BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010625
(506 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 190/424 (44%), Gaps = 29/424 (6%)
Query: 50 PHISIH--SLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLT 107
P++ IH SL++K GP+ L+ G E + + F+ RPQ+ + K ++
Sbjct: 43 PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVS 102
Query: 108 YDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQL 167
+ YS W+ +K+ LL R E + + F M PV +
Sbjct: 103 QRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCERMRVQAGAPVTI 161
Query: 168 KDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLV--HGTLDIGDAIPWL 225
+ +L S + + G + E+ +V F + +++L H ++ I D +P+L
Sbjct: 162 QKEFSLLTCSIICYLTFGNK-----EDTLV--HAFHDCVQDLMKTWDHWSIQILDMVPFL 214
Query: 226 APLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEV 285
G + R+K D E+ L +G+ DM D ++Q +E
Sbjct: 215 RFFPNPG-LWRLKQAIENRDHMVEKQLRRHKESMVAGQ---WRDMTDYMLQGVGRQRVEE 270
Query: 286 K----IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRD-- 339
+E H +++ DL GT+T+A + WA++ LL +PE ++ EELDR +G
Sbjct: 271 GPGQLLEGHVHMSVV-DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGAS 329
Query: 340 -RWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWT 398
V KD LP + A + E +RL PVVPL +P + GYD+ + V+ N+
Sbjct: 330 CSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQG 389
Query: 399 IGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANL 458
D T+WE+P+EF PDRF+ G + L FG G R+CLG L + LA L
Sbjct: 390 AHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGARVCLGESLARLELFVVLARL 444
Query: 459 LHGF 462
L F
Sbjct: 445 LQAF 448
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 197/454 (43%), Gaps = 26/454 (5%)
Query: 46 IGPLPHISIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKY 105
+G PH+++ +S++YG ++ ++ G L F RP L
Sbjct: 28 LGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTL 87
Query: 106 LTYDYTGMGTAPYSPYWRQARKICVMELLS------PKRLDQ--FEYMRVEERKLFLHDM 157
++ + + P W R++ L S P E +E ++ + +
Sbjct: 88 ISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTL 147
Query: 158 FKSCSKPVQLKDRLYMLNLST--MSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGT 215
+ + P Y++ T + + G+RY + + E V G+
Sbjct: 148 QELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGE----VVGS 203
Query: 216 LDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLV 275
+ D IP L L + KD+N K F ++++ E Y + G + D+ D L+
Sbjct: 204 GNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGH---IRDITDSLI 259
Query: 276 QFADDPTLE----VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEE 331
+ + L+ V++ ++ I+ DL AG DT + W++ L+ NP +K EE
Sbjct: 260 EHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEE 319
Query: 332 LDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSR 391
LD VIGR R + D +LPY++A + ET R VP IP D + G+ + K
Sbjct: 320 LDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRC 379
Query: 392 VLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDV-KGHDYELLPFGSGRRMCLGYGLGLKL 450
V +N W I D +W P+EF P+RF+ + + K +++ FG G+R C+G +
Sbjct: 380 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 439
Query: 451 VQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLT 484
V LA LL E+ +P +K +DM +GLT
Sbjct: 440 VFLFLAILLQRVEFSVPLGVK---VDMTPIYGLT 470
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 204/456 (44%), Gaps = 48/456 (10%)
Query: 43 LNLIGPLP--------HISIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSF 94
L L+G LP H + L +KYGP+ ++ G A+ +L F
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 95 SSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQ-FEYMRVEERKLF 153
S RPQ+ + + G+ A +W+ R++ + K DQ E + +E
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTL 135
Query: 154 LHDMFKSCSKPVQLKDRLYMLNLSTMSRMVLGKRYTEED-ENNIVTPKEFTEMLEELFLV 212
+ + + + +++ + +S + Y D E N++ + + E + +
Sbjct: 136 CDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVI--QNYNEGIIDNLSK 193
Query: 213 HGTLDIGDAIPWLAPL------DLQGHVKRMKDV-NRKLDRFYEQILDERYARKKSGKDQ 265
+D+ +PWL L+ HVK D+ N+ L+ + E+ +
Sbjct: 194 DSLVDL---VPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-----------RSD 239
Query: 266 GVNDMVDVLVQF---------ADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMS 316
+ +M+D L+Q D E+ + H L I D+ AG +T+ V+W ++
Sbjct: 240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHIL-TTIGDIFGAGVETTTSVVKWTLA 298
Query: 317 LLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAR 376
LL NP+ +K EE+D+ +G R D L ++A ++E +RL PV P+LIP A
Sbjct: 299 FLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKAN 358
Query: 377 EDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI---GKEIDVKGHDYELLP 433
D + + + K + V+IN+W + + W +P++F P+RF+ G ++ Y LP
Sbjct: 359 VDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSY--LP 416
Query: 434 FGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGD 469
FG+G R C+G L + + +A LL F+ ++P D
Sbjct: 417 FGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 452
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 182/418 (43%), Gaps = 31/418 (7%)
Query: 46 IGPLPHISIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKY 105
+G H+S L+R+YG + ++ G L +F+ RP + +
Sbjct: 26 VGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRV 85
Query: 106 LTYDYTGMGTAPYSPYWRQARKICVMELLS-----PKRLDQFEYMRVEERKLFLHDMFKS 160
++ + M YS +W+ R+ + + P+ E + E + + + +
Sbjct: 86 VSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRG 144
Query: 161 CSKPVQLKDR-LYMLNLST-MSRMVLGKRYTEEDENNIVTPKEFTEML---EELFLVHGT 215
+ L R L ++ ++ MS + G RY+ +D EF E+L EE G
Sbjct: 145 SADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDD-------PEFRELLSHNEEFGRTVGA 197
Query: 216 LDIGDAIPWLA--PLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGV-NDMVD 272
+ D +PWL P ++ + + +NR F ILD+ +S + DM+D
Sbjct: 198 GSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNF---ILDKFLRHCESLRPGAAPRDMMD 254
Query: 273 VLVQFA------DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQ 326
+ A D +++ + A I D+ A DT + ++W + L + P+
Sbjct: 255 AFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQT 314
Query: 327 KATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDL 386
+ ELD+V+GRDR D NLPY+ A + E MR VP+ IP + V GY +
Sbjct: 315 RVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHI 374
Query: 387 LKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKE-IDVKGHDYELLPFGSGRRMCLG 443
K++ V +N W++ DP W P F P RF+ K+ + K ++ F G+R C+G
Sbjct: 375 PKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIG 432
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 194/454 (42%), Gaps = 27/454 (5%)
Query: 46 IGPLPHISIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKY 105
+G PH+++ +S++YG ++ ++ G L F RP L
Sbjct: 33 LGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTL 92
Query: 106 LTYDYTGMGTAPYSPYWRQARKIC-----VMELLSPKRLDQFEYMR---VEERKLFLHDM 157
+T + + P W R++ + S Y+ +E K + +
Sbjct: 93 ITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRL 152
Query: 158 FKSCSKPVQLK--DRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGT 215
+ + P +++ + + + M G+ + E + + K E +E
Sbjct: 153 QELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETA-SSGNP 211
Query: 216 LDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLV 275
LD + +L LQ R K N++ F ++ + E Y + V D+ L
Sbjct: 212 LDFFPILRYLPNPALQ----RFKAFNQRFLWFLQKTVQEHY---QDFDKNSVRDITGALF 264
Query: 276 QFAD-DPTLEVK-IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELD 333
+ + P I + ++ ++ D+ AG DT + W++ L+ PE +K +ELD
Sbjct: 265 KHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELD 324
Query: 334 RVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVL 393
VIGR+R + D LPY++A + ET R +P IP D + G+ + K V
Sbjct: 325 TVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVF 384
Query: 394 INIWTIGRDPTIWEKPNEFWPDRFI---GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKL 450
+N W + DP +WE P+EF P+RF+ G I+ K +++ FG G+R C+G L
Sbjct: 385 VNQWQVNHDPELWEDPSEFRPERFLTADGTAIN-KPLSEKMMLFGMGKRRCIGEVLAKWE 443
Query: 451 VQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLT 484
+ LA LL E+ +P +K +D+ +GLT
Sbjct: 444 IFLFLAILLQQLEFSVPPGVK---VDLTPIYGLT 474
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 190/459 (41%), Gaps = 18/459 (3%)
Query: 49 LPHISIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTY 108
LPH+ + S+ YG + L G + L F+ RP L +T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT- 93
Query: 109 DYTGMGTAPYSPYWRQARKICVMEL-LSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQL 167
G+ + Y W R++ V FE +EE K F + +P
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 168 KDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAP 227
K + + + ++ G+R+T ED + + F+E +E ++ + +A PW+
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVE--LAASASVFLYNAFPWIGI 211
Query: 228 LDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKI 287
L H + ++ D I RK V+ +D + Q +DP+
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPS--STF 269
Query: 288 ERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDI 347
+ L + +L+ AGT+T+ + WA+ + P + +E+D ++G + D
Sbjct: 270 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDK 329
Query: 348 VNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWE 407
+PY +A++ E +R +VPL I ED V GY + K + V+ N++++ D W
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 408 KPNEFWPDRFIGKEIDVKGH---DYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
P F P+RF +D G+ L+PF GRR CLG L + LL F
Sbjct: 390 DPEVFHPERF----LDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHL 445
Query: 465 KLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRLPHH 503
P ++ D++ R G+ T + P ++ + R HH
Sbjct: 446 HFPHELVP---DLKPRLGM-TLQPQPYLICAER-RHHHH 479
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 182/440 (41%), Gaps = 16/440 (3%)
Query: 49 LPHISIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTY 108
LPH+ + S+ YG + L G + L F+ RP L +T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT- 93
Query: 109 DYTGMGTAPYSPYWRQARKICVMEL-LSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQL 167
G+ + Y W R++ V FE +EE K F + +P
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 168 KDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAP 227
K + + + ++ G+R+T ED + + F+E +E ++ + +A PW+
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVE--LAASASVFLYNAFPWIGI 211
Query: 228 LDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKI 287
L H + ++ D I RK V+ +D + Q +DP+
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPS--STF 269
Query: 288 ERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDI 347
+ L + +L+ AGT+T+ + WA+ + P + +E+D ++G + D
Sbjct: 270 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDK 329
Query: 348 VNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWE 407
+PY +A++ E +R +VPL I ED V GY + K + V+ N++++ D W
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 408 KPNEFWPDRFIGKEIDVKGH---DYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
P F P+RF +D G+ L+PF GRR CLG L + LL F
Sbjct: 390 DPEVFHPERF----LDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHL 445
Query: 465 KLPGDMKRQDLDMEERFGLT 484
P ++ D++ R G+T
Sbjct: 446 HFPHELVP---DLKPRLGMT 462
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 188/431 (43%), Gaps = 32/431 (7%)
Query: 57 LSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTGMGT- 115
L R++G + L+ + L TH + RP + + L + G
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 116 -APYSPYWRQARKICVMEL----LSPKRLDQFEYMRVEERKLFLHDMFKSCS-KPVQLKD 169
A Y P WR+ R+ V L L K L+Q+ V E L F + S +P +
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQW----VTEEAACLCAAFANHSGRPFRPNG 154
Query: 170 RLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTL-DIGDAIPWLAPL 228
L + ++ + G+R+ +D + E L+E G L ++ +A+P L
Sbjct: 155 LLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKE---ESGFLREVLNAVPVLL-- 209
Query: 229 DLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKD--QGVNDMVDVLVQFADDP--TLE 284
H+ + + + + LDE + D Q D+ + + + E
Sbjct: 210 ----HIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPE 265
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
L+ ++ DL +AG T++ + W + L++ +P+ ++ +E+D VIG+ R +
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
D ++PY A++ E R +VPL + + D +V G+ + K + ++ N+ ++ +D
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYE---LLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
+WEKP F P+ F +D +GH + LPF +GRR CLG L + +LL
Sbjct: 386 VWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQH 441
Query: 462 FEWKLPGDMKR 472
F + +P R
Sbjct: 442 FSFSVPTGQPR 452
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 188/431 (43%), Gaps = 32/431 (7%)
Query: 57 LSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTGMGT- 115
L R++G + L+ + L TH + RP + + L + G
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 116 -APYSPYWRQARKICVMEL----LSPKRLDQFEYMRVEERKLFLHDMFKSCS-KPVQLKD 169
A Y P WR+ R+ V L L K L+Q+ V E L F + S +P +
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQW----VTEEAACLCAAFANHSGRPFRPNG 154
Query: 170 RLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTL-DIGDAIPWLAPL 228
L + ++ + G+R+ +D + E L+E G L ++ +A+P
Sbjct: 155 LLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKE---ESGFLREVLNAVP----- 206
Query: 229 DLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKD--QGVNDMVDVLVQFADDP--TLE 284
+ H+ + + + + LDE + D Q D+ + + + E
Sbjct: 207 -VDRHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPE 265
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
L+ ++ DL +AG T++ + W + L++ +P+ ++ +E+D VIG+ R +
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
D ++PY A++ E R +VPL + + D +V G+ + K + ++ N+ ++ +D
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYE---LLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
+WEKP F P+ F +D +GH + LPF +GRR CLG L + +LL
Sbjct: 386 VWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQH 441
Query: 462 FEWKLPGDMKR 472
F + +P R
Sbjct: 442 FSFSVPTGQPR 452
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 184/432 (42%), Gaps = 30/432 (6%)
Query: 53 SIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTG 112
S + S+ YGP+ + FG + + L + FS R + +T G
Sbjct: 35 SFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRIT---KG 91
Query: 113 MGT-APYSPYWRQARKICVMELLSPKRLDQFEYMRV-EERKLFLHDMFKSCSKPVQLKDR 170
+G + W++ R+ + L + + RV EE + ++ K+ + P
Sbjct: 92 LGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFI 151
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
L + + +V KR+ +D+N + K F E L + + + P L
Sbjct: 152 LGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENFR--ILNSPWIQVCNNFPLLIDCFP 209
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQG---VN---DMVDVLV----QFADD 280
H K +K+V L Y R+K + Q VN D +D + Q D+
Sbjct: 210 GTHNKVLKNV----------ALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDN 259
Query: 281 PTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDR 340
E IE L + DL AGT+T++ + + + LLLK+PE K EE+D VIGR R
Sbjct: 260 QKSEFNIE--NLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHR 317
Query: 341 WVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIG 400
+D ++PY A+V E R +VP +P D K Y + K + ++ + ++
Sbjct: 318 SPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVL 377
Query: 401 RDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLH 460
D + PN F P F+ K + K DY +PF +G+R+C G GL + L +L
Sbjct: 378 HDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQ 436
Query: 461 GFEWKLPGDMKR 472
F K D+K
Sbjct: 437 NFNLKSVDDLKN 448
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 179/394 (45%), Gaps = 35/394 (8%)
Query: 112 GMGTA-PYSPYWRQARKICVMELLS---PKRLDQFEYMRVEERKLFLHDMFKSCSKPVQL 167
G+G A + W++ R+ +M L + KR E EE + + ++ K+ + P
Sbjct: 91 GLGIAFSNAKTWKEMRRFSLMTLRNFGMGKR--SIEDRIQEEARCLVEELRKTNASPCDP 148
Query: 168 KDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLA- 226
L + + ++ R+ +DE EF +++E L H +++ PWL
Sbjct: 149 TFILGCAPCNVICSVIFHNRFDYKDE-------EFLKLMESL---HENVELL-GTPWLQV 197
Query: 227 ----PLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDV-LVQFADDP 281
P L K + + D I+++ +K D +D L++ +
Sbjct: 198 YNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQEN 257
Query: 282 TLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRW 341
LE +E L + DL AGT+T++ + +++ LLLK+PE + EE++RVIGR R
Sbjct: 258 NLEFTLE--SLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRS 315
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
+D +PY A++ E R ++P +P D + Y + K + ++ ++ ++
Sbjct: 316 PCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLH 375
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
D + P F P F+ + + K DY +PF +G+RMC+G GL + L ++L
Sbjct: 376 DEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQN 434
Query: 462 FEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVP 495
F KL ++ +DLD+ T N V VP
Sbjct: 435 F--KLQSLVEPKDLDI-------TAVVNGFVSVP 459
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Query: 298 DLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIV 357
+L AGT+T + + + LL+K+PE K EE+DRVIG++R + +D +PY++A++
Sbjct: 275 NLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 358 KETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRF 417
E R V+P+ + R ++D K + L K + V + ++ RDP+ + P +F P F
Sbjct: 335 HEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 418 IGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDM 477
+ ++ K D +PF G+R C G GL + ++ F +L +D+D+
Sbjct: 395 LNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDV 451
Query: 478 EER-FGLTTCKKNPLVVVPTKPRLPHH 503
+ G T +N + PR HH
Sbjct: 452 SPKHVGFATIPRN--YTMSFLPRHHHH 476
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 6/207 (2%)
Query: 298 DLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIV 357
+L GT+T + + + LL+K+PE K EE+DRVIG++R + +D +PY++A++
Sbjct: 275 NLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 358 KETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRF 417
E R V+P+ + R ++D K + L K + V + ++ RDP+ + P +F P F
Sbjct: 335 HEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 418 IGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDM 477
+ ++ K D +PF G+R C G GL + ++ F +L +D+D+
Sbjct: 395 LNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDV 451
Query: 478 EER-FGLTTCKKNPLVVVPTKPRLPHH 503
+ G T +N + PR HH
Sbjct: 452 SPKHVGFATIPRN--YTMSFLPRHHHH 476
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 6/207 (2%)
Query: 298 DLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIV 357
+L AGT+T + + + LL+K+PE K EE+DRVIG++R + +D +PY +A++
Sbjct: 275 NLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVI 334
Query: 358 KETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRF 417
E R ++P+ + +D K + L K + V + ++ RDP + P +F P F
Sbjct: 335 HEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF 394
Query: 418 IGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDM 477
+ K+ K D +PF G+R C G GL + ++ F +K P K D+D+
Sbjct: 395 LDKKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPK--DIDV 451
Query: 478 EER-FGLTTCKKNPLVVVPTKPRLPHH 503
+ G T +N + PR HH
Sbjct: 452 SPKHVGFATIPRN--YTMSFLPRHHHH 476
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
L GT+T + + + LL+K+PE K EE+DRVIG++R + +D +PY++A++
Sbjct: 276 LFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E R V+P+ + R ++D K + L K + V + ++ RDP+ + P +F P F+
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDME 478
++ K D +PF G+R C G GL + ++ F +L +D+D+
Sbjct: 396 NEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVS 452
Query: 479 ER-FGLTTCKKNPLVVVPTKPRLPHH 503
+ G T +N + PR HH
Sbjct: 453 PKHVGFATIPRN--YTMSFLPRHHHH 476
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
L GT+T + + + LL+K+PE K EE+DRVIG++R + +D +PY++A++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E R V+P+ + R ++D K + L K + V + ++ RDP+ + P +F P F+
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDME 478
++ K D +PF G+R C G GL + ++ F +L +D+D+
Sbjct: 396 NEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVS 452
Query: 479 ER-FGLTTCKKNPLVVVPTKPRLPHH 503
+ G T +N + PR HH
Sbjct: 453 PKHVGFATIPRN--YTMSFLPRHHHH 476
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
L GT+T + + + LL+K+PE K EE+DRVIG++R + +D +PY++A++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E R V+P+ + R ++D K + L K + V + ++ RDP+ + P +F P F+
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDME 478
++ K D +PF G+R C G GL + ++ F +L +D+D+
Sbjct: 396 NEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF--RLKSSQSPKDIDVS 452
Query: 479 ER-FGLTTCKKNPLVVVPTKPRLPHH 503
+ G T +N + PR HH
Sbjct: 453 PKHVGFATIPRN--YTMSFLPRHHHH 476
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 189/433 (43%), Gaps = 26/433 (6%)
Query: 53 SIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTG 112
S+ +LS+ YGP+ L FG + + L FS R + G
Sbjct: 36 SLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERAN---RG 92
Query: 113 MGTA-PYSPYWRQARKICVMELLSPKRLDQFEYMRV-EERKLFLHDMFKSCSKPVQLKDR 170
G W++ R+ +M L + + RV EE + + ++ K+ + P
Sbjct: 93 FGIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI 152
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGT--LDIGDAIPWLAPL 228
L + + ++ KR+ +D+ + E L E + T + I + P +
Sbjct: 153 LGCAPCNVICSIIFQKRFDYKDQQFL----NLMEKLNENIRIVSTPWIQICNNFPTIIDY 208
Query: 229 DLQGHVKRMKDVNRKLDRFYEQ-ILDERYARKKSGKDQGVNDMVDVLV----QFADDPTL 283
H K +K++ F E IL++ ++S D +D + + +
Sbjct: 209 FPGTHNKLLKNL-----AFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQS 263
Query: 284 EVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQ 343
E IE + A DLL AGT+T++ + +A+ LLLK+PE K EE++RV+GR+R
Sbjct: 264 EFTIENLVITA--ADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPC 321
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
+D ++PY A+V E R ++P +P D K Y + K + +L ++ ++ D
Sbjct: 322 MQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDN 381
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ P F P F+ + + K +Y +PF +G+R+C+G GL + L +L F
Sbjct: 382 KEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFN 440
Query: 464 WKLPGDMKRQDLD 476
K D K DLD
Sbjct: 441 LKSLIDPK--DLD 451
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 187/430 (43%), Gaps = 22/430 (5%)
Query: 53 SIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTG 112
S+ +LS+ YGP+ L FG + L FS R + G
Sbjct: 34 SLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN---RG 90
Query: 113 MGTA-PYSPYWRQARKICVMELLSPKRLDQFEYMRV-EERKLFLHDMFKSCSKPVQLKDR 170
G W++ R+ +M L + + RV EE + + ++ K+ + P
Sbjct: 91 FGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI 150
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
L + + ++ KR+ +D+ + ++ E +E L + + + P L
Sbjct: 151 LGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIE--ILSSPWIQVYNNFPALLDYFP 208
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKD-QGVNDMVDVLV-----QFADDPTLE 284
H K +K+V F + + E+ + D D +D + + + P+ E
Sbjct: 209 GTHNKLLKNV-----AFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS-E 262
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
IE + A+ DL AGT+T++ + +A+ LLLK+PE K EE++RVIGR+R
Sbjct: 263 FTIESLENTAV--DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCM 320
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
+D ++PY A+V E R ++P +P D K Y + K + +LI++ ++ D
Sbjct: 321 QDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNK 380
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
+ P F P F+ + + K Y +PF +G+R+C+G L + L ++L F
Sbjct: 381 EFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNL 439
Query: 465 KLPGDMKRQD 474
K D K D
Sbjct: 440 KSLVDPKNLD 449
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 188/437 (43%), Gaps = 36/437 (8%)
Query: 53 SIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTG 112
S+ +LS+ YGP+ L FG + L FS R G + +
Sbjct: 36 SLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGR-----GIFPLAERAN 90
Query: 113 MGTA---PYSPYWRQARKICVMELLSPKRLDQFEYMRV-EERKLFLHDMFKSCSKPVQLK 168
G W++ R+ +M L + + RV EE + + ++ K+ + P
Sbjct: 91 RGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPT 150
Query: 169 DRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEEL-----FLVHGTLDIGDAIP 223
L + + ++ KR+ +D+ +F ++E+L L + I +
Sbjct: 151 FILGCAPCNVICSIIFHKRFDYKDQ-------QFLNLMEKLNENIKILSSPWIQICNNFS 203
Query: 224 WLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKD-QGVNDMVDVLV-----QF 277
+ H K +K+V F + + E+ + D D +D + +
Sbjct: 204 PIIDYFPGTHNKLLKNV-----AFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEK 258
Query: 278 ADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIG 337
+ P+ E IE + A+ DL AGT+T++ + +A+ LLLK+PE K EE++RVIG
Sbjct: 259 HNQPS-EFTIESLENTAV--DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG 315
Query: 338 RDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIW 397
R+R +D ++PY A+V E R ++P +P D K Y + K + +LI++
Sbjct: 316 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLT 375
Query: 398 TIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLAN 457
++ D + P F P F+ + + K Y +PF +G+R+C+G L + L +
Sbjct: 376 SVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTS 434
Query: 458 LLHGFEWKLPGDMKRQD 474
+L F K D K D
Sbjct: 435 ILQNFNLKSLVDPKNLD 451
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 145/336 (43%), Gaps = 20/336 (5%)
Query: 174 LNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGH 233
+ + + +V GKR+ +D+ EF +ML L + T + ++ G
Sbjct: 155 ITANIICSIVFGKRFHYQDQ-------EFLKMLN---LFYQTFSLISSVFGQLFELFSGF 204
Query: 234 VKRMKDVNRKLDRFYEQI---LDERYARKKSGKDQGV-NDMVD--VLVQFADDPTLEVKI 287
+K +R++ + ++I + + + D D++D +L + +
Sbjct: 205 LKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEF 264
Query: 288 ERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDI 347
L L AGT+T++ + + L+LK P ++ E+++VIG R + D
Sbjct: 265 SHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDR 324
Query: 348 VNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWE 407
+PY +A++ E R ++P+ +P + + GY + K++ V + + T DP +E
Sbjct: 325 AKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFE 384
Query: 408 KPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLP 467
KP+ F PD F+ +K + +PF G+R+CLG G+ + +L F P
Sbjct: 385 KPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP 443
Query: 468 GDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRLPHH 503
+ DL +E K P + PR HH
Sbjct: 444 VAPEDIDLTPQE---CGVGKIPPTYQIRFLPRHHHH 476
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 230 LQGHVKRMKDVNRKLDRFYEQI---LDERYARKKSGKD-QGVNDMVDVLV----QFADDP 281
G +K +R++ R ++I + + + ++ D D +DV + + DP
Sbjct: 201 FSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 282 TLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRW 341
+ E L + L AGT+T++ + + L+LK P ++ +E+++VIG R
Sbjct: 261 SSE--FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP 318
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
D +PY A++ E RL ++P +P +D + GY + KN+ V + +
Sbjct: 319 PALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH 378
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
DP +E PN F P F+ +K ++ +PF G+R+CLG G+ + +L
Sbjct: 379 DPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQN 437
Query: 462 FEWKLPGDMKRQDLDMEER 480
F P + +D+D+ R
Sbjct: 438 FSIASP--VPPEDIDLTPR 454
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 279 DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGR 338
DP+ E L + L AGT+T++ + + L+LK P ++ +E+++VIG
Sbjct: 258 SDPSSE--FHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS 315
Query: 339 DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWT 398
R D +PY A++ E RL ++P +P +D + GY + KN+ V + +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 399 IGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANL 458
DP +E PN F P F+ +K ++ +PF G+R+CLG G+ + +
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 459 LHGFEWKLPGDMKRQDLDMEER 480
L F P + +D+D+ R
Sbjct: 435 LQNFSIASP--VPPEDIDLTPR 454
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 279 DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGR 338
DP+ E L + L AGT+T++ + + L+LK P ++ +E+++VIG
Sbjct: 258 SDPSSE--FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS 315
Query: 339 DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWT 398
R D +PY A++ E RL ++P +P +D + GY + KN+ V + +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 399 IGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANL 458
DP +E PN F P F+ +K ++ +PF G+R+CLG G+ + +
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 459 LHGFEWKLPGDMKRQDLDMEER 480
L F P + +D+D+ R
Sbjct: 435 LQNFSIASP--VPPEDIDLTPR 454
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 187/463 (40%), Gaps = 34/463 (7%)
Query: 53 SIHSLSRKYGPLMHLKFGFDXXXXXXXXXXAELLLKTHDLSFSSRPQLLAGKYLTYDYTG 112
S L++++GP+ L G + L + FS R L A + + G
Sbjct: 35 SFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA--FHAHRDRG 92
Query: 113 MGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVE-ERKLFLHDMFKSCSKPVQLKDRL 171
+ P W+ R+ + L + Q R++ E L + K+ +P +
Sbjct: 93 I-IFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLI 151
Query: 172 YMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQ 231
+ ++ ++ K + DE + F E L L + + P
Sbjct: 152 GCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFH--LLSTPWLQLYNNFPSFLHYLPG 209
Query: 232 GHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGV-NDMVDVLVQFADDPTLEVKIERH 290
H K +K+V ++ + ER D D+ D L+ +E++ E+H
Sbjct: 210 SHRKVIKNVAE-----VKEYVSERVKEHHQSLDPNCPRDLTDCLL-------VEMEKEKH 257
Query: 291 Q---------LKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRW 341
+ + DL AGT+T++ + + + +L+K PE +K EE+DRVIG R
Sbjct: 258 SAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRI 317
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
KD +PY+ A+V E R +VP +P A D GY + K + V+ + ++
Sbjct: 318 PAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLY 377
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
D + P +F P+ F+ + K DY PF +G+R+C G GL + L +L
Sbjct: 378 DNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQH 436
Query: 462 FEWKLPGDMKRQDLD-MEERFGLTTCKKNPLVVVPTKPRLPHH 503
F K D K DL + FG + V+ PR HH
Sbjct: 437 FNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVI----PRSHHH 475
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 279 DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGR 338
DP+ E L + L AGT+T++ + + L+LK P ++ +E+++VIG
Sbjct: 258 SDPSSE--FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS 315
Query: 339 DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWT 398
R D +PY A++ E RL ++P +P +D + GY + KN+ V + +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 399 IGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANL 458
DP +E PN F P F+ +K ++ +PF G+R+CLG G+ + +
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 459 LHGFEWKLPGDMKRQDLDMEER 480
L F P + +D+D+ R
Sbjct: 435 LQNFSIASP--VPPEDIDLTPR 454
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 279 DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGR 338
DP+ E L + L AGT+T++ + + L+LK P ++ +E+++VIG
Sbjct: 258 SDPSSE--FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS 315
Query: 339 DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWT 398
R D +PY A++ E RL ++P +P +D + GY + KN+ V + +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 399 IGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANL 458
DP +E PN F P F+ +K ++ +PF G+R+C G G+ + +
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICAGEGIARTELFLFFTTI 434
Query: 459 LHGFEWKLPGDMKRQDLDMEER 480
L F P + +D+D+ R
Sbjct: 435 LQNFSIASP--VPPEDIDLTPR 454
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 165 VQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPW 224
+ L D L + T S ++GK++ ++ + F ++ EL GT + P+
Sbjct: 134 IDLLDFFAELTIYTSSACLIGKKFRDQLDGR------FAKLYHEL--ERGTDPLAYVDPY 185
Query: 225 LAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLE 284
L P++ +R + L I++ R A + D+ DM+DVL+ + T
Sbjct: 186 L-PIE---SFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAE-TGT 238
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
+ ++ + ++ AG TS+ W + L+++ +A +ELD + G R V
Sbjct: 239 PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF 298
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
+ +P ++ ++KET+RLHP + +L+ RVA+ + +V G+ + + V + R P
Sbjct: 299 HALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
+ P++F P R+ + + + +PFG+GR C+G + +++ + LL +E+
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 465 KL--PGDMKRQD 474
++ P + R D
Sbjct: 418 EMAQPPESYRND 429
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 165 VQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPW 224
+ L D L + T S ++GK++ ++ + F ++ EL GT + P+
Sbjct: 134 IDLLDFFAELTIYTSSACLIGKKFRDQLDGR------FAKLYHEL--ERGTDPLAYVDPY 185
Query: 225 LAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLE 284
L P++ +R + L I++ R A + D+ DM+DVL+ + T
Sbjct: 186 L-PIE---SFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAE-TGT 238
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
+ ++ + ++ AG TS+ W + L+++ +A +ELD + G R V
Sbjct: 239 PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF 298
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
+ +P ++ ++KET+RLHP + +L+ RVA+ + +V G+ + + V + R P
Sbjct: 299 HALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
+ P++F P R+ + + + +PFG+GR C+G + +++ + LL +E+
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 465 KL--PGDMKRQD 474
++ P + R D
Sbjct: 418 EMAQPPESYRND 429
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 165 VQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPW 224
+ L D L + T S ++GK++ ++ + F ++ EL GT + P+
Sbjct: 134 IDLLDFFAELTIYTSSATLIGKKFRDQLDGR------FAKLYHEL--ERGTDPLAYVDPY 185
Query: 225 LAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLE 284
L P++ +R + L I++ R A + D+ DM+DVL+ + T
Sbjct: 186 L-PIE---SFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAE-TGT 238
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
+ ++ + ++ AG TS+ W + L+++ +A +ELD + G R V
Sbjct: 239 PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF 298
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
+ +P ++ ++KET+RLHP + +L+ RVA+ + +V G+ + + V + R P
Sbjct: 299 HALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
+ P++F P R+ + + + +PFG+GR C+G + +++ + LL +E+
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 465 KL--PGDMKRQD 474
++ P + R D
Sbjct: 418 EMAQPPESYRND 429
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 165 VQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPW 224
+ L D L + T S ++GK++ ++ + F ++ EL GT + P+
Sbjct: 134 IDLLDFFAELTIYTSSACLIGKKFRDQLDGR------FAKLYHEL--ERGTDPLAYVDPY 185
Query: 225 LAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLE 284
L P++ +R + L I++ R A + D+ DM+DVL+ + T
Sbjct: 186 L-PIE---SFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAE-TGT 238
Query: 285 VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQE 344
+ ++ + ++ AG TS+ W + L+++ +A +ELD + G R V
Sbjct: 239 PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF 298
Query: 345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPT 404
+ +P ++ ++KET+RLHP + +L+ RVA+ + +V G+ + + V + R P
Sbjct: 299 HALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 405 IWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEW 464
+ P++F P R+ + + + +PFG+GR C+G + +++ + LL +E+
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 465 KL--PGDMKRQD 474
++ P + R D
Sbjct: 418 EMAQPPESYRND 429
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
+ AG +T++ + + M L +P+ QK EE+D V+ ++ + Y+ +V
Sbjct: 282 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 341
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
ET+RL P+ + + RV ++D ++ G + K V+I + + RDP W +P +F P+RF
Sbjct: 342 ETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 400
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWK 465
K D Y PFGSG R C+G L ++ +L +L F +K
Sbjct: 401 KKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
+ AG +T++ + + M L +P+ QK EE+D V+ ++ + Y+ +V
Sbjct: 281 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 340
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
ET+RL P+ + + RV ++D ++ G + K V+I + + RDP W +P +F P+RF
Sbjct: 341 ETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 399
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWK 465
K D Y PFGSG R C+G L ++ +L +L F +K
Sbjct: 400 KKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
+ AG +T++ + + M L +P+ QK EE+D V+ ++ + Y+ +V
Sbjct: 280 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 339
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
ET+RL P+ + + RV ++D ++ G + K V+I + + RDP W +P +F P+RF
Sbjct: 340 ETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 398
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWK 465
K D Y PFGSG R C+G L ++ +L +L F +K
Sbjct: 399 KKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 218 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 275
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P VP
Sbjct: 276 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAF 334
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 335 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 392
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 393 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 447
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 448 VVKAKSKKIPLGGIPS 463
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 20/260 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q + + +L DP ++ ++ I L AG +T++
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHML--HGKDPETGEPLDDENIRYQIITFLIAGHETTSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +R+ P P
Sbjct: 274 LTFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD T+W + EF P+RF + H
Sbjct: 333 -SLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD+EE L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIEETLTLKPKGF 445
Query: 484 ---TTCKKNPLVVVPTKPRL 500
KK PL +P+ L
Sbjct: 446 VIKAKSKKIPLGGIPSPSTL 465
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 445
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 446 VVKAKSKKIPLGGIPS 461
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 445
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 446 VVKAKSKKIPLGGIPS 461
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 218 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 275
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 276 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 334
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 335 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 392
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 393 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 447
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 448 VVKAKSKKIPLGGIPS 463
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q + + +L DP ++ ++ I L AG +T++
Sbjct: 221 LVDKIIADRKASGEQSDDLLTHML--HGKDPETGEPLDDENIRYQIVTFLIAGHETTSGL 278
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ + + L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 279 LSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 337
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 338 -SLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 395
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 396 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 450
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 451 VVKAKSKKIPLGGIPS 466
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
+ + +L A + +L A +T+A ++ W + L +NP+A ++ +E+ V+ ++ + +D
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED 338
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
+ N+PY++A +KE+MRL P VP R + + Y L K + + +N +G +
Sbjct: 339 LRNMPYLKACLKESMRLTPSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNF 397
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
E ++F P+R++ KE + + + LPFG G+RMC+G L
Sbjct: 398 EDSHKFRPERWLQKEKKI--NPFAHLPFGIGKRMCIGRRLA 436
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGKQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 218 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 275
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 276 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAF 334
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 335 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 392
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 393 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 447
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 448 VVKAKSKKIPLGGIPS 463
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 445
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 446 VVKAKSKKIPLGGIPS 461
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 27/277 (9%)
Query: 230 LQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIER 289
L G K++++V + RF Q+ + R++ +G D+L Q L+ +
Sbjct: 185 LPGKRKQLREVRESI-RFLRQVGRDWVQRRREALKRGEEVPADILTQI-----LKAEEGA 238
Query: 290 HQLKAIIQDLLT---AGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
+ ++ + +T AG +TSA ++ + + L + PE + + E+D VIG R++ +D
Sbjct: 239 QDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFED 298
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
+ L Y+ ++KE++RL+P R+ E+ + G + N+ +L + + +GR T +
Sbjct: 299 LGRLQYLSQVLKESLRLYPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF 357
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKL 466
E P F PDRF + PF G R C+G V+ +A LL E++L
Sbjct: 358 EDPLTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRL 414
Query: 467 -PGDMKRQDLDMEERFGL---TTCKKNPLVVVPTKPR 499
PG +RFGL T K V+ +PR
Sbjct: 415 VPG----------QRFGLQEQATLKPLDPVLCTLRPR 441
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD T+W + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 445
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 446 VVKAKSKKIPLGGIPS 461
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ D T E + + II +L+ AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITELI-AGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 20/248 (8%)
Query: 258 RKKSGKDQGVNDMVDVLVQFAD--DPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAM 315
RK SG+ D+L Q + DP ++ + I L AG +T++ + +A+
Sbjct: 223 RKASGEQSD-----DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFAL 277
Query: 316 SLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVA 375
L+KNP +QK EE RV+ D K + L Y+ ++ E +RL P P A
Sbjct: 278 YFLVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYA 335
Query: 376 REDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHDYELLP 433
+ED + G Y L K V++ I + RD TIW + EF P+RF + H ++ P
Sbjct: 336 KEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--P 392
Query: 434 FGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVV 493
FG+G+R C+G L L +L F+++ D +LD++E T K VV
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKPEGFVV 446
Query: 494 VPTKPRLP 501
++P
Sbjct: 447 KAKSKKIP 454
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L G +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLICGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ P+G+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PYGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 20/260 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG ++++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHESTSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLLLKPEGF 445
Query: 484 ---TTCKKNPLVVVPTKPRL 500
KK PL +P+ L
Sbjct: 446 VVKAKSKKIPLGGIPSPSTL 465
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACEGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACPGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 445
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 446 VVKAKSKKIPLGGIPS 461
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 20/260 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG ++++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHESTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLLLKPEGF 444
Query: 484 ---TTCKKNPLVVVPTKPRL 500
KK PL +P+ L
Sbjct: 445 VVKAKSKKIPLGGIPSPSTL 464
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L G +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIMGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L G +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIEGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L G +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIQGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHENTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L G +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIKGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ PFG+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L G +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIHGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTLKPEGF 444
Query: 484 ---TTCKKNPLVVVPT 496
KK PL +P+
Sbjct: 445 VVKAKSKKIPLGGIPS 460
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 20/260 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLVLKPEGF 444
Query: 484 ---TTCKKNPLVVVPTKPRL 500
KK PL +P+ L
Sbjct: 445 VVKAKSKKIPLGGIPSPSTL 464
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 20/260 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG + ++
Sbjct: 216 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGL 273
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAF 332
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 333 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 390
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLVLKPEGF 445
Query: 484 ---TTCKKNPLVVVPTKPRL 500
KK PL +P+ L
Sbjct: 446 VVKAKSKKIPLGGIPSPSTL 465
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ P+G+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PWGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ P G+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PHGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 20/260 (7%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG ++++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHESTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL----- 483
++ PFG+G+R C+G L L +L F+++ D +LD++E L
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETQLLKPEGF 444
Query: 484 ---TTCKKNPLVVVPTKPRL 500
KK PL +P+ L
Sbjct: 445 VVKAKSKKIPLGGIPSPSTL 464
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 251 ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALN 310
++D+ A +K+ +Q +D++ ++ DP ++ ++ I L AG +T++
Sbjct: 215 LVDKIIADRKASGEQS-DDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL 370
+ +A+ L+KNP +QKA EE RV+ D K + L Y+ ++ E +RL P P
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 371 IPRVAREDCKVAG-YDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHD 428
A+ED + G Y L K +++ I + RD TIW + EF P+RF + H
Sbjct: 332 -SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHA 389
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK 488
++ P G+G+R C+G L L +L F+++ D +LD++E T K
Sbjct: 390 FK--PAGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETL---TLKP 441
Query: 489 NPLVVVPTKPRLP 501
VV ++P
Sbjct: 442 EGFVVKAKSKKIP 454
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 27/253 (10%)
Query: 217 DIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ 276
DI I WL + VK +KD E ++ E+ R++ ++ + + +D
Sbjct: 232 DIFFKISWLYK-KYEKSVKDLKDA-------IEVLIAEK--RRRISTEEKLEECMD---- 277
Query: 277 FADDPTLEVK---IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELD 333
FA + L K + R + I ++L A DT ++++ + + L+ K+P + +E+
Sbjct: 278 FATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQ 337
Query: 334 RVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVL 393
VIG +R ++ DI L ++ + E+MR PVV L++ R A ED + GY + K + ++
Sbjct: 338 TVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNII 395
Query: 394 INIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELL-PFGSGRRMCLGYGLGLKLVQ 452
+NI + R + KPNEF + F K Y PFG G R C G + + +++
Sbjct: 396 LNIGRMHR-LEFFPKPNEFTLENF------AKNVPYRYFQPFGFGPRGCAGKYIAMVMMK 448
Query: 453 SSLANLLHGFEWK 465
+ L LL F K
Sbjct: 449 AILVTLLRRFHVK 461
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 160/361 (44%), Gaps = 38/361 (10%)
Query: 119 SPYWRQARKICVMELLSPKRLDQF---------EYMRVEERKLFLHDMFKSCSKPVQLKD 169
S W++ R E+++P+ F +++ V R++ S + + D
Sbjct: 101 SAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRI---KKAGSGNYSGDISD 157
Query: 170 RLYMLNLSTMSRMVLGKRYTEEDENNIVTP--KEFTEMLEELFLVHGTLDIGDAIPWLAP 227
L+ +++ ++ G+R +E +V P + F + + ++F H ++ + + P L
Sbjct: 158 DLFRFAFESITNVIFGERQGMLEE--VVNPEAQRFIDAIYQMF--HTSVPMLNLPPDLFR 213
Query: 228 LDLQGHVKRMKDVNRKLDRFYEQ--ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEV 285
L K KD D + + I + + + K +D +L + D
Sbjct: 214 L---FRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDS---- 266
Query: 286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEK 345
K+ +KA + ++L G DT+++ ++W + + +N K + L + R +
Sbjct: 267 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQG 322
Query: 346 DIVNL----PYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
D+ + P ++A +KET+RLHP+ + + R D + Y + + V + I+ +GR
Sbjct: 323 DMATMLQLVPLLKASIKETLRLHPI-SVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGR 381
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
+PT + P F P R++ K+ ++ + L FG G R CLG + + L N+L
Sbjct: 382 EPTFFFDPENFDPTRWLSKDKNITY--FRNLGFGWGVRQCLGRRIAELEMTIFLINMLEN 439
Query: 462 F 462
F
Sbjct: 440 F 440
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 16/210 (7%)
Query: 235 KRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADD---PTLEVKIERHQ 291
+R D L ++I+ ER A SG Q +D++ L++ DD P E +I Q
Sbjct: 214 RRFNDALADLHLLVDEIIAERRA---SG--QKPDDLLTALLEAKDDNGDPIGEQEIH-DQ 267
Query: 292 LKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLP 351
+ AI LT G++T A + W + L +PE + +E++ V G R V +D+ L
Sbjct: 268 VVAI----LTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLR 322
Query: 352 YIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
+ ++ E MRL P V +L R E ++ GY + + ++ + + I RDP ++ E
Sbjct: 323 HTGNVIVEAMRLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLE 381
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMC 441
F PDR++ E Y + PF +G+R C
Sbjct: 382 FDPDRWL-PERAANVPKYAMKPFSAGKRKC 410
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 160/361 (44%), Gaps = 38/361 (10%)
Query: 119 SPYWRQARKICVMELLSPKRLDQF---------EYMRVEERKLFLHDMFKSCSKPVQLKD 169
S W++ R E+++P+ F +++ V R++ S + + D
Sbjct: 104 SAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRI---KKAGSGNYSGDISD 160
Query: 170 RLYMLNLSTMSRMVLGKRYTEEDENNIVTP--KEFTEMLEELFLVHGTLDIGDAIPWLAP 227
L+ +++ ++ G+R +E +V P + F + + ++F H ++ + + P L
Sbjct: 161 DLFRFAFESITNVIFGERQGMLEE--VVNPEAQRFIDAIYQMF--HTSVPMLNLPPDLFR 216
Query: 228 LDLQGHVKRMKDVNRKLDRFYEQ--ILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEV 285
L K KD D + + I + + + K +D +L + D
Sbjct: 217 L---FRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDS---- 269
Query: 286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEK 345
K+ +KA + ++L G DT+++ ++W + + +N K + L + R +
Sbjct: 270 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQG 325
Query: 346 DIVNL----PYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
D+ + P ++A +KET+RLHP+ + + R D + Y + + V + I+ +GR
Sbjct: 326 DMATMLQLVPLLKASIKETLRLHPI-SVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGR 384
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHG 461
+PT + P F P R++ K+ ++ + L FG G R CLG + + L N+L
Sbjct: 385 EPTFFFDPENFDPTRWLSKDKNITY--FRNLGFGWGVRQCLGRRIAELEMTIFLINMLEN 442
Query: 462 F 462
F
Sbjct: 443 F 443
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 283 LEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWV 342
L+ ++ +KA +L DT+A + + L +NP+ Q +E
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEH 328
Query: 343 QEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRD 402
+K LP ++A +KET+RL+PV L + RV D + Y + + V + ++++GR+
Sbjct: 329 PQKATTELPLLRAALKETLRLYPV-GLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRN 387
Query: 403 PTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLG 443
++ +P + P R++ +I G ++ +PFG G R CLG
Sbjct: 388 AALFPRPERYNPQRWL--DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 175/386 (45%), Gaps = 30/386 (7%)
Query: 119 SPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQ------LKDRLY 172
S W++ R + E+++P+ + F + + F+ + K + +K+ L+
Sbjct: 106 SGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLF 165
Query: 173 MLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPL---- 228
+++ ++ G+R +E ++F + + ++F H ++ + + P L L
Sbjct: 166 HFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMF--HTSVPLLNVPPELYRLFRTK 223
Query: 229 DLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIE 288
+ HV + K ++ Y +I + RK ++ ++ L++ K+
Sbjct: 224 TWRDHVAAWDTIFNKAEK-YTEIFYQDLRRKTEFRN--YPGILYCLLK-------SEKML 273
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIV 348
+KA I ++L G +T+++ ++W + + ++ + EE+ + K +
Sbjct: 274 LEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQ 333
Query: 349 NLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEK 408
+P ++A +KET+RLHP+ + + R D + Y + + V + I+ +GRDP +
Sbjct: 334 MVPLLKASIKETLRLHPI-SVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 409 PNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
P++F P R++ K+ D+ + L FG G R C+G + + L ++L F+ ++
Sbjct: 393 PDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM-- 448
Query: 469 DMKRQDLDMEERFGLTTCKKNPLVVV 494
+ D++ F L P+ +V
Sbjct: 449 ---QHIGDVDTIFNLILTPDKPIFLV 471
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 170/384 (44%), Gaps = 29/384 (7%)
Query: 90 HDLSFSSRPQLLAGKYLTYDYT---GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYM 145
H FS R ++L+ + + T G G A +PY R ++ + E L+ + F
Sbjct: 72 HSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA 131
Query: 146 RVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEM 205
E + F+ + +K + L + + ++T + + G ED + + F ++
Sbjct: 132 IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFG-----EDLRKRLNARHFAQL 186
Query: 206 LEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQ 265
L ++ + +PWL L L R ++ +L + +I+ R ++++ KD
Sbjct: 187 LSKM--ESSLIPAAVFMPWLLRLPLP-QSARCREARAELQKILGEIIVAR-EKEEASKDN 242
Query: 266 GVNDMVDVLVQFA-DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLL--KNP 322
+D++ L++ D T ++ H++ +I + AG TS + W+M L+ KN
Sbjct: 243 NTSDLLGGLLKAVYRDGT---RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNK 299
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA 382
+ + K +E+D + + D +P+ + V+E++R P + L++ R+ + + KV
Sbjct: 300 KWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVG 356
Query: 383 GYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCL 442
Y + K + + D + P + P+R D K D + FG+G C+
Sbjct: 357 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAGVHKCI 409
Query: 443 GYGLGLKLVQSSLANLLHGFEWKL 466
G L V++ LA ++++L
Sbjct: 410 GQKFALLQVKTILATAFREYDFQL 433
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 170/384 (44%), Gaps = 29/384 (7%)
Query: 90 HDLSFSSRPQLLAGKYLTYDYT---GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYM 145
H FS R ++L+ + + T G G A +PY R ++ + E L+ + F
Sbjct: 63 HSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA 122
Query: 146 RVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEM 205
E + F+ + +K + L + + ++T + + G ED + + F ++
Sbjct: 123 IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFG-----EDLRKRLNARHFAQL 177
Query: 206 LEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQ 265
L ++ + +PWL L L R ++ +L + +I+ R ++++ KD
Sbjct: 178 LSKM--ESSLIPAAVFMPWLLRLPLP-QSARCREARAELQKILGEIIVAR-EKEEASKDN 233
Query: 266 GVNDMVDVLVQFA-DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLL--KNP 322
+D++ L++ D T ++ H++ +I + AG TS + W+M L+ KN
Sbjct: 234 NTSDLLGGLLKAVYRDGT---RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNK 290
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA 382
+ + K +E+D + + D +P+ + V+E++R P + L++ R+ + + KV
Sbjct: 291 KWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVG 347
Query: 383 GYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCL 442
Y + K + + D + P + P+R D K D + FG+G C+
Sbjct: 348 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAGVHKCI 400
Query: 443 GYGLGLKLVQSSLANLLHGFEWKL 466
G L V++ LA ++++L
Sbjct: 401 GQKFALLQVKTILATAFREYDFQL 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 170/384 (44%), Gaps = 29/384 (7%)
Query: 90 HDLSFSSRPQLLAGKYLTYDYT---GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYM 145
H FS R ++L+ + + T G G A +PY R ++ + E L+ + F
Sbjct: 57 HSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA 116
Query: 146 RVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEM 205
E + F+ + +K + L + + ++T + + G ED + + F ++
Sbjct: 117 IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFG-----EDLRKRLNARHFAQL 171
Query: 206 LEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQ 265
L ++ + +PWL L L R ++ +L + +I+ R ++++ KD
Sbjct: 172 LSKM--ESSLIPAAVFMPWLLRLPLP-QSARCREARAELQKILGEIIVAR-EKEEASKDN 227
Query: 266 GVNDMVDVLVQFA-DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLL--KNP 322
+D++ L++ D T ++ H++ +I + AG TS + W+M L+ KN
Sbjct: 228 NTSDLLGGLLKAVYRDGT---RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNK 284
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA 382
+ + K +E+D + + D +P+ + V+E++R P + L++ R+ + + KV
Sbjct: 285 KWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVG 341
Query: 383 GYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCL 442
Y + K + + D + P + P+R D K D + FG+G C+
Sbjct: 342 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAGVHKCI 394
Query: 443 GYGLGLKLVQSSLANLLHGFEWKL 466
G L V++ LA ++++L
Sbjct: 395 GQKFALLQVKTILATAFREYDFQL 418
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 24/273 (8%)
Query: 203 TEMLEELFLVHGTLDIG-DAIPWLAP--LDLQGHVKRMKDVNRKLDRFYEQILDERYARK 259
+++ E++ ++ LD G WL P L L +R + D FY+ I R +++
Sbjct: 169 SQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE 228
Query: 260 KSGKDQGVNDMVDVLVQFADDPTLE--VKIERHQLKAIIQDLLTAGTDTSALNVEWAMSL 317
K ++D++ L+ D T + + ++ ++ LL AG TS+ W
Sbjct: 229 K------IDDILQTLL----DATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFF 278
Query: 318 LLKNPEAIQKATEELDRVIGRD----RWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPR 373
L ++ +K E V G + + Q KD+ NL + +KET+RL P + +++ R
Sbjct: 279 LARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDL-NL--LDRCIKETLRLRPPIMIMM-R 334
Query: 374 VAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLP 433
+AR VAGY + +V ++ R W + +F PDR++ ++ G + +P
Sbjct: 335 MARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL-QDNPASGEKFAYVP 393
Query: 434 FGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKL 466
FG+GR C+G +++ + +L +E+ L
Sbjct: 394 FGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDL 426
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 174/389 (44%), Gaps = 30/389 (7%)
Query: 90 HDLSFSSRPQLLAGKYLTYDYT----GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEY 144
H F+ R ++L+ + + Y + G G A +PY R ++ + E L+ + F
Sbjct: 58 HSKFFTPRNEILSPREV-YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAP 116
Query: 145 MRVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTE 204
E + F+ + + + D + ++T + + G ED + ++F +
Sbjct: 117 SIQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFG-----EDLRKRLDARQFAQ 171
Query: 205 MLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKD 264
+L ++ + +PW+ L L R +D +L +I+ R ++++ KD
Sbjct: 172 LLAKM--ESCLIPAAVFLPWILKLPLP-QSYRCRDARAELQDILSEIIIAR-EKEEAQKD 227
Query: 265 QGVNDMV-DVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLL--KN 321
+D++ +L D T ++ +H++ +I + AG TS + W++ L+ +N
Sbjct: 228 TNTSDLLAGLLGAVYRDGT---RMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRN 284
Query: 322 PEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKV 381
+ K +E+D + + + + +P+ + +E++R P + +L+ +V + +V
Sbjct: 285 KRHLAKLHQEIDEFPAQLNY--DNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKP-VQV 341
Query: 382 AGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMC 441
Y + + + + +D + P E+ P+R ++K D FG+G C
Sbjct: 342 GKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKC 395
Query: 442 LGYGLGLKLVQSSLANLLHGFEWKLPGDM 470
+G GL V++ LA +L ++++L G +
Sbjct: 396 IGEKFGLLQVKTVLATVLRDYDFELLGPL 424
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 313 WAMSLLLKNPEAIQKATEELDRVI----------GRDRWVQEKDIVNLPYIQAIVKETMR 362
W++ +++NPEA++ ATEE+ R + G + + ++ +LP + +I+KE++R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 363 LHPVVPLLIPRVAREDCKV----AGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
L L R A+ED + Y++ K+ + + + DP I+ P F DR++
Sbjct: 339 LSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 419 GKEIDVKGH--------DYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKL-PGD 469
+ K Y +PFGSG +C G + ++ L +L FE +L G
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456
Query: 470 MKRQDLDMEERFGL 483
K LD + R GL
Sbjct: 457 AKCPPLD-QSRAGL 469
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 313 WAMSLLLKNPEAIQKATEELDRVI----------GRDRWVQEKDIVNLPYIQAIVKETMR 362
W++ +++NPEA++ ATEE+ R + G + + ++ +LP + +I+KE++R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 363 LHPVVPLLIPRVAREDCKV----AGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
L L R A+ED + Y++ K+ + + + DP I+ P F DR++
Sbjct: 339 LSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 419 GKEIDVKGH--------DYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKL-PGD 469
+ K Y +PFGSG +C G + ++ L +L FE +L G
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456
Query: 470 MKRQDLDMEERFGL 483
K LD + R GL
Sbjct: 457 AKCPPLD-QSRAGL 469
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 9/218 (4%)
Query: 254 ERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAG--TDTSALNV 311
E+ + + + D + +L+ DD + + +LK I LL AG T TSAL+
Sbjct: 208 EKIIKARQQQPPSEEDALGILLAARDDNNQPLSLP--ELKDQILLLLFAGHETLTSALS- 264
Query: 312 EWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLI 371
+ LLL I++ + + + + + + +PY+ +++E +RL P V
Sbjct: 265 --SFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGF 322
Query: 372 PRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYEL 431
R +DC+ G+ K V I DP ++ P +F P+RF +
Sbjct: 323 -RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAH 381
Query: 432 LPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWK-LPG 468
+PFG G R CLG ++ L+ F+W LPG
Sbjct: 382 VPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG 419
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 354 QAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFW 413
+ V+E R +P P L V ++D + K + VL++++ DP +W+ P+EF
Sbjct: 277 EMFVQEVRRYYPFGPFLGALV-KKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 414 PDRFIGKEIDVKGHDYELLPFGSGR----RMCLGYGLGLKLVQSSLANLLHGFEWKLP 467
P+RF +E ++ ++++P G G C G G+ ++++++SL L+H E+ +P
Sbjct: 336 PERFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 150/363 (41%), Gaps = 34/363 (9%)
Query: 112 GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDR 170
G G A +PY R ++ + E L+ + F E + F+ + + L +
Sbjct: 97 GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLED 156
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
+ ++T + + G ED + + F ++L ++ +L +
Sbjct: 157 CSTMIINTACQCLFG-----EDLRKRLDARRFAQLLAKM---ESSLIPAAVFLPILLKLP 208
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ--FADDPTLEVKIE 288
R + +L + +I+ R A KD +D++ L+ + D + +
Sbjct: 209 LPQSARCHEARTELQKILSEIIIARKA-AAVNKDSSTSDLLSGLLSAVYRDGTPMSL--- 264
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLL-----KNPEAIQKATEELDRVIGRDRWVQ 343
H++ +I + AG TS++ W+M L+ K+ EA++K EE + + +
Sbjct: 265 -HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD 323
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
E +P+ + +E++R P + L++ R D KV Y + K + + D
Sbjct: 324 E-----MPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDE 377
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ +P + P+R + V+G + FG+G C+G GL V++ LA ++
Sbjct: 378 EAFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 430
Query: 464 WKL 466
++L
Sbjct: 431 FQL 433
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 152/363 (41%), Gaps = 34/363 (9%)
Query: 112 GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDR 170
G G A +PY R ++ + E L+ + F E + F+ + + L +
Sbjct: 84 GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLED 143
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
+ ++T + + G ED + + F ++L ++ +L +
Sbjct: 144 CSTMIINTACQCLFG-----EDLRKRLDARRFAQLLAKM---ESSLIPAAVFLPILLKLP 195
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ--FADDPTLEVKIE 288
R + +L + +I+ R ++ KD +D++ L+ + D + +
Sbjct: 196 LPQSARCHEARTELQKILSEIIIAR-KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSL--- 251
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLL-----KNPEAIQKATEELDRVIGRDRWVQ 343
H++ +I + AG TS++ W+M L+ K+ EA++K EE + + +
Sbjct: 252 -HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD 310
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
E +P+ + +E++R P + +L+ +V D KV Y + K + + D
Sbjct: 311 E-----MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDE 364
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ +P + P+R + V+G + FG+G C+G GL V++ LA ++
Sbjct: 365 EAFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 417
Query: 464 WKL 466
++L
Sbjct: 418 FQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 152/363 (41%), Gaps = 34/363 (9%)
Query: 112 GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDR 170
G G A +PY R ++ + E L+ + F E + F+ + + L +
Sbjct: 85 GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLED 144
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
+ ++T + + G ED + + F ++L ++ +L +
Sbjct: 145 CSTMIINTACQCLFG-----EDLRKRLDARRFAQLLAKM---ESSLIPAAVFLPILLKLP 196
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ--FADDPTLEVKIE 288
R + +L + +I+ R ++ KD +D++ L+ + D + +
Sbjct: 197 LPQSARCHEARTELQKILSEIIIAR-KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSL--- 252
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLL-----KNPEAIQKATEELDRVIGRDRWVQ 343
H++ +I + AG TS++ W+M L+ K+ EA++K EE + + +
Sbjct: 253 -HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD 311
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
E +P+ + +E++R P + +L+ +V D KV Y + K + + D
Sbjct: 312 E-----MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDE 365
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ +P + P+R + V+G + FG+G C+G GL V++ LA ++
Sbjct: 366 EAFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 418
Query: 464 WKL 466
++L
Sbjct: 419 FQL 421
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 151/363 (41%), Gaps = 34/363 (9%)
Query: 112 GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDR 170
G G A +PY R ++ + E L+ + F E + F+ + + L +
Sbjct: 97 GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLED 156
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
+ ++T + + G ED + + F ++L ++ +L +
Sbjct: 157 CSTMIINTACQCLFG-----EDLRKRLDARRFAQLLAKM---ESSLIPAAVFLPILLKLP 208
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ--FADDPTLEVKIE 288
R + +L + +I+ R ++ KD +D++ L+ + D + +
Sbjct: 209 LPQSARCHEARTELQKILSEIIIAR-KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSL--- 264
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLL-----KNPEAIQKATEELDRVIGRDRWVQ 343
H++ +I + AG TS++ W+M L+ K+ EA++K EE + + +
Sbjct: 265 -HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD 323
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
E +P+ + +E++R P + L++ R D KV Y + K + + D
Sbjct: 324 E-----MPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDE 377
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ +P + P+R + V+G + FG+G C+G GL V++ LA ++
Sbjct: 378 EAFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 430
Query: 464 WKL 466
++L
Sbjct: 431 FQL 433
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 152/363 (41%), Gaps = 34/363 (9%)
Query: 112 GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDR 170
G G A +PY R ++ + E L+ + F E + F+ + + L +
Sbjct: 84 GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLED 143
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
+ ++T + + G ED + + F ++L ++ +L +
Sbjct: 144 CSTMIINTACQCLFG-----EDLRKRLDARRFAQLLAKM---ESSLIPAAVFLPILLKLP 195
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ--FADDPTLEVKIE 288
R + +L + +I+ R ++ KD +D++ L+ + D + +
Sbjct: 196 LPQSARCHEARTELQKILSEIIIAR-KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSL--- 251
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLL-----KNPEAIQKATEELDRVIGRDRWVQ 343
H++ +I + AG TS++ W+M L+ K+ EA++K EE + + +
Sbjct: 252 -HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD 310
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
E +P+ + +E++R P + +L+ +V D KV Y + K + + D
Sbjct: 311 E-----MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDE 364
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ +P + P+R + V+G + FG+G C+G GL V++ LA ++
Sbjct: 365 EAFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 417
Query: 464 WKL 466
++L
Sbjct: 418 FQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 152/363 (41%), Gaps = 34/363 (9%)
Query: 112 GMGTAPYSPYWRQARKICVM-ELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDR 170
G G A +PY R ++ + E L+ + F E + F+ + + L +
Sbjct: 83 GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLED 142
Query: 171 LYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDL 230
+ ++T + + G ED + + F ++L ++ +L +
Sbjct: 143 CSTMIINTACQCLFG-----EDLRKRLDARRFAQLLAKM---ESSLIPAAVFLPILLKLP 194
Query: 231 QGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQ--FADDPTLEVKIE 288
R + +L + +I+ R ++ KD +D++ L+ + D + +
Sbjct: 195 LPQSARCHEARTELQKILSEIIIAR-KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSL--- 250
Query: 289 RHQLKAIIQDLLTAGTDTSALNVEWAMSLLL-----KNPEAIQKATEELDRVIGRDRWVQ 343
H++ +I + AG TS++ W+M L+ K+ EA++K EE + + +
Sbjct: 251 -HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD 309
Query: 344 EKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDP 403
E +P+ + +E++R P + +L+ +V D KV Y + K + + D
Sbjct: 310 E-----MPFAERCARESIRRDPPLLMLMRKVM-ADVKVGSYVVPKGDIIACSPLLSHHDE 363
Query: 404 TIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
+ +P + P+R + V+G + FG+G C+G GL V++ LA ++
Sbjct: 364 EAFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 416
Query: 464 WKL 466
++L
Sbjct: 417 FQL 419
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
ND++ +L+Q D + ++ +L A++ ++ AGTDT+ + +A+ LL++PEA++
Sbjct: 223 NDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALEL 279
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
E ++ + E +R ++ + R AR+D + G +
Sbjct: 280 VKAEPG------------------LMRNALDEVLRFENILRIGTVRFARQDLEYCGASIK 321
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
K V + I + RD T++ +P+ F DV+ L +G G +C G L
Sbjct: 322 KGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVSLA 371
Query: 448 LKLVQSSLANLLHGF-EWKL 466
+ ++ + F E KL
Sbjct: 372 RLEAEIAVGTIFRRFPEMKL 391
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
ND++ +L+Q D + ++ +L A++ ++ AGTDT+ + +A+ LL++PEA++
Sbjct: 223 NDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALEL 279
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
E ++ + E +R ++ + R AR+D + G +
Sbjct: 280 VKAEPG------------------LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIK 321
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
K V + I + RD T++ +P+ F DV+ L +G G +C G L
Sbjct: 322 KGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVSLA 371
Query: 448 LKLVQSSLANLLHGF-EWKL 466
+ ++ + F E KL
Sbjct: 372 RLEAEIAVGTIFRRFPEMKL 391
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 240 VNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDL 299
V + L R ++ ++ RK D +D+V F D ++ ++L+ ++ +
Sbjct: 199 VEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRA---FHDG-----VLDDYELRTLVATV 250
Query: 300 LTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKE 359
L AG +T+ + AM ++P D+W++ K+ N V+E
Sbjct: 251 LVAGYETTNHQLALAMYDFAQHP----------------DQWMKIKE--NPELAPQAVEE 292
Query: 360 TMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIG 419
+R P +P+ RVA ED +V G + + V + RDP ++ + F
Sbjct: 293 VLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF------- 345
Query: 420 KEIDVKGHDYELLPFGSGRRMCLGYGLG-LKLVQSSLA 456
+I VK + + FG G CLG L L+L ++ A
Sbjct: 346 -DITVK-REAPSIAFGGGPHFCLGTALARLELTEAVAA 381
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 240 VNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDL 299
V + L R ++ ++ RK D +D+V F D ++ ++L+ ++ +
Sbjct: 189 VEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRA---FHDG-----VLDDYELRTLVATV 240
Query: 300 LTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKE 359
L AG +T+ + AM ++P D+W++ K+ N V+E
Sbjct: 241 LVAGYETTNHQLALAMYDFAQHP----------------DQWMKIKE--NPELAPQAVEE 282
Query: 360 TMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIG 419
+R P +P+ RVA ED +V G + + V + RDP ++ + F
Sbjct: 283 VLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF------- 335
Query: 420 KEIDVKGHDYELLPFGSGRRMCLGYGLG-LKLVQSSLA 456
+I VK + + FG G CLG L L+L ++ A
Sbjct: 336 -DITVK-REAPSIAFGGGPHFCLGTALARLELTEAVAA 371
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 354 QAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFW 413
A+++ETMR P V L+ R A +D + + + K +L+ + RDPTI P+ F
Sbjct: 290 SAVIEETMRYDPPV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 414 PDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF-EWKLPGD 469
PDR L FG G CLG L +L L F E +L G+
Sbjct: 349 PDR----------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE 395
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL AG +T+ + L+++PE I V+ RD + +V+
Sbjct: 240 LLVAGHETTVNAIALGALTLIQHPEQID--------VLLRDPGA----------VSGVVE 281
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R V ++ R+A+ED +V G + VL++I + RD +E P+ F
Sbjct: 282 ELLRFTSVSDHIV-RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIF------ 334
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
D + + + FG G CLG L ++ L L G ++PG
Sbjct: 335 ----DARRNARHHVGFGHGIHQCLGQ----NLARAELEIALGGLFARIPG 376
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 263 KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNP 322
K++ VN D++ + + + A+I ++L A T+ + + + LL NP
Sbjct: 230 KERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP 289
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA 382
E +++ V+ DR + + I ET+R P V L IPR +D V
Sbjct: 290 E-------QMNDVLA-DRSLVPRAIA----------ETLRYKPPVQL-IPRQLSQDTVVG 330
Query: 383 GYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRF-IGKEIDVKGHDYELLPFGSGRRMC 441
G ++ K++ V I RDP +E+P+ F R +G + G L FGSG C
Sbjct: 331 GMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARH-LAFGSGIHNC 389
Query: 442 LGYGLG 447
+G
Sbjct: 390 VGTAFA 395
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 23/238 (9%)
Query: 280 DPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRD 339
D ++ +++R + ++Q +T G A W M LL +PEA++ EE+ G+
Sbjct: 246 DEGIDAEMQRRAM--LLQLWVTQGNAGPA--AFWVMGYLLTHPEALRAVREEIQG--GKH 299
Query: 340 RWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA-----GYDLLKNSRVLI 394
++E+ N P +++ ET+RL LI R +D K+ Y L + R+ +
Sbjct: 300 LRLEERQ-KNTPVFDSVLWETLRL--TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCV 356
Query: 395 NIWTIGR-DPTIWEKPNEFWPDRFIGKEIDVKGH--------DYELLPFGSGRRMCLGYG 445
+ + DP I ++P F DRF+ + K Y +P+G+ +C G
Sbjct: 357 FPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRH 416
Query: 446 LGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRLPHH 503
+ ++ + +L F+ +L L R+G + + + + R HH
Sbjct: 417 FAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRFHHH 474
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 37/175 (21%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
L AG +T+ + ++ LL++PE + K E D I V+
Sbjct: 231 LAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVE 272
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R + RVA ED + G + + +V + + RDP+I+ P+ F
Sbjct: 273 ECLRYESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF------ 325
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLH--------GFEWK 465
D+ L FG G +CLG L Q ++ LL FEW+
Sbjct: 326 ----DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWR 376
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 45/258 (17%)
Query: 228 LDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKI 287
LD KR + K R+ ++ AR++ K+ G + V+ ++ DD T E
Sbjct: 174 LDASLSQKRRAALGDKFSRYLLAMI----ARER--KEPGEGMIGAVVAEYGDDATDE--- 224
Query: 288 ERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDI 347
+L+ ++ AG D + + + +L++PE ++D G ++ Q
Sbjct: 225 ---ELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPE-------QIDAFRGDEQSAQRA-- 272
Query: 348 VNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWE 407
V E +R V PR+ARED +AG ++ K V+ ++ RDP +
Sbjct: 273 ---------VDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPAL-- 321
Query: 408 KPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLP 467
PD +DV + FG G CLG L +++ L W+
Sbjct: 322 -----APDV---DRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTEL-----WRRF 368
Query: 468 GDMKRQDLDMEERFGLTT 485
++ D + F LTT
Sbjct: 369 PALRLADPAQDTEFRLTT 386
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
VQ+ D Y + V+E R +P P ++ R A +D + G + +V+++++
Sbjct: 268 VQQPD-----YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNH 321
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM----CLGYGLGLKLVQSSLAN 457
D W P EF P+RF + D + +P G G C G + L +++ +
Sbjct: 322 DAATWADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHL 377
Query: 458 LLHGFEWKLPGDMKRQDLDME 478
L++ + +P QDL ++
Sbjct: 378 LVNAMRYDVPD----QDLSID 394
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
VQ+ D Y + V+E R +P P ++ R A +D + G + +V+++++
Sbjct: 268 VQQPD-----YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNH 321
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM----CLGYGLGLKLVQSSLAN 457
D W P EF P+RF + D + +P G G C G + L +++ +
Sbjct: 322 DAATWADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHL 377
Query: 458 LLHGFEWKLPGDMKRQDLDME 478
L++ + +P QDL ++
Sbjct: 378 LVNAMRYDVPD----QDLSID 394
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 311 VEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVN--LPYIQAIVKETMRLHPVVP 368
+++ M L++ E + RVI + DI++ L V+ET+R + +
Sbjct: 179 IKYIMLLIIGGNETTTNLIGNMIRVID-----ENPDIIDDALKNRSGFVEETLRYYSPIQ 233
Query: 369 LLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHD 428
L R A ED + + K +V++ + + RD T +++P+ F R +E+
Sbjct: 234 FLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR---REMH----- 285
Query: 429 YELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFE 463
L FG G MCLG L +L ++L+ F+
Sbjct: 286 ---LAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
VQ+ D Y + V+E R +P P ++ R A +D + G + +V+++++
Sbjct: 260 VQQPD-----YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNH 313
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM----CLGYGLGLKLVQSSLAN 457
D W P EF P+RF + D + +P G G C G + L +++ +
Sbjct: 314 DAATWADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHL 369
Query: 458 LLHGFEWKLPGDMKRQDLDME 478
L++ + +P QDL ++
Sbjct: 370 LVNAMRYDVPD----QDLSID 386
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
VQ+ D Y + V+E R +P P ++ R A +D + G + +V+++++
Sbjct: 260 VQQPD-----YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNH 313
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM----CLGYGLGLKLVQSSLAN 457
D W P EF P+RF + D + +P G G C G + L +++ +
Sbjct: 314 DAATWADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHL 369
Query: 458 LLHGFEWKLPGDMKRQDLDME 478
L++ + +P QDL ++
Sbjct: 370 LVNAMRYDVPD----QDLSID 386
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
VQ+ D Y + V+E R +P P ++ R A +D + G + +V+++++
Sbjct: 260 VQQPD-----YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNH 313
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM----CLGYGLGLKLVQSSLAN 457
D W P EF P+RF + D + +P G G C G + L +++ +
Sbjct: 314 DAATWADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHL 369
Query: 458 LLHGFEWKLPGDMKRQDLDME 478
L++ + +P QDL ++
Sbjct: 370 LVNAMRYDVPD----QDLSID 386
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGR 401
VQ+ D Y + V+E R +P P ++ R A +D + G + +V+++++
Sbjct: 268 VQQPD-----YAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNH 321
Query: 402 DPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM----CLGYGLGLKLVQSSLAN 457
D W P EF P+RF + D + +P G G C G + L +++ +
Sbjct: 322 DAATWADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHL 377
Query: 458 LLHGFEWKLPGDMKRQDLDME 478
L++ + +P QDL ++
Sbjct: 378 LVNAMRYDVPD----QDLSID 394
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 31/162 (19%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I+ + A + TAG DT++ + A+ L +NPE Q A + D +
Sbjct: 252 IDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPE--QLALAKSDPAL---------- 299
Query: 347 IVNLPYIQAIVKETMR-LHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTI 405
I +V E +R PV + R A D +V G ++ + R++++ + RD +
Sbjct: 300 ------IPRLVDEAVRWTAPVKSFM--RTALADTEVRGQNIKRGDRIMLSYPSANRDEEV 351
Query: 406 WEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ P+EF RF + L FG G MCLG L
Sbjct: 352 FSNPDEFDITRFPNRH----------LGFGWGAHMCLGQHLA 383
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
+D++ L++ DD + ++ +L +I LL AG +TS + LLL +P+ +
Sbjct: 209 DDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLA- 265
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
+ +D LP V+E +R + P R A E+ ++ G +
Sbjct: 266 --------------LVRRDPSALPNA---VEEILR-YIAPPETTTRFAAEEVEIGGVAIP 307
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ S VL+ RDP + P+ F R D +GH L FG G C+G L
Sbjct: 308 QYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLA 357
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 313 WAMSLLLKNPEAIQKATEELDRV-------IGRDRWVQEKDIVNLPYIQAIVKETMRLHP 365
W + LLKNPEA+ EL+ + + + + +K + + P + +++ E++RL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA 331
Query: 366 --------VVPLLIPRV-AREDCKVAGYDLLKNSRVLI-NIWTIGRDPTIWEKPNEFWPD 415
VV L +P RE ++L + R+L+ + RDP I+ P F +
Sbjct: 332 APFITREVVVDLAMPMADGRE------FNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYN 385
Query: 416 RFIGKEIDVKGHDYE--------LLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKL- 466
RF+ + K Y+ +P+G+G CLG + ++ + +L + +L
Sbjct: 386 RFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELI 445
Query: 467 PGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRL-PHH 503
D++ + D+ R+G + P VP + R+ PHH
Sbjct: 446 NADVEIPEFDL-SRYGFGLMQ--PEHDVPVRYRIRPHH 480
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 38/200 (19%)
Query: 277 FADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVI 336
F+D T E+ E L +++ LL+AG DT+ + A+ L + P+ + D +
Sbjct: 230 FSD--TGEITPEEAPL--LVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARL--RADPSL 283
Query: 337 GRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINI 396
R+ + +E +R V R D ++AG + + +VL+ +
Sbjct: 284 ARNAF----------------EEAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFL 326
Query: 397 WTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLG---YGLGLKLVQS 453
+ RDP W+ P+ + R GH + FGSG MC+G L ++V +
Sbjct: 327 GSANRDPRRWDDPDRYDITR------KTSGH----VGFGSGVHMCVGQLVARLEGEVVLA 376
Query: 454 SLANLLHGFEWKLPGDMKRQ 473
+LA + E + G +KR+
Sbjct: 377 ALARKVAAIE--IAGPLKRR 394
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
+D++ L++ DD + ++ +L +I LL AG ++S + LLL +P+ +
Sbjct: 209 DDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLA- 265
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
+ +D LP V+E +R + P R A E+ ++ G +
Sbjct: 266 --------------LVRRDPSALPNA---VEEILR-YIAPPETTTRFAAEEVEIGGVAIP 307
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ S VL+ RDP + P+ F R D +GH L FG G C+G L
Sbjct: 308 QYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLA 357
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
+D++ L++ DD + ++ +L +I LL AG ++S + LLL +P+ +
Sbjct: 208 DDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLA- 264
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
+ +D LP V+E +R + P R A E+ ++ G +
Sbjct: 265 --------------LVRRDPSALPNA---VEEILR-YIAPPETTTRFAAEEVEIGGVAIP 306
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ S VL+ RDP + P+ F R D +GH L FG G C+G L
Sbjct: 307 QYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLA 356
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)
Query: 286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEK 345
+I+R +L + LL AG +T+A ++ LL +PE Q A DR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 346 DIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTI 405
+ V+E +R + + RVA D +V G + V++ RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 406 WEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+E P+ +D+ L FG G CLG L
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLA 361
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 33/218 (15%)
Query: 246 RFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTD 305
R YE +LD+ A K++ +DM +L+ DD ++ +L+ + +++AG +
Sbjct: 190 RLYE-VLDQLIAAKRATPG---DDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYE 245
Query: 306 TSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHP 365
T+ ++ A+ LL P+ + + G W +V+ET+R P
Sbjct: 246 TTVNVIDQAVHTLLTRPDQLALVRK------GEVTWAD------------VVEETLRHEP 287
Query: 366 VVPLLIPRVAREDCKVA-GYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDV 424
V L R A D + G + + +L + R P E + F R +
Sbjct: 288 AVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTV------ 341
Query: 425 KGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
E L FG G CLG L V +L +L F
Sbjct: 342 ----KEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)
Query: 286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEK 345
+I+R +L + LL AG +T+A ++ LL +PE Q A DR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 346 DIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTI 405
+ V+E +R + + RVA D +V G + V++ RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 406 WEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+E P+ +D+ L FG G CLG L
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLA 361
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)
Query: 286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEK 345
+I+R +L + LL AG +T+A ++ LL +PE Q A DR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 346 DIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTI 405
+ V+E +R + + RVA D +V G + V++ RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 406 WEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+E P+ +D+ L FG G CLG L
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLA 361
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
+D++ L++ DD + ++ +L +I LL AG + S + LLL +P+ +
Sbjct: 209 DDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA- 265
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
+ +D LP V+E +R + P R A E+ ++ G +
Sbjct: 266 --------------LVRRDPSALPNA---VEEILR-YIAPPETTTRFAAEEVEIGGVAIP 307
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ S VL+ RDP + P+ F R D +GH L FG G C+G L
Sbjct: 308 QYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLA 357
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)
Query: 286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEK 345
+I+R +L + LL AG +T+A ++ LL +PE Q A DR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPE--QYAALRADRSL--------- 276
Query: 346 DIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTI 405
+ V+E +R + + RVA D +V G + V++ RD T+
Sbjct: 277 -------VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329
Query: 406 WEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+E P+ +D+ L FG G CLG L
Sbjct: 330 YEDPD----------ALDIHRSARHHLAFGFGVHQCLGQNLA 361
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
+D++ L++ DD + ++ +L +I LL AG + S + LLL +P+ +
Sbjct: 208 DDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA- 264
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
+ +D LP V+E +R + P R A E+ ++ G +
Sbjct: 265 --------------LVRRDPSALPNA---VEEILR-YIAPPETTTRFAAEEVEIGGVAIP 306
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ S VL+ RDP + P+ F R D +GH L FG G C+G L
Sbjct: 307 QYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLA 356
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 31/180 (17%)
Query: 268 NDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQK 327
+D++ L+ DD + ++ +L +I LL AG + S + LLL +P+ +
Sbjct: 208 DDLLSALISVQDDD--DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA- 264
Query: 328 ATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLL 387
+ D LP V+E +R + P R A E+ ++ G +
Sbjct: 265 --------------LVRADPSALPNA---VEEILR-YIAPPETTTRFAAEEVEIGGVAIP 306
Query: 388 KNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+ S VL+ RDP+ + P+ F R D +GH L FG G C+G L
Sbjct: 307 QYSTVLVANGAANRDPSQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLA 356
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 42/235 (17%)
Query: 234 VKRMKDVNRKL------DRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKI 287
++R D++R L + + LD AR+++ D G+ M+ + D+ T E
Sbjct: 179 IRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMI--VRDHGDNVTDE--- 233
Query: 288 ERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDI 347
+LK + L+ G +T A + + + LL NP I+ E ++
Sbjct: 234 ---ELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKA------------ 278
Query: 348 VNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWE 407
+ +V E +R V PR+A +D + G + VL +I RD +
Sbjct: 279 ------ERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTP 332
Query: 408 KPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
P+ +R ++ FG G C+G L +++ + L F
Sbjct: 333 DPDVLDANRAAVSDVG----------FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 28/149 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LLTAG +T+A + + LL +PE + R V+
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVVKANPGRT------------------PMAVE 283
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R + + R+A ED ++ G + V++++ + DP +++ P
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDP--------- 334
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
+DV+ L FG G CLG L
Sbjct: 335 -AVLDVERGARHHLAFGFGPHQCLGQNLA 362
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 339 DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDL---LKNSRVLIN 395
D V + I +P +++V E++R+ P VP + A+ + + +D +K +L
Sbjct: 316 DGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGK-AKSNFTIESHDATFEVKKGEMLFG 374
Query: 396 IWTIG-RDPTIWEKPNEFWPDRFIG 419
+DP ++++P E+ PDRF+G
Sbjct: 375 YQPFATKDPKVFDRPEEYVPDRFVG 399
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 38/208 (18%)
Query: 263 KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNP 322
+ + +D+V LVQ D + + +L + LL AG +++ + + LL+ P
Sbjct: 218 RKEPTDDLVSALVQARDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP 274
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLP-YIQAIVKETMRLHPV-VPLLIPRVAREDCK 380
E + +++ P I + V+E R P+ V +PR A ED
Sbjct: 275 EL-------------------RRQLLDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVT 315
Query: 381 VAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM 440
+ G + VL + RD +PD IDV + L FG G
Sbjct: 316 LRGVTIRAGEPVLASTGAANRD-------QAQFPD---ADRIDVDRTPNQHLGFGHGVHH 365
Query: 441 CLGYGLGLKLVQSSLANLLHGFEWKLPG 468
CLG L +Q +L LL +LPG
Sbjct: 366 CLGAPLARVELQVALEVLLQ----RLPG 389
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 32/190 (16%)
Query: 288 ERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRV-------IGRDR 340
E Q +A++ L + W + LLKNPEA+ EL+ + + +
Sbjct: 260 EEMQARALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTT 318
Query: 341 WVQEKDIVNLPYIQAIVKETMRLHP--------VVPLLIPRV-AREDCKVAGYDLLKNSR 391
+ +K + + P + +++ E++RL VV L +P RE ++L + R
Sbjct: 319 TLPQKVLDSTPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGRE------FNLRRGDR 372
Query: 392 VLI-NIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYE--------LLPFGSGRRMCL 442
+L+ + RDP I+ P F +RF+ + K Y+ +P+G+G CL
Sbjct: 373 LLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCL 432
Query: 443 GYGLGLKLVQ 452
G + ++
Sbjct: 433 GRSYAVNSIK 442
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H V L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 275 FVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H V L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 31/182 (17%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL A DT+A + +LLL +P+ + E+ ++G V+
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLRED-PSLVGN-----------------AVE 275
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R + RVA D ++ G + K +V+ ++ DP E+P F
Sbjct: 276 ELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF------ 329
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLG---LKLVQSSLANLLHGFEWKLPGDMKRQDL 475
D+ L FG G C+G L L++V +L L G P + R
Sbjct: 330 ----DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRH 385
Query: 476 DM 477
DM
Sbjct: 386 DM 387
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 31/182 (17%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL A DT+A + +LLL +P+ + E+ + V+
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVE 275
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R + RVA D ++ G + K +V+ ++ DP E+P F
Sbjct: 276 ELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF------ 329
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLG---LKLVQSSLANLLHGFEWKLPGDMKRQDL 475
D+ L FG G C+G L L++V +L L G P + R
Sbjct: 330 ----DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRH 385
Query: 476 DM 477
DM
Sbjct: 386 DM 387
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 355 AIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWP 414
A V+E MR P V + R A ED ++ +D+ + SRV+ + + RDP + P+
Sbjct: 289 AAVEELMRYDPPV-QAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPD---- 343
Query: 415 DRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
+DV + FG G CLG L + L LL G
Sbjct: 344 ------VLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 31/172 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL A DT+A + +LLL +P+ + E+ + V+
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVE 275
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R + RVA D ++ G + K +V+ ++ DP E+P F
Sbjct: 276 ELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF------ 329
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLG---LKLVQSSLANLLHGFEWKLP 467
D+ L FG G C+G L L++V +L L G P
Sbjct: 330 ----DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 38/208 (18%)
Query: 263 KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNP 322
+ + +D+V LVQ D + + +L + LL AG +++ + + LL+ P
Sbjct: 218 RKEPTDDLVSALVQARDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP 274
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLP-YIQAIVKETMRLHPV-VPLLIPRVAREDCK 380
E + +++ P I + V+E R P+ V PR A ED
Sbjct: 275 EL-------------------RRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVT 315
Query: 381 VAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM 440
+ G + VL + RD +PD IDV + L FG G
Sbjct: 316 LRGVTIRAGEPVLASTGAANRD-------QAQFPD---ADRIDVDRTPNQHLGFGHGVHH 365
Query: 441 CLGYGLGLKLVQSSLANLLHGFEWKLPG 468
CLG L +Q +L LL +LPG
Sbjct: 366 CLGAPLARVELQVALEVLLQ----RLPG 389
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 357 VKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDR 416
V+E +R P V I RV +E K+ + + V + I + RD +++ P+ F PDR
Sbjct: 244 VEEALRFSPPVMRTI-RVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
Query: 417 FIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLD 476
L FGSG +CLG L + +L F ++ +K++ +D
Sbjct: 303 TPNPH----------LSFGSGIHLCLGAPLARLEARIALEEFAKKF--RVKEIVKKEKID 350
Query: 477 ME 478
E
Sbjct: 351 NE 352
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 38/208 (18%)
Query: 263 KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNP 322
+ + +D+V LVQ D + + +L + LL AG +++ + + LL+ P
Sbjct: 218 RKEPTDDLVSALVQARDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP 274
Query: 323 EAIQKATEELDRVIGRDRWVQEKDIVNLP-YIQAIVKETMRLHPV-VPLLIPRVAREDCK 380
E + +++ P I + V+E R P+ V PR A ED
Sbjct: 275 EL-------------------RRQLLDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVT 315
Query: 381 VAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRM 440
+ G + VL + RD +PD IDV + L FG G
Sbjct: 316 LRGVTIRAGEPVLASTGAANRD-------QAQFPD---ADRIDVDRTPNQHLGFGHGVHH 365
Query: 441 CLGYGLGLKLVQSSLANLLHGFEWKLPG 468
CLG L +Q +L LL +LPG
Sbjct: 366 CLGAPLARVELQVALEVLLQ----RLPG 389
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 275 FVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 276 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 335
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 336 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 275 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 335 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 39/219 (17%)
Query: 257 ARKKSGKDQGVNDMVDVLVQF-----ADD-----PTLEVK---IERHQLKAIIQDLLTAG 303
AR+ S +Q + D + +LV+ DD T +VK I++ I LL AG
Sbjct: 181 ARQASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAG 240
Query: 304 TDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRL 363
T + ++ L ++P D+ Q K N V+E R
Sbjct: 241 NATMVNMIALGVATLAQHP----------------DQLAQLK--ANPSLAPQFVEELCRY 282
Query: 364 HPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEID 423
H L I R A+ED + + N ++ + + RD ++E P+EF +R
Sbjct: 283 HTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR------- 335
Query: 424 VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
K + L FG G C+ L + + + L F
Sbjct: 336 -KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 356 IVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD 415
V+E R H L I R A+ED + + N ++ + + RD ++E P+EF +
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGF 462
R K + L FG G C+ L + + + L F
Sbjct: 334 R--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 295 IIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQ 354
+++ LL+AG DT+ + A+ L + P +Q+ D + R+ +
Sbjct: 242 LVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRS--DPTLARNAF------------- 286
Query: 355 AIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWP 414
+E +R V RE ++ G + + +VL+ + + RDP W P+ +
Sbjct: 287 ---EEAVRFESPVQTFFRTTTRE-VELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDI 342
Query: 415 DRFIGKEIDVKGHDYELLPFGSGRRMCLG 443
R GH + FGSG MC+G
Sbjct: 343 TR------KTSGH----VGFGSGVHMCVG 361
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ CLG LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 353 IQAIVKETMR-LHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
+ +V+E +R P + +L RV D + G DL + V+ + RDP ++ P+
Sbjct: 287 VDTVVEEVLRWTSPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
F P R + I FG G CLG L
Sbjct: 345 FLPGRKPNRHIT----------FGHGMHHCLGSALA 370
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDL---LKNSRVLINIWTIG-RD 402
I + +++V E +R P V R A++D + +D +K +L + RD
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 403 PTIWEKPNEFWPDRFIGKE 421
P I+++ +EF P+RF+G+E
Sbjct: 400 PKIFDRADEFVPERFVGEE 418
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDL---LKNSRVLINIWTIG-RD 402
I + +++V E +R P V R A++D + +D +K +L + RD
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 403 PTIWEKPNEFWPDRFIGKE 421
P I+++ +EF P+RF+G+E
Sbjct: 400 PKIFDRADEFVPERFVGEE 418
>pdb|2R6A|A Chain A, Crystal Form Bh1
pdb|2R6A|B Chain B, Crystal Form Bh1
pdb|2R6E|A Chain A, Crystal Form B2
pdb|2R6E|B Chain B, Crystal Form B2
pdb|2R6C|A Chain A, Crystal Form Bh2
pdb|2R6C|B Chain B, Crystal Form Bh2
pdb|2R6C|C Chain C, Crystal Form Bh2
pdb|2R6C|D Chain D, Crystal Form Bh2
pdb|2R6C|E Chain E, Crystal Form Bh2
pdb|2R6C|F Chain F, Crystal Form Bh2
pdb|2R6D|A Chain A, Crystal Form B1
pdb|2R6D|B Chain B, Crystal Form B1
pdb|2R6D|C Chain C, Crystal Form B1
pdb|2R6D|D Chain D, Crystal Form B1
pdb|2R6D|E Chain E, Crystal Form B1
pdb|2R6D|F Chain F, Crystal Form B1
pdb|4ESV|A Chain A, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|B Chain B, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|C Chain C, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|D Chain D, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|E Chain E, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|F Chain F, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|G Chain G, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|H Chain H, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|I Chain I, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|J Chain J, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|K Chain K, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|L Chain L, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
Length = 454
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 203 TEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSG 262
+E LEE+ V ++ DA+P A ++ + K V R+L R I + Y R+
Sbjct: 77 SEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTRE--- 133
Query: 263 KDQGVNDMVDVLVQFADDPTLEVKIERH 290
D +DVL+ AD +EV +H
Sbjct: 134 ------DEIDVLLDEADRKIMEVSQRKH 155
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 272 DVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEE 331
D++ + D + + QL + + + AG +T+ + + LLL PE + ++
Sbjct: 219 DLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKD 278
Query: 332 LDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSR 391
D + A V E +R+ V + RVA ED +++G + +
Sbjct: 279 PD------------------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDG 320
Query: 392 VLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLV 451
V+ + DP ++ P + +D D + FG G C+G L +
Sbjct: 321 VIALLAGANHDPEQFDDP----------ERVDFHRTDNHHVAFGYGVHQCVGQHLARLEL 370
Query: 452 QSSLANLL 459
+ +L LL
Sbjct: 371 EVALETLL 378
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 34/155 (21%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL AG +T A + W+ LL P+ W Q++ + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPD-----------------W-QKRVAESEEAALAAFQ 259
Query: 359 ETMRLHPVVPLLIPRVAR-----EDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFW 413
E +RL+P +L R+ R ED G L+ + V ++ + + F
Sbjct: 260 EALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQRLY--------FPEGEAFQ 311
Query: 414 PDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGL 448
P+RF+ + G + PFG G+R+CLG L
Sbjct: 312 PERFLAERGTPSGRYF---PFGLGQRLCLGRDFAL 343
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 265 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 324
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ C G LG + Q + LL K+PG
Sbjct: 325 ELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 367
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L FG G+ C G LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|2X0O|A Chain A, Apo Structure Of The Alcaligin Biosynthesis Protein C
(Alcc) From Bordetella Bronchiseptica
pdb|2X0P|A Chain A, Co-Complex Structure Of Alcaligin Biosynthetase Protein C
(Alcc) With Adenosine From Bordetella Bronchiseptica
pdb|2X0Q|A Chain A, Co-Complex Structure Of Alcaligin Biosynthesis Protein C
(Alcc) With Atp From Bordetella Bronchiseptica
Length = 618
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 117 PYSPYWR-QARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLN 175
P +WR A +I + P+RLD++ LF DM SC +QL + L M+N
Sbjct: 526 PEHDFWRLVAGRIAAYQQAHPQRLDKYR-----RYDLFAPDMIHSCLNRLQLANNLQMVN 580
Query: 176 LS 177
L+
Sbjct: 581 LA 582
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 35/186 (18%)
Query: 259 KKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLL 318
++ KD G ND++ +L A P L ++ L+ G DT+ ++ + L
Sbjct: 227 ERVNKDPG-NDLISML---AHSPATRNMTPEEYLGNVLL-LIVGGNDTTRNSMTGGVLAL 281
Query: 319 LKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLL-IPRVARE 377
KNP+ K N ++ +V E +R PL + R A
Sbjct: 282 HKNPDQFAKLK------------------ANPALVETMVPEIIRWQ--TPLAHMRRTAIA 321
Query: 378 DCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSG 437
D ++ G + K +V++ ++ RD + ++P EF DR + L FG G
Sbjct: 322 DSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR---------PRPRQHLSFGFG 372
Query: 438 RRMCLG 443
C+G
Sbjct: 373 IHRCVG 378
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
+ IV+E +R V + R A D ++ G + +++N DP + +P +F
Sbjct: 322 LPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
P R + L FG+G CLG L
Sbjct: 381 DPTRPANRH----------LAFGAGSHQCLGLHLA 405
>pdb|1RA6|A Chain A, Poliovirus Polymerase Full Length Apo Structure
pdb|1RA7|A Chain A, Poliovirus Polymerase With Gtp
pdb|2ILY|A Chain A, Crystal Structure Of Poliovirus Polymerase Complexed With
Atp And Mg2+
pdb|2ILZ|A Chain A, Crystal Structure Of Poliovirus Polymerase Complexed With
Gtp And Mn2+
pdb|2IM0|A Chain A, Crystal Structure Of Poliovirus Polymerase Complexed With
Ctp And Mg2+
pdb|2IM1|A Chain A, Crystal Structure Of Poliovirus Polymerase Complexed With
Ctp And Mn2+
pdb|2IM2|A Chain A, Crystal Structure Of Poliovirus Polymerase Complexed With
Utp And Mg2+
pdb|2IM3|A Chain A, Crystal Structure Of Poliovirus Polymerase Complexed With
Utp And Mn2+
Length = 461
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 215 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 269
>pdb|1TQL|A Chain A, Poliovirus Polymerase G1a Mutant
Length = 461
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 215 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 269
>pdb|1RAJ|A Chain A, Poliovirus Polymerase With A 68 Residue N-terminal
Truncation
Length = 393
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 147 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 201
>pdb|1RDR|A Chain A, Poliovirus 3d Polymerase
Length = 461
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 215 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 269
>pdb|3OL6|A Chain A, Poliovirus Polymerase Elongation Complex
pdb|3OL6|E Chain E, Poliovirus Polymerase Elongation Complex
pdb|3OL6|I Chain I, Poliovirus Polymerase Elongation Complex
pdb|3OL6|M Chain M, Poliovirus Polymerase Elongation Complex
pdb|3OL7|A Chain A, Poliovirus Polymerase Elongation Complex With Ctp
pdb|3OL7|E Chain E, Poliovirus Polymerase Elongation Complex With Ctp
pdb|3OL7|I Chain I, Poliovirus Polymerase Elongation Complex With Ctp
pdb|3OL7|M Chain M, Poliovirus Polymerase Elongation Complex With Ctp
pdb|3OL8|A Chain A, Poliovirus Polymerase Elongation Complex With Ctp-Mn
pdb|3OL8|E Chain E, Poliovirus Polymerase Elongation Complex With Ctp-Mn
pdb|3OL8|I Chain I, Poliovirus Polymerase Elongation Complex With Ctp-Mn
pdb|3OL8|M Chain M, Poliovirus Polymerase Elongation Complex With Ctp-Mn
pdb|3OL9|A Chain A, Poliovirus Polymerase Elongation Complex With 3'-Deoxy-Ctp
pdb|3OL9|E Chain E, Poliovirus Polymerase Elongation Complex With 3'-Deoxy-Ctp
pdb|3OL9|I Chain I, Poliovirus Polymerase Elongation Complex With 3'-Deoxy-Ctp
pdb|3OL9|M Chain M, Poliovirus Polymerase Elongation Complex With 3'-Deoxy-Ctp
pdb|3OLA|A Chain A, Poliovirus Polymerase Elongation Complex With 2'-Deoxy-Ctp
pdb|3OLA|E Chain E, Poliovirus Polymerase Elongation Complex With 2'-Deoxy-Ctp
pdb|3OLA|I Chain I, Poliovirus Polymerase Elongation Complex With 2'-Deoxy-Ctp
pdb|3OLA|M Chain M, Poliovirus Polymerase Elongation Complex With 2'-Deoxy-Ctp
pdb|3OLB|A Chain A, Poliovirus Polymerase Elongation Complex With
2',3'-Dideoxy-Ctp
pdb|3OLB|E Chain E, Poliovirus Polymerase Elongation Complex With
2',3'-Dideoxy-Ctp
pdb|3OLB|I Chain I, Poliovirus Polymerase Elongation Complex With
2',3'-Dideoxy-Ctp
pdb|3OLB|M Chain M, Poliovirus Polymerase Elongation Complex With
2',3'-Dideoxy-Ctp
Length = 471
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 215 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 269
>pdb|2IJD|1 Chain 1, Crystal Structure Of The Poliovirus Precursor Protein 3cd
pdb|2IJD|2 Chain 2, Crystal Structure Of The Poliovirus Precursor Protein 3cd
Length = 644
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 398 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 452
>pdb|2IJF|A Chain A, Crystal Structure Of The Poliovirus Rna-Dependent Rna
Polymerase Fidelity Mutant 3dpol G64s
Length = 461
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 DLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR 146
DL +S P L+ K +DYTG A SP W +A K+ + ++ R+D +Y+
Sbjct: 215 DLFWSKIPVLMEEKLFAFDYTGY-DASLSPAWFEALKMVLEKIGFGDRVDYIDYLN 269
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 352 YIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
Y++AI +E +R P V + R +E K+ + + V + I + RD ++ +
Sbjct: 240 YLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
F PDR + H L FGSG +CLG L
Sbjct: 298 FIPDR------NPNPH----LSFGSGIHLCLGAPLA 323
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 352 YIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
Y++AI +E +R P V + R +E K+ + + V + I + RD ++ +
Sbjct: 240 YLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG 447
F PDR + H L FGSG +CLG L
Sbjct: 298 FIPDR------NPNPH----LSFGSGIHLCLGAPLA 323
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 32/197 (16%)
Query: 250 QILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSAL 309
I+ + A K++ +D+ L+Q +++ + ++ + +Q ++ AG +T+
Sbjct: 196 SIMTDTVAAKRAAPG---DDLTSALIQASENGD---HLTDAEIVSTLQLMVAAGHETTIS 249
Query: 310 NVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPL 369
+ A+ L +PE Q+A + G W A+V+ET+R
Sbjct: 250 LIVNAVVNLSTHPE--QRALV----LSGEAEW------------SAVVEETLRFSTPTSH 291
Query: 370 LIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDY 429
++ R A ED V + ++++ +GRD E+ + DRF H
Sbjct: 292 VLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPTADRFDLTRTSGNRH-- 345
Query: 430 ELLPFGSGRRMCLGYGL 446
+ FG G +C G L
Sbjct: 346 --ISFGHGPHVCPGAAL 360
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 78/206 (37%), Gaps = 39/206 (18%)
Query: 258 RKKSGKDQGVND-MVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMS 316
R SGK + D M+ V+V+ +I +L + + L + A + A+
Sbjct: 219 RLTSGKRRDPGDGMIGVIVR-----EHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVL 273
Query: 317 LLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAR 376
LL+ +P+ + E+ + I + +E +R +V PRVA
Sbjct: 274 LLVTHPDQMALLREKPE------------------LIDSATEEVLRHASIVEAPAPRVAL 315
Query: 377 EDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGS 436
D ++AG D+ + ++ R P DRF D+ + FG
Sbjct: 316 ADVRMAGRDIHAGDVLTCSMLATNRAPG----------DRF-----DITREKATHMAFGH 360
Query: 437 GRRMCLGYGLGLKLVQSSLANLLHGF 462
G C+G L ++ +L ++ F
Sbjct: 361 GIHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 78/206 (37%), Gaps = 39/206 (18%)
Query: 258 RKKSGKDQGVND-MVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMS 316
R SGK + D M+ V+V+ +I +L + + L + A + A+
Sbjct: 186 RLTSGKRRDPGDGMIGVIVR-----EHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVL 240
Query: 317 LLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAR 376
LL+ +P+ + E+ + I + +E +R +V PRVA
Sbjct: 241 LLVTHPDQMALLREKPE------------------LIDSATEEVLRHASIVEAPAPRVAL 282
Query: 377 EDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGS 436
D ++AG D+ + ++ R P DRF D+ + FG
Sbjct: 283 ADVRMAGRDIHAGDVLTCSMLATNRAPG----------DRF-----DITREKATHMAFGH 327
Query: 437 GRRMCLGYGLGLKLVQSSLANLLHGF 462
G C+G L ++ +L ++ F
Sbjct: 328 GIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 353 IQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF 412
I A V+E +R++ +PR+A D +V + K VL+ + DP + P
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPG 468
DR + L G G+ C G LG + Q + LL K+PG
Sbjct: 326 ELDR---------PNPTSHLAHGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 34/155 (21%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL AG +T A + W+ LL P+ W Q++ + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPD-----------------W-QKRVAESEEAALAAFQ 259
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEK---PN--EFW 413
E +RL+P +L R+ E + G D L L+ P + ++ P+ F
Sbjct: 260 EALRLYPPAWILTRRL--ERPLLLGEDRLPPGTTLVL------SPYVTQRLHFPDGEAFR 311
Query: 414 PDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGL 448
P+RF+ + G + PFG G+R+CLG L
Sbjct: 312 PERFLEERGTPSGRYF---PFGLGQRLCLGRDFAL 343
>pdb|2VYE|A Chain A, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYE|B Chain B, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYF|A Chain A, Crystal Structure Of The Dnac
pdb|2VYF|B Chain B, Crystal Structure Of The Dnac
Length = 454
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 204 EMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGK 263
E LEE+ V ++ D++P A ++ + K + R+L R I + Y R+
Sbjct: 78 EQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTRE---- 133
Query: 264 DQGVNDMVDVLVQFADDPTLEVKIERH 290
D +DVL+ A+ +EV +H
Sbjct: 134 -----DEIDVLLDEAERKIMEVSQRKH 155
>pdb|1AKM|A Chain A, Ornithine Transcarbamylase From Escherichia Coli
pdb|1AKM|B Chain B, Ornithine Transcarbamylase From Escherichia Coli
pdb|1AKM|C Chain C, Ornithine Transcarbamylase From Escherichia Coli
pdb|1DUV|G Chain G, Crystal Structure Of E. Coli Ornithine Transcarbamoylase
Complexed With Ndelta-L-Ornithine-Diaminophosphinyl-N-
Sulphonic Acid (Psorn)
pdb|1DUV|H Chain H, Crystal Structure Of E. Coli Ornithine Transcarbamoylase
Complexed With Ndelta-L-Ornithine-Diaminophosphinyl-N-
Sulphonic Acid (Psorn)
pdb|1DUV|I Chain I, Crystal Structure Of E. Coli Ornithine Transcarbamoylase
Complexed With Ndelta-L-Ornithine-Diaminophosphinyl-N-
Sulphonic Acid (Psorn)
Length = 333
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 217 DIGDAIPWLAPLDLQ-GHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLV 275
D G + +L P Q GH + +KD R L R Y+ I Y + ++V+ L
Sbjct: 68 DQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQ----------EIVETLA 117
Query: 276 QFADDPTLEVKIERHQLKAIIQDLLT 301
++A P ++ DLLT
Sbjct: 118 EYASVPVWNGLTNEFHPTQLLADLLT 143
>pdb|2VRT|A Chain A, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
Fragments - Catalytic Domain
pdb|2VRT|B Chain B, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
Fragments - Catalytic Domain
pdb|2VRT|C Chain C, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
Fragments - Catalytic Domain
pdb|2VRT|D Chain D, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
Fragments - Catalytic Domain
Length = 509
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 213 HGTLDIGDAIPWLAPLDLQGHVK-RMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMV 271
HG L + + P + H + +KDV R+ QI E K + ++
Sbjct: 65 HGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAG 124
Query: 272 DVLVQFADDP---TLEVKIE---RHQLKAIIQDL----------LTAGTDTSALNVEWAM 315
LV ++P + +IE R +LK + L TAG SA ++W +
Sbjct: 125 SYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDL 184
Query: 316 SLLLKNPEAIQKATE 330
S LK+ EAI+KA E
Sbjct: 185 SFRLKHWEAIKKAAE 199
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 59/161 (36%), Gaps = 30/161 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL G DT + ++M L K+PE Q+ E +R I A +
Sbjct: 246 LLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------------IPAACE 287
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R +V L R+ D + G L K ++L+ G D E+ N
Sbjct: 288 ELLRRFSLVAL--GRILTSDYEFHGVQLKKGDQILLPQMLSGLD----ERENA------C 335
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
+D FG G +CLG L + + +L L
Sbjct: 336 PMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 371 IPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYE 430
+ R+A ED +V G + V ++ RDP ++ P+ DR D H
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR------DPNPH--- 346
Query: 431 LLPFGSGRRMCLGYGLG---LKLVQSSLANLLHGFEWKLPGD 469
L +G+G C G L +L+ +L L G +P +
Sbjct: 347 -LAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE 387
>pdb|2VMK|A Chain A, Crystal Structure Of E. Coli Rnase E Apoprotein -
Catalytic Domain
pdb|2VMK|B Chain B, Crystal Structure Of E. Coli Rnase E Apoprotein -
Catalytic Domain
pdb|2VMK|C Chain C, Crystal Structure Of E. Coli Rnase E Apoprotein -
Catalytic Domain
pdb|2VMK|D Chain D, Crystal Structure Of E. Coli Rnase E Apoprotein -
Catalytic Domain
Length = 515
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 213 HGTLDIGDAIPWLAPLDLQGHVK-RMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMV 271
HG L + + P + H + +KDV R+ QI E K + ++
Sbjct: 65 HGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAG 124
Query: 272 DVLVQFADDP---TLEVKIE---RHQLKAIIQDL----------LTAGTDTSALNVEWAM 315
LV ++P + +IE R +LK + L TAG SA ++W +
Sbjct: 125 SYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDL 184
Query: 316 SLLLKNPEAIQKATE 330
S LK+ EAI+KA E
Sbjct: 185 SFRLKHWEAIKKAAE 199
>pdb|2BX2|L Chain L, Catalytic Domain Of E. Coli Rnase E
pdb|2C0B|L Chain L, Catalytic Domain Of E. Coli Rnase E In Complex With 13-Mer
Rna
pdb|2C4R|L Chain L, Catalytic Domain Of E. Coli Rnase E
Length = 517
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 213 HGTLDIGDAIPWLAPLDLQGHVK-RMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMV 271
HG L + + P + H + +KDV R+ QI E K + ++
Sbjct: 72 HGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAG 131
Query: 272 DVLVQFADDP---TLEVKIE---RHQLKAIIQDL----------LTAGTDTSALNVEWAM 315
LV ++P + +IE R +LK + L TAG SA ++W +
Sbjct: 132 SYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDL 191
Query: 316 SLLLKNPEAIQKATE 330
S LK+ EAI+KA E
Sbjct: 192 SFRLKHWEAIKKAAE 206
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 371 IPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYE 430
+ R+A ED +V G + V ++ RDP ++ P+ DR D H
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR------DPNPH--- 346
Query: 431 LLPFGSGRRMCLGYGLG---LKLVQSSLANLLHGFEWKLPGD 469
L +G+G C G L +L+ +L L G +P +
Sbjct: 347 -LAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE 387
>pdb|2OTC|A Chain A, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|B Chain B, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|C Chain C, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|D Chain D, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|E Chain E, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|F Chain F, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|G Chain G, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|H Chain H, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
pdb|2OTC|I Chain I, Ornithine Transcarbamoylase Complexed With N-
(Phosphonacetyl)-L-Ornithine
Length = 333
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 217 DIGDAIPWLAPLDLQ-GHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLV 275
D G + +L P Q GH + +KD R L R Y+ I Y + ++V+ L
Sbjct: 68 DQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQ----------EIVETLA 117
Query: 276 QFADDPTLEVKIERHQLKAIIQDLLT 301
++A P ++ DLLT
Sbjct: 118 EYARVPVWNGLTNEFHPTQLLADLLT 143
>pdb|1ORT|A Chain A, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|B Chain B, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|C Chain C, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|D Chain D, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|E Chain E, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|F Chain F, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|G Chain G, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|H Chain H, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|I Chain I, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|J Chain J, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|K Chain K, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
pdb|1ORT|L Chain L, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
Length = 335
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 217 DIGDAIPWLAPLDLQ-GHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLV 275
D G + ++ P Q GH + MKD R L R Y+ I G ++V+ L
Sbjct: 69 DQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAI----------GYRGFKQEIVEELA 118
Query: 276 QFADDPTLEVKIERHQLKAIIQDLLT 301
+FA P + + ++ D+LT
Sbjct: 119 KFAGVPVFNGLTDEYHPTQMLADVLT 144
>pdb|1DXH|A Chain A, Catabolic Ornithine Carbamoyltransferase From Pseudomonas
Aeruginosa
Length = 335
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 217 DIGDAIPWLAPLDLQ-GHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLV 275
D G + ++ P Q GH + MKD R L R Y+ I + + ++V+ L
Sbjct: 69 DQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQ----------EIVEELA 118
Query: 276 QFADDPTLEVKIERHQLKAIIQDLLT 301
+FA P + + ++ D+LT
Sbjct: 119 KFAGVPVFNGLTDEYHPTQMLADVLT 144
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--AAGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 233 ITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 280
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 281 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 328
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 329 ERENA------APMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 375
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 224 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 271
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 272 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 319
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 320 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 366
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 224 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 271
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 272 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 319
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 320 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 366
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 224 ITSDEAKRMCGALLLGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 271
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 272 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 319
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 320 ERENA------APMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 366
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--ANGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 30/161 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL G DT + ++M L K+PE Q+ E +R I A +
Sbjct: 246 LLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------------IPAACE 287
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R +V R+ D + G L K ++L+ G D E+ N
Sbjct: 288 ELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD----ERENA------C 335
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
+D FG G +CLG L + + +L L
Sbjct: 336 PMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 233 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 280
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 281 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 328
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 329 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 375
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 233 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 280
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 281 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 328
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 329 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 375
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 233 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 280
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 281 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 328
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 329 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 375
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1F1R|A Chain A, Crystal Structure Of Homoprotocatechuate 2,3-Dioxygenase
From Arthrobacter Globiformis (Native, Non-Cryo)
pdb|1F1R|B Chain B, Crystal Structure Of Homoprotocatechuate 2,3-Dioxygenase
From Arthrobacter Globiformis (Native, Non-Cryo)
pdb|1F1U|A Chain A, Crystal Structure Of Homoprotocatechuate 2,3-dioxygenase
From Arthrobacter Globiformis (native, Low Temperature)
pdb|1F1U|B Chain B, Crystal Structure Of Homoprotocatechuate 2,3-dioxygenase
From Arthrobacter Globiformis (native, Low Temperature)
pdb|1F1V|A Chain A, Anaerobic Substrate Complex Of Homoprotocatechuate
2,3-Dioxygenase From Arthrobacter Globiformis. (Complex
With 3,4- Dihydroxyphenylacetate)
pdb|1F1V|B Chain B, Anaerobic Substrate Complex Of Homoprotocatechuate
2,3-Dioxygenase From Arthrobacter Globiformis. (Complex
With 3,4- Dihydroxyphenylacetate)
Length = 323
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 183 VLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNR 242
VLG TEEDEN I + LEE +H L + P A VK +V+
Sbjct: 38 VLGLHVTEEDENTI-----YLRSLEE--FIHHNLVLRQG-PIAAVAAFAYRVKSPAEVD- 88
Query: 243 KLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDP---TLEVKIERHQLKAIIQ-- 297
+ +Y++ L R R+K G +G+ D V V +DP E E ++ + Q
Sbjct: 89 AAEAYYKE-LGCRTERRKEGFTKGIGDSVRV-----EDPLGFPYEFFYETEHVERLTQRY 142
Query: 298 DLLTAG 303
DL +AG
Sbjct: 143 DLYSAG 148
>pdb|1QCR|B Chain B, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1
Complex, Alpha Carbon Atoms Only
Length = 423
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG---LKLVQSSLANL-----LHGFE 463
+ PD IGK V+ HDY F S R +G G+ LK V N+ L G +
Sbjct: 161 YCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGLGLSGAK 220
Query: 464 WKL-PGDMKRQDLD-------MEERFGLTTCKKNPLVVV 494
K G+++ Q+ D + E + + + N V+
Sbjct: 221 AKYHGGEIREQNGDSLVHAALVAESAAIGSAEANAFSVL 259
>pdb|1BGY|B Chain B, Cytochrome Bc1 Complex From Bovine
pdb|1BGY|N Chain N, Cytochrome Bc1 Complex From Bovine
pdb|1BE3|B Chain B, Cytochrome Bc1 Complex From Bovine
pdb|1L0L|B Chain B, Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex
With A Bound Fungicide Famoxadone
pdb|1L0N|B Chain B, Native Structure Of Bovine Mitochondrial Cytochrome Bc1
Complex
pdb|1NTK|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1 In
Complex With Antimycin A1
pdb|1NTM|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1 Complex
At 2.4 Angstrom
pdb|1NTZ|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1 Complex
Bound With Ubiquinone
pdb|1NU1|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1
Complexed With 2- Nonyl-4-Hydroxyquinoline N-Oxide
(Nqno)
pdb|1PP9|B Chain B, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
pdb|1PP9|O Chain O, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
pdb|1PPJ|B Chain B, Bovine Cytochrome Bc1 Complex With Stigmatellin And
Antimycin
pdb|1PPJ|O Chain O, Bovine Cytochrome Bc1 Complex With Stigmatellin And
Antimycin
pdb|2A06|B Chain B, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
pdb|2A06|O Chain O, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
pdb|1SQV|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Uhdbt
pdb|1SQX|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Stigmatellin
A
pdb|1SQQ|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Methoxy
Acrylate Stilbene (Moas)
pdb|2FYU|B Chain B, Crystal Structure Of Bovine Heart Mitochondrial Bc1 With
Jg144 Inhibitor
pdb|2YBB|B Chain B, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
pdb|2YBB|BB Chain b, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
Length = 439
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG---LKLVQSSLANL-----LHGFE 463
+ PD IGK V+ HDY F S R +G G+ LK V N+ L G +
Sbjct: 177 YCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGLGLSGAK 236
Query: 464 WKL-PGDMKRQDLD-------MEERFGLTTCKKNPLVVV 494
K G+++ Q+ D + E + + + N V+
Sbjct: 237 AKYHGGEIREQNGDSLVHAALVAESAAIGSAEANAFSVL 275
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 30/173 (17%)
Query: 287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKD 346
I + K + LL G DT + ++M L K+PE Q+ E +R
Sbjct: 234 ITSDEAKRMCGLLLVTGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------ 281
Query: 347 IVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW 406
I A +E +R +V R+ D + G L K ++L+ G D
Sbjct: 282 ------IPAACEELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD---- 329
Query: 407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
E+ N +D FG G +CLG L + + +L L
Sbjct: 330 ERENA------CPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 41/152 (26%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEE-------LDRVIGRDRWVQEKDIVNLP 351
LL G + N LLL PE ++ E +D ++ RW+ ++ V L
Sbjct: 238 LLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELL---RWIPHRNAVGLS 294
Query: 352 YIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
R+A ED ++ G + V ++ RDP ++ P+
Sbjct: 295 ---------------------RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD- 332
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLG 443
ID + + FG G C G
Sbjct: 333 ---------RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 30/161 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL G DT + ++M L K+PE Q+ E +R I A +
Sbjct: 246 LLVVGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------------IPAACE 287
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R +V R+ D + G L K ++L+ G D E+ N
Sbjct: 288 ELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD----ERENA------C 335
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
+D FG G +CLG L + + +L L
Sbjct: 336 PMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 41/152 (26%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEE-------LDRVIGRDRWVQEKDIVNLP 351
LL G + N LLL PE ++ E +D ++ RW+ ++ V L
Sbjct: 238 LLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELL---RWIPHRNAVGLS 294
Query: 352 YIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
R+A ED ++ G + V ++ RDP ++ P+
Sbjct: 295 ---------------------RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD- 332
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLG 443
ID + + FG G C G
Sbjct: 333 ---------RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|1SQB|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin
pdb|1SQP|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Myxothiazol
Length = 453
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLG---LKLVQSSLANL-----LHGFE 463
+ PD IGK V+ HDY F S R +G G+ LK V N+ L G +
Sbjct: 191 YCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGLGLSGAK 250
Query: 464 WKL-PGDMKRQDLD-------MEERFGLTTCKKNPLVVV 494
K G+++ Q+ D + E + + + N V+
Sbjct: 251 AKYHGGEIREQNGDSLVHAALVAESAAIGSAEANAFSVL 289
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 41/152 (26%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEE-------LDRVIGRDRWVQEKDIVNLP 351
LL G + N LLL PE ++ E +D ++ RW+ ++ V L
Sbjct: 238 LLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELL---RWIPHRNAVGLS 294
Query: 352 YIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE 411
R+A ED ++ G + V ++ RDP ++ P+
Sbjct: 295 ---------------------RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD- 332
Query: 412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLG 443
ID + + FG G C G
Sbjct: 333 ---------RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 30/161 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL G DT + ++M L K+PE Q+ E +R I A +
Sbjct: 246 LLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------------IPAACE 287
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R +V R+ D + G L K ++L+ G D E+ N
Sbjct: 288 ELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD----ERENA------A 335
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
+D FG G +CLG L + + +L L
Sbjct: 336 PMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 376
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 30/161 (18%)
Query: 299 LLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVK 358
LL G DT + ++M L K+PE Q+ E +R I A +
Sbjct: 245 LLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPER------------------IPAACE 286
Query: 359 ETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFI 418
E +R +V R+ D + G L K ++L+ G D E+ N
Sbjct: 287 ELLRRFSLV--ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLD----ERENA------A 334
Query: 419 GKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLL 459
+D FG G +CLG L + + +L L
Sbjct: 335 PMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWL 375
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,804,544
Number of Sequences: 62578
Number of extensions: 620172
Number of successful extensions: 2111
Number of sequences better than 100.0: 233
Number of HSP's better than 100.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 1803
Number of HSP's gapped (non-prelim): 243
length of query: 506
length of database: 14,973,337
effective HSP length: 103
effective length of query: 403
effective length of database: 8,527,803
effective search space: 3436704609
effective search space used: 3436704609
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)