjct: 23 GYEVKEDIGVGSYSVCKRCIHKATNXEF-AVKIID--------KSKRDPTEEIEILLRYG 73
Query: 84 SHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALS 142
HPNI+ + ++VV G L I+ F E + VL +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVE 130
Query: 143 YLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH QG +HRD+K NIL S + S+++ DFG + + + ++ T
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLXTPCYT 183
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLP---PEKSLLMKMTQRFRF 255
++APEV+ GY DIWS G+ G P ++ P PE+ L + +F
Sbjct: 184 ANFVAPEVLERQ-GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 256 S-DYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
S Y ++ S KD+V+ L DP +R +A +++H +
Sbjct: 243 SGGYWNSV---------SDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 11 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 70
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 71 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 129
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 130 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 188
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 189 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 75
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 135 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 194 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 31 ILDEIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHP 86
+L E+G G +VY+ I T VA+K ++ S + E M +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-----GLPEPCIAIVLK---ETL 138
+++ S VVM M+ G L+S + S P+ G P P + +++ E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
++YL+ + +HRD+ A N + D +VK+ DFG++ I E G ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-----P 195
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSD 257
WMAPE ++ ++ +D+WSFG+ E+ P L E+ L M +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--- 251
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
D+ D++ C +P RP+
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPT 278
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 23/276 (8%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIK--AIDLDQSRTDL-DSIRRETKTMSLLSHPNIL 89
++ G G +VYK +++T VA+K A +D + +L +E K + H N++
Sbjct: 28 NKXGEGGFGVVYKGY---VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 90 NAHCSFSVDSR-LWVVMPFMSCGSLQSIISSCFPDGLPEPCI---AIVLKETLSALSYLH 145
FS D L +V + GSL +S C DG P + + + +++LH
Sbjct: 85 EL-LGFSSDGDDLCLVYVYXPNGSLLDRLS-CL-DGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
H+HRD+K+ NIL D + K++DFG++ + + + + + GT + APE
Sbjct: 142 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-----XVXXSRIVGTTAYXAPE 196
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLS-HLPPEKSLLMKMTQRFRFSDYEKTL-- 262
+R + K+DI+SFG+ LE+ G P + H P+ L +K E +
Sbjct: 197 ALRGEI--TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 254
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
K D + A + + CL + +KRP +K+ +
Sbjct: 255 KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 127/295 (43%), Gaps = 48/295 (16%)
Query: 29 YKILDEIGVG----VSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL- 83
Y + + IGVG V+KA + A+K ID S R ++ + +L
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEY-----AVKVID--------KSKRDPSEEIEILL 75
Query: 84 ---SHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLS 139
HPNI+ + +++V M G L I+ F E + VL
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGK 132
Query: 140 ALSYLHNQGHLHRDVKAGNILS-DSDGS---VKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ YLH+QG +HRD+K NIL D G+ +++ DFG + + + ++
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTP 185
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLP---PEKSLLMKMTQR 252
T ++APEV++ GY DIWS GI + G P ++ P PE+ L + +
Sbjct: 186 CYTANFVAPEVLKRQ-GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
F S S KD+V+ L DP +R +A+++++H + +K
Sbjct: 245 FTLSG--------GNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 24 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 79
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 80 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + + G+ W APE
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPE 190
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 191 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 16/221 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAID-LDQ-SRTDLDSIRRETKTMS 81
L ++IL IG G + V + + V A+K ++ D R ++ R E +
Sbjct: 58 LQRDDFEILKVIGRGAFSEV-AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLV 116
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
I H +F ++ L++VM + G L +++S F + +P L E + A+
Sbjct: 117 NGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAI 175
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+H G++HRD+K NIL D G ++LADFG + G+ GTP +
Sbjct: 176 DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL------RADGTVRSLVAVGTPDY 229
Query: 202 MAPEVIRSHTGYSF------KADIWSFGITALELAHGRPPL 236
++PE++++ G + D W+ G+ A E+ +G+ P
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 34 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 93
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 94 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 152
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 153 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 211
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 212 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSR--LWVVMPFMSCGSL 113
VA+K I D + + E M+ L H N++ V+ + L++V +M+ GSL
Sbjct: 219 VAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSL 274
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
+ S L C+ + A+ YL +HRD+ A N+L D K++DFG
Sbjct: 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 334
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHG 232
++ E S G + W APE +R +S K+D+WSFGI E+ + G
Sbjct: 335 LTK---EASSTQDTGKLPVK-------WTAPEALREKK-FSTKSDVWSFGILLWEIYSFG 383
Query: 233 RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
R P +P L + R EK K+ D A D++ +C D + RP+
Sbjct: 384 RVPYPRIP-----LKDVVPRV-----EKGYKM-DAPDGCPPAVYDVMKNCWHLDAATRPT 432
Query: 293 AEKL 296
+L
Sbjct: 433 FLQL 436
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 35 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 94
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 95 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 153
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHG 188
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ ++ H
Sbjct: 154 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 212
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
T WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 213 K---TGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 256
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
S K++ +G G V+ +ST VA+K L + + E M L H
Sbjct: 14 SIKLVKRLGAGQFGEVWMGYY--NNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDK 69
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
++ + + + ++++ +M+ GSL + S + P + + ++Y+ +
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVI 207
++HRD++A N+L K+ADFG++ I + + G+ W APE I
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK------WTAPEAI 183
Query: 208 RSHTGYSFKADIWSFGITALELA-HGRPPLSHLPPEKS---LLMKMTQRFRFSDYEK--- 260
+ ++ K+D+WSFGI E+ +G+ P P ++ ++ ++Q +R E
Sbjct: 184 -NFGCFTIKSDVWSFGILLYEIVTYGKIPY----PGRTNADVMTALSQGYRMPRVENCPD 238
Query: 261 ----TLKIKDKNKKFSRAFKDMVASCLD 284
+K+ K K R D + S LD
Sbjct: 239 ELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 9 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 64
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 65 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + + G+ W APE
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPE 175
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 176 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 19 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 74
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 75 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + + G+ W APE
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPE 185
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 186 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDL--DQSRTDLDSIRRETKTMSLLSHP 86
YKI+D++G G + VY A ++ V AIKAI + + L RE S LSH
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 87 NILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
NI++ D ++VM ++ +L I S P L + L + + H+
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAHD 129
Query: 147 QGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
+HRD+K NIL DS+ ++K+ DFG++ ++ E S + GT + +PE
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS------LTQTNHVLGTVQYFSPEQ 183
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLS 237
+ DI+S GI E+ G PP +
Sbjct: 184 AKGEATDEC-TDIYSIGIVLYEMLVGEPPFN 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 455
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 456 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESKRFV 513
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 566
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G + V+ T VA+K+ L Q D+ E M L H
Sbjct: 14 TLKLVERLGAGQAGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK------WTAPE 180
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 20 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 75
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + + G+ W APE
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPE 186
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 187 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 42/288 (14%)
Query: 22 YPLDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
+ +DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVM 73
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKE 136
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KD 128
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + + GS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-- 186
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF+
Sbjct: 187 ----WSPPEVLM-YSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFT 226
Query: 257 DYEKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+ E I + + S ++ SC + +RP+ + L+ +
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 48/296 (16%)
Query: 28 SYKILDEIGVG----VSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLL 83
Y + + IGVG V+KA + A+K ID S R ++ + +L
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEY-----AVKVID--------KSKRDPSEEIEIL 74
Query: 84 ----SHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETL 138
HPNI+ + +++V M G L I+ F E + VL
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIG 131
Query: 139 SALSYLHNQGHLHRDVKAGNILS-DSDGS---VKLADFGVSASIYEPSHHHHHGSAMITD 194
+ YLH+QG +HRD+K NIL D G+ +++ DFG + + + ++
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMT 184
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLP---PEKSLLMKMTQ 251
T ++APEV++ GY DIWS GI + G P ++ P PE+ L +
Sbjct: 185 PCYTANFVAPEVLKRQ-GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
Query: 252 RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
+F S S KD+V+ L DP +R +A+++++H + +K
Sbjct: 244 KFTLSG--------GNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 23/293 (7%)
Query: 12 STGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD 71
+TG + I + D Y + +IG G + + + + +VA+K I+ + +
Sbjct: 7 TTGPLDMPIMH--DSDRYDFVKDIGSGNFGVA-RLMRDKLTKELVAVKYIERGAAIDE-- 61
Query: 72 SIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIA 131
+++RE L HPNI+ + L ++M + S G L I C E
Sbjct: 62 NVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDEAR 119
Query: 132 IVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS--VKLADFGVSASIYEPSHHHHHGS 189
++ LS +SY H+ HRD+K N L D + +K+ DFG S S S H
Sbjct: 120 FFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPK 175
Query: 190 AMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM 249
+ + GTP ++APEV+ AD+WS G+T + G P P E K
Sbjct: 176 STV----GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED-PEEPRDYRKT 230
Query: 250 TQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
QR Y I D + + S +++ DP+ R S ++ HS+F
Sbjct: 231 IQRILSVKY----SIPD-DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGS 112
+T VAIK L +S E + M L H ++ + S + +++V +M+ GS
Sbjct: 33 NTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS-EEPIYIVTEYMNKGS 89
Query: 113 LQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADF 172
L + L P + + + + ++Y+ ++HRD+++ NIL + K+ADF
Sbjct: 90 LLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADF 149
Query: 173 GVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA-H 231
G++ I + G+ W APE + ++ K+D+WSFGI EL
Sbjct: 150 GLARLIEDNEXTARQGAKFPIK------WTAPEAAL-YGRFTIKSDVWSFGILLTELVTK 202
Query: 232 GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
GR P + + +L ++ + +R + + +++ C +DP +RP
Sbjct: 203 GRVPYPGM-NNREVLEQVERGYRMPCPQDC----------PISLHELMIHCWKKDPEERP 251
Query: 292 SAEKLMKHSFFKN 304
+ E L SF ++
Sbjct: 252 TFEYL--QSFLED 262
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSCG 111
+ VA+K + T+ +++ E K +S L +H NI+N + ++ V+ + G
Sbjct: 69 AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 128
Query: 112 SLQSIIS---SCFPDGLPEPCIAIVLK-------------ETLSALSYLHNQGHLHRDVK 155
L + + F P I + + +++L ++ +HRD+
Sbjct: 129 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 188
Query: 156 AGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSF 215
A NIL K+ DFG++ I S++ G+A + WMAPE I + Y+F
Sbjct: 189 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-----WMAPESIFNCV-YTF 242
Query: 216 KADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRA 274
++D+WS+GI EL + G P +P + + + FR E
Sbjct: 243 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA----------PAE 292
Query: 275 FKDMVASCLDQDPSKRPSAEKLMK 298
D++ +C D DP KRP+ +++++
Sbjct: 293 MYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 24 LDPS------SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRET 77
+DP+ S K++ ++G G V+ +ST VA+K L + + E
Sbjct: 3 MDPAWEIPRESIKLVKKLGAGQFGEVWMGYY--NNSTKVAVKT--LKPGTMSVQAFLEEA 58
Query: 78 KTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKET 137
M L H ++ + + + ++++ FM+ GSL + S + P + +
Sbjct: 59 NLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI 118
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
++Y+ + ++HRD++A N+L K+ADFG++ I + + G+
Sbjct: 119 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK--- 175
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELA-HGRPP 235
W APE I + ++ K+++WSFGI E+ +G+ P
Sbjct: 176 ---WTAPEAI-NFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 14 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + + G+ W APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPE 180
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 42/284 (14%)
Query: 24 LDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSL 82
+DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVMMN 55
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKETL 138
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVC 110
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + + GS
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR---- 166
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF++
Sbjct: 167 --WSPPEVLM-YSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFTNS 208
Query: 259 EKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLM 297
E I + + S ++ SC + +RP+ + L+
Sbjct: 209 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 252
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSCG 111
+ VA+K + T+ +++ E K +S L +H NI+N + ++ V+ + G
Sbjct: 76 AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 135
Query: 112 SLQSIIS---SCFPDGLPEPCIAIVLK-------------ETLSALSYLHNQGHLHRDVK 155
L + + F P I + + +++L ++ +HRD+
Sbjct: 136 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 195
Query: 156 AGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSF 215
A NIL K+ DFG++ I S++ G+A + WMAPE I + Y+F
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-----WMAPESIFNCV-YTF 249
Query: 216 KADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRA 274
++D+WS+GI EL + G P +P + + + FR E
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA----------PAE 299
Query: 275 FKDMVASCLDQDPSKRPSAEKLMK 298
D++ +C D DP KRP+ +++++
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 43/309 (13%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLD-SIRRETKTMSLLSH 85
S Y+ L +IG G V+KA V A+K + ++ + + RE K + LL H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKV-ALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 86 PNILN--------AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPD-GLPEPCIAIVLKE 136
N++N A + +++V F L ++S+ L E I V++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCE-HDLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSA--SIYEPSHHHHHGSAMITD 194
L+ L Y+H LHRD+KA N+L DG +KLADFG++ S+ + S + + + ++
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-- 191
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF- 253
T ++ PE++ Y D+W G E+ R P+ E+ L ++Q
Sbjct: 192 ---TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCG 247
Query: 254 -----------RFSDYEK-------TLKIKDKNKKFSR--AFKDMVASCLDQDPSKRPSA 293
+ YEK K+KD+ K + R D++ L DP++R +
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS 307
Query: 294 EKLMKHSFF 302
+ + H FF
Sbjct: 308 DDALNHDFF 316
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 34 EIGVGVSAIVYKAIC---IP-MDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G V+ A C +P D +VA+KA+ + S + +RE + +++L H +I+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIV 77
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG---------LPEPC----IAIVLKE 136
+ L +V +M G L + S PD P P + V +
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
+ + YL +HRD+ N L VK+ DFG+S IY ++ G M+
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR- 196
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHL 239
WM PE I + ++ ++D+WSFG+ E+ +G+ P L
Sbjct: 197 ----WMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSCG 111
+ VA+K + T+ +++ E K +S L +H NI+N + ++ V+ + G
Sbjct: 71 AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 130
Query: 112 SLQSIIS---SCFPDGLPEPCIAIVLK-------------ETLSALSYLHNQGHLHRDVK 155
L + + F P I + + +++L ++ +HRD+
Sbjct: 131 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 190
Query: 156 AGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSF 215
A NIL K+ DFG++ I S++ G+A + WMAPE I + Y+F
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-----WMAPESIFNCV-YTF 244
Query: 216 KADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRA 274
++D+WS+GI EL + G P +P + + + FR E
Sbjct: 245 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA----------PAE 294
Query: 275 FKDMVASCLDQDPSKRPSAEKLMK 298
D++ +C D DP KRP+ +++++
Sbjct: 295 MYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 34 EIGVGVSAIVYKAIC---IP-MDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G V+ A C +P D +VA+KA+ + S + +RE + +++L H +I+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIV 83
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG---------LPEPC----IAIVLKE 136
+ L +V +M G L + S PD P P + V +
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
+ + YL +HRD+ N L VK+ DFG+S IY ++ G M+
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR- 202
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHL 239
WM PE I + ++ ++D+WSFG+ E+ +G+ P L
Sbjct: 203 ----WMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 34 EIGVGVSAIVYKAIC---IP-MDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G V+ A C +P D +VA+KA+ + S + +RE + +++L H +I+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIV 106
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG---------LPEPC----IAIVLKE 136
+ L +V +M G L + S PD P P + V +
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
+ + YL +HRD+ N L VK+ DFG+S IY ++ G M+
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR- 225
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHL 239
WM PE I + ++ ++D+WSFG+ E+ +G+ P L
Sbjct: 226 ----WMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 264
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 29/277 (10%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHC 93
EIG G VYK + V + D ++++ + E + + L HPNI+ +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 94 SF--SVDSRLWVVM--PFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGH 149
S+ +V + +V+ + G+L++ + + + ++ L L +LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQILKGLQFLHTRTP 150
Query: 150 --LHRDVKAGNI-LSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV 206
+HRD+K NI ++ GSVK+ D G+ A++ S A+I GTP + APE
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGL-ATLKRAS----FAKAVI----GTPEFXAPEX 201
Query: 207 IRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKD 266
Y D+++FG LE A P S + ++T + + ++K + I +
Sbjct: 202 YEEK--YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDK-VAIPE 258
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
K+++ C+ Q+ +R S + L+ H+FF+
Sbjct: 259 --------VKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 15 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 74
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 75 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + YL ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 134 LIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHN 192
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 193 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 236
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSCG 111
+ VA+K + T+ +++ E K +S L +H NI+N + ++ V+ + G
Sbjct: 76 AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 135
Query: 112 SLQSIIS---SCFPDGLPEPCIAIVLK-------------ETLSALSYLHNQGHLHRDVK 155
L + + F P I + + +++L ++ +HRD+
Sbjct: 136 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 195
Query: 156 AGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSF 215
A NIL K+ DFG++ I S++ G+A + WMAPE I + Y+F
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK-----WMAPESIFNCV-YTF 249
Query: 216 KADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRA 274
++D+WS+GI EL + G P +P + + + FR E
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA----------PAE 299
Query: 275 FKDMVASCLDQDPSKRPSAEKLMK 298
D++ +C D DP KRP+ +++++
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 63/305 (20%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G +V++A +D AIK I L + + RE K ++ L HP I+ +
Sbjct: 13 LGRGGFGVVFEAKN-KVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPE--------------PCIAIVLKETLSA 140
+ + + P L + C + L + C+ I L + A
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL-QIAEA 130
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYE-----------PSHHHHHGS 189
+ +LH++G +HRD+K NI D VK+ DFG+ ++ + P++ H G
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 190 AMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM 249
GT +M+PE I ++ YS K DI+S G+ EL + P S
Sbjct: 191 ------VGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELLY---PFS------------ 228
Query: 250 TQRFRFSDYEKTLKIKD-KNKKFSRAFKD-------MVASCLDQDPSKRPSAEKLMKHSF 301
+ E+ + D +N KF F MV L P +RP A +++++
Sbjct: 229 ------TQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV 282
Query: 302 FKNCN 306
F++ +
Sbjct: 283 FEDLD 287
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSCG 111
+ VA+K + T+ +++ E K +S L +H NI+N + ++ V+ + G
Sbjct: 53 AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 112
Query: 112 SLQSIIS---SCFPDGLPEPCIAIVLK-------------ETLSALSYLHNQGHLHRDVK 155
L + + F P I + + +++L ++ +HRD+
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 172
Query: 156 AGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSF 215
A NIL K+ DFG++ I S++ G+A + WMAPE I + Y+F
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-----WMAPESIFNCV-YTF 226
Query: 216 KADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRA 274
++D+WS+GI EL + G P +P + + + FR E
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA----------PAE 276
Query: 275 FKDMVASCLDQDPSKRPSAEKLMK 298
D++ +C D DP KRP+ +++++
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSR--LWVVMPFMSCGSL 113
VA+K I D + + E M+ L H N++ V+ + L++V +M+ GSL
Sbjct: 38 VAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSL 93
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
+ S L C+ + A+ YL +HRD+ A N+L D K++DFG
Sbjct: 94 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 153
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHG 232
++ E S G + W APE +R +S K+D+WSFGI E+ + G
Sbjct: 154 LTK---EASSTQDTGKLPVK-------WTAPEALR-EAAFSTKSDVWSFGILLWEIYSFG 202
Query: 233 RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
R P +P L + R EK K+ D A +++ +C D + RPS
Sbjct: 203 RVPYPRIP-----LKDVVPRV-----EKGYKM-DAPDGCPPAVYEVMKNCWHLDAAMRPS 251
Query: 293 AEKL 296
+L
Sbjct: 252 FLQL 255
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 12 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 126
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI+ + +K+ DFG+ +H G+ ++ G
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 178
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 179 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 238 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ I E G ++ W
Sbjct: 137 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL-----PVRW 191
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L RF
Sbjct: 192 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEG--- 241
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 242 --GLLDKPDNCPDMLLELMRMCWQYNPKMRPS 271
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 12 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 126
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI+ + +K+ DFG+ +H G+ ++ G
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 178
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 179 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 238 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 22 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 77
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 78 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 188
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 189 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 20 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 75
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 186
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 187 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSR--LWVVMPFMSCGSL 113
VA+K I D + + E M+ L H N++ V+ + L++V +M+ GSL
Sbjct: 47 VAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSL 102
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
+ S L C+ + A+ YL +HRD+ A N+L D K++DFG
Sbjct: 103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHG 232
++ E S G + W APE +R +S K+D+WSFGI E+ + G
Sbjct: 163 LTK---EASSTQDTGKLPVK-------WTAPEALREKK-FSTKSDVWSFGILLWEIYSFG 211
Query: 233 RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
R P +P L + R EK K+ D A +++ +C D + RPS
Sbjct: 212 RVPYPRIP-----LKDVVPRV-----EKGYKM-DAPDGCPPAVYEVMKNCWHLDAAMRPS 260
Query: 293 AEKL 296
+L
Sbjct: 261 FLQL 264
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 42/288 (14%)
Query: 22 YPLDPSSYKILDEIGVGVSAIV-YKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTM 80
+ +DP L E+G G +V Y D VAIK I + D E K M
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK--EGSMSEDEFIEEAKVM 73
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF----PDGLPEPCIAIVLKE 136
LSH ++ + + ++++ +M+ G L + + L E C K+
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KD 128
Query: 137 TLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMA 196
A+ YL ++ LHRD+ A N L + G VK++DFG+S + + GS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-- 186
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS 256
W PEV+ ++ +S K+DIW+FG+ E+ L +P E RF+
Sbjct: 187 ----WSPPEVLM-YSKFSSKSDIWAFGVLMWEIY----SLGKMPYE-----------RFT 226
Query: 257 DYEKTLKIKDKNKKF-----SRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+ E I + + S ++ SC + +RP+ + L+ +
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI+ + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 23 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 78
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 79 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 189
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 190 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 72
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 73 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 183
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGKFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI+ + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 77
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 78 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 135
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 188
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 78
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 79 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 136
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 189
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 190 RRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+ T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMEPEVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
Y+ APEVI GY DIWS G E+
Sbjct: 189 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKKC---REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPAFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 15 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 70
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 71 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 181
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 182 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 14 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 180
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKKC---REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + +++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI L D + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 30/272 (11%)
Query: 34 EIGVGVSAIVY----KAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G +VY K + T VAIK ++ S + E M + +++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI--------VLKETLSAL 141
S V+M M+ G L+S + S P+ P +A + E +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYW 201
+YL+ +HRD+ A N + D +VK+ DFG++ I E G ++ W
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL-----PVRW 200
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALELAH-GRPPLSHLPPEKSLLMKMTQRFRFSDYEK 260
M+PE ++ ++ +D+WSFG+ E+A P L E+ L M
Sbjct: 201 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 250
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
+ DK +++ C +P RPS
Sbjct: 251 --GLLDKPDNCPDMLFELMRMCWQYNPKMRPS 280
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSR--LWVVMPFMSCGSL 113
VA+K I D + + E M+ L H N++ V+ + L++V +M+ GSL
Sbjct: 32 VAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSL 87
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
+ S L C+ + A+ YL +HRD+ A N+L D K++DFG
Sbjct: 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 147
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHG 232
++ E S G + W APE +R +S K+D+WSFGI E+ + G
Sbjct: 148 LTK---EASSTQDTGKLPVK-------WTAPEALREKK-FSTKSDVWSFGILLWEIYSFG 196
Query: 233 RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPS 292
R P +P L + R EK K+ D A +++ +C D + RPS
Sbjct: 197 RVPYPRIP-----LKDVVPRV-----EKGYKM-DAPDGCPPAVYEVMKNCWHLDAAMRPS 245
Query: 293 AEKL 296
+L
Sbjct: 246 FLQL 249
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 21/280 (7%)
Query: 25 DPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS 84
D Y+++ +IG G + + + + +VA+K I+ + + D ++++RE L
Sbjct: 16 DSDRYELVKDIGSGNFGVA-RLMRDKQSNELVAVKYIERGE-KID-ENVKREIINHRSLR 72
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ + L +VM + S G L I C E ++ +S +SY
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYC 130
Query: 145 HNQGHLHRDVKAGNILSDSDGS--VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
H HRD+K N L D + +K+ DFG S S S H + + GTP ++
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTV----GTPAYI 182
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ AD+WS G+T + G P P E K R Y
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED-PEEPKNFRKTIHRILNVQY---- 237
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I D S + +++ DP+KR S ++ H +F
Sbjct: 238 AIPDY-VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 16 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 71
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 72 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 182
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 183 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 24 LDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAIDLDQSRTDLDSIRRETKTMS 81
LD S KI IG G + + +P V VAIK + + + E M
Sbjct: 40 LDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMG 99
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSA 140
HPN+++ + + +V+ FM G+L + + DG + +L+ +
Sbjct: 100 QFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK--HDGQFTVIQLVGMLRGIAAG 157
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG-TP 199
+ YL + G++HRD+ A NIL +S+ K++DFG+S I + A+ T G P
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE------AVYTTTGGKIP 211
Query: 200 Y-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
W APE I+ + ++ +D+WS+GI E +++G P
Sbjct: 212 VRWTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 75
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 76 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 186
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 38/280 (13%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSI------RRETKTMSLLSHPN 87
+IG G +V+K + D +VVAIK++ L S + + I +RE MS L+HPN
Sbjct: 26 QIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
I+ + R+ VM F+ CG L ++ P + ++ + + Y+ N
Sbjct: 85 IVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQN 140
Query: 147 QGH--LHRDVKAGNIL---SDSDGSV--KLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
Q +HRD+++ NI D + V K+ADFG+S + S H ++ + G
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHS------VSGLLGNF 190
Query: 200 YWMAPEVIRS-HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
WMAPE I + Y+ KAD +SF + + G P K + M +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR------- 243
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
E+ L+ R ++++ C DP KRP ++K
Sbjct: 244 EEGLRPTIPEDCPPR-LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 80
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 81 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 138
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 191
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 103
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 104 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 161
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 214
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 215 RRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 75
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 76 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + +++ + WMAPE I +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 186
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 14 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HRD++A NIL S K+ADFG++ I + G+ W APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPE 180
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
+ K+++ +G G V+ T VA+K+ L Q D+ E M L H
Sbjct: 10 TLKLVERLGAGQFGEVWMGYY--NGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQR 65
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV--LKETLSALSYLH 145
++ + + + ++++ +M GSL + + P G+ ++ + ++++
Sbjct: 66 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+ ++HR+++A NIL S K+ADFG++ I + + G+ W APE
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPE 176
Query: 206 VIRSHTGYSFKADIWSFGITALELA-HGRPP 235
I T ++ K+D+WSFGI E+ HGR P
Sbjct: 177 AINYGT-FTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPE 127
D + ++ E M+ L H N++ + +F + + +VM ++ G L II + L E
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY--NLTE 186
Query: 128 PCIAIVLKETLSALSYLHNQGHLHRDVKAGNILS-DSDG-SVKLADFGVSASIYEPSHHH 185
+ +K+ + ++H LH D+K NIL + D +K+ DFG+ A Y+P
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGL-ARRYKPREK- 244
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSL 245
+ GTP ++APEV+ ++ SF D+WS G+ A L G P ++L
Sbjct: 245 ------LKVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
Query: 246 LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+ R+ D E + S K+ ++ L ++ S R SA + +KH + +
Sbjct: 298 NNILACRWDLEDEE--------FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 455
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 456 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESKRFV 513
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L + VKL DFG+S + + +++ + WMAPE I +
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 566
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSI------RRETKTMSLLSHPN 87
+IG G +V+K + D +VVAIK++ L S + + I +RE MS L+HPN
Sbjct: 26 QIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
I+ + R+ VM F+ CG L ++ P + ++ + + Y+ N
Sbjct: 85 IVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQN 140
Query: 147 QGH--LHRDVKAGNIL---SDSDGSV--KLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
Q +HRD+++ NI D + V K+ADFG S + S H ++ + G
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHS------VSGLLGNF 190
Query: 200 YWMAPEVIRS-HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
WMAPE I + Y+ KAD +SF + + G P K + M +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR------- 243
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
E+ L+ R ++++ C DP KRP ++K
Sbjct: 244 EEGLRPTIPEDCPPR-LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 28/171 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 168
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 224
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNC 305
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 225 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 36/296 (12%)
Query: 34 EIGVGVSAIVYKA----ICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNIL 89
E+G G V+ A +C D +VA+K + D S RE + ++ L H +I+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIV 78
Query: 90 NAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-----------LPEPCIAIVLKETL 138
+ L +V +M G L + + PD L + + + ++
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ + YL +Q +HRD+ N L + VK+ DFG+S +Y ++ G M+
Sbjct: 139 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR--- 195
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
WM PE I + ++ ++D+WS G+ E+ +G+ P L ++ +TQ
Sbjct: 196 --WMPPESI-MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-SNNEVIECITQG----- 246
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFV 313
++ + + + +++ C ++P R + + + H+ +N K ++
Sbjct: 247 -----RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLAKASPVYL 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 17 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 76
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 77 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 136 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 194
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 195 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 238
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMSLLS 84
Y+ L IG G IV C D+ + VAIK + Q++T RE M ++
Sbjct: 26 YQNLKPIGSGAQGIV----CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 85 HPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
H NI+ F+ L ++VM M Q I L ++ +L + L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
+ +LH+ G +HRD+K NI+ SD ++K+ DFG++ + S M+ T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTSFMMEPEVVT 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
Y+ APEVI GY D+WS G E+
Sbjct: 189 RYYRAPEVILG-MGYKENVDLWSVGCIMGEMV 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D + +G G V +A +D T VA+K +
Sbjct: 9 DEHCERLPYDASKWEFPRD--RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 63 LDQSRTDLDSIRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
+ ++ ++ E K + + H N+L A C+ L V++ F G+L + +
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVIVEFCKFGNLSTYLR 124
Query: 119 S----------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
S + D L + + + +L ++ +HRD+ A NIL VK
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVK 184
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ IY+ + G A + WMAPE I Y+ ++D+WSFG+ E
Sbjct: 185 IXDFGLARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVLLWE 238
Query: 229 L-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQ 285
+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 239 IFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTT-----------PEMYQTML-DCWHG 286
Query: 286 DPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 287 EPSQRPTFSELVEH 300
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 75
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 135 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 194 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 21/280 (7%)
Query: 25 DPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS 84
D Y+++ +IG G + + + + +VA+K I+ + +++RE L
Sbjct: 17 DSDRYELVKDIGSGNFGVA-RLMRDKQSNELVAVKYIE--RGEKIAANVKREIINHRSLR 73
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ + L +VM + S G L I C E ++ +S +SY
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYC 131
Query: 145 HNQGHLHRDVKAGNILSDSDGS--VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
H HRD+K N L D + +K+ DFG S S S H + + GTP ++
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTV----GTPAYI 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ AD+WS G+T + G P P E K R Y
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED-PEEPKNFRKTIHRILNVQY---- 238
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I D S + +++ DP+KR S ++ H +F
Sbjct: 239 AIPDY-VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 75
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 135 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 194 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 237
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G V KA +DS AIK I + L +I E ++ L+H ++ + +
Sbjct: 14 LGQGAFGQVVKARN-ALDSRYYAIKKIR--HTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 95 F-------------SVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ S L++ + +L +I S + + + ++ L AL
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL-FRQILEAL 129
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP-------SHHHHHGSAMITD 194
SY+H+QG +HR++K NI D +VK+ DFG++ +++ S + S +T
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT ++A EV+ Y+ K D +S GI E + P S ++L K+
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKL----- 241
Query: 255 FSDYEKTLKIK-----DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
+++ I+ D NK + K ++ +D DP+KRP A L+ +
Sbjct: 242 -----RSVSIEFPPDFDDNK--XKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 14 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 73
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 74 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 133 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 191
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 192 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 135/317 (42%), Gaps = 45/317 (14%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 46 DEHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 103
Query: 63 LDQSRTDLDSIRRETKTMSLLSH-PNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISS 119
+ ++ ++ E K + + H N++N C+ L V++ F G+L + + S
Sbjct: 104 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-KPGGPLMVIVEFCKFGNLSTYLRS 162
Query: 120 --------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDG 165
+ D L + + + +L ++ +HRD+ A NIL
Sbjct: 163 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 222
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ IY+ + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 223 VVKICDFGLARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVL 276
Query: 226 ALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASC 282
E+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 277 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DC 324
Query: 283 LDQDPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 325 WHGEPSQRPTFSELVEH 341
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D + +G G V +A +D T VA+K +
Sbjct: 9 DEHCERLPYDASKWEFPRD--RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 63 LDQSRTDLDSIRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
+ ++ ++ E K + + H N+L A C+ L V++ F G+L + +
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVIVEFCKFGNLSTYLR 124
Query: 119 S----------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
S + D L + + + +L ++ +HRD+ A NIL VK
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVK 184
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ IY+ + G A + WMAPE I Y+ ++D+WSFG+ E
Sbjct: 185 ICDFGLARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVLLWE 238
Query: 229 L-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQ 285
+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 239 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DCWHG 286
Query: 286 DPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 287 EPSQRPTFSELVEH 300
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 171
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 227
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 228 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 135/317 (42%), Gaps = 45/317 (14%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 11 DEHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 68
Query: 63 LDQSRTDLDSIRRETKTMSLLSH-PNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISS 119
+ ++ ++ E K + + H N++N C+ L V++ F G+L + + S
Sbjct: 69 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-KPGGPLMVIVEFCKFGNLSTYLRS 127
Query: 120 --------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDG 165
+ D L + + + +L ++ +HRD+ A NIL
Sbjct: 128 KRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 187
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ IY+ + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 188 VVKICDFGLARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVL 241
Query: 226 ALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASC 282
E+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 242 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DC 289
Query: 283 LDQDPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 290 WHGEPSQRPTFSELVEH 306
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 21 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 80
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 81 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 139
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 140 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 198
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 199 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 242
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 28/240 (11%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSH 85
P +Y I IG G VY A + V K + + D I RE ++ L
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 84
Query: 86 PNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
I+ + D L++V+ ++ L+ + + P L E I +L L
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKT--PIFLTEEHIKTILYNLLLG 141
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIY---------------EPSHHH 185
+++H G +HRD+K N L + D SVK+ DFG++ +I EP H+
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-----AHGRPPLSHLP 240
+ +T T ++ APE+I Y+ DIWS G EL +H P + P
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 33/286 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRT-------DLDSIRRETKTMS 81
Y +E+G G A+V K C ST + A + + RT + I RE +
Sbjct: 13 YDTGEELGSGQFAVVKK--C-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
+ HPN++ H + + + ++ ++ G L ++ + L E LK+ L+ +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE--KESLTEEEATEFLKQILNGV 127
Query: 142 SYLHNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
YLH+ H D+K NI+ + +K+ DFG+ +H G+ ++ G
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-------AHKIDFGNEF-KNIFG 179
Query: 198 TPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD 257
TP ++APE++ ++ +AD+WS G+ L G P +++L + F D
Sbjct: 180 TPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 258 YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ S KD + L +DP KR + + ++H + K
Sbjct: 239 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 33/251 (13%)
Query: 56 VAIKAIDLDQ-SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRL-------WVVMPF 107
VA+K + D + +D++ RE M HP++ S+ SR V++PF
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL-VGVSLRSRAKGRLPIPMVILPF 112
Query: 108 MSCGSLQSIISSCF----PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS 163
M G L + + + P LP + + + + YL ++ +HRD+ A N +
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE 172
Query: 164 DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSF 222
D +V +ADFG+S IY ++ G A + P W+A E + + Y+ +D+W+F
Sbjct: 173 DMTVCVADFGLSRKIYS-GDYYRQGCA-----SKLPVKWLALESLADNL-YTVHSDVWAF 225
Query: 223 GITALE-LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVAS 281
G+T E + G+ P + + + + + + LK + + D++
Sbjct: 226 GVTMWEIMTRGQTPYAGI--------ENAEIYNYLIGGNRLK---QPPECMEEVYDLMYQ 274
Query: 282 CLDQDPSKRPS 292
C DP +RPS
Sbjct: 275 CWSADPKQRPS 285
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 172
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 228
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 229 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 168
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 224
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 225 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 173
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 229
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 230 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 172
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 228
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 229 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 195
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 251
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 252 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 75 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 134
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 135 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 193
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ +Y+ S H+
Sbjct: 194 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 252
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 253 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 296
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 187
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 243
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 244 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 47/318 (14%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 9 DEHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 63 LDQSRTDLDSIRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
+ ++ ++ E K + + H N+L A C+ L V++ F G+L + +
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVIVEFCKFGNLSTYLR 124
Query: 119 S--------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSD 164
S + D L + + + +L ++ +HRD+ A NIL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK 184
Query: 165 GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGI 224
VK+ DFG++ IY+ + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGV 238
Query: 225 TALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVAS 281
E+ + G P + ++ ++ + R R DY ++ M+
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-D 286
Query: 282 CLDQDPSKRPSAEKLMKH 299
C +PS+RP+ +L++H
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 215
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 271
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 272 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M L +I+ S L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKS---QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG+ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLC----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 188
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 244
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 245 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 187
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 243
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 244 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 173
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 229
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 230 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSL 113
VA+K++ + + +++E + + L H NI+ C+ + + ++M F+ GSL
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLS-------ALSYLHNQGHLHRDVKAGNILSDSDGS 166
+ LP+ I LK+ L + YL ++ ++HRD+ A N+L +S+
Sbjct: 113 KEY--------LPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ 164
Query: 167 VKLADFGVSASIYEPSHHHHHGSAMITDMAGTP-YWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ +I + D +P +W APE + Y +D+WSFG+T
Sbjct: 165 VKIGDFGLTKAIETDKE-----XXTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVT 218
Query: 226 ALEL 229
EL
Sbjct: 219 LHEL 222
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 173
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 229
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 230 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 188
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 244
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 245 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSR-----TDLDSIRRETKTMSL 82
Y I +E+G G AIV K C + + A K I QSR + I RE +
Sbjct: 14 YDIGEELGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ H N++ H + + + +++ +S G L ++ + L E +K+ L ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVN 129
Query: 143 YLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH + H D+K NI L D + +KL DFG++ H ++ GT
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGT 181
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD- 257
P ++APE++ ++ +AD+WS G+ L G P +++L + F +
Sbjct: 182 PEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 240
Query: 258 -YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+ +T S KD + L ++ KR + ++ ++H
Sbjct: 241 FFSQT----------SELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 35/285 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSR-----TDLDSIRRETKTMSL 82
Y I +E+G G AIV K C + + A K I QSR + I RE +
Sbjct: 14 YDIGEELGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ H N++ H + + + +++ +S G L ++ + L E +K+ L ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVN 129
Query: 143 YLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH + H D+K NI L D + +KL DFG++ H ++ GT
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGT 181
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD- 257
P ++APE++ ++ +AD+WS G+ L G P +++L + F +
Sbjct: 182 PEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 240
Query: 258 -YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ +T S KD + L ++ KR + ++ ++H +
Sbjct: 241 FFSQT----------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 215
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 271
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 272 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 200
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 256
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 257 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSL 113
VA+K++ + + +++E + + L H NI+ C+ + + ++M F+ GSL
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLS-------ALSYLHNQGHLHRDVKAGNILSDSDGS 166
+ LP+ I LK+ L + YL ++ ++HRD+ A N+L +S+
Sbjct: 101 KEY--------LPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ 152
Query: 167 VKLADFGVSASIYEPSHHHHHGSAMITDMAGTP-YWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ +I + D +P +W APE + Y +D+WSFG+T
Sbjct: 153 VKIGDFGLTKAIETDKE-----XXTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVT 206
Query: 226 ALEL 229
EL
Sbjct: 207 LHEL 210
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 215
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 271
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 272 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L IG G Y ++C D+ VA+K + QS RE + +
Sbjct: 26 PERYQNLSPIGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 137
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMTGY 187
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 248 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 306 QALAHAYF 313
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 207
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 263
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 264 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 220
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 276
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 277 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 27 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 138
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA----------RHTDDEMTGY 188
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 249 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 307 QALAHAYF 314
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 118/280 (42%), Gaps = 21/280 (7%)
Query: 25 DPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS 84
D Y+++ +IG G + + + + +VA+K I+ + + D ++++RE L
Sbjct: 17 DSDRYELVKDIGSGNFGVA-RLMRDKQSNELVAVKYIERGE-KID-ENVKREIINHRSLR 73
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ + L +VM + S G L I C E ++ +S +SY
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYC 131
Query: 145 HNQGHLHRDVKAGNILSDSDGS--VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
H HRD+K N L D + +K+ FG S S S H D GTP ++
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS----SVLHSQPK----DTVGTPAYI 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ AD+WS G+T + G P P E K R Y
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED-PEEPKNFRKTIHRILNVQY---- 238
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I D S + +++ DP+KR S ++ H +F
Sbjct: 239 AIPDY-VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSR-----TDLDSIRRETKTMSL 82
Y I +E+G G AIV K C + + A K I QSR + I RE +
Sbjct: 14 YDIGEELGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ H N++ H + + + +++ +S G L ++ + L E +K+ L ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVN 129
Query: 143 YLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH + H D+K NI L D + +KL DFG++ H ++ GT
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGT 181
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD- 257
P ++APE++ ++ +AD+WS G+ L G P +++L + + F +
Sbjct: 182 PEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEE 240
Query: 258 -YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+ T S KD + L ++ KR + ++ ++H
Sbjct: 241 FFSHT----------SELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 52/302 (17%)
Query: 21 QYPLDPSSYKILDEIGVGVSAIVYKAIC---IPMDS-TVVAIKAIDLDQSRTDLDSIRRE 76
+YP + Y + +IG G V++A +P + T+VA+K + + S +RE
Sbjct: 43 EYPRNNIEY--VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQRE 100
Query: 77 TKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGL----------- 125
M+ +PNI+ +V + ++ +M+ G L + S P +
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 126 -------PEP-------CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLAD 171
P P CIA ++ + ++YL + +HRD+ N L + VK+AD
Sbjct: 161 ARVSSPGPPPLSCAEQLCIA---RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD 217
Query: 172 FGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-A 230
FG+S +IY ++ G+ I WM PE I + Y+ ++D+W++G+ E+ +
Sbjct: 218 FGLSRNIYSADYYKADGNDAIPIR-----WMPPESI-FYNRYTTESDVWAYGVVLWEIFS 271
Query: 231 HGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR 290
+G P + E+ + Y + I + +++ C + P+ R
Sbjct: 272 YGLQPYYGMAHEEVIY-----------YVRDGNILACPENCPLELYNLMRLCWSKLPADR 320
Query: 291 PS 292
PS
Sbjct: 321 PS 322
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 28 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 139
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H + +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTADEMTGY 189
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 250 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 308 QALAHAYF 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 23 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 134
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA----------RHTDDEMTGY 184
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 245 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 303 QALAHAYF 310
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 28 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 139
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H + +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTADEMTGY 189
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 250 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 308 QALAHAYF 315
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 35/285 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSR-----TDLDSIRRETKTMSL 82
Y I +E+G G AIV K C + + A K I QSR + I RE +
Sbjct: 14 YDIGEELGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ H N++ H + + + +++ +S G L ++ + L E +K+ L ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVN 129
Query: 143 YLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH + H D+K NI L D + +KL DFG++ H ++ GT
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGT 181
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD- 257
P ++APE++ ++ +AD+WS G+ L G P +++L + + F +
Sbjct: 182 PEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEE 240
Query: 258 -YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSF 301
+ T S KD + L ++ KR + ++ ++H +
Sbjct: 241 FFSHT----------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 133/317 (41%), Gaps = 47/317 (14%)
Query: 8 DQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAIDL 63
+ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 1 EHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 58
Query: 64 DQSRTDLDSIRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISS 119
+ ++ ++ E K + + H N+L A C+ L V+ F G+L + + S
Sbjct: 59 GATHSEHRALMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVITEFCKFGNLSTYLRS 116
Query: 120 --------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDG 165
+ D L + + + +L ++ +HRD+ A NIL
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 176
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ IY+ + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVL 230
Query: 226 ALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASC 282
E+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DC 278
Query: 283 LDQDPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 279 WHGEPSQRPTFSELVEH 295
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 28 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 139
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H + +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTADEMTGY 189
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 250 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 308 QALAHAYF 315
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 75
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 76 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L + VKL DFG+S + + +++ + WMAPE I +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESI-NF 186
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTV-VAIKAIDLDQSR-----TDLDSIRRETKTMSL 82
Y I +E+G G AIV K C + + A K I QSR + I RE +
Sbjct: 14 YDIGEELGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 83 LSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALS 142
+ H N++ H + + + +++ +S G L ++ + L E +K+ L ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVN 129
Query: 143 YLHNQGHLHRDVKAGNI-LSDSD---GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
YLH + H D+K NI L D + +KL DFG++ H ++ GT
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGT 181
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD- 257
P ++APE++ ++ +AD+WS G+ L G P +++L + + F +
Sbjct: 182 PEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEE 240
Query: 258 -YEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
+ T S KD + L ++ KR + ++ ++H
Sbjct: 241 FFSHT----------SELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 26 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 137
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMTGY 187
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 248 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 306 QALAHAYF 313
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 137/335 (40%), Gaps = 54/335 (16%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPL--DPSSYKILDEIGVGVSAIVYKAICIPMDSTV--- 55
MAHH Q T Q++ + P Y+ L +G G Y ++C D+
Sbjct: 1 MAHHHHHSQERPT-FYRQELNKTIWEVPERYQNLSPVGSGA----YGSVCAAFDTKTGHR 55
Query: 56 VAIKAIDLD-QSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRL------WVVMPFM 108
VA+K + QS RE + + + H N++ F+ L ++V M
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 109 SCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
G+ + I C L + + ++ + L L Y+H+ +HRD+K N+ + D +K
Sbjct: 116 --GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
+ DFG++ H +T T ++ APE++ + Y+ DIWS G E
Sbjct: 172 ILDFGLA----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 229 LAHGR---PPLSHL-----------PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRA 274
L GR P H+ P LL K++ +Y ++L K F+
Sbjct: 222 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE-SARNYIQSLAQMPK-MNFANV 279
Query: 275 F-------KDMVASCLDQDPSKRPSAEKLMKHSFF 302
F D++ L D KR +A + + H++F
Sbjct: 280 FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 27 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 138
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 188
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 249 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 307 QALAHAYF 314
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 32 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 143
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMTGY 193
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 254 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 312 QALAHAYF 319
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 34 EIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSI------RRETKTMSLLSHPN 87
+IG G +V+K + D +VVAIK++ L S + + I +RE MS L+HPN
Sbjct: 26 QIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSL-QSIISSCFPDGLPEPCIAIVLKETLSALSYLHN 146
I+ + R+ VM F+ CG L ++ P + ++ + + Y+ N
Sbjct: 85 IVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQN 140
Query: 147 QGH--LHRDVKAGNIL---SDSDGSV--KLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
Q +HRD+++ NI D + V K+ADF +S + S H ++ + G
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHS------VSGLLGNF 190
Query: 200 YWMAPEVIRS-HTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
WMAPE I + Y+ KAD +SF + + G P K + M +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR------- 243
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
E+ L+ R ++++ C DP KRP ++K
Sbjct: 244 EEGLRPTIPEDCPPR-LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 168
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 224
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 225 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 23 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 134
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 184
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 245 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 303 QALAHAYF 310
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M L +I+ L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKX---QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 33 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 144
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 194
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 255 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 313 QALAHAYF 320
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 27 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 138
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 188
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 249 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 307 QALAHAYF 314
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 41 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 152
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 202
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 263 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 321 QALAHAYF 328
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 33 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 144
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 194
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 255 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 313 QALAHAYF 320
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 119/280 (42%), Gaps = 21/280 (7%)
Query: 25 DPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS 84
D Y+++ +IG G + + + + +VA+K I+ + + D ++++RE L
Sbjct: 17 DSDRYELVKDIGSGNFGVA-RLMRDKQSNELVAVKYIERGE-KID-ENVKREIINHRSLR 73
Query: 85 HPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
HPNI+ + L +VM + S G L I C E ++ +S +SY
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYC 131
Query: 145 HNQGHLHRDVKAGNILSDSDGS--VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWM 202
H HRD+K N L D + +K+ FG S S S H + + GTP ++
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS----SVLHSQPKSTV----GTPAYI 183
Query: 203 APEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTL 262
APEV+ AD+WS G+T + G P P E K R Y
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED-PEEPKNFRKTIHRILNVQY---- 238
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
I D S + +++ DP+KR S ++ H +F
Sbjct: 239 AIPDY-VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 32 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 143
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 193
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ + + ++ N F+ F D++ L D KR +A
Sbjct: 254 GAELLKKISSESARNYIQSLTQMPKMN--FANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 312 QALAHAYF 319
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 134/318 (42%), Gaps = 47/318 (14%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 9 DEHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 63 LDQSRTDLDSIRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
+ ++ ++ E K + + H N+L A C+ L V++ F G+L + +
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVIVEFCKFGNLSTYLR 124
Query: 119 S--------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSD 164
S + D L + + + +L ++ +HRD+ A NIL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK 184
Query: 165 GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGI 224
VK+ DFG++ IY+ G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 185 NVVKICDFGLARDIYKDPDXVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGV 238
Query: 225 TALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVAS 281
E+ + G P + ++ ++ + R R DY ++ M+
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-D 286
Query: 282 CLDQDPSKRPSAEKLMKH 299
C +PS+RP+ +L++H
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 23 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 134
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 184
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 245 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 303 QALAHAYF 310
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 44 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 155
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 205
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 266 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 324 QALAHAYF 331
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 26 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 137
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 187
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 248 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 306 QALAHAYF 313
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 20 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 131
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 181
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 242 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 300 QALAHAYF 307
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 23 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 134
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 184
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 245 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 303 QALAHAYF 310
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 47/308 (15%)
Query: 17 AQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAIDLDQSRTDLDS 72
A K ++P D K+ +G G V +A +D T VA+K + + ++ +
Sbjct: 10 ASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 73 IRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISS--------- 119
+ E K + + H N+L A C+ L V+ F G+L + + S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 120 -----CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
+ D L + + + +L ++ +HRD+ A NIL VK+ DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGR 233
+ IY+ + G A + WMAPE I Y+ ++D+WSFG+ E+ + G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGA 239
Query: 234 PPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
P + ++ ++ + R R DY ++ M+ C +PS+RP
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DCWHGEPSQRP 287
Query: 292 SAEKLMKH 299
+ +L++H
Sbjct: 288 TFSELVEH 295
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 40 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 151
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 201
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 262 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 320 QALAHAYF 327
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 28 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 139
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 189
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 250 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 308 QALAHAYF 315
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M L +I+ L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKX---QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 40 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 151
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 201
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 262 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 320 QALAHAYF 327
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 24 LDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAID---LDQSRTDLDSIRRETK 78
+D S KI IGVG + + +P + VAIK + D+ R D S E
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EAS 67
Query: 79 TMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKET 137
M HPNI++ + + ++ +M GSL + + DG + +L+
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGI 125
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
S + YL + ++HRD+ A NIL +S+ K++DFG+S + + +A T
Sbjct: 126 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-----AAYTTRGGK 180
Query: 198 TPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
P W APE I ++ ++ +D+WS+GI E +++G P
Sbjct: 181 IPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR----RETKTMSLLSHPNILN 90
IG G V++ I + ++ +A+ AI ++ T DS+R +E TM HP+I+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVK 75
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHL 150
++ +W++M + G L+S + L + + + +AL+YL ++ +
Sbjct: 76 L-IGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
HRD+ A N+L S+ VKL DFG+S + + + + WMAPE I +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK------WMAPESI-NF 186
Query: 211 TGYSFKADIWSFGITALE-LAHGRPPL 236
++ +D+W FG+ E L HG P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 33 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 144
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 194
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 255 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 313 QALAHAYF 320
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 188
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H +++ FR
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFR 244
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL P RP+ E++ H + ++
Sbjct: 245 --------------QRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 200
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 256
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 257 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 201
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 257
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 258 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 201
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 257
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 258 --------------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 41 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 152
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 202
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 263 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 321 QALAHAYF 328
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 200
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 256
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 257 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 200
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 256
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 257 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 201
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 257
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 258 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 31 PERYQNLAPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 86
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 142
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 192
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 253 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 311 QALAHAYF 318
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDST---VVAIKAI-DLDQSRTDLDSIRRETKTMS 81
P Y+I IG G Y +C D VVAIK I + + D I RE ++
Sbjct: 52 PDRYEIRHLIGTGS----YGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILN 107
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMP-----FMSCGSLQSIISSCF------PDGLPEPCI 130
L+H +++ L +V+P F + I S F P L E I
Sbjct: 108 RLNHDHVVKV---------LDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHI 158
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSH------- 183
+L L + Y+H+ G LHRD+K N L + D SVK+ DFG++ ++ P +
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
Query: 184 -------------HHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL 229
H + +T T ++ APE+I Y+ D+WS G EL
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ L A+ + HN G LHRD+K NIL D + G +KL DFG A + + + TD
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------TVYTD 201
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE IR H + A +WS GI ++ G P H ++ FR
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIGGQVFFR 257
Query: 255 FSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
++ S + ++ CL PS RP+ E++ H + ++
Sbjct: 258 --------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGX 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 42/274 (15%)
Query: 28 SYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPN 87
S K+ ++G G V+ A T VA+K + +++ E M L H
Sbjct: 183 SLKLEKKLGAGQFGEVWMATY--NKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDK 238
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
++ H + + ++++ FM+ GSL + S P P + + ++++ +
Sbjct: 239 LVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 148 GHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY---WMAP 204
++HRD++A NIL + K+ADFG++ G + W AP
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLAR-------------------VGAKFPIKWTAP 338
Query: 205 EVIRSHTGYSFKADIWSFGITALELA-HGRPPLSHLP-PEKSLLMKMTQRFRFSDYEKTL 262
E I + ++ K+D+WSFGI +E+ +GR P + PE ++ + + +R E
Sbjct: 339 EAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRPENC- 394
Query: 263 KIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
+++ C P +RP+ E +
Sbjct: 395 ---------PEELYNIMMRCWKNRPEERPTFEYI 419
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 26 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 137
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 187
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 248 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 306 QALAHAYF 313
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 17 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 128
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 178
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 239 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 297 QALAHAYF 304
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 24 LDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAID---LDQSRTDLDSIRRETK 78
+D S KI IGVG + + +P + VAIK + D+ R D S E
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EAS 61
Query: 79 TMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKET 137
M HPNI++ + + ++ +M GSL + + DG + +L+
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGI 119
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
S + YL + ++HRD+ A NIL +S+ K++DFG+S + + +A T
Sbjct: 120 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-----AAYTTRGGK 174
Query: 198 TPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
P W APE I ++ ++ +D+WS+GI E +++G P
Sbjct: 175 IPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 17 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M L +I+ L + + ++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCA---KLTDDHVQFLIY 128
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 178
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 239 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 297 QALAHAYF 304
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 18 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 129
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 179
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 240 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 298 QALAHAYF 305
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 24 LDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAIDLDQSRTDLDSIRRETKTMS 81
+D S KI IG G + + +P + VAIK + + E M
Sbjct: 30 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMG 89
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSA 140
HPN+++ + + + ++ FM GSL S + DG + +L+ +
Sbjct: 90 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAG 147
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
+ YL + ++HRD+ A NIL +S+ K++DFG+S + + + + SA+ +
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-- 205
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
W APE I+ + ++ +D+WS+GI E +++G P
Sbjct: 206 WTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 18 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 129
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 179
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 240 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 298 QALAHAYF 305
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 17 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 128
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 178
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 239 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 297 QALAHAYF 304
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 19 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 130
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 180
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 241 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 299 QALAHAYF 306
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 96 SVDSRLWVVMPFMSCGSLQSIISSCFPDG--LPEPCIAIVLKETLSALSYLHNQGHLHRD 153
S + L V+M ++ +L ++ S G +P I+I + + A+ ++H+ G HRD
Sbjct: 108 SQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRD 166
Query: 154 VKAGNILSDS-DGSVKLADFGVSASIY--EPSHHHHHGSAMITDMAGTPYWMAPEVIRSH 210
+K N+L +S D ++KL DFG + + EPS A I ++ APE++
Sbjct: 167 IKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS------VAXICSR----FYRAPELMLGA 216
Query: 211 TGYSFKADIWSFGITALELAHGRPPLS--------------HLPPEKSLLMKMTQRF--- 253
T Y+ D+WS G EL G+P S P K +++M +
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQ----DPSKRPSAEKLMKHSFFKNCNKGV 309
RF TLK KD K + L+Q +P R + + M H FF +
Sbjct: 277 RFP----TLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSY 332
Query: 310 EFFVKN 315
E VKN
Sbjct: 333 ESEVKN 338
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 23 PLDPS--SYKILDEI------------GVGVSAIVYKAICIPMDSTV---VAIKAIDLDQ 65
PLDPS + K+L I G GV V+K + IP ++ V IK I+
Sbjct: 13 PLDPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS 72
Query: 66 SRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSII----SSCF 121
R ++ + L H +I+ S L +V ++ GSL + +
Sbjct: 73 GRQSFQAVTDHMLAIGSLDHAHIVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALG 131
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
P L + I + YL G +HR++ A N+L S V++ADFGV A + P
Sbjct: 132 PQLLLNWGVQIA-----KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV-ADLLPP 185
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTG-YSFKADIWSFGITALEL 229
++ A TP WMA E I H G Y+ ++D+WS+G+T EL
Sbjct: 186 DDKQ-----LLYSEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWEL 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + D + + RE + M L +P I+ ++ L +VM G L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHK 98
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + +P +A +L + + YL + +HRD+ A N+L + K++DFG+S
Sbjct: 99 FLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRP 234
++ ++ SA + W APE I + +S ++D+WS+G+T E L++G+
Sbjct: 158 KALGADDSYYTARSAGKWPLK----WYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQK 212
Query: 235 PLSHLP-PEKSLLMKMTQRF 253
P + PE ++ +R
Sbjct: 213 PYKKMKGPEVMAFIEQGKRM 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH 92
D +G G +A V++ + AIK + +D RE + + L+H NI+
Sbjct: 15 DILGQGATANVFRGRH-KKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 93 CSFSVDSRLW-----VVMPFMSCGSLQSII---SSCFPDGLPEPCIAIVLKETLSALSYL 144
F+++ ++M F CGSL +++ S+ + GLPE IVL++ + +++L
Sbjct: 73 --FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNHL 128
Query: 145 HNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
G +HR++K GNI+ D KL DFG + + + + GT
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--------FVSLYGTEE 180
Query: 201 WMAPE-----VIRS--HTGYSFKADIWSFGITALELAHGRPPL 236
++ P+ V+R Y D+WS G+T A G P
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 26/298 (8%)
Query: 4 HEQEDQCSSTGTIAQKIQYPLDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAI 61
H ED + A++ LD ++ I +G G + + +P + VAIK +
Sbjct: 26 HTYEDPTQTVHEFAKE----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 62 DLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF 121
+ + E M HPNI+ + + +V +M GSL S +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
+ + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S + +
Sbjct: 142 AQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPPLSHL 239
+A T P W +PE I ++ ++ +D+WS+GI E +++G P +
Sbjct: 201 PE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 240 PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ ++ + + +R A ++ C +D + RP E+++
Sbjct: 255 -SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 16 IAQKIQYP-LDPSSYKI-LDE-IGVGVSAIVYKAICIPMDSTVV--AIKAIDLDQSRTDL 70
+ Q +Q+ + PSS + +E IG G VY + D + A+K+++ ++
Sbjct: 17 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 76
Query: 71 DSIRRETKTMSLLSHPNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
E M SHPN+L+ C S S L VV+P+M G L++ I + + +
Sbjct: 77 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP---SHHH 185
I L + + +L ++ +HRD+ A N + D +VK+ADFG++ + + S H+
Sbjct: 136 LIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHN 194
Query: 186 HHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
G+ + WMA E +++ ++ K+D+WSFG+ EL G PP
Sbjct: 195 KTGAKLPVK------WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPP 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMD---STVVAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D +A+K + QS RE + +
Sbjct: 50 PERYQTLSPVGSGA----YGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ + L ++V M G+ + I C L + + ++
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 161
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +T
Sbjct: 162 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMTGY 211
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
S++ +M +Y +L K + F+ F D++ L D KR +A
Sbjct: 272 PASVISRMPSH-EARNYINSLPQMPK-RNFADVFIGANPLAVDLLEKMLVLDTDKRITAS 329
Query: 295 KLMKHSFF 302
+ + H +F
Sbjct: 330 EALAHPYF 337
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 34/255 (13%)
Query: 14 GTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSI 73
G I + ++ P +Y+I IG G VY A + V K + + D I
Sbjct: 18 GAIIKNVKVP---DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRI 74
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDS-----RLWVVMPFMSCGSLQSIISSCFPDGLPEP 128
RE ++ L I+ H + L++V+ ++ L+ + + P L E
Sbjct: 75 LREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKT--PIFLTEQ 131
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI---------- 178
+ +L L ++H G +HRD+K N L + D SVK+ DFG++ +I
Sbjct: 132 HVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN 191
Query: 179 --------YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL- 229
EP H+ + +T T ++ APE+I Y+ DIWS G EL
Sbjct: 192 DLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
Query: 230 ----AHGRPPLSHLP 240
+H P + P
Sbjct: 252 NMMKSHINNPTNRFP 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 26/298 (8%)
Query: 4 HEQEDQCSSTGTIAQKIQYPLDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAI 61
H ED + A++ LD ++ I +G G + + +P + VAIK +
Sbjct: 26 HTYEDPTQTVHEFAKE----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 62 DLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF 121
+ + E M HPNI+ + + +V +M GSL S +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
+ + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S + +
Sbjct: 142 AQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPPLSHL 239
+A T P W +PE I ++ ++ +D+WS+GI E +++G P +
Sbjct: 201 PE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 240 PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ ++ + + +R A ++ C +D + RP E+++
Sbjct: 255 -SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 26/298 (8%)
Query: 4 HEQEDQCSSTGTIAQKIQYPLDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAI 61
H ED + A++ LD ++ I +G G + + +P + VAIK +
Sbjct: 24 HTYEDPTQTVHEFAKE----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 79
Query: 62 DLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF 121
+ + E M HPNI+ + + +V +M GSL S +
Sbjct: 80 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 139
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
+ + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S + +
Sbjct: 140 AQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPPLSHL 239
+A T P W +PE I ++ ++ +D+WS+GI E +++G P +
Sbjct: 199 PE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 252
Query: 240 PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ ++ + + +R A ++ C +D + RP E+++
Sbjct: 253 -SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ D+G++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S
Sbjct: 136 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 249 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 294 EKLM 297
E+++
Sbjct: 298 EQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S
Sbjct: 136 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 249 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 294 EKLM 297
E+++
Sbjct: 298 EQIV 301
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 11 DEHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 68
Query: 63 LDQSRTDLDSIRRETKTMSLLSH-PNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISS 119
+ ++ ++ E K + + H N++N C+ L V++ F G+L + + S
Sbjct: 69 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-KPGGPLMVIVEFCKFGNLSTYLRS 127
Query: 120 ------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV 167
+ D L + + + +L ++ +HRD+ A NIL V
Sbjct: 128 KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVV 187
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ I + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVLLW 241
Query: 228 EL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLD 284
E+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 242 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DCWH 289
Query: 285 QDPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 290 GEPSQRPTFSELVEH 304
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMAGF 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMAGF 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 24 LDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAID---LDQSRTDLDSIRRETK 78
+D S KI IGVG + + +P + VAIK + D+ R D S E
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EAS 82
Query: 79 TMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKET 137
M HPNI++ + + ++ +M GSL + + DG + +L+
Sbjct: 83 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGI 140
Query: 138 LSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAG 197
S + YL + +HRD+ A NIL +S+ K++DFG+S + + +A T
Sbjct: 141 GSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-----AAYTTRGGK 195
Query: 198 TPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
P W APE I ++ ++ +D+WS+GI E +++G P
Sbjct: 196 IPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P + L +G G Y ++C D+ + VA+K + QS RE + +
Sbjct: 27 PQRLQGLRPVGSGA----YGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 82 LLSHPNILNAHCSF----SVD--SRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
L H N++ F S++ S +++V M L +I+ S L + + ++
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA-DLNNIVKS---QALSDEHVQFLVY 138
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ G +HRD+K N+ + D +++ DFG++ +T
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA----------RQADEEMTGY 188
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
T ++ APE++ + Y+ DIWS G EL G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQS-RTDLDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 11 YSILKQIGSGGSSKVFQVL--NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 69 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 124
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D GT +M
Sbjct: 125 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGTVNYMP 177
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 237
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 238 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 74 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 186
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 187 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 75 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 132
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 187
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 188 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 73 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 130
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 131 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 185
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 186 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 72 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 129
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 184
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 185 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 73 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKG 130
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 131 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 185
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 186 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 65
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M F+ GSL+ + + + +
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK-HKERIDHIKLLQYTS 124
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 179
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 180 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI-DLDQSRTDLDSIRRETKTMSLLSHPN 87
Y+I++ IG G +V A + VAIK I + T+ RE K + H N
Sbjct: 56 YEIIETIGNGAYGVVSSARR-RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 88 I------LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
I L + ++VV+ M L II S P L + L + L L
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEH--VRYFLYQLLRGL 171
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI-YEPSHHHHHGSAMITDMAGTPY 200
Y+H+ +HRD+K N+L + + +K+ DFG++ + P+ H + +T+ T +
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY----FMTEYVATRW 227
Query: 201 WMAPEVIRSHTGYSFKADIWSFG 223
+ APE++ S Y+ D+WS G
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVG 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 76 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 133
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 134 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 189 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 33 DEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH 92
D +G G +A V++ + AIK + +D RE + + L+H NI+
Sbjct: 15 DILGQGATANVFRGRH-KKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 93 CSFSVDSRLW-----VVMPFMSCGSLQSII---SSCFPDGLPEPCIAIVLKETLSALSYL 144
F+++ ++M F CGSL +++ S+ + GLPE IVL++ + +++L
Sbjct: 73 --FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNHL 128
Query: 145 HNQGHLHRDVKAGNIL----SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
G +HR++K GNI+ D KL DFG + + + + GT
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--------FVXLYGTEE 180
Query: 201 WMAPE-----VIRS--HTGYSFKADIWSFGITALELAHGRPPL 236
++ P+ V+R Y D+WS G+T A G P
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI++ + + +V +M GSL +
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 116 IISSCFPDGLPEPCIAIVLKETLSA-LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
+ DG + + +SA + YL + G++HRD+ A NIL +S+ K++DFG+
Sbjct: 113 FLKK--NDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 170
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHG 232
S + + +A T P W APE I + ++ +D+WS+GI E +++G
Sbjct: 171 SRVLEDDPE-----AAYTTRGGKIPIRWTAPEAI-AFRKFTSASDVWSYGIVMWEVVSYG 224
Query: 233 RPP 235
P
Sbjct: 225 ERP 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 44 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 155
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMXGY 205
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 266 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 324 QALAHAYF 331
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 41 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 152
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMXGX 202
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 263 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 321 QALAHAYF 328
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S
Sbjct: 124 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 183 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 236
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 237 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 285
Query: 294 EKLM 297
E+++
Sbjct: 286 EQIV 289
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD-LDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 30 YSILKQIGSGGSSKVFQVL--NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 88 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D GT +M
Sbjct: 144 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGTVNYMP 196
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 257 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S
Sbjct: 107 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 166 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 220 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 268
Query: 294 EKLM 297
E+++
Sbjct: 269 EQIV 272
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 17 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 128
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DFG++ H +
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMAGF 178
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 239 GAELLKKISSE-SARNYIQSLAQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 297 QALAHAYF 304
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD-LDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 58 YSILKQIGSGGSSKVFQVLN--EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 116 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D GT +M
Sbjct: 172 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGTVNYMP 224
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 284
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 285 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 63
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 64 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 122
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HR++ NIL +++ VK+ DFG++ + + ++ + +
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK-----VKEP 177
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 178 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 211
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAI-DLDQSRTDLDSIRRETKTMSLLSHPN 87
Y+I++ IG G +V A + VAIK I + T+ RE K + H N
Sbjct: 57 YEIIETIGNGAYGVVSSARRR-LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 88 I------LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSAL 141
I L + ++VV+ M L II S P L + L + L L
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEH--VRYFLYQLLRGL 172
Query: 142 SYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI-YEPSHHHHHGSAMITDMAGTPY 200
Y+H+ +HRD+K N+L + + +K+ DFG++ + P+ H + +T+ T +
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY----FMTEYVATRW 228
Query: 201 WMAPEVIRSHTGYSFKADIWSFG 223
+ APE++ S Y+ D+WS G
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVG 251
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD-LDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 58 YSILKQIGSGGSSKVFQVL--NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 116 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D GT +M
Sbjct: 172 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGTVNYMP 224
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 284
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 285 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG++
Sbjct: 136 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 249 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 294 EKLM 297
E+++
Sbjct: 298 EQIV 301
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 32 LDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
L +G GV V+K + IP ++ V IK I+ R ++ + L H +I
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSII----SSCFPDGLPEPCIAIVLKETLSALSYL 144
+ S L +V ++ GSL + + P L + I + YL
Sbjct: 78 VRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA-----KGMYYL 131
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY-WMA 203
G +HR++ A N+L S V++ADFGV A + P ++ A TP WMA
Sbjct: 132 EEHGMVHRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQ-----LLYSEAKTPIKWMA 185
Query: 204 PEVIRSHTG-YSFKADIWSFGITALEL 229
E I H G Y+ ++D+WS+G+T EL
Sbjct: 186 LESI--HFGKYTHQSDVWSYGVTVWEL 210
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 137
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 194
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 195 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQS-RTDLDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 10 YSILKQIGSGGSSKVFQVL--NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 68 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 123
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D GT +M
Sbjct: 124 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGTVNYMP 176
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 236
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 237 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 152
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 209
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 210 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 249
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 37/290 (12%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD-LDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 14 YSILKQIGSGGSSKVFQVL--NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 72 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 127
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D GT +M
Sbjct: 128 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGTVNYMP 180
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRF 253
PE I+ + S K+D+WS G + +G+ P + ++ ++++
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------QQIINQISKLH 234
Query: 254 RFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
D ++ D +K +D++ CL +DP +R S +L+ H + +
Sbjct: 235 AIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
+ RE + LL HP+I+ + + + + +V+ + I+ + E
Sbjct: 56 VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRR 112
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
++ + A+ Y H +HRD+K N+L D + +VK+ADFG+S + + G+ +
Sbjct: 113 FFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-------GNFLK 165
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
T G+P + APEVI + D+WS GI + GR P
Sbjct: 166 TS-CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 74 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG + + E +H G I
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----- 186
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 187 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 65
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + + +
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA-HAERIDHIKLLQYTS 124
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 179
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 180 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 130
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 188 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+
Sbjct: 136 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 249 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 294 EKLM 297
E+++
Sbjct: 298 EQIV 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V +M GSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G +HRD+ A NIL +S+ K++DFG+S
Sbjct: 136 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 249 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 294 EKLM 297
E+++
Sbjct: 298 EQIV 301
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ FG++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 74 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG + + E +H G I
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----- 186
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 187 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 65
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 124
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 179
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 180 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 213
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 127
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 185 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T+ TPY++APEV+ Y
Sbjct: 148 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTEPCYTPYYVAPEVLGPEK-YDKSC 198
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 199 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 254
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 255 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 61
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 62 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 120
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 175
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 176 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 209
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 130
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 188 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GXLLDYVRE-HKDNIGSQYLLNWCVQIA 127
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 185 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 67
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 68 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 126
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 181
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 182 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 69
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 70 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 128
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 183
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 184 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 129
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 187 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 135/317 (42%), Gaps = 46/317 (14%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D + +G G V +A +D T VA+K +
Sbjct: 10 DEHCERLPYDASKWEFPRD--RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 67
Query: 63 LDQSRTDLDSIRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
+ ++ ++ E K + + H N+L A C+ L V++ F G+L + +
Sbjct: 68 EGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVIVEFCKFGNLSTYLR 125
Query: 119 SCFPDGLPEPCIAIVLKETLS-------------ALSYLHNQGHLHRDVKAGNILSDSDG 165
S + +P + K+ L+ + +L ++ +HRD+ A NIL
Sbjct: 126 SKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ I + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVL 239
Query: 226 ALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASC 282
E+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DC 287
Query: 283 LDQDPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 288 WHGEPSQRPTFSELVEH 304
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 127
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 185 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 68
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 69 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 127
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 182
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 183 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 130
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 188 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 76 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 133
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG + + E +H G I
Sbjct: 134 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----- 188
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 189 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 60
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 61 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 119
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 174
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 175 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 66
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 67 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 125
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 180
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 181 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L ++M M G L S I E A ++++ +A+ +LH+ HRDVK N+L
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S D +KL DFG + + +A+ T TPY++APEV+ Y
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQ--------NALQTP-CYTPYYVAPEVLGPEK-YDKSC 191
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + +++ M +R R Y + + S K
Sbjct: 192 DMWSLGVIMYILLCGFPPF-YSNTGQAISPGMKRRIRLGQYGFP---NPEWSEVSEDAKQ 247
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFF 302
++ L DP++R + + M H +
Sbjct: 248 LIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L ++M M G L S I E A ++++ +A+ +LH+ HRDVK N+L
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S D +KL DFG + + +A+ T TPY++APEV+ Y
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQ--------NALQTP-CYTPYYVAPEVLGPEK-YDKSC 210
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + +++ M +R R Y + + S K
Sbjct: 211 DMWSLGVIMYILLCGFPPF-YSNTGQAISPGMKRRIRLGQYGFP---NPEWSEVSEDAKQ 266
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFF 302
++ L DP++R + + M H +
Sbjct: 267 LIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 121
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 176
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 177 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 26/298 (8%)
Query: 4 HEQEDQCSSTGTIAQKIQYPLDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAI 61
H ED + A++ LD ++ I +G G + + +P + VAIK +
Sbjct: 26 HTYEDPTQTVHEFAKE----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 62 DLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCF 121
+ + E M HPNI+ + + +V M GSL S +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD 141
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
+ + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S + +
Sbjct: 142 AQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPPLSHL 239
+A T P W +PE I ++ ++ +D+WS+GI E +++G P +
Sbjct: 201 PE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 240 PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
+ ++ + + +R A ++ C +D + RP E+++
Sbjct: 255 -SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P + L +G G Y ++C D+ + VA+K + QS RE + +
Sbjct: 27 PQRLQGLRPVGSGA----YGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 82 LLSHPNILNAHCSF----SVD--SRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
L H N++ F S++ S +++V M G+ + I C L + + ++
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKC--QALSDEHVQFLVY 138
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ G +HRD+K N+ + D +++ DFG++ +T
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA----------RQADEEMTGY 188
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
T ++ APE++ + Y+ DIWS G EL G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 133
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 190
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 191 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 230
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 33 DEIGVGV-SAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILN 90
D +G G IVY+ + D+ VA+K I L + + D RE + + HPN++
Sbjct: 30 DVLGHGAEGTIVYRGM---FDNRDVAVKRI-LPECFSFAD---REVQLLRESDEHPNVIR 82
Query: 91 AHCSFSVDSRLWVVMPFMSCGSLQSIISSC-FPDGLPEPCIAIVLKETLSALSYLHNQGH 149
C+ D + + + +LQ + F EP +L++T S L++LH+
Sbjct: 83 YFCT-EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP--ITLLQQTTSGLAHLHSLNI 139
Query: 150 LHRDVKAGNIL---SDSDGSVK--LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
+HRD+K NIL ++ G +K ++DFG+ + H S + GT W+AP
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV----PGTEGWIAP 195
Query: 205 EVIRSHT--GYSFKADIWSFG-ITALELAHGRPPLSH-LPPEKSLLMKMTQRFRFSDYEK 260
E++ ++ DI+S G + ++ G P L + ++L+
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGAC---------- 245
Query: 261 TLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFF 312
+L K ++++ + DP KRPSA+ ++KH FF + K ++FF
Sbjct: 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFF 297
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 134
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 192 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 129/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQS-RTDLDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 30 YSILKQIGSGGSSKVFQVL--NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 88 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++ D GT +M
Sbjct: 144 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDX-----XXVVKDSQVGTVNYMP 196
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 257 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 121
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 176
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 177 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 93
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 94 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 152
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEP 207
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 208 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 241
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 121
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 178
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 179 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 124
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 181
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 182 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 45/317 (14%)
Query: 7 EDQCSSTGTIAQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAID 62
++ C A K ++P D K+ +G G V +A +D T VA+K +
Sbjct: 9 DEHCERLPYDASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 63 LDQSRTDLDSIRRETKTMSLLSH-PNILN--AHCSFSVDSRLWVVMPFMSCGSLQSIISS 119
+ ++ ++ E K + + H N++N C+ L V++ F G+L + + S
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-KPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 120 --------------CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDG 165
+ D L + + + +L ++ +HRD+ A NIL
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGIT 225
VK+ DFG++ I + G A + WMAPE I Y+ ++D+WSFG+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVL 239
Query: 226 ALEL-AHGRPPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASC 282
E+ + G P + ++ ++ + R R DY ++ M+ C
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DC 287
Query: 283 LDQDPSKRPSAEKLMKH 299
+PS+RP+ +L++H
Sbjct: 288 WHGEPSQRPTFSELVEH 304
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 25 DPSSY-----KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRET 77
DP+ + K L ++G G V P+ + A+ Q T+ L RE
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 78 KTMSLLSHPNILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ + L H NI+ C + L ++M ++ GSL+ + + + +
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTS 121
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + YL + ++HRD+ NIL +++ VK+ DFG++ + + + +
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK-----VKEP 176
Query: 196 AGTP-YWMAPEVIRSHTGYSFKADIWSFGITALEL 229
+P +W APE + + + +S +D+WSFG+ EL
Sbjct: 177 GESPIFWYAPESL-TESKFSVASDVWSFGVVLYEL 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ DF ++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 48/195 (24%)
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYE-------- 180
C+ I + + A+ +LH++G +HRD+K NI D VK+ DFG+ ++ +
Sbjct: 166 CLHIFI-QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 181 ---PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLS 237
P++ H G GT +M+PE I + YS K DI+S G+ EL +
Sbjct: 225 TPMPAYATHXGQ------VGTKLYMSPEQIHGN-NYSHKVDIFSLGLILFELLY------ 271
Query: 238 HLPPEKSLLMKMTQRFRFSDYEKTLKIKD-KNKKFSRAFKD-------MVASCLDQDPSK 289
S +M E+ I D +N KF F MV L P++
Sbjct: 272 ------SFSTQM---------ERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTE 316
Query: 290 RPSAEKLMKHSFFKN 304
RP A +++++ F+N
Sbjct: 317 RPEATDIIENAIFEN 331
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 4 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 60
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 61 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 116 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 175
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 176 LCDFGSAKQLV-------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 227
Query: 229 LAHGRP 234
L G+P
Sbjct: 228 LLLGQP 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 82
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 83 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 197
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 198 LCDFGSAKQLV-------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 229 LAHGRP 234
L G+P
Sbjct: 250 LLLGQP 255
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 200 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 250
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 251 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 306
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 307 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 336
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 112/281 (39%), Gaps = 63/281 (22%)
Query: 75 RETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSII-------SSCFPDGL 125
RE + L HPN+++ F D ++W++ + L II ++ P L
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQL 125
Query: 126 PEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS----VKLADFGVSASIYEP 181
P + +L + L + YLH LHRD+K NIL +G VK+AD G + P
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 182 SHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP------- 234
A + + T ++ APE++ Y+ DIW+ G EL P
Sbjct: 186 L----KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 235 ------PLSH-----------LP-----------PEKSLLMKMTQRFRFSD-----YEKT 261
P H P PE S LMK +R +++ Y +
Sbjct: 242 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 301
Query: 262 LKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFF 302
K+K +K F ++ L DP KR ++E+ M+ +F
Sbjct: 302 HKVKPDSKAFH-----LLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 150 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 200
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 201 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 256
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 257 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 194 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 244
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 245 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 300
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 301 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 330
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + +L ++ +HRD+ A NIL VK+ DFG++ IY+ + G A +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQ--R 252
WMAPE I Y+ ++D+WSFG+ E+ + G P + ++ ++ + R
Sbjct: 268 -----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 321
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
R DY ++ M+ C +PS+RP+ +L++H
Sbjct: 322 MRAPDYTT-----------PEMYQTML-DCWHGEPSQRPTFSELVEH 356
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ D G++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + +L ++ +HRD+ A NIL VK+ DFG++ IY+ + G A +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQ--R 252
WMAPE I Y+ ++D+WSFG+ E+ + G P + ++ ++ + R
Sbjct: 266 -----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 319
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
R DY ++ M+ C +PS+RP+ +L++H
Sbjct: 320 MRAPDYTT-----------PEMYQTML-DCWHGEPSQRPTFSELVEH 354
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 7 EDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAID 62
+D T +A Q P P SY IG G +VY+A +C DS +VAIK +
Sbjct: 6 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVL 62
Query: 63 LDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-- 118
D+ + RE + M L H NI+ F S + + V + + +++
Sbjct: 63 QDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 117
Query: 119 ---SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGV 174
S LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG
Sbjct: 118 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 177
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
+ + G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 178 AKQLV-------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + +L ++ +HRD+ A NIL VK+ DFG++ IY+ + G A +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQ--R 252
WMAPE I Y+ ++D+WSFG+ E+ + G P + ++ ++ + R
Sbjct: 261 -----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 314
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
R DY ++ M+ C +PS+RP+ +L++H
Sbjct: 315 MRAPDYTT-----------PEMYQTML-DCWHGEPSQRPTFSELVEH 349
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ + +L ++ +HRD+ A NIL VK+ DFG++ IY+ + G A +
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQ--R 252
WMAPE I Y+ ++D+WSFG+ E+ + G P + ++ ++ + R
Sbjct: 259 -----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 312
Query: 253 FRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKH 299
R DY ++ M+ C +PS+RP+ +L++H
Sbjct: 313 MRAPDYTT-----------PEMYQTML-DCWHGEPSQRPTFSELVEH 347
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 7 EDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAID 62
+D T +A Q P P SY IG G +VY+A +C DS +VAIK +
Sbjct: 17 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVL 73
Query: 63 LDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-- 118
D+ + RE + M L H NI+ F S + + V + + +++
Sbjct: 74 QDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 128
Query: 119 ---SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGV 174
S LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG
Sbjct: 129 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 188
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
+ + G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 189 AKQLV-------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 155 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 205
Query: 218 DIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF 275
D+WS G+ L G PP +H ++ M R R YE + + S
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNH---GLAISPGMKTRIRMGQYEFP---NPEWSEVSEEV 259
Query: 276 KDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
K ++ + L +P++R + + M H + K
Sbjct: 260 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 291
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ D G++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 150 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 200
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 201 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 256
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 257 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 7 EDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAID 62
+D T +A Q P P SY IG G +VY+A +C DS +VAIK +
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVL 66
Query: 63 LDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-- 118
D+ + RE + M L H NI+ F S + + V + + +++
Sbjct: 67 QDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 119 ---SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGV 174
S LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG
Sbjct: 122 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
+ + G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 182 AKQLV-------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 164 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 214
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 215 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 270
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 271 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 300
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 156 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 206
Query: 218 DIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF 275
D+WS G+ L G PP +H ++ M R R YE + + S
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNH---GLAISPGMKTRIRMGQYEFP---NPEWSEVSEEV 260
Query: 276 KDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
K ++ + L +P++R + + M H + K
Sbjct: 261 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 292
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P + L +G G Y ++C D+ + VA+K + QS RE + +
Sbjct: 19 PQRLQGLRPVGSGA----YGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 74
Query: 82 LLSHPNILNAHCSF----SVD--SRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
L H N++ F S++ S +++V M G+ + I C L + + ++
Sbjct: 75 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKC--QALSDEHVQFLVY 130
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ G +HRD+K N+ + D +++ DFG++ +T
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA----------RQADEEMTGY 180
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
T ++ APE++ + Y+ DIWS G EL G+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 154 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 204
Query: 218 DIWSFGITALELAHGRPPL--SHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF 275
D+WS G+ L G PP +H ++ M R R YE + + S
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNH---GLAISPGMKTRIRMGQYEFP---NPEWSEVSEEV 258
Query: 276 KDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
K ++ + L +P++R + + M H + K
Sbjct: 259 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 290
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF-SVDSRLWVVMPFMSCGSLQSIIS------SCF 121
+ RE + M L H NI+ F S + VV + + + S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRA 115
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 174
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 175 ------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 47/308 (15%)
Query: 17 AQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAIDLDQSRTDLDS 72
A K ++P D K+ +G G V +A +D T VA+K + + ++ +
Sbjct: 10 ASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 73 IRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISS--------- 119
+ E K + + H N+L A C+ L V++ F G+L + + S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 120 -----CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
+ D L + + + +L ++ +HRD+ A NIL VK+ DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGR 233
+ I + G A + WMAPE I Y+ ++D+WSFG+ E+ + G
Sbjct: 186 ARDIXKDPDXVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGA 239
Query: 234 PPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
P + ++ ++ + R R DY ++ M+ C +PS+RP
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DCWHGEPSQRP 287
Query: 292 SAEKLMKH 299
+ +L++H
Sbjct: 288 TFSELVEH 295
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 129
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG + + E +H G I
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 187 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 149 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 199
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 200 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 255
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 256 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 285
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +VM + G L S I E + ++K A+ YLH+ HRDVK N+L
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 148 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 198
Query: 218 DIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKD 277
D+WS G+ L G PP + ++ M R R YE + + S K
Sbjct: 199 DMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMGQYEFP---NPEWSEVSEEVKM 254
Query: 278 MVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
++ + L +P++R + + M H + K
Sbjct: 255 LIRNLLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 26 PSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLD-QSRTDLDSIRRETKTMS 81
P Y+ L +G G Y ++C D+ VA+K + QS RE + +
Sbjct: 21 PERYQNLSPVGSGA----YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 82 LLSHPNILNAHCSFSVDSRL------WVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLK 135
+ H N++ F+ L ++V M G+ + I C L + + ++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKC--QKLTDDHVQFLIY 132
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDM 195
+ L L Y+H+ +HRD+K N+ + D +K+ D G++ H +T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA----------RHTDDEMTGY 182
Query: 196 AGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR---PPLSHL-----------PP 241
T ++ APE++ + Y+ DIWS G EL GR P H+ P
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 242 EKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAF-------KDMVASCLDQDPSKRPSAE 294
LL K++ +Y ++L K F+ F D++ L D KR +A
Sbjct: 243 GAELLKKISSE-SARNYIQSLTQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 295 KLMKHSFF 302
+ + H++F
Sbjct: 301 QALAHAYF 308
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 24 LDPSSYKILDEIGVG-VSAIVYKAICIPMDSTV-VAIKAIDLDQSRTDLDSIRRETKTMS 81
+D S KI IG G + + +P + VAIK + + E M
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMG 63
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSA 140
HPN+++ + + + ++ FM GSL S + DG + +L+ +
Sbjct: 64 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAG 121
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
+ YL + ++HR + A NIL +S+ K++DFG+S + + + + SA+ +
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP--IR 179
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
W APE I+ + ++ +D+WS+GI E +++G P
Sbjct: 180 WTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 30 KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPN 87
K L ++G G V P+ + A+ Q T+ L RE + + L H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 88 ILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
I+ C + L ++M ++ GSL+ + + + + + + YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLG 149
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP-YWMAP 204
+ ++HRD+ NIL +++ VK+ DFG++ + + + + +P +W AP
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEPGESPIFWYAP 204
Query: 205 EVIRSHTGYSFKADIWSFGITALEL 229
E + + + +S +D+WSFG+ EL
Sbjct: 205 ESL-TESKFSVASDVWSFGVVLYEL 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V M GSL S
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G++HRD+ A NIL +S+ K++DFG+S
Sbjct: 107 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 166 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 220 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 268
Query: 294 EKLM 297
E+++
Sbjct: 269 EQIV 272
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 30 KILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD--LDSIRRETKTMSLLSHPN 87
K L ++G G V P+ + A+ Q T+ L RE + + L H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 88 ILNAH--CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLH 145
I+ C + L ++M ++ GSL+ + + + + + + YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLG 149
Query: 146 NQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP-YWMAP 204
+ ++HRD+ NIL +++ VK+ DFG++ + + + + +P +W AP
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-----XXKVKEPGESPIFWYAP 204
Query: 205 EVIRSHTGYSFKADIWSFGITALEL 229
E + + + +S +D+WSFG+ EL
Sbjct: 205 ESL-TESKFSVASDVWSFGVVLYEL 228
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 82
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 83 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 197
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 198 LCDFGSAKQLV-------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 229 LAHGRP 234
L G+P
Sbjct: 250 LLLGQP 255
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 30/242 (12%)
Query: 60 AIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISS 119
A+ + R + ++ + T HPNI+ H F ++VM ++ G L I
Sbjct: 40 AVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK 99
Query: 120 CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL---SDSDGSVKLADFGVSA 176
E + ++++ +SA+S++H+ G +HRD+K N+L + + +K+ DFG A
Sbjct: 100 --KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGF-A 156
Query: 177 SIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL 236
+ P + + T ++ APE++ + GY D+WS G+ + G+ P
Sbjct: 157 RLKPPDNQP------LKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPF 209
Query: 237 -SHLPPEKSL-------LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPS 288
SH ++SL +MK ++ FS +E + K S+ KD++ L DP+
Sbjct: 210 QSH---DRSLTCTSAVEIMKKIKKGDFS-FE-----GEAWKNVSQEAKDLIQGLLTVDPN 260
Query: 289 KR 290
KR
Sbjct: 261 KR 262
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 18/213 (8%)
Query: 35 IGVGVSAIVYKAICIPMDS---TVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNA 91
IG G VYK + VAIK + + E M SH NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 92 HCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSALSYLHNQGHL 150
S + ++ +M G+L + DG + +L+ + + YL N ++
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 151 HRDVKAGNILSDSDGSVKLADFGVSASIY---EPSHHHHHGSAMITDMAGTPYWMAPEVI 207
HRD+ A NIL +S+ K++DFG+S + E ++ G I W APE I
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-------WTAPEAI 222
Query: 208 RSHTGYSFKADIWSFGITALE-LAHGRPPLSHL 239
S+ ++ +D+WSFGI E + +G P L
Sbjct: 223 -SYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 43/293 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD-LDSIRRETKTMSLLSH-- 85
Y IL +IG G S+ V++ + + AIK ++L+++ LDS R E ++ L
Sbjct: 58 YSILKQIGSGGSSKVFQVLN--EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPC-IAIVLKETLSALSYL 144
I+ + D +++VM CG++ + S +P K L A+ +
Sbjct: 116 DKIIRLYDYEITDQYIYMVM---ECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITD-MAGTPYWMA 203
H G +H D+K N L DG +KL DFG++ + +P ++++ D G +M
Sbjct: 172 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPD-----TTSVVKDSQVGAVNYMP 224
Query: 204 PEVIRSHTG----------YSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKM---T 250
PE I+ + S K+D+WS G + +G+ P + + S L +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 284
Query: 251 QRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
F D I +K+ +D++ CL +DP +R S +L+ H + +
Sbjct: 285 HEIEFPD------IPEKD------LQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 134
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG + + E +H G I
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 192 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAIK + S I E M
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 127
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG + + E +H G I
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 185 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 5 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 61
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-----SCF 121
+ RE + M L H NI+ F S + + V + + +++ S
Sbjct: 62 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 116
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 117 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 175
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 176 ------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-----SCF 121
+ RE + M L H NI+ F S + + V + + +++ S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 174
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 175 ------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 28 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 84
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 85 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 140 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 199
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 200 LCDFGSAKQLV-------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 251
Query: 229 LAHGRP 234
L G+P
Sbjct: 252 LLLGQP 257
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-----SCF 121
+ RE + M L H NI+ F S + + V + + +++ S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 174
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 175 ------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 7 EDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAID 62
+D T +A Q P P SY IG G +VY+A +C DS +VAIK +
Sbjct: 11 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVL 67
Query: 63 LDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-- 118
D+ + RE + M L H NI+ F S + + V + + +++
Sbjct: 68 QDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 122
Query: 119 ---SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGV 174
S LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG
Sbjct: 123 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 182
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
+ + G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 183 AKQLV-------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 20 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 76
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 77 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 131
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 132 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 191
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 192 LCDFGSAKQLV-------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 243
Query: 229 LAHGRP 234
L G+P
Sbjct: 244 LLLGQP 249
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + + G VYK + IP V VAIK + S I E M
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + +P++ + S + ++M M G L + D + + +
Sbjct: 79 ASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 136
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMAGT 198
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----- 191
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 192 --WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 8 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 64
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-----SCF 121
+ RE + M L H NI+ F S + + V + + +++ S
Sbjct: 65 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 119
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 120 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 178
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 179 ------RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 140/335 (41%), Gaps = 53/335 (15%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 71 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 127
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 128 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 182
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 183 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 242
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 243 LCDFGSAKQLV-------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 294
Query: 229 LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS---------------- 272
L G+P + P S + ++ + + +I++ N ++
Sbjct: 295 LLLGQP----IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVF 350
Query: 273 --RAFKDMVASC---LDQDPSKRPSAEKLMKHSFF 302
R + +A C L+ P+ R + + HSFF
Sbjct: 351 RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + D + + RE + M L +P I+ ++ L +VM G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHK 424
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + +P +A +L + + YL + +HR++ A N+L + K++DFG+S
Sbjct: 425 FLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRP 234
++ ++ SA + W APE I + +S ++D+WS+G+T E L++G+
Sbjct: 484 KALGADDSYYTARSAGKWPLK----WYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQK 538
Query: 235 PLSHL 239
P +
Sbjct: 539 PYKKM 543
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MAHHEQEDQCSSTGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VV 56
M +D T +A Q P P SY IG G +VY+A +C DS +V
Sbjct: 30 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELV 86
Query: 57 AIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQ 114
AIK + D+ + RE + M L H NI+ F S + + V + + +
Sbjct: 87 AIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 141
Query: 115 SIIS-----SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-K 168
++ S LP + + + + +L+Y+H+ G HRD+K N+L D D +V K
Sbjct: 142 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 201
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
L DFG + + G ++ + Y+ APE+I T Y+ D+WS G E
Sbjct: 202 LCDFGSAKQLV-------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAE 253
Query: 229 LAHGRP 234
L G+P
Sbjct: 254 LLLGQP 259
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 51/273 (18%)
Query: 53 STVVAIKAIDLDQSRTDLDSIRRETKTMSLL-SHPNILNAHCSFSVDSRLWVVMPFMSCG 111
S VA+K + ++ +++ E K M+ L SH NI+N + ++ ++++ + G
Sbjct: 75 SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 112 SLQSIISS---------------------------CFPDGLPEPCIAIVLKETLSALSYL 144
L + + S F D L C A + + +L
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLL---CFAY---QVAKGMEFL 188
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
+ +HRD+ A N+L VK+ DFG++ I S++ G+A + WMAP
Sbjct: 189 EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-----WMAP 243
Query: 205 EVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLK 263
E + Y+ K+D+WS+GI E+ + G P +P + + + F+
Sbjct: 244 ESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM-------- 294
Query: 264 IKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKL 296
D+ + ++ SC D KRPS L
Sbjct: 295 --DQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 325
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 129/308 (41%), Gaps = 47/308 (15%)
Query: 17 AQKIQYPLDPSSYKILDEIGVGVSAIVYKAICIPMDST----VVAIKAIDLDQSRTDLDS 72
A K ++P D K+ +G G V +A +D T VA+K + + ++ +
Sbjct: 10 ASKWEFPRD--RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 73 IRRETKTMSLLSH----PNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISS--------- 119
+ E K + + H N+L A C+ L V+ F G+L + + S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGA-CT-KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 120 -----CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGV 174
+ D L + + + +L ++ +HRD+ A NIL VK+ DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 175 SASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGR 233
+ I + G A + WMAPE I Y+ ++D+WSFG+ E+ + G
Sbjct: 186 ARDIXKDPDXVRKGDARLPLK-----WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGA 239
Query: 234 PPLSHLPPEKSLLMKMTQ--RFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
P + ++ ++ + R R DY ++ M+ C +PS+RP
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTT-----------PEMYQTML-DCWHGEPSQRP 287
Query: 292 SAEKLMKH 299
+ +L++H
Sbjct: 288 TFSELVEH 295
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 52 DSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILN--AHCSFSVDSR--LWVVMPF 107
D A+K I L + D + +RE L +HPNIL A+C ++ W+++PF
Sbjct: 53 DGHFYALKRI-LCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 108 MSCGSLQSIISSCFPDG--LPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDG 165
G+L + I G L E I +L L +H +G+ HRD+K NIL +G
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMIT--DMAG---TPYWMAPEV--IRSHTGYSFKAD 218
L D G S+ + H +T D A T + APE+ ++SH + D
Sbjct: 172 QPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD 228
Query: 219 IWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDM 278
+WS G + G P + + + Q L I ++ + S A +
Sbjct: 229 VWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--------NQLSIP-QSPRHSSALWQL 279
Query: 279 VASCLDQDPSKRPSAEKLM 297
+ S + DP +RP L+
Sbjct: 280 LNSMMTVDPHQRPHIPLLL 298
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G VYK D T+VA+K + ++ + + E + +S+ H N+L
Sbjct: 46 LGRGGFGKVYKGRLA--DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGF 103
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCF---PDGLPE---PCIAIVLKETLSALSYLHNQG 148
+ +V P+M+ GS ++SC P+ P P + + L+YLH+
Sbjct: 104 CMTPTERLLVYPYMANGS----VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 159
Query: 149 H---LHRDVKAGNILSDSDGSVKLADFGVSASI-YEPSHHHHHGSAMITDMAGTPYWMAP 204
+HRDVKA NIL D + + DFG++ + Y+ H + + GT +AP
Sbjct: 160 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-------VXXAVRGTIGHIAP 212
Query: 205 EVIRSHTGYSFKADIWSFGITALELAHGR 233
E + S S K D++ +G+ LEL G+
Sbjct: 213 EYL-STGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 20/244 (8%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VAIK + + + E M HPNI+ + + +V M GSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + + L+ S + YL + G +HRD+ A NIL +S+ K++DFG+S
Sbjct: 136 FLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALE-LAHGR 233
+ + +A T P W +PE I ++ ++ +D+WS+GI E +++G
Sbjct: 195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSA 293
P + + ++ + + +R A ++ C +D + RP
Sbjct: 249 RPYWEM-SNQDVIKAVDEGYRLP----------PPMDCPAALYQLMLDCWQKDRNNRPKF 297
Query: 294 EKLM 297
E+++
Sbjct: 298 EQIV 301
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-----SCF 121
+ RE + M L H NI+ F S + + V + + +++ S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 174
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 175 ------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 56 VAIKAIDLD-QSRTDLDS-IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
VA+K I+ +++D+ I RE + LL HP+I+ + + +V+ +
Sbjct: 32 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 91
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
I+ D + E ++ +SA+ Y H +HRD+K N+L D +VK+ADFG
Sbjct: 92 DYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 148
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
+S + + G+ + T G+P + APEVI + D+WS G+
Sbjct: 149 LSNIMTD-------GNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVI-------- 192
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKN-------KKFSRAFKDMVASCLDQD 286
L + + +R F D + K+ + K S ++ L +
Sbjct: 193 -----------LYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 241
Query: 287 PSKRPSAEKLMKHSFFK 303
P R S ++M+ +FK
Sbjct: 242 PLNRISIHEIMQDDWFK 258
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + +G G VYK + IP V VAI + S I E M
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 161
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 162 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 218
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 219 ----WMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 258
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 43/284 (15%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + +D L I+ T++ HPN++ +CS + D L++ + + +LQ
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRYYCSETTDRFLYIALELCNL-NLQD 115
Query: 116 IISSCFPDGLPEPCIAI--------VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS- 166
++ S + + + + +L++ S +++LH+ +HRD+K NIL +
Sbjct: 116 LVES---KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRF 172
Query: 167 ------------VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
+ ++DFG+ + + + +GT W APE++ T
Sbjct: 173 TADQQTGAENLRILISDFGLCKKLDSGQXXFRXN---LNNPSGTSGWRAPELLEESTKRR 229
Query: 215 F--KADIWSFG-ITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKDKNKK 270
DI+S G + L+ G+ P +S +++ FS D K L ++
Sbjct: 230 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI----FSLDEMKCLH----DRS 281
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVK 314
D+++ +D DP KRP+A K+++H F +K +EF +K
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLK 325
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 56 VAIKAIDLD-QSRTDLDS-IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
VA+K I+ +++D+ I RE + LL HP+I+ + + +V+ +
Sbjct: 42 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 101
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
I+ D + E ++ +SA+ Y H +HRD+K N+L D +VK+ADFG
Sbjct: 102 DYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 158
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
+S + + G+ + T G+P + APEVI + D+WS G+
Sbjct: 159 LSNIMTD-------GNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVI-------- 202
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKN-------KKFSRAFKDMVASCLDQD 286
L + + +R F D + K+ + K S ++ L +
Sbjct: 203 -----------LYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 251
Query: 287 PSKRPSAEKLMKHSFFK 303
P R S ++M+ +FK
Sbjct: 252 PLNRISIHEIMQDDWFK 268
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 43/284 (15%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + +D L I+ T++ HPN++ +CS + D L++ + + +LQ
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRYYCSETTDRFLYIALELCNL-NLQD 115
Query: 116 IISSCFPDGLPEPCIAI--------VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS- 166
++ S + + + + +L++ S +++LH+ +HRD+K NIL +
Sbjct: 116 LVES---KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRF 172
Query: 167 ------------VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
+ ++DFG+ + + + +GT W APE++ T
Sbjct: 173 TADQQTGAENLRILISDFGLCKKLDSGQXXFRXN---LNNPSGTSGWRAPELLEESTKRR 229
Query: 215 F--KADIWSFG-ITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKDKNKK 270
DI+S G + L+ G+ P +S +++ FS D K L ++
Sbjct: 230 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI----FSLDEMKCLH----DRS 281
Query: 271 FSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVK 314
D+++ +D DP KRP+A K+++H F +K +EF +K
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLK 325
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 56 VAIKAIDLD-QSRTDLDS-IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
VA+K I+ +++D+ I RE + LL HP+I+ + + +V+ +
Sbjct: 36 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 95
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
I+ D + E ++ +SA+ Y H +HRD+K N+L D +VK+ADFG
Sbjct: 96 DYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 152
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
+S + + G+ + T G+P + APEVI + D+WS G+
Sbjct: 153 LSNIMTD-------GNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVI-------- 196
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKN-------KKFSRAFKDMVASCLDQD 286
L + + +R F D + K+ + K S ++ L +
Sbjct: 197 -----------LYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 245
Query: 287 PSKRPSAEKLMKHSFFK 303
P R S ++M+ +FK
Sbjct: 246 PLNRISIHEIMQDDWFK 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 56 VAIKAIDLD-QSRTDLDS-IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSL 113
VA+K I+ +++D+ I RE + LL HP+I+ + + +V+ +
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 100
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFG 173
I+ D + E ++ +SA+ Y H +HRD+K N+L D +VK+ADFG
Sbjct: 101 DYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 157
Query: 174 VSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGR 233
+S + + G+ + T G+P + APEVI + D+WS G+
Sbjct: 158 LSNIMTD-------GNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVI-------- 201
Query: 234 PPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKN-------KKFSRAFKDMVASCLDQD 286
L + + +R F D + K+ + K S ++ L +
Sbjct: 202 -----------LYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 250
Query: 287 PSKRPSAEKLMKHSFFK 303
P R S ++M+ +FK
Sbjct: 251 PLNRISIHEIMQDDWFK 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 53/323 (16%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + D+
Sbjct: 9 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFK 65
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSF--SVDSRLWVVMPFMSCGSLQSIIS-----SCF 121
+ RE + M L H NI+ F S + + V + + +++ S
Sbjct: 66 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 120
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 121 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV- 179
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLP 240
G ++ + Y+ APE+I T Y+ D+WS G EL G+P +
Sbjct: 180 ------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IF 228
Query: 241 PEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS------------------RAFKDMVASC 282
P S + ++ + + +I++ N ++ R + +A C
Sbjct: 229 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALC 288
Query: 283 ---LDQDPSKRPSAEKLMKHSFF 302
L+ P+ R + + HSFF
Sbjct: 289 SRLLEYTPTARLTPLEACAHSFF 311
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 8/209 (3%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKA-ICIP-MDSTVVAIKAIDLDQSRTDLDSIRRETKTMS 81
+D S KI + IG G V + + P + VAIK + + E M
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSA 140
HPNI+ + + ++ FM G+L S + DG + +L+ S
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASG 128
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
+ YL ++HRD+ A NIL +S+ K++DFG+S + E S + S++ +
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR-- 186
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALEL 229
W APE I + ++ +D WS+GI E+
Sbjct: 187 WTAPEAI-AFRKFTSASDAWSYGIVMWEV 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 136/323 (42%), Gaps = 53/323 (16%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDST-VVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + ++
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQGKAFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSFSV------DSRLWVVMPFMSCGSLQSII-SSCF 121
+ RE + M L H NI+ F + L +V+ ++ + S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRA 115
Query: 122 PDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIYE 180
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 181 PSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLP 240
G ++ + Y+ APE+I T Y+ D+WS G EL G+P +
Sbjct: 176 -------GEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IF 223
Query: 241 PEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS------------------RAFKDMVASC 282
P S + ++ + + +I++ N ++ R + +A C
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALC 283
Query: 283 ---LDQDPSKRPSAEKLMKHSFF 302
L+ P+ R + + HSFF
Sbjct: 284 SRLLEYTPTARLTPLEACAHSFF 306
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + + G VYK + IP V VAIK + S I E M
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 127
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 185 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + +K + + G VYK + IP V VAIK + S I E M
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 81 SLLSHPNI--LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETL 138
+ + +P++ L C S + +MPF G L + D + + +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPF---GCLLDYVRE-HKDNIGSQYLLNWCVQIA 134
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI--YEPSHHHHHGSAMITDMA 196
++YL ++ +HRD+ A N+L + VK+ DFG++ + E +H G I
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I H Y+ ++D+WS+G+T EL G P +P
Sbjct: 192 ----WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKA-ICIP-MDSTVVAIKAIDLDQSRTDLDSIRRETKTMS 81
+D S KI + IG G V + + P + VAIK + + E M
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 72
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEPCIAIVLKETLSA 140
HPNI+ + + ++ FM G+L S + DG + +L+ S
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASG 130
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
+ YL ++HRD+ A NIL +S+ K++DFG+S + E S S++ +
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP--IR 188
Query: 201 WMAPEVIRSHTGYSFKADIWSFGITALEL 229
W APE I + ++ +D WS+GI E+
Sbjct: 189 WTAPEAI-AFRKFTSASDAWSYGIVMWEV 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 51/313 (16%)
Query: 27 SSYKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIR---RETKTMSLL 83
S Y L +G G + +V+ A+ D V AIK I L TD S++ RE K + L
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRV-AIKKIVL----TDPQSVKHALREIKIIRRL 65
Query: 84 SHPNILNAH--------------CSFSVDSRLWVVMPFMSCGSLQSIISSCFPDG-LPEP 128
H NI+ S + + +++V +M ++ +++ G L E
Sbjct: 66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEE 120
Query: 129 CIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDS-DGSVKLADFGVSASIYEPSHHHHH 187
+ + + L L Y+H+ LHRD+K N+ ++ D +K+ DFG+ A I +P H+ H
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGL-ARIMDP-HYSHK 178
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP------------- 234
G +++ T ++ +P ++ S Y+ D+W+ G E+ G+
Sbjct: 179 GH--LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236
Query: 235 -----PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSK 289
P+ H + LL + R E + SR D + L P
Sbjct: 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMD 296
Query: 290 RPSAEKLMKHSFF 302
R +AE+ + H +
Sbjct: 297 RLTAEEALSHPYM 309
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 33/249 (13%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K D + + + E M L HP+I+ + W++M G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGH 97
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + L + + + A++YL + +HRD+ NIL S VKL DFG+S
Sbjct: 98 YLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRP 234
I + ++ A +T + WM+PE I + ++ +D+W F + E L+ G+
Sbjct: 157 RYIEDEDYY----KASVTRLPIK--WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQ 209
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSR------AFKDMVASCLDQDPS 288
P F + + + + + +K + + ++ C D DPS
Sbjct: 210 P-----------------FFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 252
Query: 289 KRPSAEKLM 297
RP +L+
Sbjct: 253 DRPRFTELV 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 33/249 (13%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K D + + + E M L HP+I+ + W++M G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGH 113
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + L + + + A++YL + +HRD+ NIL S VKL DFG+S
Sbjct: 114 YLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRP 234
I + ++ A +T + WM+PE I + ++ +D+W F + E L+ G+
Sbjct: 173 RYIEDEDYY----KASVTRLPIK--WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQ 225
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSR------AFKDMVASCLDQDPS 288
P F + + + + + +K + + ++ C D DPS
Sbjct: 226 P-----------------FFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 268
Query: 289 KRPSAEKLM 297
RP +L+
Sbjct: 269 DRPRFTELV 277
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 33/249 (13%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K D + + + E M L HP+I+ + W++M G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGH 101
Query: 116 IISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS 175
+ + L + + + A++YL + +HRD+ NIL S VKL DFG+S
Sbjct: 102 YLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
Query: 176 ASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRP 234
I + ++ A +T + WM+PE I + ++ +D+W F + E L+ G+
Sbjct: 161 RYIEDEDYY----KASVTRLPIK--WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQ 213
Query: 235 PLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSR------AFKDMVASCLDQDPS 288
P F + + + + + +K + + ++ C D DPS
Sbjct: 214 P-----------------FFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 256
Query: 289 KRPSAEKLM 297
RP +L+
Sbjct: 257 DRPRFTELV 265
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 59/316 (18%)
Query: 14 GTIAQKIQYPLDPSSYKILDE--------IGVGVSAIVYKAIC----IPMDSTVVAIKAI 61
G + +K++ DP+ Y +LD IG G V KA + MD+ AIK +
Sbjct: 1 GALNRKVKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA---AIKRM 57
Query: 62 DLDQSRTDLDSIRRETKTMSLLSH-PNILNAHCSFSVDSRLWVVMPFMSCGSLQSII-SS 119
S+ D E + + L H PNI+N + L++ + + G+L + S
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 117
Query: 120 CFPDGLPEPCIAIVLKETLSA-------------LSYLHNQGHLHRDVKAGNILSDSDGS 166
+ P IA TLS+ + YL + +HR++ A NIL +
Sbjct: 118 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYV 177
Query: 167 VKLADFGVSAS--IYEPSHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFG 223
K+ADFG+S +Y + M P WMA E + +++ Y+ +D+WS+G
Sbjct: 178 AKIADFGLSRGQEVY-----------VKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYG 225
Query: 224 ITALELAH--GRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVAS 281
+ E+ G P E L K+ Q +R EK L D+ D++
Sbjct: 226 VLLWEIVSLGGTPYCGMTCAE--LYEKLPQGYRL---EKPLNCDDE-------VYDLMRQ 273
Query: 282 CLDQDPSKRPSAEKLM 297
C + P +RPS +++
Sbjct: 274 CWREKPYERPSFAQIL 289
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 128/288 (44%), Gaps = 47/288 (16%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + +D L I+ T++ HPN++ +CS + D L++ + + +LQ
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRYYCSETTDRFLYIALELCNL-NLQD 97
Query: 116 IISSCFPDGLPEPCIAI--------VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS- 166
++ S + + + + +L++ S +++LH+ +HRD+K NIL +
Sbjct: 98 LVES---KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRF 154
Query: 167 ------------VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
+ ++DFG+ + + + +GT W APE++
Sbjct: 155 TADQQTGAENLRILISDFGLCKKLDSGQXXFRXN---LNNPSGTSGWRAPELLEESNNLQ 211
Query: 215 FK------ADIWSFG-ITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKD 266
K DI+S G + L+ G+ P +S ++ R FS D K L
Sbjct: 212 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII----RGIFSLDEMKCLH--- 264
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVK 314
++ D+++ +D DP KRP+A K+++H F +K +EF +K
Sbjct: 265 -DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLK 311
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH------CSFSVDSRLWVVMPFMS 109
VAIK + S + + E + M L+HPN+++A + + + M +
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 110 CGSLQSIIS---SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS 166
G L+ ++ +C GL E I +L + SAL YLH +HRD+K NI+
Sbjct: 103 GGDLRKYLNQFENCC--GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 160
Query: 167 V---KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFG 223
K+ D G + + + + T+ GT ++APE++ Y+ D WSFG
Sbjct: 161 RLIHKIIDLGYAKELDQ--------GELCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFG 211
Query: 224 ITALELAHG-RPPLSHLPP 241
A E G RP L + P
Sbjct: 212 TLAFECITGFRPFLPNWQP 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAH------CSFSVDSRLWVVMPFMS 109
VAIK + S + + E + M L+HPN+++A + + + M +
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 110 CGSLQSIIS---SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS 166
G L+ ++ +C GL E I +L + SAL YLH +HRD+K NI+
Sbjct: 102 GGDLRKYLNQFENCC--GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159
Query: 167 V---KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFG 223
K+ D G + + + + T+ GT ++APE++ Y+ D WSFG
Sbjct: 160 RLIHKIIDLGYAKELDQ--------GELCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFG 210
Query: 224 ITALELAHG-RPPLSHLPP 241
A E G RP L + P
Sbjct: 211 TLAFECITGFRPFLPNWQP 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 35 IGVGVSAIVYKAICIPMDS-TVVAIKAID-----LDQSRTDLDSIRRETKTMSLLSHPNI 88
IG G VY C D+ + A+K +D + Q T + R +S P I
Sbjct: 196 IGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 253
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ +F +L ++ M+ G L +S E + E + L ++HN+
Sbjct: 254 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF 311
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
++RD+K NIL D G V+++D G++ S H S GT +MAPEV++
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPHAS------VGTHGYMAPEVLQ 362
Query: 209 SHTGYSFKADIWSFGITALELAHGRPPL-SHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
Y AD +S G +L G P H +K + +MT +++ D
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-------AVELPD- 414
Query: 268 NKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKNCNKGVEFFVK 314
FS + ++ L +D ++R A+++ + FF++ + + F K
Sbjct: 415 --SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK 464
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 125/299 (41%), Gaps = 48/299 (16%)
Query: 22 YP-LDPSSYKILDEIGVGVSAIVYKAIC----IPMDSTVVAIKAIDLDQSRTDLDSIRRE 76
YP LD + K D IG G V KA + MD+ AIK + S+ D E
Sbjct: 9 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA---AIKRMKEYASKDDHRDFAGE 65
Query: 77 TKTMSLLSH-PNILNAHCSFSVDSRLWVVMPFMSCGSLQSII-SSCFPDGLPEPCIAIVL 134
+ + L H PNI+N + L++ + + G+L + S + P IA
Sbjct: 66 LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 125
Query: 135 KETLSA-------------LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
TLS+ + YL + +HRD+ A NIL + K+ADFG+S
Sbjct: 126 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---- 181
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALELAH--GRPPLSH 238
+ M P WMA E + +++ Y+ +D+WS+G+ E+ G P
Sbjct: 182 -----QEVYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 235
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
E L K+ Q +R EK L D+ D++ C + P +RPS +++
Sbjct: 236 TCAE--LYEKLPQGYRL---EKPLNCDDE-------VYDLMRQCWREKPYERPSFAQIL 282
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 35 IGVGVSAIVYKAICIPMDS-TVVAIKAID-----LDQSRTDLDSIRRETKTMSLLSHPNI 88
IG G VY C D+ + A+K +D + Q T + R +S P I
Sbjct: 197 IGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 89 LNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQG 148
+ +F +L ++ M+ G L +S E + E + L ++HN+
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 149 HLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIR 208
++RD+K NIL D G V+++D G++ S H S GT +MAPEV++
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPHAS------VGTHGYMAPEVLQ 363
Query: 209 SHTGYSFKADIWSFGITALELAHGRPPL-SHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK 267
Y AD +S G +L G P H +K + +MT +++ D
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-------AVELPD- 415
Query: 268 NKKFSRAFKDMVASCLDQDPSKR-----PSAEKLMKHSFFKNCNKGVEFFVK 314
FS + ++ L +D ++R A+++ + FF++ + + F K
Sbjct: 416 --SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK 465
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 128/288 (44%), Gaps = 47/288 (16%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + +D L I+ T++ HPN++ +CS + D L++ + + +LQ
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRYYCSETTDRFLYIALELCNL-NLQD 97
Query: 116 IISSCFPDGLPEPCIAI--------VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS- 166
++ S + + + + +L++ S +++LH+ +HRD+K NIL +
Sbjct: 98 LVES---KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRF 154
Query: 167 ------------VKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYS 214
+ ++DFG+ + + + +GT W APE++
Sbjct: 155 TADQQTGAENLRILISDFGLCKKL---DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ 211
Query: 215 FK------ADIWSFG-ITALELAHGRPPLSHLPPEKSLLMKMTQRFRFS-DYEKTLKIKD 266
K DI+S G + L+ G+ P +S ++ R FS D K L
Sbjct: 212 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII----RGIFSLDEMKCLH--- 264
Query: 267 KNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNKGVEFFVK 314
++ D+++ +D DP KRP+A K+++H F +K +EF +K
Sbjct: 265 -DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLK 311
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 125/299 (41%), Gaps = 48/299 (16%)
Query: 22 YP-LDPSSYKILDEIGVGVSAIVYKAIC----IPMDSTVVAIKAIDLDQSRTDLDSIRRE 76
YP LD + K D IG G V KA + MD+ AIK + S+ D E
Sbjct: 19 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA---AIKRMKEYASKDDHRDFAGE 75
Query: 77 TKTMSLLSH-PNILNAHCSFSVDSRLWVVMPFMSCGSLQSII-SSCFPDGLPEPCIAIVL 134
+ + L H PNI+N + L++ + + G+L + S + P IA
Sbjct: 76 LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 135
Query: 135 KETLSA-------------LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEP 181
TLS+ + YL + +HRD+ A NIL + K+ADFG+S
Sbjct: 136 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---- 191
Query: 182 SHHHHHGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALELAH--GRPPLSH 238
+ M P WMA E + +++ Y+ +D+WS+G+ E+ G P
Sbjct: 192 -----QEVYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245
Query: 239 LPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLM 297
E L K+ Q +R EK L D+ D++ C + P +RPS +++
Sbjct: 246 TCAE--LYEKLPQGYRL---EKPLNCDDE-------VYDLMRQCWREKPYERPSFAQIL 292
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 42/225 (18%)
Query: 35 IGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI--L 89
+G G VYK I IP V VAIK + + S I E M+ + P + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 90 NAHCSFSVDSRLWVVMPFMSC---------GSL--QSIISSCFPDGLPEPCIAIVLKETL 138
C S + +MP+ C G L Q +++ C +
Sbjct: 85 LGICLTSTVQLVTQLMPY-GCLLDHVRENRGRLGSQDLLNWCM--------------QIA 129
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVS--ASIYEPSHHHHHGSAMITDMA 196
+SYL + +HRD+ A N+L S VK+ DFG++ I E +H G I
Sbjct: 130 KGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK--- 186
Query: 197 GTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I ++ ++D+WS+G+T EL G P +P
Sbjct: 187 ----WMALESILRRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIP 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 54/277 (19%)
Query: 60 AIDLDQSRTDLDSIRRETKTMS--LLSHPNIL----NAHCSFSVDSRLWVVMPFMSCGSL 113
A+ + SR D S RET+ + +L H NIL + S ++LW++ + GSL
Sbjct: 35 AVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSL 93
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLH-----NQGH---LHRDVKAGNILSDSDG 165
+ D + C+ IVL S L++LH QG HRD+K+ NIL +G
Sbjct: 94 YDYLQLTTLDTVS--CLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV----IRSHTGYSFK-ADIW 220
+AD G++ + ++ G+ GT +MAPEV I+ S+K DIW
Sbjct: 151 QCCIADLGLAVMHSQSTNQLDVGN---NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW 207
Query: 221 SFGITALELAHG----------RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK--- 267
+FG+ E+A +PP + P F D K + + +
Sbjct: 208 AFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP---------SFEDMRKVVCVDQQRPN 258
Query: 268 --NKKFS----RAFKDMVASCLDQDPSKRPSAEKLMK 298
N+ FS + ++ C Q+PS R +A ++ K
Sbjct: 259 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + ++
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQGKAFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSFSV------DSRLWVVMPFMSCGSLQSIIS--SC 120
+ RE + M L H NI+ F + L +V+ ++ ++ + S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSR 114
Query: 121 FPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIY 179
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 180 EPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
G ++ + Y+ APE+I T Y+ D+WS G EL G+P
Sbjct: 175 -------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 54/277 (19%)
Query: 60 AIDLDQSRTDLDSIRRETKTMS--LLSHPNIL----NAHCSFSVDSRLWVVMPFMSCGSL 113
A+ + SR D S RET+ + +L H NIL + S ++LW++ + GSL
Sbjct: 35 AVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSL 93
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLH-----NQGH---LHRDVKAGNILSDSDG 165
+ D + C+ IVL S L++LH QG HRD+K+ NIL +G
Sbjct: 94 YDYLQLTTLDTVS--CLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV----IRSHTGYSFK-ADIW 220
+AD G++ + ++ G+ GT +MAPEV I+ S+K DIW
Sbjct: 151 QCCIADLGLAVMHSQSTNQLDVGN---NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW 207
Query: 221 SFGITALELAHG----------RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK--- 267
+FG+ E+A +PP + P F D K + + +
Sbjct: 208 AFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP---------SFEDMRKVVCVDQQRPN 258
Query: 268 --NKKFS----RAFKDMVASCLDQDPSKRPSAEKLMK 298
N+ FS + ++ C Q+PS R +A ++ K
Sbjct: 259 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 55/324 (16%)
Query: 13 TGTIAQKIQYPLDPS--SYKILDEIGVGVSAIVYKA-ICIPMDS-TVVAIKAIDLDQSRT 68
T +A Q P P SY IG G +VY+A +C DS +VAIK + ++
Sbjct: 4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQGKAFK 60
Query: 69 DLDSIRRETKTMSLLSHPNILNAHCSFSV------DSRLWVVMPFMSCGSLQSIIS--SC 120
+ RE + M L H NI+ F + L +V+ ++ ++ + S
Sbjct: 61 N-----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSR 114
Query: 121 FPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSV-KLADFGVSASIY 179
LP + + + + +L+Y+H+ G HRD+K N+L D D +V KL DFG + +
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 180 EPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHL 239
G ++ + Y+ APE+I T Y+ D+WS G EL G+P +
Sbjct: 175 -------RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----I 222
Query: 240 PPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFS------------------RAFKDMVAS 281
P S + ++ + + +I++ N ++ R + +A
Sbjct: 223 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIAL 282
Query: 282 C---LDQDPSKRPSAEKLMKHSFF 302
C L+ P+ R + + HSFF
Sbjct: 283 CSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 27/262 (10%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K I + Q T + R +S P I+ +F +L ++ M+ G L +S
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
E + E + L ++HN+ ++RD+K NIL D G V+++D G++
Sbjct: 285 Q--HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL-S 237
S H S GT +MAPEV++ Y AD +S G +L G P
Sbjct: 343 ---SKKKPHAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
Query: 238 HLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PS 292
H +K + +MT +++ D FS + ++ L +D ++R
Sbjct: 394 HKTKDKHEIDRMTLTM-------AVELPD---SFSPELRSLLEGLLQRDVNRRLGCLGRG 443
Query: 293 AEKLMKHSFFKNCNKGVEFFVK 314
A+++ + FF++ + + F K
Sbjct: 444 AQEVKESPFFRSLDWQMVFLQK 465
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 27/262 (10%)
Query: 59 KAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIIS 118
K I + Q T + R +S P I+ +F +L ++ M+ G L +S
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 119 SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASI 178
E + E + L ++HN+ ++RD+K NIL D G V+++D G++
Sbjct: 285 Q--HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 179 YEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPL-S 237
S H S GT +MAPEV++ Y AD +S G +L G P
Sbjct: 343 ---SKKKPHAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
Query: 238 HLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKR-----PS 292
H +K + +MT +++ D FS + ++ L +D ++R
Sbjct: 394 HKTKDKHEIDRMTLTM-------AVELPD---SFSPELRSLLEGLLQRDVNRRLGCLGRG 443
Query: 293 AEKLMKHSFFKNCNKGVEFFVK 314
A+++ + FF++ + + F K
Sbjct: 444 AQEVKESPFFRSLDWQMVFLQK 465
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 38/285 (13%)
Query: 27 SSYKILDEIGVGVSAIVYKAICI---PMDST-VVAIKAIDLDQSRTDL-DSIRRETKTMS 81
S+ + ++E+G VYK P + T VAIK + D++ L + R E +
Sbjct: 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRA 84
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFP--------------DGLPE 127
L HPN++ + D L ++ + S G L + P L
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 128 PCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHH 187
P ++ + + + YL + +H+D+ N+L +VK++D G+ +Y ++
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLL 246
G++++ WMAPE I + +S +DIWS+G+ E+ ++G P + +
Sbjct: 205 GNSLLPIR-----WMAPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258
Query: 247 MKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
M + + L D + A ++ C ++ PS+RP
Sbjct: 259 MIRNR--------QVLPCPDDCPAWVYA---LMIECWNEFPSRRP 292
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 38/285 (13%)
Query: 27 SSYKILDEIGVGVSAIVYKAICI---PMDST-VVAIKAIDLDQSRTDL-DSIRRETKTMS 81
S+ + ++E+G VYK P + T VAIK + D++ L + R E +
Sbjct: 9 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRA 67
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFP--------------DGLPE 127
L HPN++ + D L ++ + S G L + P L
Sbjct: 68 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 128 PCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHH 187
P ++ + + + YL + +H+D+ N+L +VK++D G+ +Y ++
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLL 246
G++++ WMAPE I + +S +DIWS+G+ E+ ++G P + +
Sbjct: 188 GNSLLPIR-----WMAPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 241
Query: 247 MKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP 291
M + + L D + A ++ C ++ PS+RP
Sbjct: 242 MIRNR--------QVLPCPDDCPAWVYA---LMIECWNEFPSRRP 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 43/280 (15%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTD-------LDSIRRETKTMS 81
Y + +G G V+ A+ + VV +K I ++ D L + E +S
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVV-VKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 82 LLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP---EPCIAIVLKETL 138
+ H NI+ F +VM G + F D P EP + + ++ +
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSG----LDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 139 SALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGT 198
SA+ YL + +HRD+K NI+ D ++KL DFG +A + G T GT
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA-------YLERGKLFYT-FCGT 192
Query: 199 PYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
+ APEV+ + + ++WS G+T L P F +
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP-------------------FCEL 233
Query: 259 EKTLKIKDKNKKF-SRAFKDMVASCLDQDPSKRPSAEKLM 297
E+T++ S+ +V+ L P +R + EKL+
Sbjct: 234 EETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLV 273
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 54/277 (19%)
Query: 60 AIDLDQSRTDLDSIRRETKTMS--LLSHPNILNAHCSFSVD----SRLWVVMPFMSCGSL 113
A+ + SR D S RET+ + +L H NIL S ++LW++ + GSL
Sbjct: 64 AVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSL 122
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLSALSYLH-----NQGH---LHRDVKAGNILSDSDG 165
+ D + C+ IVL S L++LH QG HRD+K+ NIL +G
Sbjct: 123 YDYLQLTTLDTVS--CLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 179
Query: 166 SVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV----IRSHTGYSFK-ADIW 220
+AD G++ + ++ G+ GT +MAPEV I+ S+K DIW
Sbjct: 180 QCCIADLGLAVMHSQSTNQLDVGN---NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW 236
Query: 221 SFGITALELAHG----------RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDK--- 267
+FG+ E+A +PP + P F D K + + +
Sbjct: 237 AFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP---------SFEDMRKVVCVDQQRPN 287
Query: 268 --NKKFS----RAFKDMVASCLDQDPSKRPSAEKLMK 298
N+ FS + ++ C Q+PS R +A ++ K
Sbjct: 288 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 324
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 43/302 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDL-DSIRRETKTMSLLSHPN 87
Y+ + ++G G VYKAI + TV AIK I L+ + + RE + L H N
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETV-AIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 88 ILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV---LKETLSALSYL 144
I+ + RL ++ + L+ + D P+ + ++ L + ++ +++
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAE-NDLKK-----YMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 145 HNQGHLHRDVKAGN-ILSDSDGS----VKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
H++ LHRD+K N +LS SD S +K+ DFG++ + P H T
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-------TL 201
Query: 200 YWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSD-- 257
++ PE++ YS DIWS E+ + PL E L K+ + D
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFEVLGLPDDT 260
Query: 258 -YEKTLKIKDKNKKF----SRAFKDMVA------------SCLDQDPSKRPSAEKLMKHS 300
+ + D + F + K ++ + L+ DP KR SA+ ++H
Sbjct: 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320
Query: 301 FF 302
+F
Sbjct: 321 YF 322
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ +++M M+ G L+S
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 197
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 251
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 252 EIFS----LGYMPYPSKS 265
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 24 LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQSRTDLDSIRRETKTM 80
L + K + +G G VYK I +P TV VAIK ++ E M
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 81 SLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSA 140
+ + HP+++ + + +V M G L + D + + +
Sbjct: 72 ASMDHPHLVRL-LGVCLSPTIQLVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAKG 129
Query: 141 LSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY 200
+ YL + +HRD+ A N+L S VK+ DFG+ A + E ++ D P
Sbjct: 130 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL-ARLLEGDEKEYNA-----DGGKMPI 183
Query: 201 -WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
WMA E I + ++ ++D+WS+G+T EL G P +P
Sbjct: 184 KWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S L+H NI+ ++++ M+ G L+S
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 197
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 251
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 252 EIFS----LGYMPYPSKS 265
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ +++M M+ G L+S
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 236
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 237 EIFS----LGYMPYPSKS 250
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S L+H NI+ ++++ M+ G L+S
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 183
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 237
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 238 EIFS----LGYMPYPSKS 251
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
A+K + L+ R + E + LS P I+ + + + + M + GSL
Sbjct: 100 CAVKKVRLEVFRVE------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 153
Query: 116 IIS--SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS-VKLADF 172
+I C LPE L + L L YLH + LH DVKA N+L SDGS L DF
Sbjct: 154 LIKQMGC----LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDF 209
Query: 173 GVSASIYEPSHHHHHGSAMITD--MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
G A +P G +++T + GT MAPEV+ K DIWS L +
Sbjct: 210 G-HALCLQPD---GLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHML 264
Query: 231 HGRPPLSH 238
+G P +
Sbjct: 265 NGCHPWTQ 272
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
A+K + L+ R + E + LS P I+ + + + + M + GSL
Sbjct: 102 CAVKKVRLEVFRVE------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 155
Query: 116 IIS--SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS-VKLADF 172
+I C LPE L + L L YLH + LH DVKA N+L SDGS L DF
Sbjct: 156 LIKQMGC----LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDF 211
Query: 173 GVSASIYEPSHHHHHGSAMITD--MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
G A +P G +++T + GT MAPEV+ K DIWS L +
Sbjct: 212 G-HALCLQPD---GLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHML 266
Query: 231 HGRPPLSH 238
+G P +
Sbjct: 267 NGCHPWTQ 274
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
+G G VYK D +VA+K + ++++ + E + +S+ H N+L
Sbjct: 38 LGRGGFGKVYKGRLA--DGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCF---PDGLPE---PCIAIVLKETLSALSYLHNQG 148
+ +V P+M+ GS ++SC P+ P P + + L+YLH+
Sbjct: 96 CMTPTERLLVYPYMANGS----VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151
Query: 149 H---LHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
+HRDVKA NIL D + + DFG++ + + H + G +APE
Sbjct: 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDXHVXXAVRGXIGH---IAPE 205
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGR 233
+ S S K D++ +G+ LEL G+
Sbjct: 206 YL-STGKSSEKTDVFGYGVMLLELITGQ 232
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
A+K + L+ R + E + LS P I+ + + + + M + GSL
Sbjct: 86 CAVKKVRLEVFRVE------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 139
Query: 116 IIS--SCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS-VKLADF 172
+I C LPE L + L L YLH + LH DVKA N+L SDGS L DF
Sbjct: 140 LIKQMGC----LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDF 195
Query: 173 GVSASIYEPSHHHHHGSAMITD--MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
G A +P G +++T + GT MAPEV+ K DIWS L +
Sbjct: 196 G-HALCLQPD---GLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHML 250
Query: 231 HGRPPLSH 238
+G P +
Sbjct: 251 NGCHPWTQ 258
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 197
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 251
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 252 EIFS----LGYMPYPSKS 265
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 150 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 209
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 210 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 263
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 264 EIFS----LGYMPYPSKS 277
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVA--IKAIDLDQSRTDLDSIRRETKTM-SLLSH 85
Y+++ ++G G + V++AI I + VV +K + ++ I+RE K + +L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK-------IKREIKILENLRGG 91
Query: 86 PNILN-AHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYL 144
PNI+ A SR P + + + L + I + E L AL Y
Sbjct: 92 PNIITLADIVKDPVSR----TPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 145 HNQGHLHRDVKAGNILSDSD-GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMA 203
H+ G +HRDVK N++ D + ++L D+G+ A Y P ++ A + Y+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL-AEFYHPGQEYNVRVA-------SRYFKG 199
Query: 204 PEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
PE++ + Y + D+WS G + + P H
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 25/278 (8%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
Y I +++G G IV++ + T +A K + + TD +++E +++ H NI
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMA-KFVKVKG--TDQVLVKKEISILNIARHRNI 63
Query: 89 LNAHCSFSVDSRLWVVMPFMS-CGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQ 147
L+ H SF L ++ F+S + I +S F L E I + + AL +LH+
Sbjct: 64 LHLHESFESMEELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEALQFLHSH 121
Query: 148 GHLHRDVKAGNILSDS--DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPE 205
H D++ NI+ + ++K+ +FG A +P + + P + APE
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDN-------FRLLFTAPEYYAPE 173
Query: 206 VIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIK 265
V H S D+WS G L G P ++ + M + F +
Sbjct: 174 V-HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE-------- 224
Query: 266 DKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMKHSFFK 303
+ K+ S D V L ++ R +A + ++H + K
Sbjct: 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 15/236 (6%)
Query: 11 SSTGTIAQKIQYP-LDPSSYKILDEIGVGVSAIVYKAICIPMDSTV---VAIKAIDLDQS 66
+ +GT + Q L + K + +G G VYK I +P TV VAIK ++
Sbjct: 21 TPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG 80
Query: 67 RTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP 126
E M+ + HP+++ + + +V M G L + D +
Sbjct: 81 PKANVEFMDEALIMASMDHPHLVRL-LGVCLSPTIQLVTQLMPHGCLLEYVHE-HKDNIG 138
Query: 127 EPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH 186
+ + + YL + +HRD+ A N+L S VK+ DFG+ A + E +
Sbjct: 139 SQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL-ARLLEGDEKEY 197
Query: 187 HGSAMITDMAGTPY-WMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLP 240
+ D P WMA E I + ++ ++D+WS+G+T EL G P +P
Sbjct: 198 NA-----DGGKMPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 140 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 199
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 200 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 253
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 254 EIFS----LGYMPYPSKS 267
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 183
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 184 KIGDFGMAQDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 237
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 238 EIFS----LGYMPYPSKS 251
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQ 114
VA+K + + +++ E K MS L H NI+N + + + V+ + G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 115 SIISSCFPDGL---------PEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNIL 160
+ + P GL PE ++ + +++L ++ +HRDV A N+L
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 198
Query: 161 SDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIW 220
+ K+ DFG++ I S++ G+A + WMAPE I Y+ ++D+W
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-----WMAPESIFDCV-YTVQSDVW 252
Query: 221 SFGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK---- 276
S+GI E+ L P +L+ S + K +KD + AF
Sbjct: 253 SYGILLWEIFS-----LGLNPYPGILVN-------SKFYKL--VKDGYQMAQPAFAPKNI 298
Query: 277 -DMVASCLDQDPSKRPSAEKL 296
++ +C +P+ RP+ +++
Sbjct: 299 YSIMQACWALEPTHRPTFQQI 319
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 36/174 (20%)
Query: 136 ETLSALSYLHNQGHLHRDVKAGNILSD-SDGSVKLADFGVSASIYEPSHHHHHGSAMITD 194
+ ++A+ + H++G +HRD+K NIL D G KL DFG A +++ + TD
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---------TD 197
Query: 195 MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSHLPPEKSLLMKMTQRFR 254
GT + PE I H ++ A +WS GI ++ G P
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP------------------- 238
Query: 255 FSDYEKTLKIKDKNKKF----SRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKN 304
+E+ +I + F S ++ CL PS RPS E+++ + +
Sbjct: 239 ---FERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 130 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 189
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 190 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 243
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 244 EIFS----LGYMPYPSKS 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
+K ++ IG G V+KA +D IK + + + + RE K ++ L H NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKH-RIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVNI 66
Query: 89 LNAH-C--SFSVD--------SR-----LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAI 132
++ + C F D SR L++ M F G+L+ I + L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 133 VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMI 192
+ ++ + Y+H++ ++RD+K NI VK+ DFG+ S+
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS----- 181
Query: 193 TDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
GT +M+PE I S Y + D+++ G+ EL H
Sbjct: 182 ---KGTLRYMSPEQISSQD-YGKEVDLYALGLILAELLH 216
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 183
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 237
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 238 EIFS----LGYMPYPSKS 251
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 236
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 237 EIFS----LGYMPYPSKS 250
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 140 ALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTP 199
+ +L ++ +HRD+ A NIL + VK+ DFG++ IY+ + G +
Sbjct: 211 GMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK---- 266
Query: 200 YWMAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPPLSHLPPEKSLLMKMTQRFRFSDY 258
WMAPE I YS K+D+WS+G+ E+ + G P + ++ ++ + R
Sbjct: 267 -WMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAP 324
Query: 259 EKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
E + + ++ C +DP +RP +L++
Sbjct: 325 EYS----------TPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 20/189 (10%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
A+K + L+ R + E + L+ P I+ + + + + M + GSL
Sbjct: 121 CAVKKVRLEVFRAE------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 174
Query: 116 II--SSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS-VKLADF 172
++ C LPE L + L L YLH++ LH DVKA N+L SDGS L DF
Sbjct: 175 LVKEQGC----LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDF 230
Query: 173 GVSASIYEPSHHHHHGSAMITD--MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
G A +P G +++T + GT MAPEV+ + K D+WS L +
Sbjct: 231 G-HAVCLQPD---GLGKSLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHML 285
Query: 231 HGRPPLSHL 239
+G P +
Sbjct: 286 NGCHPWTQF 294
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 115 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 174
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY S++ G AM+ WM PE ++ K D WSFG+
Sbjct: 175 KIGDFGMARDIYRASYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 228
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 229 EIFS----LGYMPYPSKS 242
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 101 LWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNIL 160
L +V + G L S I E + + K A+ YLH+ HRDVK N+L
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 161 SDS---DGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKA 217
S + +KL DFG + E + H+ +T TPY++APEV+ Y
Sbjct: 194 YTSKRPNAILKLTDFGFAK---ETTSHNS-----LTTPCYTPYYVAPEVLGPEK-YDKSC 244
Query: 218 DIWSFGITALELAHGRPP------LSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKF 271
D WS G+ L G PP L+ P K+ R R YE + +
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSNHGLAISPGXKT-------RIRXGQYEFP---NPEWSEV 294
Query: 272 SRAFKDMVASCLDQDPSKRPSAEKLMKHSFFKNCNK 307
S K ++ + L +P++R + + H + K
Sbjct: 295 SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTK 330
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 164 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY ++ G AM+ WM PE ++ K D WSFG+
Sbjct: 224 KIGDFGMARDIYRAGYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 277
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 278 EIFS----LGYMPYPSKS 291
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 20/189 (10%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
A+K + L+ R + E + L+ P I+ + + + + M + GSL
Sbjct: 102 CAVKKVRLEVFRAE------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 155
Query: 116 II--SSCFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS-VKLADF 172
++ C LPE L + L L YLH++ LH DVKA N+L SDGS L DF
Sbjct: 156 LVKEQGC----LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDF 211
Query: 173 GVSASIYEPSHHHHHGSAMITD--MAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELA 230
G A +P G ++T + GT MAPEV+ + K D+WS L +
Sbjct: 212 G-HAVCLQPD---GLGKDLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHML 266
Query: 231 HGRPPLSHL 239
+G P +
Sbjct: 267 NGCHPWTQF 275
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQS 115
VA+K + S D E +S +H NI+ ++++ M+ G L+S
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 116 IISSCFPDGLPEPCIAI-----VLKETLSALSYLHNQGHLHRDVKAGNILSDSDGS---V 167
+ P +A+ V ++ YL +HRD+ A N L G
Sbjct: 141 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 200
Query: 168 KLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITAL 227
K+ DFG++ IY ++ G AM+ WM PE ++ K D WSFG+
Sbjct: 201 KIGDFGMARDIYRAGYYRKGGCAMLPVK-----WMPPEAFMEGI-FTSKTDTWSFGVLLW 254
Query: 228 ELAHGRPPLSHLP-PEKS 244
E+ L ++P P KS
Sbjct: 255 EIFS----LGYMPYPSKS 268
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 25/245 (10%)
Query: 52 DSTVVAIKAIDLDQSRTDLDS-IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSC 110
D+T+VA+K+ + DL + +E + + SHPNI+ + +++VM +
Sbjct: 138 DNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 111 GSLQSIISSCFPDG--LPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
G + + + +G L + ++ + + + YL ++ +HRD+ A N L +K
Sbjct: 197 GDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
++DFG+S + + G + W APE + ++ YS ++D+WSFGI E
Sbjct: 254 ISDFGMSREEADGVYAASGGLRQVPVK-----WTAPEAL-NYGRYSSESDVWSFGILLWE 307
Query: 229 -LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDP 287
+ G P +L ++ T+ F EK ++ F+ ++ C +P
Sbjct: 308 TFSLGASPYPNLSNQQ------TREF----VEKGGRLPCPELCPDAVFR-LMEQCWAYEP 356
Query: 288 SKRPS 292
+RPS
Sbjct: 357 GQRPS 361
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 40/260 (15%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQ 114
VA+K + + +++ E K MS L H NI+N + + + V+ + G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 115 SIISSCFPDGLPEPCIAIVLKETLS-------------ALSYLHNQGHLHRDVKAGNILS 161
+ + +P AI TLS +++L ++ +HRDV A N+L
Sbjct: 139 NFLRRKSRVLETDPAFAIA-NSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197
Query: 162 DSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWS 221
+ K+ DFG++ I S++ G+A + WMAPE I Y+ ++D+WS
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-----WMAPESIFDCV-YTVQSDVWS 251
Query: 222 FGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK----- 276
+GI E+ L P +L+ S + K +KD + AF
Sbjct: 252 YGILLWEIFS-----LGLNPYPGILVN-------SKFYKL--VKDGYQMAQPAFAPKNIY 297
Query: 277 DMVASCLDQDPSKRPSAEKL 296
++ +C +P+ RP+ +++
Sbjct: 298 SIMQACWALEPTHRPTFQQI 317
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 80 MSLLSHPNILNAHCSFSV-------DSRLWVVMPFMSCGSLQSIISSCFPDGLPEP--CI 130
+++L HPNI+ F D L VVM ++ +L + + + P I
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILI 131
Query: 131 AIVLKETLSALSYLH--NQGHLHRDVKAGNIL-SDSDGSVKLADFGVSASIYEPSHHHHH 187
+ L + + ++ LH + HRD+K N+L +++DG++KL DFG SA PS +
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG-SAKKLSPSEPN-- 188
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRP 234
A I + Y+ APE+I + Y+ DIWS G E+ G P
Sbjct: 189 -VAYIC----SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 38/269 (14%)
Query: 60 AIDLDQSRTDLDSIRRETKTMS--LLSHPNIL----NAHCSFSVDSRLWVVMPFMSCGSL 113
A+ + SR D S RET+ + LL H NIL + S + ++LW++ + GSL
Sbjct: 35 AVKIFSSR-DEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSL 93
Query: 114 QSIISSCFPDGLPEPCIAIVLKETLS-ALSYLH-----NQGH---LHRDVKAGNILSDSD 164
+ EP +A+ L + + L++LH QG HRD K+ N+L S+
Sbjct: 94 YDFLQR----QTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSN 149
Query: 165 GSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEV----IRSHTGYSFK-ADI 219
+AD G++ + S + G+ GT +MAPEV IR+ S+K DI
Sbjct: 150 LQCCIADLGLAVMHSQGSDYLDIGN---NPRVGTKRYMAPEVLDEQIRTDCFESYKWTDI 206
Query: 220 WSFGITALELAHG----------RPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNK 269
W+FG+ E+A RPP + P M + T+ +
Sbjct: 207 WAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAAD 266
Query: 270 KFSRAFKDMVASCLDQDPSKRPSAEKLMK 298
M+ C +PS R +A ++ K
Sbjct: 267 PVLSGLAQMMRECWYPNPSARLTALRIKK 295
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 74 RRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCIAIV 133
+RE +T L P+++ H +D +L+V ++ L + + P L P +
Sbjct: 82 QREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGP--LAPPRAVAI 139
Query: 134 LKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMIT 193
+++ SAL H G HRDVK NIL +D L DFG++++ + +
Sbjct: 140 VRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD------EKLTQLG 193
Query: 194 DMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPP 235
+ GT Y+ APE S + +++ADI++ E G PP
Sbjct: 194 NTVGTLYYXAPERF-SESHATYRADIYALTCVLYECLTGSPP 234
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 130 IAIVLKETLSALSYLHNQGHLHRDVKAGNILSD-SDGSVKLADFGVSASIYEPSHHHHHG 188
I + E L AL Y H++G +HRDVK N++ D ++L D+G+ A Y P+ ++
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL-AEFYHPAQEYNVR 192
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
A + Y+ PE++ + Y + D+WS G + R P H
Sbjct: 193 VA-------SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFH 235
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 130 IAIVLKETLSALSYLHNQGHLHRDVKAGNILSD-SDGSVKLADFGVSASIYEPSHHHHHG 188
I + E L AL Y H++G +HRDVK N++ D ++L D+G+ A Y P+ ++
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL-AEFYHPAQEYNVR 197
Query: 189 SAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAHGRPPLSH 238
A + Y+ PE++ + Y + D+WS G + R P H
Sbjct: 198 VA-------SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFH 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQ 114
VA+K + + +++ E K MS L H NI+N + + + V+ + G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 115 SIISSCFPDGLPEPCIAIV------------LKETLSALSYLHNQGHLHRDVKAGNILSD 162
+ + +P AI + +++L ++ +HRDV A N+L
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 163 SDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSF 222
+ K+ DFG++ I S++ G+A + WMAPE I Y+ ++D+WS+
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-----WMAPESIFDCV-YTVQSDVWSY 252
Query: 223 GITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK-----D 277
GI E+ L P +L+ S + K +KD + AF
Sbjct: 253 GILLWEIFS-----LGLNPYPGILVN-------SKFYKL--VKDGYQMAQPAFAPKNIYS 298
Query: 278 MVASCLDQDPSKRPSAEKL 296
++ +C +P+ RP+ +++
Sbjct: 299 IMQACWALEPTHRPTFQQI 317
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 44/232 (18%)
Query: 29 YKILDEIGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNI 88
+K ++ IG G V+KA +D I+ + + + + RE K ++ L H NI
Sbjct: 14 FKEIELIGSGGFGQVFKAKH-RIDGKTYVIRRVKYNNEKAE-----REVKALAKLDHVNI 67
Query: 89 LNAH-C--SFSVD---------------------SR-----LWVVMPFMSCGSLQSIISS 119
++ + C F D SR L++ M F G+L+ I
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 120 CFPDGLPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIY 179
+ L + + ++ + Y+H++ +HRD+K NI VK+ DFG+ S+
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 180 EPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALELAH 231
T GT +M+PE I S Y + D+++ G+ EL H
Sbjct: 188 NDGKR--------TRSKGTLRYMSPEQISSQ-DYGKEVDLYALGLILAELLH 230
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 25/245 (10%)
Query: 52 DSTVVAIKAIDLDQSRTDLDS-IRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSC 110
D+T+VA+K+ + DL + +E + + SHPNI+ + +++VM +
Sbjct: 138 DNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 111 GSLQSIISSCFPDG--LPEPCIAIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVK 168
G + + + +G L + ++ + + + YL ++ +HRD+ A N L +K
Sbjct: 197 GDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253
Query: 169 LADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE 228
++DFG+S + G + W APE + ++ YS ++D+WSFGI E
Sbjct: 254 ISDFGMSREEADGVXAASGGLRQVPVK-----WTAPEAL-NYGRYSSESDVWSFGILLWE 307
Query: 229 -LAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDP 287
+ G P +L ++ T+ F EK ++ F+ ++ C +P
Sbjct: 308 TFSLGASPYPNLSNQQ------TREF----VEKGGRLPCPELCPDAVFR-LMEQCWAYEP 356
Query: 288 SKRPS 292
+RPS
Sbjct: 357 GQRPS 361
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQ 114
VA+K + + +++ E K MS L H NI+N + + + V+ + G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 115 SIISSCFP------DGLPEPCIAIVLKETL-------SALSYLHNQGHLHRDVKAGNILS 161
+ + DG P + L++ L +++L ++ +HRDV A N+L
Sbjct: 139 NFLRRKAEADLDKEDGRP-----LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193
Query: 162 DSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWS 221
+ K+ DFG++ I S++ G+A + WMAPE I Y+ ++D+WS
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-----WMAPESIFDCV-YTVQSDVWS 247
Query: 222 FGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK----- 276
+GI E+ L P +L+ S + K +KD + AF
Sbjct: 248 YGILLWEIFS-----LGLNPYPGILVN-------SKFYKL--VKDGYQMAQPAFAPKNIY 293
Query: 277 DMVASCLDQDPSKRPSAEKL 296
++ +C +P+ RP+ +++
Sbjct: 294 SIMQACWALEPTHRPTFQQI 313
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 56 VAIKAIDLDQSRTDLDSIRRETKTMSLLS-HPNILNAHCSFSVDSRLWVVMPFMSCGSLQ 114
VA+K + + +++ E K MS L H NI+N + + + V+ + G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 115 SIISSCFP------DGLPEPCIAIVLKETL-------SALSYLHNQGHLHRDVKAGNILS 161
+ + DG P + L++ L +++L ++ +HRDV A N+L
Sbjct: 131 NFLRRKAEADLDKEDGRP-----LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185
Query: 162 DSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWS 221
+ K+ DFG++ I S++ G+A + WMAPE I Y+ ++D+WS
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-----WMAPESIFDCV-YTVQSDVWS 239
Query: 222 FGITALELAHGRPPLSHLPPEKSLLMKMTQRFRFSDYEKTLKIKDKNKKFSRAFK----- 276
+GI E+ L P +L+ S + K +KD + AF
Sbjct: 240 YGILLWEIFS-----LGLNPYPGILVN-------SKFYKL--VKDGYQMAQPAFAPKNIY 285
Query: 277 DMVASCLDQDPSKRPSAEKL 296
++ +C +P+ RP+ +++
Sbjct: 286 SIMQACWALEPTHRPTFQQI 305
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
IG GV VYK + D VA+K +S ++ E +T+S HP++++
Sbjct: 47 IGHGVFGKVYKGVL--RDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP----------EPCIAIVLKETLSALSYL 144
+ + ++ +M G+L+ + LP E CI L YL
Sbjct: 104 CDERNEMILIYKYMENGNLKR---HLYGSDLPTMSMSWEQRLEICIG-----AARGLHYL 155
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
H + +HRDVK+ NIL D + K+ DFG+S E H + + GT ++ P
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTH-----LXXVVKGTLGYIDP 210
Query: 205 EVIRSHTGYSFKADIWSFGITALELAHGRPPLSH-LPPEKSLLMKM-TQRFRFSDYEKTL 262
E + K+D++SFG+ E+ R + LP E L + + E+ +
Sbjct: 211 EYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 263 --KIKDKNKKFS-RAFKDMVASCLDQDPSKRPS 292
+ DK + S R F D CL RPS
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 71 DSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCI 130
D + E M L +P I+ +S + +VM G L + + + I
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ--NRHVKDKNI 119
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH---H 187
++ + + YL +HRD+ A N+L + K++DFG+S ++ +++ H
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPPLSHLP-PEKSL 245
G + W APE I ++ +S K+D+WSFG+ E ++G+ P + E +
Sbjct: 180 GKWPVK-------WYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Query: 246 LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP---SAEKLMKHSFF 302
+++ +R R D++ C D RP + E +++ ++
Sbjct: 232 MLEKGERMGCP------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279
Query: 303 KNCNKG 308
N+G
Sbjct: 280 DVVNEG 285
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 35 IGVGVSAIVYKAICIPMDSTVVAIKAIDLDQSRTDLDSIRRETKTMSLLSHPNILNAHCS 94
IG GV VYK + D VA+K +S ++ E +T+S HP++++
Sbjct: 47 IGHGVFGKVYKGVL--RDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103
Query: 95 FSVDSRLWVVMPFMSCGSLQSIISSCFPDGLP----------EPCIAIVLKETLSALSYL 144
+ + ++ +M G+L+ + LP E CI L YL
Sbjct: 104 CDERNEMILIYKYMENGNLKR---HLYGSDLPTMSMSWEQRLEICIG-----AARGLHYL 155
Query: 145 HNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPYWMAP 204
H + +HRDVK+ NIL D + K+ DFG+S E H + + GT ++ P
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH-----LXXVVKGTLGYIDP 210
Query: 205 EVIRSHTGYSFKADIWSFGITALELAHGRPPLSH-LPPEKSLLMKM-TQRFRFSDYEKTL 262
E + K+D++SFG+ E+ R + LP E L + + E+ +
Sbjct: 211 EYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 263 --KIKDKNKKFS-RAFKDMVASCLDQDPSKRPS 292
+ DK + S R F D CL RPS
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 71 DSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCI 130
D + E M L +P I+ +S + +VM G L + + + I
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ--NRHVKDKNI 107
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH---H 187
++ + + YL +HRD+ A N+L + K++DFG+S ++ +++ H
Sbjct: 108 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPPLSHLP-PEKSL 245
G + W APE I ++ +S K+D+WSFG+ E ++G+ P + E +
Sbjct: 168 GKWPVK-------WYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
Query: 246 LMKMTQRFRFSDYEKTLKIKDKNKKFSRAFKDMVASCLDQDPSKRP---SAEKLMKHSFF 302
+++ +R R D++ C D RP + E +++ ++
Sbjct: 220 MLEKGERMGCP------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 267
Query: 303 KNCNKG 308
N+G
Sbjct: 268 DVVNEG 273
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 30 KILDEIGVGVSAIVYKAIC-IPMDSTV-VAIKAI--DLDQSRTDLDSIRRETKTMSLLSH 85
++L+++G G +V + P TV VA+K + D+ +D RE M L H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 86 PNILNAHCSFSVDSRLWVVMPFMSCGSLQSII---SSCFPDGLPEPCIAIVLKETLSALS 142
N++ + + + +V GSL + F G ++ + +
Sbjct: 81 RNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMG 135
Query: 143 YLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHHHGSAMITDMAGTPY-W 201
YL ++ +HRD+ A N+L + VK+ DFG+ ++ + H+ ++ + P+ W
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-----VMQEHRKVPFAW 190
Query: 202 MAPEVIRSHTGYSFKADIWSFGITALEL-AHGRPP 235
APE +++ T +S +D W FG+T E+ +G+ P
Sbjct: 191 CAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 71 DSIRRETKTMSLLSHPNILNAHCSFSVDSRLWVVMPFMSCGSLQSIISSCFPDGLPEPCI 130
D + E M L +P I+ +S + +VM G L + + + I
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ--NRHVKDKNI 129
Query: 131 AIVLKETLSALSYLHNQGHLHRDVKAGNILSDSDGSVKLADFGVSASIYEPSHHHH---H 187
++ + + YL +HRD+ A N+L + K++DFG+S ++ +++ H
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 188 GSAMITDMAGTPYWMAPEVIRSHTGYSFKADIWSFGITALE-LAHGRPP 235
G + W APE I ++ +S K+D+WSFG+ E ++G+ P
Sbjct: 190 GKWPVK-------WYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,044,324
Number of Sequences: 62578
Number of extensions: 627477
Number of successful extensions: 16161
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 12694
Number of HSP's gapped (non-prelim): 1542
length of query: 506
length of database: 14,973,337
effective HSP length: 103
effective length of query: 403
effective length of database: 8,527,803
effective search space: 3436704609
effective search space used: 3436704609
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)