Query         010625
Match_columns 506
No_of_seqs    179 out of 1928
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 02:42:24 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010625.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010625hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.5E-86 3.2E-91  630.8  46.3  460   27-500    24-488 (489)
  2 PLN03112 cytochrome P450 famil 100.0 1.4E-80   3E-85  614.4  50.3  501    4-506     7-514 (514)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.6E-80 3.4E-85  614.3  48.7  476   25-505    53-539 (543)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 1.6E-80 3.5E-85  612.6  48.7  481   21-505    26-514 (517)
  5 PLN02183 ferulate 5-hydroxylas 100.0 2.9E-80 6.3E-85  610.6  47.3  470   21-500    28-512 (516)
  6 KOG0158 Cytochrome P450 CYP3/C 100.0 6.3E-81 1.4E-85  582.4  40.1  454   28-500    30-499 (499)
  7 PLN03234 cytochrome P450 83B1; 100.0 9.2E-80   2E-84  606.9  46.9  474   19-499    18-498 (499)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 1.5E-79 3.2E-84  601.8  47.9  471   25-505    27-502 (504)
  9 PTZ00404 cytochrome P450; Prov 100.0 1.8E-78 3.9E-83  595.1  45.8  460   20-499    20-482 (482)
 10 PLN02394 trans-cinnamate 4-mon 100.0 1.1E-77 2.4E-82  592.7  47.0  468   22-500    23-502 (503)
 11 PLN00168 Cytochrome P450; Prov 100.0 1.5E-77 3.2E-82  591.8  47.2  465   26-501    32-518 (519)
 12 PLN02966 cytochrome P450 83A1  100.0 3.5E-77 7.7E-82  587.3  47.5  472   19-496    19-497 (502)
 13 KOG0159 Cytochrome P450 CYP11/ 100.0 7.8E-77 1.7E-81  541.0  35.7  456   26-501    47-519 (519)
 14 PLN02655 ent-kaurene oxidase   100.0 3.3E-75 7.2E-80  567.9  43.4  457   31-502     1-466 (466)
 15 PLN02290 cytokinin trans-hydro 100.0 1.4E-75   3E-80  579.1  40.9  452   27-501    40-516 (516)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 2.3E-76 4.9E-81  574.0  34.2  453   27-501    33-497 (497)
 17 PLN03018 homomethionine N-hydr 100.0 3.4E-74 7.4E-79  564.5  48.3  472   28-505    39-529 (534)
 18 PLN02500 cytochrome P450 90B1  100.0 7.3E-75 1.6E-79  569.7  39.8  438   23-496    32-487 (490)
 19 PLN02774 brassinosteroid-6-oxi 100.0 1.3E-73 2.8E-78  556.3  37.9  430   26-496    28-461 (463)
 20 PF00067 p450:  Cytochrome P450 100.0 1.2E-74 2.5E-79  571.2  29.0  453   31-495     1-463 (463)
 21 PLN02169 fatty acid (omega-1)- 100.0 9.6E-73 2.1E-77  552.5  40.5  448   30-499    32-499 (500)
 22 PLN03195 fatty acid omega-hydr 100.0 8.9E-73 1.9E-77  558.5  40.3  451   31-500    32-516 (516)
 23 PLN02196 abscisic acid 8'-hydr 100.0 8.8E-73 1.9E-77  549.8  38.0  440   11-496    17-460 (463)
 24 PLN02738 carotene beta-ring hy 100.0   5E-72 1.1E-76  554.6  41.2  433   47-501   150-596 (633)
 25 PLN02302 ent-kaurenoic acid ox 100.0 6.8E-71 1.5E-75  544.3  42.7  440   25-501    38-489 (490)
 26 PLN02987 Cytochrome P450, fami 100.0 8.4E-71 1.8E-75  533.6  41.0  438   23-501    24-470 (472)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 3.8E-71 8.2E-76  537.8  38.7  436   25-501     3-451 (452)
 28 KOG0684 Cytochrome P450 [Secon 100.0 2.7E-71 5.8E-76  491.9  32.3  443   29-500    31-485 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 5.5E-70 1.2E-74  533.4  38.3  448   32-502    15-484 (489)
 30 PLN02426 cytochrome P450, fami 100.0 4.3E-68 9.4E-73  518.7  39.3  439   37-501    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 5.5E-61 1.2E-65  461.1  27.0  406   27-470    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 6.3E-55 1.4E-59  414.7  32.5  360   50-469    24-387 (411)
 33 PF12554 MOZART1:  Mitotic-spin  68.7      20 0.00043   22.2   4.6   44  290-333     5-48  (48)
 34 PF12508 DUF3714:  Protein of u  66.0     1.9   4E-05   36.4  -0.1   43  350-394    52-94  (200)
 35 PF12273 RCR:  Chitin synthesis  62.2       5 0.00011   31.4   1.7   33    1-33      4-36  (130)
 36 PF05952 ComX:  Bacillus compet  55.0      13 0.00028   23.9   2.2   24  314-337     5-28  (57)
 37 PF08492 SRP72:  SRP72 RNA-bind  52.2      11 0.00023   24.5   1.6    7  413-419    44-50  (59)
 38 COG0851 MinE Septum formation   50.6      26 0.00055   24.8   3.3   23  321-343    35-57  (88)
 39 KOG3506 40S ribosomal protein   48.8       8 0.00017   24.3   0.6   10  433-442    13-22  (56)
 40 PRK06789 flagellar motor switc  47.8      25 0.00054   24.2   2.9   39  357-395    22-62  (74)
 41 TIGR03779 Bac_Flav_CT_M Bacter  39.3       7 0.00015   37.0  -1.0   44  350-395   255-298 (410)
 42 PHA03162 hypothetical protein;  35.5      34 0.00074   26.2   2.3   24  435-458     2-25  (135)
 43 PRK13991 cell division topolog  33.1      92   0.002   22.3   4.0   19  321-339    35-53  (87)
 44 PF09926 DUF2158:  Uncharacteri  32.9      43 0.00094   21.3   2.1   18   61-78      3-20  (53)
 45 KOG0114 Predicted RNA-binding   32.6 2.1E+02  0.0045   21.3   6.0   60   28-89     11-76  (124)
 46 PF14483 Cut8_M:  Cut8 dimerisa  32.3      60  0.0013   19.0   2.5   19  312-330    16-35  (38)
 47 PF13893 RRM_5:  RNA recognitio  31.5 1.4E+02  0.0029   18.8   4.8   35   54-88      1-39  (56)
 48 PF14129 DUF4296:  Domain of un  30.4   2E+02  0.0044   20.4   6.0   50  287-336    29-78  (87)
 49 KOG1412 Aspartate aminotransfe  29.4 2.2E+02  0.0048   26.1   6.5   74  270-365   332-407 (410)
 50 KOG3653 Transforming growth fa  28.9 1.5E+02  0.0032   29.0   5.7   39   58-96    220-258 (534)
 51 PF09201 SRX:  SRX;  InterPro:   27.5      58  0.0013   25.4   2.4   24  439-462    18-41  (148)
 52 PF13625 Helicase_C_3:  Helicas  27.1 1.2E+02  0.0025   23.7   4.2   41   48-90     74-114 (129)
 53 COG4471 Uncharacterized protei  27.0 1.6E+02  0.0034   21.0   4.2   34   56-89     20-53  (90)
 54 PRK05933 type III secretion sy  26.8      72  0.0016   29.1   3.2   43  353-395   317-362 (372)
 55 PF12444 Sox_N:  Sox developmen  26.7      42 0.00091   23.7   1.4   21  449-469    60-80  (84)
 56 PRK13987 cell division topolog  26.4 1.3E+02  0.0029   21.7   3.9   19  321-339    33-51  (91)
 57 PRK13989 cell division topolog  25.7      50  0.0011   23.4   1.7   25  321-345    36-60  (84)
 58 PRK02302 hypothetical protein;  25.4 1.7E+02  0.0036   21.1   4.2   32   58-89     23-54  (89)
 59 PRK13990 cell division topolog  24.3      63  0.0014   23.2   2.0   26  321-346    41-66  (90)
 60 PRK13988 cell division topolog  24.3 1.8E+02  0.0038   21.4   4.3   23  320-342    36-58  (97)
 61 PRK02886 hypothetical protein;  22.9   2E+02  0.0044   20.5   4.2   32   58-89     21-52  (87)
 62 PF14824 Sirohm_synth_M:  Siroh  22.6 1.2E+02  0.0026   16.7   2.3   15  321-335    15-29  (30)
 63 PF08776 VASP_tetra:  VASP tetr  22.2 1.3E+02  0.0027   17.8   2.5   28  322-362    10-37  (40)
 64 PF15102 TMEM154:  TMEM154 prot  21.7      83  0.0018   25.0   2.3   31    3-33     65-95  (146)
 65 TIGR01215 minE cell division t  20.1 2.3E+02  0.0051   19.9   4.1   20  320-339    33-52  (81)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-86  Score=630.81  Aligned_cols=460  Identities=46%  Similarity=0.790  Sum_probs=407.6

Q ss_pred             CCCCCCCCCCCccccccccCCCC-ChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCC-ccccc
Q 010625           27 KPNLPPGPKPWPIIGNLNLIGPL-PHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQ-LLAGK  104 (506)
Q Consensus        27 ~~~~~pgp~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~-~~~~~  104 (506)
                      +.+.||||++||++||++++... ++..++++.++|||++.+++|..++|||++++.++|++++++..|++|+. .....
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            38899999999999999999776 99999999999999999999999999999999999999999999999997 33446


Q ss_pred             eeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh-CCCCccHHHHHHHHHHHHHHHHh
Q 010625          105 YLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS-CSKPVQLKDRLYMLNLSTMSRMV  183 (506)
Q Consensus       105 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~vdl~~~~~~~~~~~~~~~~  183 (506)
                      .+.+++.+++++.+|+.|+.+||.....+++...++.+.....++++.+++.+... .++++|+...+..++++++++++
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHH
Confidence            66777899999999999999999998999999999999888899999999999862 22789999999999999999999


Q ss_pred             hcccccccccCCCCChHHHHHHHHHHHHHhcccccccccc-ccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010625          184 LGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIP-WLAPLDL-QGHVKRMKDVNRKLDRFYEQILDERYARKKS  261 (506)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (506)
                      ||.++...+   ++...++..++.......+.+....++| ++.++.. .+..+.......++..++++.|+++++.. .
T Consensus       184 fG~rf~~~~---~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~  259 (489)
T KOG0156|consen  184 FGRRFEEED---EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G  259 (489)
T ss_pred             hCCccccCC---chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c
Confidence            999998753   2333568899999999988888888899 6666542 35567777777779999999999998875 2


Q ss_pred             CCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCc
Q 010625          262 GKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRW  341 (506)
Q Consensus       262 ~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  341 (506)
                      .  ++..|+++.+++...++... .++++++.+.++.+++||+|||++++.|++.+|++||++|+|+++||+++++.++.
T Consensus       260 ~--~~~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~  336 (489)
T KOG0156|consen  260 D--EEGRDFVDALLKLMKEEKAE-GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRL  336 (489)
T ss_pred             c--CCCCcHHHHHHHhhcccccC-CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence            2  22389999999987654222 29999999999999999999999999999999999999999999999999998888


Q ss_pred             cccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCCC
Q 010625          342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKE  421 (506)
Q Consensus       342 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~  421 (506)
                      ++.+|+.+||||+|||+||+|++|++|..+||.+.+|+.++||.|||||.|+++.|++||||++|+||++|+||||++.+
T Consensus       337 v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~  416 (489)
T KOG0156|consen  337 VSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN  416 (489)
T ss_pred             CChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999975


Q ss_pred             ccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeecCCCC
Q 010625          422 IDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRL  500 (506)
Q Consensus       422 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~r~  500 (506)
                       +.+.....++|||.|+|+|||..+|.+|+.+++|.|+++||+++.++    .+++.+.. .+...+.|+.+... +|.
T Consensus       417 -d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~~~~-~r~  488 (489)
T KOG0156|consen  417 -DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKAVPV-PRL  488 (489)
T ss_pred             -cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCcceeeee-cCC
Confidence             33336789999999999999999999999999999999999998766    34455554 77777778888888 764


No 2  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.4e-80  Score=614.38  Aligned_cols=501  Identities=37%  Similarity=0.701  Sum_probs=401.7

Q ss_pred             HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHH
Q 010625            4 SILLFLPVLLLFFRRHYYSRNPKKPNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVA   83 (506)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v   83 (506)
                      .++++++++.+++++.+.++++++.+.||||+++|++||++.+..+++.++.+++++||++|++++++.++++++||+.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~   86 (514)
T PLN03112          7 SLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELI   86 (514)
T ss_pred             HHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHH
Confidence            34444444555555555566667778899999999999999987788999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--C
Q 010625           84 ELLLKTHDLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--C  161 (506)
Q Consensus        84 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~  161 (506)
                      ++|+.++...|++++.........++..+.+++.+|+.|+++||.+.++.|+.++++.+.+.+.++++.+++.+.+.  .
T Consensus        87 ~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~  166 (514)
T PLN03112         87 REILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQT  166 (514)
T ss_pred             HHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhcc
Confidence            99998887788877654322222233334456677999999999975789999999999999999999999987653  4


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHH
Q 010625          162 SKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVN  241 (506)
Q Consensus       162 ~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  241 (506)
                      +.++|+.+++..+++++++.++||.++....+........+.+++..+...........++|++.++.+....++..+..
T Consensus       167 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  246 (514)
T PLN03112        167 GKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVE  246 (514)
T ss_pred             CCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHH
Confidence            56799999999999999999999998753321111122456666666554433333344566555443333346667778


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC-CCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhc
Q 010625          242 RKLDRFYEQILDERYARKKSGK-DQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLK  320 (506)
Q Consensus       242 ~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  320 (506)
                      +.+.+++.+.++++++..+... .....|+++.++++..+++ ...++++++.++++++++||+|||+++|+|++++|++
T Consensus       247 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~  325 (514)
T PLN03112        247 KRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIK  325 (514)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHh
Confidence            8888899999988776542211 2334699999998654321 2258999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhh
Q 010625          321 NPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIG  400 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~  400 (506)
                      ||++|++|++|+++++++++.++++++++||||+|||+||+|++|++++..+|.+.+|++++|+.||||+.|.++.+++|
T Consensus       326 ~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h  405 (514)
T PLN03112        326 NPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLG  405 (514)
T ss_pred             ChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhh
Confidence            99999999999999998777799999999999999999999999999987779999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcc---c-cCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCC
Q 010625          401 RDPTIWEKPNEFWPDRFIGKEID---V-KGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLD  476 (506)
Q Consensus       401 ~d~~~~~~p~~f~p~R~l~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  476 (506)
                      |||++|+||++||||||..+.+.   . ......++|||+|+|.|||++||++|+++++|.||++||+++.++...++..
T Consensus       406 ~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  485 (514)
T PLN03112        406 RNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID  485 (514)
T ss_pred             CCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence            99999999999999998754211   1 1234689999999999999999999999999999999999987653333444


Q ss_pred             cccccCceeeecCceeeeecCCCCCCCCCC
Q 010625          477 MEERFGLTTCKKNPLVVVPTKPRLPHHLYS  506 (506)
Q Consensus       477 ~~~~~~~~~~~~~~~~v~~~~~r~~~~~~~  506 (506)
                      .....+++.++++++.++++ +|...++|.
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~  514 (514)
T PLN03112        486 TQEVYGMTMPKAKPLRAVAT-PRLAPHLYG  514 (514)
T ss_pred             CccccCcccccCCCeEEEee-cCCcccccC
Confidence            44555677778889999999 999998884


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.6e-80  Score=614.31  Aligned_cols=476  Identities=31%  Similarity=0.565  Sum_probs=376.4

Q ss_pred             CCCCCCCCCCCCCccccccccCCCC--ChHHHHHHHhhhC-CeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCcc
Q 010625           25 PKKPNLPPGPKPWPIIGNLNLIGPL--PHISIHSLSRKYG-PLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLL  101 (506)
Q Consensus        25 ~~~~~~~pgp~~~p~lG~~~~~~~~--~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~  101 (506)
                      .++.+.||||+++|++||++++..+  .+.++.++.++|| ++|++++|+.++++|+||+.+++++.++...|.+++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            3456789999999999999887432  3678899999999 799999999999999999999999999888888887544


Q ss_pred             ccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHH
Q 010625          102 AGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTM  179 (506)
Q Consensus       102 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~  179 (506)
                      .....+.+..+.++..+|+.|+++||.+.++.+++..++.+.+.+.++++.+++.+...  +++++|+.+.+..++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            33333322234577778999999999996677877777788888888999998887653  3567999999999999999


Q ss_pred             HHHhhcccccccccC-CCCChHHHHHHHHHHHHHhc---cccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 010625          180 SRMVLGKRYTEEDEN-NIVTPKEFTEMLEELFLVHG---TLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDER  255 (506)
Q Consensus       180 ~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (506)
                      +.++||.++...... .+....+....+..++....   ......++|++.++...+..+...+..+.+.+++.++|+++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987432100 00011223333343333221   11223456665544222334455556778889999999888


Q ss_pred             HHHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHh
Q 010625          256 YARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRV  335 (506)
Q Consensus       256 ~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  335 (506)
                      ++..+.+......|+++.|++...+.+ ...++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||+++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v  371 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRV  371 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            765422222234799999998654321 1148999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCC
Q 010625          336 IGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPD  415 (506)
Q Consensus       336 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~  415 (506)
                      +++++.++++++.+|||++|||+||||++|+++..++|.+.+|++++||.||||+.|+++.|++||||++|+||++|+||
T Consensus       372 ~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  451 (543)
T PLN02971        372 VGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPE  451 (543)
T ss_pred             hCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcc
Confidence            98878899999999999999999999999999987889999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcc--ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceee
Q 010625          416 RFIGKEID--VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVV  493 (506)
Q Consensus       416 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  493 (506)
                      ||++++.+  ....+..++|||+|+|.|+|++||++|+++++|+|+++|+++++++.  .+.++.+.++ +...++++.|
T Consensus       452 Rfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~  528 (543)
T PLN02971        452 RHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVM  528 (543)
T ss_pred             cCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-ccccccccee
Confidence            99975432  12245689999999999999999999999999999999999987653  2455655555 5545558999


Q ss_pred             eecCCCCCCCCC
Q 010625          494 VPTKPRLPHHLY  505 (506)
Q Consensus       494 ~~~~~r~~~~~~  505 (506)
                      .++ +|-...+|
T Consensus       529 ~~~-~~~~~~~~  539 (543)
T PLN02971        529 VGE-LRLSEDLY  539 (543)
T ss_pred             eee-ecCCcccc
Confidence            999 99766666


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.6e-80  Score=612.61  Aligned_cols=481  Identities=41%  Similarity=0.790  Sum_probs=389.4

Q ss_pred             hccCCCCCCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCc
Q 010625           21 YSRNPKKPNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQL  100 (506)
Q Consensus        21 ~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~  100 (506)
                      .++++++.+.||||.++|++||++.+..+++..+.+++++||++|++++|+.++++++||+.+++++.++...|.+++..
T Consensus        26 ~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~  105 (517)
T PLN02687         26 GGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPN  105 (517)
T ss_pred             ccCCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCc
Confidence            33444455679999999999999988778999999999999999999999999999999999999999877778877654


Q ss_pred             cccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh-CCCCccHHHHHHHHHHHHH
Q 010625          101 LAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS-CSKPVQLKDRLYMLNLSTM  179 (506)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~vdl~~~~~~~~~~~~  179 (506)
                      .........+.+.+++.+|+.|+++||.+.+++|+.++++.+.+.+.++++++++.+.+. .++++|+.+++..+++|++
T Consensus       106 ~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi  185 (517)
T PLN02687        106 SGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNAL  185 (517)
T ss_pred             cchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHH
Confidence            333333333446677778999999999994489999999999999999999999999764 4568999999999999999


Q ss_pred             HHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          180 SRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARK  259 (506)
Q Consensus       180 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (506)
                      +..+||.++...+.  ......+.+.+..+............+|++.++......++..+..+.+.+++.++|+++++..
T Consensus       186 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  263 (517)
T PLN02687        186 GRAMVGRRVFAGDG--DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAG  263 (517)
T ss_pred             HHHHhCccccccCC--cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999754321  1122556666666655443322234566554443333345566677888899999998887654


Q ss_pred             hcCCCCCcCcHHHHHhcccCCC---cccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhh
Q 010625          260 KSGKDQGVNDMVDVLVQFADDP---TLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVI  336 (506)
Q Consensus       260 ~~~~~~~~~d~~~~ll~~~~~~---~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  336 (506)
                      +.+ ++...|+++.+++...+.   ..+..++++++.+++.++++||+|||+++++|++++|++||++|+++++|+++++
T Consensus       264 ~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        264 QTG-SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ccc-CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence            221 234579999999865431   1123699999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCC
Q 010625          337 GRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDR  416 (506)
Q Consensus       337 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R  416 (506)
                      +.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence            87778899999999999999999999999999877899999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc----ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCcee
Q 010625          417 FIGKEID----VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLV  492 (506)
Q Consensus       417 ~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (506)
                      |++.+..    .......++|||+|+|.|+|++||++|+++++|+||++||+++.++...++.+......++..+..++.
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLM  502 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeE
Confidence            9975321    122456899999999999999999999999999999999999976643223334445566667777899


Q ss_pred             eeecCCCCCCCCC
Q 010625          493 VVPTKPRLPHHLY  505 (506)
Q Consensus       493 v~~~~~r~~~~~~  505 (506)
                      |+++ +|.-.+-|
T Consensus       503 ~~~~-~R~~~~~~  514 (517)
T PLN02687        503 VHPR-PRLLPSAY  514 (517)
T ss_pred             Eeec-cCCChhhc
Confidence            9999 99533433


No 5  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.9e-80  Score=610.63  Aligned_cols=470  Identities=41%  Similarity=0.749  Sum_probs=377.7

Q ss_pred             hccCCCCCCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCc
Q 010625           21 YSRNPKKPNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQL  100 (506)
Q Consensus        21 ~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~  100 (506)
                      +...+++.+.||||+++|++|+++.+....+..+.+++++||++|++++++.++++|+||+++++|+.++...|+.++..
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            33444556789999999999999888666778899999999999999999999999999999999999877777777654


Q ss_pred             cccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHH
Q 010625          101 LAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMS  180 (506)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~~~~  180 (506)
                      ........++.+.+++.+|+.|+++||.+..++|+.+.++.+.+. .++++.+++.+....++++|+.+++..+++|+++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~  186 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITY  186 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHH
Confidence            332222222234567777999999999955789999999988886 4688999999975456789999999999999999


Q ss_pred             HHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010625          181 RMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKK  260 (506)
Q Consensus       181 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (506)
                      .++||.+.+...       .++.+.+..+............+|++.++.+....++..+..+.+.+++.+.|+++.++..
T Consensus       187 ~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (516)
T PLN02183        187 RAAFGSSSNEGQ-------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRK  259 (516)
T ss_pred             hHhhcCcccchH-------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999875432       5566666665554443334456676654432233556677788899999998888765442


Q ss_pred             cCC-----CCCcCcHHHHHhcccCCCc---------ccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHH
Q 010625          261 SGK-----DQGVNDMVDVLVQFADDPT---------LEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQ  326 (506)
Q Consensus       261 ~~~-----~~~~~d~~~~ll~~~~~~~---------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  326 (506)
                      .++     .....|+++.++++..+..         ....++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       260 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~  339 (516)
T PLN02183        260 NQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLK  339 (516)
T ss_pred             ccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHH
Confidence            211     1234689999998543210         01258999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCC
Q 010625          327 KATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW  406 (506)
Q Consensus       327 ~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~  406 (506)
                      |+++|++++++.++.++.+++++||||+|||+||||++|++++.. |.+.+|++++||.|||||.|.++.+++||||++|
T Consensus       340 kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~  418 (516)
T PLN02183        340 RVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSW  418 (516)
T ss_pred             HHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCcccc
Confidence            999999999986677899999999999999999999999999976 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcc-ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCcee
Q 010625          407 EKPNEFWPDRFIGKEID-VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTT  485 (506)
Q Consensus       407 ~~p~~f~p~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  485 (506)
                      +||++|+||||++++.+ .......++|||+|+|.|+|++||++|+++++|+|+++|++++.++....+.+.....+.+.
T Consensus       419 ~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  498 (516)
T PLN02183        419 EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTA  498 (516)
T ss_pred             CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccccc
Confidence            99999999999975432 12345689999999999999999999999999999999999987764322233333334454


Q ss_pred             eecCceeeeecCCCC
Q 010625          486 CKKNPLVVVPTKPRL  500 (506)
Q Consensus       486 ~~~~~~~v~~~~~r~  500 (506)
                      ++..++.+.++ +|-
T Consensus       499 ~~~~~~~~~~~-~r~  512 (516)
T PLN02183        499 PRATRLVAVPT-YRL  512 (516)
T ss_pred             ccCCCcEEEee-cCC
Confidence            55668888888 883


No 6  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.3e-81  Score=582.37  Aligned_cols=454  Identities=22%  Similarity=0.309  Sum_probs=361.5

Q ss_pred             CCCCCCCCCCccccccccCC--CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCC--Ccccc
Q 010625           28 PNLPPGPKPWPIIGNLNLIG--PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRP--QLLAG  103 (506)
Q Consensus        28 ~~~~pgp~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~--~~~~~  103 (506)
                      .+.+|||+++|++||...+.  +.......+.+.+||++|.+..+.++.++|.|||.+++|+.+...+|.++.  .....
T Consensus        30 rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~  109 (499)
T KOG0158|consen   30 RRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP  109 (499)
T ss_pred             cCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence            34789999999999999882  333555555555569999999999999999999999999999999999854  22222


Q ss_pred             ceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHhCC--CCccHHHHHHHHHHHHHHH
Q 010625          104 KYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCS--KPVQLKDRLYMLNLSTMSR  181 (506)
Q Consensus       104 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~vdl~~~~~~~~~~~~~~  181 (506)
                      ..  ......++...|+.||++|..+ +|.|+..+++++.+.+.+.++++++.+.+...  ..+++.+.+.++|.|+|++
T Consensus       110 ~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~  186 (499)
T KOG0158|consen  110 ED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS  186 (499)
T ss_pred             CC--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence            11  1122455666799999999999 89999999999999999999999999998632  4899999999999999999


Q ss_pred             HhhcccccccccCCCCChHHHHHHHHHHHHH-hccccc----cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          182 MVLGKRYTEEDENNIVTPKEFTEMLEELFLV-HGTLDI----GDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERY  256 (506)
Q Consensus       182 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (506)
                      ++||.+.+...+.    ..++.......... .....+    ...+|.+....  .......+..+-+.+.+.+.++.|.
T Consensus       187 ~AfG~~~~s~~d~----~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~  260 (499)
T KOG0158|consen  187 CAFGLDANSLRDP----KAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQRE  260 (499)
T ss_pred             hhcccchhhhcCc----hHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHH
Confidence            9999999876521    14555544444433 222111    11223222110  1112223344445555555555552


Q ss_pred             HHHhcCCCCCcCcHHHHHhcccCC---Ccccc-cccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHH
Q 010625          257 ARKKSGKDQGVNDMVDVLVQFADD---PTLEV-KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEEL  332 (506)
Q Consensus       257 ~~~~~~~~~~~~d~~~~ll~~~~~---~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  332 (506)
                      .     +...++|+++.++++..+   ..... .+|.+|++++|+.|++||.||||+++++++|+||+||++|+|||+||
T Consensus       261 ~-----~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI  335 (499)
T KOG0158|consen  261 K-----ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEI  335 (499)
T ss_pred             h-----cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            1     236789999999998853   11122 49999999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeee-eEEeCCCCEEEEehhhhhcCCCCCCCCCC
Q 010625          333 DRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA-GYDLLKNSRVLINIWTIGRDPTIWEKPNE  411 (506)
Q Consensus       333 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  411 (506)
                      ++++.+...+++|.+.+|+||++||+||||+||+++... |.+++|++++ ++.||||+.|.++++++||||++||||++
T Consensus       336 ~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~-R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~  414 (499)
T KOG0158|consen  336 DEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLN-RECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEK  414 (499)
T ss_pred             HHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccccc-ceecCceecCCCeEeCCCCEEEeecccccCCcccCCCccc
Confidence            999876555999999999999999999999999999955 9999999999 99999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCce
Q 010625          412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPL  491 (506)
Q Consensus       412 f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (506)
                      |+||||+..+.+ ..++.+|+|||.|||.|+|++||++|+|++|+.||++|+++.++..  .+.......+.++.|++++
T Consensus       415 F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t--~~~~~~~~~~~~l~pk~gi  491 (499)
T KOG0158|consen  415 FKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT--IIPLEGDPKGFTLSPKGGI  491 (499)
T ss_pred             CCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc--cCcccCCccceeeecCCce
Confidence            999999987654 4578899999999999999999999999999999999999987732  2221111237788999999


Q ss_pred             eeeecCCCC
Q 010625          492 VVVPTKPRL  500 (506)
Q Consensus       492 ~v~~~~~r~  500 (506)
                      +++++ +|+
T Consensus       492 ~Lkl~-~r~  499 (499)
T KOG0158|consen  492 WLKLE-PRD  499 (499)
T ss_pred             EEEEE-eCC
Confidence            99999 885


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=9.2e-80  Score=606.88  Aligned_cols=474  Identities=39%  Similarity=0.718  Sum_probs=382.9

Q ss_pred             hhhccCCCCCCCCCCCCCCccccccccCCC-CChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCC
Q 010625           19 HYYSRNPKKPNLPPGPKPWPIIGNLNLIGP-LPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSR   97 (506)
Q Consensus        19 ~~~~~~~~~~~~~pgp~~~p~lG~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~   97 (506)
                      ..+...+++.+.||||+++|++||++.+.. ++..++.+++++||++|++++++.++++++||+++++|+..+...|..+
T Consensus        18 ~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r   97 (499)
T PLN03234         18 FLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTAR   97 (499)
T ss_pred             HHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCC
Confidence            333444556678999999999999998854 7888999999999999999999999999999999999999887778877


Q ss_pred             CCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHH
Q 010625           98 PQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLN  175 (506)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~  175 (506)
                      +...........+..+.++..++.|+++||.+..++|++++++.+.+.+.+.++++++.+.+.  .++++|+.+++..++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t  177 (499)
T PLN03234         98 PLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFT  177 (499)
T ss_pred             CCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHH
Confidence            653322222222333445566889999999865789999999999999999999999999754  466899999999999


Q ss_pred             HHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhcccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHH
Q 010625          176 LSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLD-LQGHVKRMKDVNRKLDRFYEQILDE  254 (506)
Q Consensus       176 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  254 (506)
                      +|+++.++||.+++...    ....++.+.+...............+|++..+. ..+..++..++.+.+.+++.+.|++
T Consensus       178 ~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~  253 (499)
T PLN03234        178 NCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDE  253 (499)
T ss_pred             HHHHHHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887543    112445554444443332222333455544321 1223456778889999999999988


Q ss_pred             HHHHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhH
Q 010625          255 RYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDR  334 (506)
Q Consensus       255 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  334 (506)
                      +++....  .....|+++.+++...+.+....++++++.+++.++++||+|||+++++|++++|++||++|+++|+|+++
T Consensus       254 ~~~~~~~--~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~  331 (499)
T PLN03234        254 TLDPNRP--KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRN  331 (499)
T ss_pred             HHhhccc--CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            7654311  12457899999876543221225899999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCC-CCCCCCC
Q 010625          335 VIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW-EKPNEFW  413 (506)
Q Consensus       335 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~  413 (506)
                      ++++++.++++++++||||+|||+||+|++|++++..+|.+.+|++++||.|||||.|+++++.+||||++| +||++||
T Consensus       332 ~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~  411 (499)
T PLN03234        332 VIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFI  411 (499)
T ss_pred             HhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcC
Confidence            998777789999999999999999999999999987679999999999999999999999999999999999 8999999


Q ss_pred             CCCCCCCCcc--ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCce
Q 010625          414 PDRFIGKEID--VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPL  491 (506)
Q Consensus       414 p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (506)
                      ||||++++..  .......++|||+|+|+|+|+++|++|+++++|.|+++|++++.++..++........+++.++++++
T Consensus       412 PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (499)
T PLN03234        412 PERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHL  491 (499)
T ss_pred             chhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCe
Confidence            9999975432  22346689999999999999999999999999999999999997764334455666778888888888


Q ss_pred             eeeecCCC
Q 010625          492 VVVPTKPR  499 (506)
Q Consensus       492 ~v~~~~~r  499 (506)
                      .+.++ +|
T Consensus       492 ~~~~~-~~  498 (499)
T PLN03234        492 VLAPT-KH  498 (499)
T ss_pred             EEEee-cC
Confidence            88887 65


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.5e-79  Score=601.82  Aligned_cols=471  Identities=39%  Similarity=0.766  Sum_probs=383.9

Q ss_pred             CCCCCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccc
Q 010625           25 PKKPNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGK  104 (506)
Q Consensus        25 ~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~  104 (506)
                      .++.+.||||+++|++|+++.+..+++.++.+++++||++|++++|++++|+|+||+.+++++.++...|.+++......
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~  106 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGAT  106 (504)
T ss_pred             cccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchh
Confidence            44556799999999999998887778899999999999999999999999999999999999998777788776543222


Q ss_pred             eeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHHHHH
Q 010625          105 YLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTMSRM  182 (506)
Q Consensus       105 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~~~~  182 (506)
                      ....+..+.+++.+|+.|+++|+.+..+.|+++.++.+.+.+.++++.+++.+.+.  .|+++|+.+++..+++|+++.+
T Consensus       107 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~  186 (504)
T PLN00110        107 HLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQV  186 (504)
T ss_pred             hhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHH
Confidence            22223344667777999999999995468999999999999999999999988763  4678999999999999999999


Q ss_pred             hhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010625          183 VLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSG  262 (506)
Q Consensus       183 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (506)
                      +||.++....   .....++...+...+...........+|++.++......+...+..+.+.+++.+.++++++..+  
T Consensus       187 ~fg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  261 (504)
T PLN00110        187 ILSRRVFETK---GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH--  261 (504)
T ss_pred             HhCCcccccC---chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            9999873211   11225567766666554433333345666544332233455666778888888888888765431  


Q ss_pred             CCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCcc
Q 010625          263 KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWV  342 (506)
Q Consensus       263 ~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  342 (506)
                      ......|+++.+++...+.. +..++++++.++++++++||+|||+++++|++++|++||++|+++++|+++++++++.+
T Consensus       262 ~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  340 (504)
T PLN00110        262 ERKGNPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRL  340 (504)
T ss_pred             ccccCCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence            11234689999997643221 23699999999999999999999999999999999999999999999999999877778


Q ss_pred             ccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCCCc
Q 010625          343 QEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEI  422 (506)
Q Consensus       343 ~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~  422 (506)
                      +++++++||||+|||+||+|++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++.+.
T Consensus       341 ~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~  420 (504)
T PLN00110        341 VESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKN  420 (504)
T ss_pred             CHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCC
Confidence            99999999999999999999999999877899999999999999999999999999999999999999999999996532


Q ss_pred             cc---cCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeecCCC
Q 010625          423 DV---KGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPR  499 (506)
Q Consensus       423 ~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~r  499 (506)
                      ..   ......++|||+|+|.|+|++||++|+++++|+|+++||+++.++.   +.+......+++.|+.++.|+++ +|
T Consensus       421 ~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~r  496 (504)
T PLN00110        421 AKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVT-PR  496 (504)
T ss_pred             cccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEeec-cC
Confidence            11   1123579999999999999999999999999999999999986653   33333345678888889999999 99


Q ss_pred             CCCCCC
Q 010625          500 LPHHLY  505 (506)
Q Consensus       500 ~~~~~~  505 (506)
                      .+.+-|
T Consensus       497 ~~~~~~  502 (504)
T PLN00110        497 LHQSAY  502 (504)
T ss_pred             CCchhc
Confidence            877766


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.8e-78  Score=595.11  Aligned_cols=460  Identities=25%  Similarity=0.416  Sum_probs=363.2

Q ss_pred             hhccCCCCCCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCC
Q 010625           20 YYSRNPKKPNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQ   99 (506)
Q Consensus        20 ~~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~   99 (506)
                      +....+.+.+.+|||+++|++||++.+..+++..+.+++++||++|++++++.++++++||+.+++++.++...|..++.
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~   99 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK   99 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            33333455778999999999999999877899999999999999999999999999999999999999977666766654


Q ss_pred             ccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHH
Q 010625          100 LLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLS  177 (506)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~  177 (506)
                      ......... +.+++ +.+|+.|+++|+.+ ++.|+...++.+.+.+.+.++.+++.+.+.  .+.++|+.+++..+++|
T Consensus       100 ~~~~~~~~~-~~~l~-~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  176 (482)
T PTZ00404        100 IPSIKHGTF-YHGIV-TSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMS  176 (482)
T ss_pred             cceeeeecc-CCcee-ccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHH
Confidence            432221111 34544 45699999999999 799999999999999999999999999764  45679999999999999


Q ss_pred             HHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          178 TMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYA  257 (506)
Q Consensus       178 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (506)
                      +++.++||.+++..++...+....+.+.+..++...........++++.+.. ........+..+.+.+++.+.++++++
T Consensus       177 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  255 (482)
T PTZ00404        177 AMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLK  255 (482)
T ss_pred             HHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998864321101112445555555554333222222233332211 111223344566777777777766554


Q ss_pred             HHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhc
Q 010625          258 RKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIG  337 (506)
Q Consensus       258 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  337 (506)
                      +.   +.....|+++.++++..+.   .....+++.+++.++++||+|||+++++|++++|++||++|+||++|++++++
T Consensus       256 ~~---~~~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~  329 (482)
T PTZ00404        256 TI---DPEVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN  329 (482)
T ss_pred             cc---CCCCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc
Confidence            32   1223579999999875321   12233458899999999999999999999999999999999999999999998


Q ss_pred             CCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceee-eeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCC
Q 010625          338 RDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKV-AGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDR  416 (506)
Q Consensus       338 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R  416 (506)
                      ++..++++++++||||+|||+||||++|+++...+|.+.+|+++ +||.||||+.|.++.+++||||++|+||++|+|||
T Consensus       330 ~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeR  409 (482)
T PTZ00404        330 GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSR  409 (482)
T ss_pred             CCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccc
Confidence            76678999999999999999999999999997667999999999 99999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeec
Q 010625          417 FIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPT  496 (506)
Q Consensus       417 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  496 (506)
                      |++..     .+..++|||+|+|.|||++||++|+++++|.|+++|+++++++.   +.+.......+.. +.+++|+++
T Consensus       410 wl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~-~~~~~v~~~  480 (482)
T PTZ00404        410 FLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLK-PNKFKVLLE  480 (482)
T ss_pred             cCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeec-CCCceeeee
Confidence            99752     45689999999999999999999999999999999999986553   2333334556666 457999998


Q ss_pred             CCC
Q 010625          497 KPR  499 (506)
Q Consensus       497 ~~r  499 (506)
                       +|
T Consensus       481 -~R  482 (482)
T PTZ00404        481 -KR  482 (482)
T ss_pred             -cC
Confidence             77


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.1e-77  Score=592.67  Aligned_cols=468  Identities=31%  Similarity=0.548  Sum_probs=361.7

Q ss_pred             ccCCCCCCCCCCCCCCccccccccCCCC-ChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCc
Q 010625           22 SRNPKKPNLPPGPKPWPIIGNLNLIGPL-PHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQL  100 (506)
Q Consensus        22 ~~~~~~~~~~pgp~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~  100 (506)
                      ....++.+.||||+++|++|+++.+..+ .+..+.+++++||++|+++++++++|+|+||+.+++++.++...|.+++..
T Consensus        23 ~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         23 KLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             HHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            3344667889999999999999888654 568899999999999999999999999999999999998776677766544


Q ss_pred             cccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh---CCCCccHHHHHHHHHHH
Q 010625          101 LAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS---CSKPVQLKDRLYMLNLS  177 (506)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~vdl~~~~~~~~~~  177 (506)
                      .....+...+.+.+++.+|+.|+++||.+..++|+++.++.+.+.+.++++.+++.+.+.   .++.+|+.+++..+++|
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~d  182 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYN  182 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHH
Confidence            333333222345677777999999999985599999999999999999999999999764   23468999999999999


Q ss_pred             HHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhcc--ccccccccccccccccchHHHHHHHHHHHHH-HHHHHHHH
Q 010625          178 TMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGT--LDIGDAIPWLAPLDLQGHVKRMKDVNRKLDR-FYEQILDE  254 (506)
Q Consensus       178 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~  254 (506)
                      +++.++||.+++..+   +.....+.............  .....++|++.+.. ....+..........+ +....+++
T Consensus       183 vi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  258 (503)
T PLN02394        183 IMYRMMFDRRFESED---DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDE  258 (503)
T ss_pred             HHHHHHhCCCccccc---chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987533   11112222232222222211  11223345443221 1111222222222222 33445666


Q ss_pred             HHHHHhcC--CCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHH
Q 010625          255 RYARKKSG--KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEEL  332 (506)
Q Consensus       255 ~~~~~~~~--~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  332 (506)
                      +++..+..  +.....|+++.++++..+.    .++++++..++..+++||+|||+++++|++|+|++||++|++||+||
T Consensus       259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei  334 (503)
T PLN02394        259 RKKLMSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDEL  334 (503)
T ss_pred             HHHHhhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            65433111  1223578999999876533    58999999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCC
Q 010625          333 DRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF  412 (506)
Q Consensus       333 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f  412 (506)
                      +++++.++.++.+++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++.+++||||++|+||++|
T Consensus       335 ~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F  414 (503)
T PLN02394        335 DTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEF  414 (503)
T ss_pred             HHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCcccc
Confidence            99998767789999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcc--ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCccccc-CceeeecC
Q 010625          413 WPDRFIGKEID--VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERF-GLTTCKKN  489 (506)
Q Consensus       413 ~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~  489 (506)
                      +||||++++.+  .......++|||+|+|.|+|++||++|+++++|.|+++|++++.++.+  ..+..... .+.+..+.
T Consensus       415 ~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~  492 (503)
T PLN02394        415 RPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAK  492 (503)
T ss_pred             CccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCC
Confidence            99999975432  122456899999999999999999999999999999999999866531  23333333 24553455


Q ss_pred             ceeeeecCCCC
Q 010625          490 PLVVVPTKPRL  500 (506)
Q Consensus       490 ~~~v~~~~~r~  500 (506)
                      ++.|++. ||.
T Consensus       493 ~~~~~~~-~r~  502 (503)
T PLN02394        493 HSTVVFK-PRS  502 (503)
T ss_pred             CceEEee-cCC
Confidence            9999999 996


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.5e-77  Score=591.84  Aligned_cols=465  Identities=25%  Similarity=0.458  Sum_probs=367.1

Q ss_pred             CCCCCCCCCCCCccccccccCC---CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccc
Q 010625           26 KKPNLPPGPKPWPIIGNLNLIG---PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLA  102 (506)
Q Consensus        26 ~~~~~~pgp~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~  102 (506)
                      +..+.||||+++|++||++.+.   .+++..+.+++++||++|++++|+.++++++||+++++++.++...|+.++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3456799999999999997663   3467889999999999999999999999999999999999988788887765432


Q ss_pred             cceeeccCcceEe-CCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHH
Q 010625          103 GKYLTYDYTGMGT-APYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTM  179 (506)
Q Consensus       103 ~~~~~~~~~~~~~-~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~  179 (506)
                      ...... +.+++. ..+|+.|+++||.+.+++|++++++.+.+.+.+.++.+++.+.+.  .+..+|+.+.+..++.+++
T Consensus       112 ~~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        112 SRLLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             hhhhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            222221 122333 367999999998655899999999999999999999999999764  2346899999999999999


Q ss_pred             HHHhhcccccccccCCCCChHHHHHHHHHHHHHh-ccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          180 SRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVH-GTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYAR  258 (506)
Q Consensus       180 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (506)
                      +.++||.+++...      ...+........... ........+|++.+.......++..+..+.+.+++.++|+++++.
T Consensus       191 ~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        191 VLMCFGERLDEPA------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHHcCCCcChhh------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999875321      123333333322211 122233455654332112224555677888999999999988765


Q ss_pred             HhcC---C--C----CCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHH
Q 010625          259 KKSG---K--D----QGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKAT  329 (506)
Q Consensus       259 ~~~~---~--~----~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr  329 (506)
                      .+..   +  .    ....|+++.|++.......+..++++++.+++.++++||+|||+++++|++++|++||++|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            3110   1  0    11468999999765322112369999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhcC-CCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCC
Q 010625          330 EELDRVIGR-DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEK  408 (506)
Q Consensus       330 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~  408 (506)
                      +||++++++ .+.++.+++++||||+|||+||+|++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+|
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            999999975 3568999999999999999999999999998878999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcc-----ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCc
Q 010625          409 PNEFWPDRFIGKEID-----VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGL  483 (506)
Q Consensus       409 p~~f~p~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  483 (506)
                      |++|+||||++.+..     ....+..++|||+|+|.|||++||++|+++++|.|+++|+|++.++.   +.+.......
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~  501 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREF  501 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhcee
Confidence            999999999974211     11234689999999999999999999999999999999999987653   2233222345


Q ss_pred             eeeecCceeeeecCCCCC
Q 010625          484 TTCKKNPLVVVPTKPRLP  501 (506)
Q Consensus       484 ~~~~~~~~~v~~~~~r~~  501 (506)
                      +..++++++|+++ +|+.
T Consensus       502 ~~~~~~~~~~~~~-~R~~  518 (519)
T PLN00168        502 TTVMAKPLRARLV-PRRT  518 (519)
T ss_pred             EEeecCCcEEEEE-eccC
Confidence            6667778999999 8864


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.5e-77  Score=587.27  Aligned_cols=472  Identities=37%  Similarity=0.681  Sum_probs=367.2

Q ss_pred             hhhccCCCCCCCCCCCCCCccccccccC-CCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCC
Q 010625           19 HYYSRNPKKPNLPPGPKPWPIIGNLNLI-GPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSR   97 (506)
Q Consensus        19 ~~~~~~~~~~~~~pgp~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~   97 (506)
                      .+++..++..+.||||+++|++||++.+ ..++...+.+++++||++|++++++.++++++||+.+++|+..+...|.++
T Consensus        19 ~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~   98 (502)
T PLN02966         19 LYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADR   98 (502)
T ss_pred             HHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCC
Confidence            3444444556789999999999999988 457899999999999999999999999999999999999999877677666


Q ss_pred             CCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHH
Q 010625           98 PQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLN  175 (506)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~  175 (506)
                      +..........+..++.+..+|+.|+.+|+.+.+++|++.+++.+.+.+.+.++++++.|.+.  .++++|+.+++..++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t  178 (502)
T PLN02966         99 PPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFT  178 (502)
T ss_pred             CCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHH
Confidence            543332233233334445666999999999954899999999999999999999999999764  356799999999999


Q ss_pred             HHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhcccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHH
Q 010625          176 LSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLD-LQGHVKRMKDVNRKLDRFYEQILDE  254 (506)
Q Consensus       176 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  254 (506)
                      +|+++.++||.+++..+    +....+.+++...............+|++..+. .....+......+...+++.+.+++
T Consensus       179 ~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  254 (502)
T PLN02966        179 NSVVCRQAFGKKYNEDG----EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNE  254 (502)
T ss_pred             HHHHHHHHhCCccCccc----hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987543    112344444444443333322333455432221 1122233344566677777777776


Q ss_pred             HHHHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhH
Q 010625          255 RYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDR  334 (506)
Q Consensus       255 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  334 (506)
                      +.+...  ......|+++.+++..++...+..++++++.++++++++||+|||+.+++|++++|++||++|+++++|+++
T Consensus       255 ~~~~~~--~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  332 (502)
T PLN02966        255 TLDPKR--VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVRE  332 (502)
T ss_pred             HHhccc--cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            544321  112346899999976543211235899999999999999999999999999999999999999999999999


Q ss_pred             hhcCC--CccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCC-CCCCC
Q 010625          335 VIGRD--RWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW-EKPNE  411 (506)
Q Consensus       335 ~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~  411 (506)
                      +++++  +.++.+++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++.+++||||++| |||++
T Consensus       333 v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~  412 (502)
T PLN02966        333 YMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDE  412 (502)
T ss_pred             HhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhh
Confidence            98742  3579999999999999999999999999987779999999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCce
Q 010625          412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPL  491 (506)
Q Consensus       412 f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (506)
                      |+||||++++.+....+..++|||+|+|+|+|++||++|+++++|.|+++|+|++.++...+..+.+...+++..+..++
T Consensus       413 F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (502)
T PLN02966        413 FRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHL  492 (502)
T ss_pred             CChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCe
Confidence            99999997543322345689999999999999999999999999999999999997765333444445556555444455


Q ss_pred             eeeec
Q 010625          492 VVVPT  496 (506)
Q Consensus       492 ~v~~~  496 (506)
                      .++.+
T Consensus       493 ~~~~~  497 (502)
T PLN02966        493 KLVPE  497 (502)
T ss_pred             EEEEE
Confidence            44433


No 13 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.8e-77  Score=541.04  Aligned_cols=456  Identities=24%  Similarity=0.354  Sum_probs=386.6

Q ss_pred             CCCCCCCCCCCCccccccccC----CCCChHHHHHHHhhhCCeEEEe-ecCeeEEEecCHHHHHHHHHhCCCCCCCCC-C
Q 010625           26 KKPNLPPGPKPWPIIGNLNLI----GPLPHISIHSLSRKYGPLMHLK-FGFDSVVVGSSVEVAELLLKTHDLSFSSRP-Q   99 (506)
Q Consensus        26 ~~~~~~pgp~~~p~lG~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~-~   99 (506)
                      ++...+|||+++|++|..+.+    ..+.++...+++++|||||+.. +|+...|++.+|++++.+++.++. ++.++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            345669999999999998844    4678899999999999999999 888999999999999999997653 34553 1


Q ss_pred             ccc---cceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHhC-----CCCccHHHHH
Q 010625          100 LLA---GKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSC-----SKPVQLKDRL  171 (506)
Q Consensus       100 ~~~---~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~-----~~~vdl~~~~  171 (506)
                      ...   .... +++...++..+|+.|++.|..++...++++.++.|.+.++..+++++..++...     ..+.|+.+.+
T Consensus       126 ~~~w~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l  204 (519)
T KOG0159|consen  126 IEPWVAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQEL  204 (519)
T ss_pred             cchhhhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence            111   1111 223334555569999999999988889999999999999999999999998762     2468999999


Q ss_pred             HHHHHHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHH
Q 010625          172 YMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQI  251 (506)
Q Consensus       172 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (506)
                      ++++++.+|.++||.+++...++.++..+.+.+++..++.....+.   +.|-++++.+.+.+++..++.+.+.+++.+.
T Consensus       205 ~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~  281 (519)
T KOG0159|consen  205 YRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYFPTKVWKDFVRAWDQIFDVGDKY  281 (519)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999887777778888899888887665533   3444444334566899999999999999999


Q ss_pred             HHHHHHHHhcCCCC--CcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHH
Q 010625          252 LDERYARKKSGKDQ--GVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKAT  329 (506)
Q Consensus       252 i~~~~~~~~~~~~~--~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr  329 (506)
                      |+++.++.+.++..  +..+.+-.++..       ..++.+++..+++.++.||+|||+.++.|+||+|++||++|++|+
T Consensus       282 Id~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  282 IDNALEELEKQDSAGSEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHHHhccccccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            99999888655432  333344444432       168899999999999999999999999999999999999999999


Q ss_pred             HHHhHhhcC-CCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCC
Q 010625          330 EELDRVIGR-DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEK  408 (506)
Q Consensus       330 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~  408 (506)
                      +|+.+++++ +..++.+++.+||||.||||||+||||.+++.. |...+|.+++||.|||||.|.++++.+.+||++|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999987 688999999999999999999999999999988 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeec
Q 010625          409 PNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK  488 (506)
Q Consensus       409 p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (506)
                      |++|+|||||+++. ...++..++|||.|+|+|+||++|++|+.++||+|+++|+++..++.   +  ......+++.|.
T Consensus       434 p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~---p--v~~~~~~il~P~  507 (519)
T KOG0159|consen  434 PEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE---P--VEYVYRFILVPN  507 (519)
T ss_pred             ccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC---C--ccceeEEEEcCC
Confidence            99999999998863 24578999999999999999999999999999999999999997652   3  445577788888


Q ss_pred             CceeeeecCCCCC
Q 010625          489 NPLVVVPTKPRLP  501 (506)
Q Consensus       489 ~~~~v~~~~~r~~  501 (506)
                      .++..+++ +|+.
T Consensus       508 ~~l~f~f~-~r~~  519 (519)
T KOG0159|consen  508 RPLRFKFR-PRNE  519 (519)
T ss_pred             CCcceeee-eCCC
Confidence            99999999 8863


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=3.3e-75  Score=567.88  Aligned_cols=457  Identities=27%  Similarity=0.435  Sum_probs=364.9

Q ss_pred             CCCCCCCccccccccCC-CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccceeecc
Q 010625           31 PPGPKPWPIIGNLNLIG-PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGKYLTYD  109 (506)
Q Consensus        31 ~pgp~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~~~~~~  109 (506)
                      ||||+++|++||++++. .+++..+.+++++||++|++++++.++++|+||+.+++++.++...|++++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999999985 55889999999999999999999999999999999999999888888777543332222222


Q ss_pred             CcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh----CCCCccHHHHHHHHHHHHHHHHhhc
Q 010625          110 YTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS----CSKPVQLKDRLYMLNLSTMSRMVLG  185 (506)
Q Consensus       110 ~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~----~~~~vdl~~~~~~~~~~~~~~~~fG  185 (506)
                      +..+....+|+.|+++||.+.+++|+...++.+.+.+.+.++.+++.+...    .++++|+.+++..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            223445556999999999876788998888889998888888888887643    3567999999999999999999999


Q ss_pred             ccccccccCC-CCC---hHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010625          186 KRYTEEDENN-IVT---PKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKS  261 (506)
Q Consensus       186 ~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (506)
                      .+++...... ...   ...+...+..+............+|++++++.....+...+....+.+++.+++++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9877532110 000   022333344444333322333456655544322223334444455667888888877765422


Q ss_pred             CCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCc
Q 010625          262 GKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRW  341 (506)
Q Consensus       262 ~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  341 (506)
                      +  ....|+++.+++...      .++++++.++++++++||+|||+++|+|++++|++||++|+++|+|++++++.+. 
T Consensus       241 ~--~~~~d~l~~ll~~~~------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-  311 (466)
T PLN02655        241 G--EERDCYLDFLLSEAT------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-  311 (466)
T ss_pred             C--CCcccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-
Confidence            2  234689999997632      5899999999999999999999999999999999999999999999999998654 


Q ss_pred             cccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCCC
Q 010625          342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKE  421 (506)
Q Consensus       342 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~  421 (506)
                      ++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.+
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~  391 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEK  391 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCC
Confidence            89999999999999999999999999998789999999999999999999999999999999999999999999999754


Q ss_pred             ccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeecCCCCC
Q 010625          422 IDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRLP  501 (506)
Q Consensus       422 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~r~~  501 (506)
                      .. ......++|||+|+|.|||++||++|+++++++||++|++++.++.. ..   ....+++..+++++.|+++ +|.+
T Consensus       392 ~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~-~r~~  465 (466)
T PLN02655        392 YE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPLHAHLK-PRGS  465 (466)
T ss_pred             cc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cc---cchhheeEeecCCcEEEEe-ecCC
Confidence            32 12346899999999999999999999999999999999999866532 11   2235667778889999999 8875


Q ss_pred             C
Q 010625          502 H  502 (506)
Q Consensus       502 ~  502 (506)
                      +
T Consensus       466 ~  466 (466)
T PLN02655        466 M  466 (466)
T ss_pred             C
Confidence            3


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.4e-75  Score=579.12  Aligned_cols=452  Identities=21%  Similarity=0.333  Sum_probs=357.0

Q ss_pred             CCCCCCCCCCCccccccccCC-------------------CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHH
Q 010625           27 KPNLPPGPKPWPIIGNLNLIG-------------------PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLL   87 (506)
Q Consensus        27 ~~~~~pgp~~~p~lG~~~~~~-------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~   87 (506)
                      ..+.||||+++|++||++++.                   .+....+.+|+++||++|++++|+.++++++||+.+++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            445689999999999998763                   2233456889999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CC-CC
Q 010625           88 KTHDLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CS-KP  164 (506)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~-~~  164 (506)
                      .++ ..+..++...........+.++++ .+|+.|+++||.+ .+.|+..+++.+.+.+.++++.+++.+.+.  .+ .+
T Consensus       120 ~~~-~~~~~r~~~~~~~~~~~~g~~l~~-~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKY-NTVTGKSWLQQQGTKHFIGRGLLM-ANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcC-CCCCCCcchhhhHHHHHhcCCccc-cCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            976 334444421111111111345544 4699999999998 799999999999999999999999999764  23 47


Q ss_pred             ccHHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHH
Q 010625          165 VQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKL  244 (506)
Q Consensus       165 vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~  244 (506)
                      +|+.+++..+++|+++.++||.+++..        .++...+..+............+|++..++ .+..+...+..+.+
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~  267 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKG--------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEV  267 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccc--------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHH
Confidence            999999999999999999999987532        233333333332221111112344443332 22345566677889


Q ss_pred             HHHHHHHHHHHHHHHhcCC-CCCcCcHHHHHhcccCCC-cccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCH
Q 010625          245 DRFYEQILDERYARKKSGK-DQGVNDMVDVLVQFADDP-TLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNP  322 (506)
Q Consensus       245 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  322 (506)
                      .+++.+.|+++++..+.+. .+...|+++.++++..+. ..+..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       268 ~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P  347 (516)
T PLN02290        268 ERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNP  347 (516)
T ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCH
Confidence            9999999998876553221 223579999999765322 11224889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcC
Q 010625          323 EAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRD  402 (506)
Q Consensus       323 ~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d  402 (506)
                      ++|+++|+|++++++.+ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.||+||.|+++.+++|||
T Consensus       348 ~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd  425 (516)
T PLN02290        348 TWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHS  425 (516)
T ss_pred             HHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCC
Confidence            99999999999999864 78999999999999999999999999986 57999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCccccc
Q 010625          403 PTIW-EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERF  481 (506)
Q Consensus       403 ~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  481 (506)
                      |++| +||++||||||++.+.   .....++|||.|+|.|+|++||++|++++++.|+++||+++.++..     .....
T Consensus       426 p~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~~  497 (516)
T PLN02290        426 EELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPVV  497 (516)
T ss_pred             hhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCccc
Confidence            9999 8999999999995421   2345799999999999999999999999999999999999866531     11123


Q ss_pred             CceeeecCceeeeecCCCCC
Q 010625          482 GLTTCKKNPLVVVPTKPRLP  501 (506)
Q Consensus       482 ~~~~~~~~~~~v~~~~~r~~  501 (506)
                      ..+..|+++++|+++ +|++
T Consensus       498 ~~~~~p~~~~~~~~~-~~~~  516 (516)
T PLN02290        498 VLTIKPKYGVQVCLK-PLNP  516 (516)
T ss_pred             eeeecCCCCCeEEEE-eCCC
Confidence            578889999999999 9874


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.3e-76  Score=573.98  Aligned_cols=453  Identities=27%  Similarity=0.445  Sum_probs=367.0

Q ss_pred             CCCCCCCCCCCccccccccCCC---CChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCcc-c
Q 010625           27 KPNLPPGPKPWPIIGNLNLIGP---LPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLL-A  102 (506)
Q Consensus        27 ~~~~~pgp~~~p~lG~~~~~~~---~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~-~  102 (506)
                      +...+|||+++|++|++.++.+   +...++.++..+||++|+.+++|.++++++||+.+++|+.++.......+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5567899999999999999843   56788899999999999999999999999999999999976555454444333 2


Q ss_pred             cceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh-CCCCccHHHHHHHHHHHHHHH
Q 010625          103 GKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS-CSKPVQLKDRLYMLNLSTMSR  181 (506)
Q Consensus       103 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~vdl~~~~~~~~~~~~~~  181 (506)
                      ...+.  |.|++++. |+.|+++||.+ .++|+.+.++.+...+.+....+...+... .+..+|+.+.+.++++|++|.
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            22222  45777777 99999999998 799999999999999999999888877765 333499999999999999999


Q ss_pred             HhhcccccccccCCCCChHHHHHHHHHHHHHhcccccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010625          182 MVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIP-WLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKK  260 (506)
Q Consensus       182 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (506)
                      ++||.......   .+...++.+++..+......   ....| +..++...+..++..++.+.+.++++++|+++++..+
T Consensus       189 ~~~G~~~~~~~---~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~  262 (497)
T KOG0157|consen  189 TAMGPESLDAE---GPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELE  262 (497)
T ss_pred             HhcCCcccccc---CCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99992221111   11224556666554443332   23344 3333333335788889999999999999999998764


Q ss_pred             cCCC---CCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhc
Q 010625          261 SGKD---QGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIG  337 (506)
Q Consensus       261 ~~~~---~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  337 (506)
                      +++.   ....|+++.+.....     ..++++++.+++.+|++||+|||+.+++|+++.|+.||++|+++++|++++++
T Consensus       263 ~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~  337 (497)
T KOG0157|consen  263 KEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILG  337 (497)
T ss_pred             hcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhC
Confidence            3332   346788885333222     27999999999999999999999999999999999999999999999999997


Q ss_pred             CC-CccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeee-eEEeCCCCEEEEehhhhhcCCCCCC-CCCCCCC
Q 010625          338 RD-RWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA-GYDLLKNSRVLINIWTIGRDPTIWE-KPNEFWP  414 (506)
Q Consensus       338 ~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~f~p  414 (506)
                      +. ..++....++|+||++||+|||||||++|... |.+.+|+.++ ||.||||+.|+++.+++|||+++|+ ||++|||
T Consensus       338 ~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~P  416 (497)
T KOG0157|consen  338 NRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDP  416 (497)
T ss_pred             CCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCc
Confidence            43 32333334479999999999999999999987 9999999995 8999999999999999999999995 9999999


Q ss_pred             CCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeee
Q 010625          415 DRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVV  494 (506)
Q Consensus       415 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  494 (506)
                      |||++++.....++++|+|||+|+|.|+|++||++|+|++++.|+++|++++..+..     .......+++++++++|+
T Consensus       417 eRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~  491 (497)
T KOG0157|consen  417 ERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVK  491 (497)
T ss_pred             cccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEE
Confidence            999976444355679999999999999999999999999999999999999877631     344578899999999999


Q ss_pred             ecCCCCC
Q 010625          495 PTKPRLP  501 (506)
Q Consensus       495 ~~~~r~~  501 (506)
                      ++ +|..
T Consensus       492 ~~-~r~~  497 (497)
T KOG0157|consen  492 LR-PRGS  497 (497)
T ss_pred             EE-eCCC
Confidence            99 9863


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.4e-74  Score=564.48  Aligned_cols=472  Identities=29%  Similarity=0.494  Sum_probs=356.8

Q ss_pred             CCCCCCCCCCccccccccCCC-CC-hHHHHHHHhhh-CCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccc
Q 010625           28 PNLPPGPKPWPIIGNLNLIGP-LP-HISIHSLSRKY-GPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGK  104 (506)
Q Consensus        28 ~~~~pgp~~~p~lG~~~~~~~-~~-~~~~~~~~~ky-G~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~  104 (506)
                      .+.||||+++|++||++++.. .+ ..++.+..++| |++|++++|++++|+|+||+.+++++.++...|++++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            346999999999999998732 23 24566777776 7999999999999999999999999998877788877544333


Q ss_pred             eeeccCcceEeCCCChHHHHHHhHHHhhcC-ChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHHHH
Q 010625          105 YLTYDYTGMGTAPYSPYWRQARKICVMELL-SPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTMSR  181 (506)
Q Consensus       105 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~~~  181 (506)
                      ....++.++.+..+|+.|+++||.+ ++.| +......+.+....+++++++.+.+.  .+.++|+.+++..+++|+++.
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            3332233567776799999999999 5655 44444455566667788999988753  356799999999999999999


Q ss_pred             HhhcccccccccC---CCCChHHHHHHHHHHHHHhc---ccccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 010625          182 MVLGKRYTEEDEN---NIVTPKEFTEMLEELFLVHG---TLDIGDAIP-WLAPLDLQGHVKRMKDVNRKLDRFYEQILDE  254 (506)
Q Consensus       182 ~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  254 (506)
                      ++||.++......   .......+...+..+.....   .......+| |+.++...+...+.....+.+.++++++|++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998542210   01111212222222222111   111112233 4443221222344555667788889999988


Q ss_pred             HHHHHhcC-CCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHh
Q 010625          255 RYARKKSG-KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELD  333 (506)
Q Consensus       255 ~~~~~~~~-~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  333 (506)
                      +++...+. +.....|+++.++++..+.+ ...++++++.+++.++++||+|||+++++|++++|+.||++|+++++||+
T Consensus       278 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  356 (534)
T PLN03018        278 RVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELD  356 (534)
T ss_pred             HHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            87653221 11234689999997654321 11389999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCC
Q 010625          334 RVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFW  413 (506)
Q Consensus       334 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  413 (506)
                      ++++.++.++.+++.+||||+|||+||||++|+++...+|++.+|++++||.||||+.|+++.+++||||++|+||++|+
T Consensus       357 ~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~  436 (534)
T PLN03018        357 EVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYE  436 (534)
T ss_pred             HHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccC
Confidence            99987778899999999999999999999999999887799999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccc-----cCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeec
Q 010625          414 PDRFIGKEIDV-----KGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKK  488 (506)
Q Consensus       414 p~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (506)
                      ||||++.+++.     ......++|||+|+|.|||++||++|+++++|+|+++|++++.++.  .+.+.....+++.. +
T Consensus       437 PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~-p  513 (534)
T PLN03018        437 PERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM-A  513 (534)
T ss_pred             CccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceec-C
Confidence            99999754321     1244689999999999999999999999999999999999986553  12223222344444 4


Q ss_pred             CceeeeecCCCCCCCCC
Q 010625          489 NPLVVVPTKPRLPHHLY  505 (506)
Q Consensus       489 ~~~~v~~~~~r~~~~~~  505 (506)
                      .+++|+++ +|....+|
T Consensus       514 ~~~~v~~~-~R~~~~~~  529 (534)
T PLN03018        514 KPLLLSVE-PRLAPNLY  529 (534)
T ss_pred             CCeEEEEE-eccccccc
Confidence            59999999 99544443


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.3e-75  Score=569.69  Aligned_cols=438  Identities=20%  Similarity=0.304  Sum_probs=341.7

Q ss_pred             cCCCCCCCCCCCCCCccccccccCC-----CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCC
Q 010625           23 RNPKKPNLPPGPKPWPIIGNLNLIG-----PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSR   97 (506)
Q Consensus        23 ~~~~~~~~~pgp~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~   97 (506)
                      ..+++.+.||||+++|++||++.+.     +.++.++.+++++||++|+++++++++|+++||+++++++.+++..|..+
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            3445567899999999999986542     35677899999999999999999999999999999999999876666533


Q ss_pred             CCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhh-hHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHH
Q 010625           98 PQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQ-FEYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLNL  176 (506)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~  176 (506)
                      .........  ++.+++.. +|+.|+++|+.+ .+.|++..++. +.+.+.+.+..+++.+..  +.++|+.+.+..+++
T Consensus       112 ~~~~~~~~~--g~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~  185 (490)
T PLN02500        112 YPRSIGGIL--GKWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTF  185 (490)
T ss_pred             CchHHHHHh--Cccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHH
Confidence            221111111  22244444 699999999999 69999999887 467777888888887753  457999999999999


Q ss_pred             HHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          177 STMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERY  256 (506)
Q Consensus       177 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (506)
                      +++++++||.+.+...      ...+...+.........  ....+|+.       ..++..+..+.+.+++.+.+++++
T Consensus       186 ~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~  250 (490)
T PLN02500        186 NLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERI  250 (490)
T ss_pred             HHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998754321      13333333333221110  00112221       134555677889999999998887


Q ss_pred             HHHhcCC-CCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHh
Q 010625          257 ARKKSGK-DQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRV  335 (506)
Q Consensus       257 ~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  335 (506)
                      +..+.++ .....|+++.+++..       .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       251 ~~~~~~~~~~~~~d~l~~ll~~~-------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v  323 (490)
T PLN02500        251 EKLKEEDESVEEDDLLGWVLKHS-------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEI  323 (490)
T ss_pred             HhhhcccCCCCcchHHHHHHhcc-------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence            6542222 123468999999741       58999999999999999999999999999999999999999999999998


Q ss_pred             hc-----CCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCC
Q 010625          336 IG-----RDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPN  410 (506)
Q Consensus       336 ~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  410 (506)
                      ++     .++.++++++++||||+|||+||+|++|+++.. +|.+.+|++++||.||||+.|+++.+++||||++|+||+
T Consensus       324 ~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~  402 (490)
T PLN02500        324 ARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQ  402 (490)
T ss_pred             hhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCcc
Confidence            74     234589999999999999999999999999986 599999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccc------CCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCce
Q 010625          411 EFWPDRFIGKEIDVK------GHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLT  484 (506)
Q Consensus       411 ~f~p~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  484 (506)
                      +|+||||++++.+..      ..+..++|||+|+|.|+|+++|++|+++++|.|+++|++++.++..  .  ..  ...+
T Consensus       403 ~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~--~~--~~~~  476 (490)
T PLN02500        403 LFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--A--FA--FPFV  476 (490)
T ss_pred             ccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--c--ee--cccc
Confidence            999999997542211      2456899999999999999999999999999999999999866531  1  11  1122


Q ss_pred             eeecCceeeeec
Q 010625          485 TCKKNPLVVVPT  496 (506)
Q Consensus       485 ~~~~~~~~v~~~  496 (506)
                       .+++++.|+++
T Consensus       477 -~~~~~l~~~~~  487 (490)
T PLN02500        477 -DFPKGLPIRVR  487 (490)
T ss_pred             -cCCCCceEEEE
Confidence             33458888876


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.3e-73  Score=556.28  Aligned_cols=430  Identities=20%  Similarity=0.274  Sum_probs=341.7

Q ss_pred             CCCCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccce
Q 010625           26 KKPNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGKY  105 (506)
Q Consensus        26 ~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~~  105 (506)
                      ++.+.||||+++|++||++.+..++..++++++++||++|+++++++++++++||+.+++++.++...+...........
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  107 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI  107 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH
Confidence            34457899999999999988877778899999999999999999999999999999999999876665533322211111


Q ss_pred             eeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhh-hHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHhh
Q 010625          106 LTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQ-FEYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMSRMVL  184 (506)
Q Consensus       106 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~~~~~~~f  184 (506)
                        .++.+++ +.+|+.|+++|+.+ .+.|++..++. +.+.+.+.++++++.|..  ++++|+.+.+..+++++++.++|
T Consensus       108 --lg~~~~~-~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~  181 (463)
T PLN02774        108 --LGTCNIA-AVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQIA  181 (463)
T ss_pred             --hCccchh-hcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHHc
Confidence              2222344 45699999999999 68999999886 688888888888888753  46799999999999999999999


Q ss_pred             cccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010625          185 GKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKD  264 (506)
Q Consensus       185 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (506)
                      |.+.....       .++...+..+   ....   ..+|..  + +....++..++.+.+.+++.+.|+++++..     
T Consensus       182 g~~~~~~~-------~~~~~~~~~~---~~~~---~~~~~~--l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----  240 (463)
T PLN02774        182 GTLSKPIS-------EEFKTEFFKL---VLGT---LSLPID--L-PGTNYRSGVQARKNIVRMLRQLIQERRASG-----  240 (463)
T ss_pred             CCCChHHH-------HHHHHHHHHH---hccc---ccCCcC--C-CChhhhHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            97653221       2233222222   1110   112211  1 111234556778888999999998876432     


Q ss_pred             CCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcC---CCc
Q 010625          265 QGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGR---DRW  341 (506)
Q Consensus       265 ~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~  341 (506)
                      ...+|+++.+++...+   +..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.   ++.
T Consensus       241 ~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~  317 (463)
T PLN02774        241 ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDP  317 (463)
T ss_pred             CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCC
Confidence            3357999999974332   2258999999999999999999999999999999999999999999999999863   356


Q ss_pred             cccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCCC
Q 010625          342 VQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKE  421 (506)
Q Consensus       342 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~  421 (506)
                      ++++++++||||+|||+||||++|+++... |.+.+|++++||.||||+.|+++.+.+||||++|+||++|+||||++.+
T Consensus       318 ~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~-R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~  396 (463)
T PLN02774        318 IDWNDYKSMRFTRAVIFETSRLATIVNGVL-RKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKS  396 (463)
T ss_pred             CCHHHHhcCcHHHHHHHHHHhcCCCCCCcc-cccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCC
Confidence            889999999999999999999999998654 9999999999999999999999999999999999999999999999654


Q ss_pred             ccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeec
Q 010625          422 IDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPT  496 (506)
Q Consensus       422 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  496 (506)
                      ..   ....++|||+|+|.|||+++|++|+++++|.|+++|++++.++..  ...     ..++.|++++.|+++
T Consensus       397 ~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~--~~~-----~~~~~p~~g~~~~~~  461 (463)
T PLN02774        397 LE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK--LMK-----FPRVEAPNGLHIRVS  461 (463)
T ss_pred             cC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc--ccc-----CCCCCCCCCceEEee
Confidence            21   123699999999999999999999999999999999999976631  111     123446789999887


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.2e-74  Score=571.17  Aligned_cols=453  Identities=32%  Similarity=0.547  Sum_probs=368.6

Q ss_pred             CCCCCCCccccccccCC--CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccce--e
Q 010625           31 PPGPKPWPIIGNLNLIG--PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGKY--L  106 (506)
Q Consensus        31 ~pgp~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~~--~  106 (506)
                      ||||+++|++||++++.  ++++..+.+++++||++|+++++++++++|+||+.+++|+..+...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  6788999999999999999999999999999999999999988766665533222221  1


Q ss_pred             eccCcceEeCCCChHHHHHHhHHHhhcCChH-HHhhhHHHHHHHHHHHHHHHHHhCCC--CccHHHHHHHHHHHHHHHHh
Q 010625          107 TYDYTGMGTAPYSPYWRQARKICVMELLSPK-RLDQFEYMRVEERKLFLHDMFKSCSK--PVQLKDRLYMLNLSTMSRMV  183 (506)
Q Consensus       107 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~--~vdl~~~~~~~~~~~~~~~~  183 (506)
                      ...+.++.+.. |+.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++.+++.+....+.  ++|+.++++.+++|+++.++
T Consensus        81 ~~~~~~l~~~~-~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGLFFSD-GERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSSTTSS-HHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc-ccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            22344554444 79999999999 6888888 66 89999999999999999987433  59999999999999999999


Q ss_pred             hcccccccccCCCCChHHHHHHHHHHHHHhcc--ccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010625          184 LGKRYTEEDENNIVTPKEFTEMLEELFLVHGT--LDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKS  261 (506)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (506)
                      ||.+++..+.   +...++.+.+..+......  ......+||+.+++ ....+...+..+.+.+++.+.++++++..+.
T Consensus       158 fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  158 FGKDFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccceeeeccc---ccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence            9999874331   1113455666666544322  12334566555543 3446677778899999999999999887733


Q ss_pred             CCCCCcCcHHHHHhccc-CCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCC
Q 010625          262 GKDQGVNDMVDVLVQFA-DDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDR  340 (506)
Q Consensus       262 ~~~~~~~d~~~~ll~~~-~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  340 (506)
                      + .....|+++.+++.. ..++ +..++++++.++++.+++||+|||+.+++|++++|++||++|++|++||++++++++
T Consensus       234 ~-~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  234 G-DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             S-SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             c-cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3 346789999999986 3321 137999999999999999999999999999999999999999999999999997777


Q ss_pred             ccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCC
Q 010625          341 WVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGK  420 (506)
Q Consensus       341 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~  420 (506)
                      .++.+++++||||+|||+||+|++|+++..++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++.
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999996677999999999999999999999999999999999999999999999988


Q ss_pred             CccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeee
Q 010625          421 EIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVP  495 (506)
Q Consensus       421 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  495 (506)
                      +......+..++|||.|+|.|||++||++|+++++|+||++|||+++++..  ..+.....+++.+| .++.|.+
T Consensus       392 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~  463 (463)
T PF00067_consen  392 RGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSE--PEPQEQQNGFLLPP-KPLKVKF  463 (463)
T ss_dssp             TSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSS--GGEEECSCSSSEEE-SSSEEEE
T ss_pred             ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCC--CCCccccCceEeeC-CCcEEeC
Confidence            653345778999999999999999999999999999999999999976642  22222222444444 4787764


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=9.6e-73  Score=552.51  Aligned_cols=448  Identities=18%  Similarity=0.253  Sum_probs=341.7

Q ss_pred             CCCCCCCCccccccccCCCC---ChHHHHHHHhhhCCeEE---EeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCcccc
Q 010625           30 LPPGPKPWPIIGNLNLIGPL---PHISIHSLSRKYGPLMH---LKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAG  103 (506)
Q Consensus        30 ~~pgp~~~p~lG~~~~~~~~---~~~~~~~~~~kyG~v~~---~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~  103 (506)
                      ..|||+++|++||+..+..+   ..+++.+..++||..++   .++|+.++++|+||+.+++|+.++...|.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            46899999999999777322   23444444455886655   5678899999999999999999876666665432211


Q ss_pred             ceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhh--HHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHH
Q 010625          104 KYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQF--EYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTM  179 (506)
Q Consensus       104 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~--~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~  179 (506)
                      .  ...+.|++++. |+.|+++||.+ +|+|+...+..+  .+.+.+.++.+++.+.+.  .+.++|+.+.+.++++|++
T Consensus       112 ~--~~~g~gl~~~~-g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        112 F--DVLGEGILTVD-FELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             H--HhhcCcccccC-cHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            1  11245666654 99999999999 799999887643  466777778888887653  4568999999999999999


Q ss_pred             HHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccc----cccccchHHHHHHHHHHHHHHHHHHHHHH
Q 010625          180 SRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLA----PLDLQGHVKRMKDVNRKLDRFYEQILDER  255 (506)
Q Consensus       180 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (506)
                      +.++||.+.+.....  ....++..++........   ...+.|++.    .+.+.+..++..+..+.+.+++.++|+++
T Consensus       188 ~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r  262 (500)
T PLN02169        188 SILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSR  262 (500)
T ss_pred             HhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999987643211  111345444444332211   112234321    11112335667888999999999999988


Q ss_pred             HHHHhcC--CCCCcCcHHHHHhcccCCC-cccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHH
Q 010625          256 YARKKSG--KDQGVNDMVDVLVQFADDP-TLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEEL  332 (506)
Q Consensus       256 ~~~~~~~--~~~~~~d~~~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  332 (506)
                      ++...+.  .+....|+++.+++...+. .....++++++.+++.++++||+|||+++++|++++|++||++|+||++||
T Consensus       263 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei  342 (500)
T PLN02169        263 RKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEI  342 (500)
T ss_pred             HHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence            7642111  1122468999999864321 101247889999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCcccccccccccee-eeeEEeCCCCEEEEehhhhhcCCCCC-CCCC
Q 010625          333 DRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCK-VAGYDLLKNSRVLINIWTIGRDPTIW-EKPN  410 (506)
Q Consensus       333 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~-l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~  410 (506)
                      ++++      +++++.+||||+|||+||||++|++|... |.+.+|.+ ++|+.||||+.|+++.|++||||++| +||+
T Consensus       343 ~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        343 NTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             HhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence            9863      67899999999999999999999999987 77666655 49999999999999999999999999 8999


Q ss_pred             CCCCCCCCCCCcccc-CCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecC
Q 010625          411 EFWPDRFIGKEIDVK-GHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKN  489 (506)
Q Consensus       411 ~f~p~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (506)
                      +||||||++++++.. ..+..|+|||+|+|.|+|++||++|+++++|.|+++|+++++++.   +.  ....++++.|++
T Consensus       416 ~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~l~~~~  490 (500)
T PLN02169        416 DFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSILLRMKH  490 (500)
T ss_pred             hcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceEEecCC
Confidence            999999997544322 236789999999999999999999999999999999999986542   22  234567888999


Q ss_pred             ceeeeecCCC
Q 010625          490 PLVVVPTKPR  499 (506)
Q Consensus       490 ~~~v~~~~~r  499 (506)
                      +++|+++ +|
T Consensus       491 gl~l~l~-~~  499 (500)
T PLN02169        491 GLKVTVT-KK  499 (500)
T ss_pred             CEEEEEE-eC
Confidence            9999999 76


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=8.9e-73  Score=558.51  Aligned_cols=451  Identities=20%  Similarity=0.293  Sum_probs=343.5

Q ss_pred             CCCCCCCccccccccCCCCChHHHHHHHhhh---CCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCcc-cccee
Q 010625           31 PPGPKPWPIIGNLNLIGPLPHISIHSLSRKY---GPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLL-AGKYL  106 (506)
Q Consensus        31 ~pgp~~~p~lG~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~-~~~~~  106 (506)
                      +|||+++|++||++.+..+ +..+.++.++|   |++|++++++.++++++||+.+++|+.++...|.+..... .... 
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~-  109 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV-  109 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH-
Confidence            6999999999999776433 33456777777   8999999999999999999999999987544454443211 1111 


Q ss_pred             eccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHH-HHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHHHHHh
Q 010625          107 TYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMR-VEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTMSRMV  183 (506)
Q Consensus       107 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~~~~~  183 (506)
                       ..+.++ ++.+|+.|+++||.+ ++.|+..+++.+.+.+ .+.++.+++.+.+.  .+.++|+.++++.+++|+++.++
T Consensus       110 -~~g~~l-~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        110 -LLGDGI-FNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             -HhcCee-eccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence             113454 445699999999999 7999999999998876 56677777766543  45679999999999999999999


Q ss_pred             hcccccccccCCCCChHHHHHHHHHHHHHhccccccccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010625          184 LGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPW--LAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKS  261 (506)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (506)
                      ||.+++..+...  ....+.+.+.........   ....|+  +..+......+...+..+.+.+++.+.+++++++..+
T Consensus       187 fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        187 FGVEIGTLSPSL--PENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             hCCCccccccCC--CccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999987543211  112344444433222110   001121  1111111123444567778888999999888765422


Q ss_pred             C---CCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcC
Q 010625          262 G---KDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGR  338 (506)
Q Consensus       262 ~---~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  338 (506)
                      +   ......|+++.++++..+.  +..++++++.++++++++||+|||+++++|++|+|++||++|++|++|+++++++
T Consensus       262 ~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~  339 (516)
T PLN03195        262 ARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKE  339 (516)
T ss_pred             cccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc
Confidence            1   1123568999999765432  2368999999999999999999999999999999999999999999999998743


Q ss_pred             --------------------CCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceee-eeEEeCCCCEEEEehh
Q 010625          339 --------------------DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKV-AGYDLLKNSRVLINIW  397 (506)
Q Consensus       339 --------------------~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~  397 (506)
                                          ++.++++++.+||||+|||+||||++|+++... |.+.+|.++ +|+.||||+.|+++.+
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~  418 (516)
T PLN03195        340 RAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPY  418 (516)
T ss_pred             ccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehH
Confidence                                245789999999999999999999999999986 767776665 8999999999999999


Q ss_pred             hhhcCCCCC-CCCCCCCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCC
Q 010625          398 TIGRDPTIW-EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLD  476 (506)
Q Consensus       398 ~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  476 (506)
                      ++||||++| +||++|+||||++.+......+..++|||+|+|.|+|++||++|+++++|.|+++|++++.++.   +. 
T Consensus       419 ~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~~-  494 (516)
T PLN03195        419 SMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---PV-  494 (516)
T ss_pred             hhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---cc-
Confidence            999999999 9999999999996432122345689999999999999999999999999999999999986542   22 


Q ss_pred             cccccCceeeecCceeeeecCCCC
Q 010625          477 MEERFGLTTCKKNPLVVVPTKPRL  500 (506)
Q Consensus       477 ~~~~~~~~~~~~~~~~v~~~~~r~  500 (506)
                       ......+..|+.+++|+++ +|.
T Consensus       495 -~~~~~~~~~~~~~~~v~~~-~r~  516 (516)
T PLN03195        495 -KYRMMTILSMANGLKVTVS-RRS  516 (516)
T ss_pred             -eeeeeeEEecCCCEEEEEE-eCC
Confidence             2234456778889999999 874


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.8e-73  Score=549.84  Aligned_cols=440  Identities=20%  Similarity=0.310  Sum_probs=351.5

Q ss_pred             HHHHHHHhhhhccCCCCCCCCCCCCCCccccccccC-CCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHh
Q 010625           11 VLLLFFRRHYYSRNPKKPNLPPGPKPWPIIGNLNLI-GPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKT   89 (506)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~   89 (506)
                      ++++.++..+..+..++.+.||||+++|++|+++++ .++++.++.+++++||++|+++++++++++++||+.+++++.+
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~   96 (463)
T PLN02196         17 LCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVT   96 (463)
T ss_pred             HHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhC
Confidence            333444444455556677889999999999999876 6788999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHhCCCCccHHH
Q 010625           90 HDLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKD  169 (506)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~  169 (506)
                      +...+.  +..........+..++ +..+|+.|+++||.+ .+.|++++++.+.+.+.+.++++++.|.   +.++|+.+
T Consensus        97 ~~~~~~--~~~~~~~~~~~g~~~l-~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~  169 (463)
T PLN02196         97 KSHLFK--PTFPASKERMLGKQAI-FFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQ  169 (463)
T ss_pred             CCCccc--ccCchHHHHHcCcccc-cccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHH
Confidence            766553  2211111112222334 445699999999999 6899999999999999999999998874   45799999


Q ss_pred             HHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHH
Q 010625          170 RLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYE  249 (506)
Q Consensus       170 ~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  249 (506)
                      +++.+++++++.++||.+.....       ..+.+.+..+...      ...+|+..+   ....++..++.+.+.+++.
T Consensus       170 ~~~~~~~~v~~~~~fG~~~~~~~-------~~~~~~~~~~~~~------~~~~~~~~p---~~~~~~~~~a~~~~~~~~~  233 (463)
T PLN02196        170 EMKTYTFNVALLSIFGKDEVLYR-------EDLKRCYYILEKG------YNSMPINLP---GTLFHKSMKARKELAQILA  233 (463)
T ss_pred             HHHHHHHHHHHHHHcCCCCchHH-------HHHHHHHHHHhcc------hhcccccCC---CccchHHHHHHHHHHHHHH
Confidence            99999999999999998753221       2232222221111      112233211   1123456677888889999


Q ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHH
Q 010625          250 QILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKAT  329 (506)
Q Consensus       250 ~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr  329 (506)
                      +.|+++++..     ....|+++.+++.      ..+++++++.++++++++||+|||+++++|++++|++||++|++++
T Consensus       234 ~~i~~~~~~~-----~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~  302 (463)
T PLN02196        234 KILSKRRQNG-----SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVT  302 (463)
T ss_pred             HHHHHHhhcC-----CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            9888776532     2357899999863      1268999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhcC---CCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCC
Q 010625          330 EELDRVIGR---DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIW  406 (506)
Q Consensus       330 ~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~  406 (506)
                      +|++++.+.   ++.++.+++++||||+|||+||+|++|++++.. |.+.+|++++||.||||+.|+++.+++||||++|
T Consensus       303 ~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~  381 (463)
T PLN02196        303 EEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIF  381 (463)
T ss_pred             HHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhc
Confidence            999998863   456889999999999999999999999999876 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceee
Q 010625          407 EKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTC  486 (506)
Q Consensus       407 ~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  486 (506)
                      +||++|+||||++..     .+..++|||+|+|.|+|+++|++|+++++|.|+++|++++.++.    .+..  ...+..
T Consensus       382 ~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~  450 (463)
T PLN02196        382 SDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS----NGIQ--YGPFAL  450 (463)
T ss_pred             CCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC----CceE--Eccccc
Confidence            999999999999632     34689999999999999999999999999999999999986552    1222  233456


Q ss_pred             ecCceeeeec
Q 010625          487 KKNPLVVVPT  496 (506)
Q Consensus       487 ~~~~~~v~~~  496 (506)
                      |+++++|+++
T Consensus       451 p~~~~~~~~~  460 (463)
T PLN02196        451 PQNGLPIALS  460 (463)
T ss_pred             CCCCceEEEe
Confidence            8889999987


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5e-72  Score=554.64  Aligned_cols=433  Identities=20%  Similarity=0.357  Sum_probs=337.3

Q ss_pred             CCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccceeeccCcceEeCCCChHHHHHH
Q 010625           47 GPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGKYLTYDYTGMGTAPYSPYWRQAR  126 (506)
Q Consensus        47 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R  126 (506)
                      ++.++..+.+++++|||||++++|+.++++|+||+.+++|+..+...|.++.........  .+.+++ +.+|+.|+.+|
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l~-~~dge~wr~rR  226 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGLI-PADGEIWRVRR  226 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCcee-cCCcHHHHHHH
Confidence            456778999999999999999999999999999999999999776666655332111111  234554 45699999999


Q ss_pred             hHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHH
Q 010625          127 KICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTE  204 (506)
Q Consensus       127 k~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~  204 (506)
                      +.+ .+.|+...++.+.+.+.+.++++++.+.+.  .+.++|+.+.+..+++|+++.++||.+++...++     ..+..
T Consensus       227 r~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-----~~~~~  300 (633)
T PLN02738        227 RAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-----TGIVE  300 (633)
T ss_pred             Hhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-----hHHHH
Confidence            999 799999999999999999999999999764  4678999999999999999999999998753311     22333


Q ss_pred             HHHHHHHHhcccccccccccccccc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCcCcHHHHH
Q 010625          205 MLEELFLVHGTLDIGDAIPWLAPLD--LQGHVKRMKDVNRKLDRFYEQILDERYARKKSG--------KDQGVNDMVDVL  274 (506)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~P~l~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~d~~~~l  274 (506)
                      .+..............+.+|..++.  .....++..+..+.+.++.+++++.+++..++.        ......|+++.|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~L  380 (633)
T PLN02738        301 AVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFL  380 (633)
T ss_pred             HHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHH
Confidence            3333222111101111222322210  011124444556666666776666544322111        112346899999


Q ss_pred             hcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCccccccCCCChhHH
Q 010625          275 VQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQ  354 (506)
Q Consensus       275 l~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~  354 (506)
                      ++..      ..++++++.++++.+++||+|||+++|+|++++|++||++|+|||+|+++++++ +.++++++++||||+
T Consensus       381 l~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~  453 (633)
T PLN02738        381 LASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTT  453 (633)
T ss_pred             HHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHH
Confidence            8752      258899999999999999999999999999999999999999999999999884 668999999999999


Q ss_pred             HHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCCCc--cccCCCccee
Q 010625          355 AIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEI--DVKGHDYELL  432 (506)
Q Consensus       355 a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~--~~~~~~~~~~  432 (506)
                      |||+|+|||+|+++... |++.+|++++||.||+||.|+++.+.+||||++|+||++|+||||+....  +.......++
T Consensus       454 AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~v  532 (633)
T PLN02738        454 RVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYL  532 (633)
T ss_pred             HHHHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCcee
Confidence            99999999999999865 99999999999999999999999999999999999999999999985321  1123456899


Q ss_pred             ccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeecCCCCC
Q 010625          433 PFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRLP  501 (506)
Q Consensus       433 ~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~r~~  501 (506)
                      |||.|+|.|+|++||++|+++++|.|+++|++++.++.  .+  .......+..++++++|+++ +|..
T Consensus       533 pFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~--~~--~~~~~~~~~~p~~~l~v~l~-~R~~  596 (633)
T PLN02738        533 PFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA--PP--VKMTTGATIHTTEGLKMTVT-RRTK  596 (633)
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC--CC--cccccceEEeeCCCcEEEEE-ECCC
Confidence            99999999999999999999999999999999997663  12  22234567778889999999 8854


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.8e-71  Score=544.35  Aligned_cols=440  Identities=22%  Similarity=0.314  Sum_probs=348.9

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CCCChHHHHHHHhhhCC--eEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCC
Q 010625           25 PKKPNLPPGPKPWPIIGNLNLI-----GPLPHISIHSLSRKYGP--LMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSR   97 (506)
Q Consensus        25 ~~~~~~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~   97 (506)
                      .++.+.||||+++|++|+++.+     ..+++.++.+++++||+  +|++++++.+.++++||+.+++|+.++ ..|..+
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccC
Confidence            3455789999999999999876     34788899999999997  799999999999999999999999865 445433


Q ss_pred             CCccccceeeccCcceEeCCCChHHHHHHhHHHhhcC-ChHHHhhhHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHH
Q 010625           98 PQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELL-SPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLNL  176 (506)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~  176 (506)
                      .......  .. +.+.+...+|+.|+++||.+ .+.| +++.++.+.+.+.+.++++++.+..  ++.+|+.++++.+++
T Consensus       117 ~~~~~~~--~~-g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~  190 (490)
T PLN02302        117 WPESTVE--LI-GRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTF  190 (490)
T ss_pred             CchhHHH--Hh-ccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHH
Confidence            2221111  11 22334445699999999999 6777 5788999999999999999998864  356999999999999


Q ss_pred             HHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          177 STMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERY  256 (506)
Q Consensus       177 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (506)
                      ++++.++||.+.+...       ..+...+..........  ...+|..       ...+..+..+.+.+++.+.|++++
T Consensus       191 ~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        191 KIIMYIFLSSESELVM-------EALEREYTTLNYGVRAM--AINLPGF-------AYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHcCCCChHHH-------HHHHHHHHHHHHHhhhC--CcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998765322       33333222222111110  0111211       123445567788899999998887


Q ss_pred             HHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhh
Q 010625          257 ARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVI  336 (506)
Q Consensus       257 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  336 (506)
                      +..+.+......|+++.++++..+.  +..++++++.++++.+++||+|||+++++|++++|++||++|+++++|+++++
T Consensus       255 ~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~  332 (490)
T PLN02302        255 NSRKQNISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIA  332 (490)
T ss_pred             HhhhccCCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            6543222235689999999875433  23589999999999999999999999999999999999999999999999998


Q ss_pred             cCC----CccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCC
Q 010625          337 GRD----RWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEF  412 (506)
Q Consensus       337 ~~~----~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f  412 (506)
                      ++.    ..++++++++||||+|||+|++|++|+++... |.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       333 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~-R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F  411 (490)
T PLN02302        333 KKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVF-REAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEF  411 (490)
T ss_pred             hcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccch-hcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcccc
Confidence            642    23789999999999999999999999998864 9999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCcee
Q 010625          413 WPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLV  492 (506)
Q Consensus       413 ~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (506)
                      +||||++..    ..+..++|||+|+|.|+|++||.+|++++++.|+++||+++.++.  .  ...  ...+..|++++.
T Consensus       412 ~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~--~~~--~~~~~~p~~~~~  481 (490)
T PLN02302        412 DPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG--C--KVM--YLPHPRPKDNCL  481 (490)
T ss_pred             ChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC--C--cce--eCCCCCCCCCce
Confidence            999999653    245679999999999999999999999999999999999986542  1  121  223367888999


Q ss_pred             eeecCCCCC
Q 010625          493 VVPTKPRLP  501 (506)
Q Consensus       493 v~~~~~r~~  501 (506)
                      |+++ +|.+
T Consensus       482 ~~~~-~~~~  489 (490)
T PLN02302        482 ARIT-KVAS  489 (490)
T ss_pred             EEEE-eccC
Confidence            9999 8764


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=8.4e-71  Score=533.64  Aligned_cols=438  Identities=18%  Similarity=0.245  Sum_probs=343.3

Q ss_pred             cCCCCCCCCCCCCCCccccccccCC-----CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCC
Q 010625           23 RNPKKPNLPPGPKPWPIIGNLNLIG-----PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSR   97 (506)
Q Consensus        23 ~~~~~~~~~pgp~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~   97 (506)
                      .+..+.+.||||.++|++||++++.     .++..++.+++++||++|+++++++++++|+||+.+++++.++...|.++
T Consensus        24 ~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~  103 (472)
T PLN02987         24 TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECS  103 (472)
T ss_pred             hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEec
Confidence            3345566789999999999998862     46788899999999999999999999999999999999999877777554


Q ss_pred             CCccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHH-HHHHHHHHHHHHHHHhCCCCccHHHHHHHHHH
Q 010625           98 PQLLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEY-MRVEERKLFLHDMFKSCSKPVQLKDRLYMLNL  176 (506)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~  176 (506)
                      ........+  ++.+++++ +|+.|+++|+.+ .+.++...++.+.. .+.+.+...++.|    ++++|+.+.++++++
T Consensus       104 ~~~~~~~~l--g~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~  175 (472)
T PLN02987        104 YPGSISNLL--GKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITF  175 (472)
T ss_pred             CcHHHHHHh--Cccccccc-CcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHH
Confidence            322222222  23455555 599999999997 45555555554331 2333334444444    246999999999999


Q ss_pred             HHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          177 STMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERY  256 (506)
Q Consensus       177 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (506)
                      +++++++||.+.+...       +.+.+.+.......    ....+|++.     ...++..+..+.+.+++.+.|++++
T Consensus       176 ~vi~~~~fg~~~~~~~-------~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        176 ELTVKQLMSFDPGEWT-------ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHHHHcCCCChHHH-------HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998764322       33333333222111    112245432     2256677889999999999999987


Q ss_pred             HHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhh
Q 010625          257 ARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVI  336 (506)
Q Consensus       257 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  336 (506)
                      +..+.+ .....|+++.+++..      .+++++++.++++++++||+|||+.+++|++++|++||++|+++++|++++.
T Consensus       240 ~~~~~~-~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~  312 (472)
T PLN02987        240 KEEEEG-AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIR  312 (472)
T ss_pred             hhhhcc-CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            654222 234579999999753      1689999999999999999999999999999999999999999999999987


Q ss_pred             c---CCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCC
Q 010625          337 G---RDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFW  413 (506)
Q Consensus       337 ~---~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  413 (506)
                      +   ++..++.+++.+|||++||++||+|++|+++.. +|++.+|++++||.||+|+.|+++.+.+|+||++|+||++||
T Consensus       313 ~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~  391 (472)
T PLN02987        313 AMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFN  391 (472)
T ss_pred             cccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccC
Confidence            5   235578899999999999999999999999765 499999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceee
Q 010625          414 PDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVV  493 (506)
Q Consensus       414 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  493 (506)
                      ||||++.+.. ......++|||+|+|.|||++||++|++++++.|+++|+++++++.   +  .  ....++.|.+++++
T Consensus       392 PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~--~~~~~~~p~~~~~~  463 (472)
T PLN02987        392 PWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---K--L--VFFPTTRTQKRYPI  463 (472)
T ss_pred             cccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---c--e--eecccccCCCCceE
Confidence            9999975432 1234679999999999999999999999999999999999986553   2  1  12348888889999


Q ss_pred             eecCCCCC
Q 010625          494 VPTKPRLP  501 (506)
Q Consensus       494 ~~~~~r~~  501 (506)
                      +++ +|+.
T Consensus       464 ~~~-~r~~  470 (472)
T PLN02987        464 NVK-RRDV  470 (472)
T ss_pred             EEE-eccc
Confidence            999 8864


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.8e-71  Score=537.78  Aligned_cols=436  Identities=20%  Similarity=0.272  Sum_probs=346.2

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCC
Q 010625           25 PKKPNLPPGPKPWPIIGNLNLI-----GPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQ   99 (506)
Q Consensus        25 ~~~~~~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~   99 (506)
                      +++.+.||||.++|++||++.+     ..+++.++.+++++||+||++++++.++++++||+++++++.++...|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4566788999999999999887     24678899999999999999999999999999999999999988776764432


Q ss_pred             ccccceeeccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhh-HHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHH
Q 010625          100 LLAGKYLTYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQF-EYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLNLST  178 (506)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~~  178 (506)
                      ..... . .+..+ ++..+|+.|+++|+.+ .+.|+...+..+ .+.+.+.++++++.+.  .+.++|+.+.+..+++++
T Consensus        83 ~~~~~-l-~g~~~-~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         83 KSLTE-L-MGKSS-ILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAFEV  156 (452)
T ss_pred             hhHHH-H-hCccc-ccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHHHH
Confidence            21111 1 12223 4445699999999998 688888777653 5666777777776663  256799999999999999


Q ss_pred             HHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010625          179 MSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYAR  258 (506)
Q Consensus       179 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (506)
                      ++.++||.+.+...       .++...+..+.....      .+|+.  + +.....+..++.+.+.+++.+.|+++++.
T Consensus       157 i~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~--~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        157 LVKALISLEPGEEM-------EFLKKEFQEFIKGLM------SLPIK--L-PGTRLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHcCCCchHHH-------HHHHHHHHHHhhhHH------hCccC--C-CchHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999997754221       333333333322111      12211  1 11112345567889999999999988766


Q ss_pred             HhcCCC---CCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHh
Q 010625          259 KKSGKD---QGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRV  335 (506)
Q Consensus       259 ~~~~~~---~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  335 (506)
                      .+.+..   ....|+++.++++..     ..++++++..+++.+++||+|||+.+++|++++|+.||++|+++++|++++
T Consensus       221 ~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~  295 (452)
T PLN03141        221 MKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKL  295 (452)
T ss_pred             HhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            522211   124689999997642     268999999999999999999999999999999999999999999999988


Q ss_pred             hc----CCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCC
Q 010625          336 IG----RDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE  411 (506)
Q Consensus       336 ~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  411 (506)
                      ++    .+..++.+++.+||||+|||+|++|++|++++. +|.+.+|++++||.||||+.|+++.+++|+|+++|+||++
T Consensus       296 ~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~  374 (452)
T PLN03141        296 KRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQ  374 (452)
T ss_pred             HhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccc
Confidence            63    244578899999999999999999999998754 6999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCce
Q 010625          412 FWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPL  491 (506)
Q Consensus       412 f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (506)
                      |+||||++.+.    .+..++|||+|+|.|+|++||++|+++++|.|+++|++++.++.   ..     ...++.|+.++
T Consensus       375 F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~~~~~~~  442 (452)
T PLN03141        375 FNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTVRMKRKL  442 (452)
T ss_pred             cCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----ecccccCCCCc
Confidence            99999997532    35689999999999999999999999999999999999986552   11     12477888899


Q ss_pred             eeeecCCCCC
Q 010625          492 VVVPTKPRLP  501 (506)
Q Consensus       492 ~v~~~~~r~~  501 (506)
                      .|+++ +|++
T Consensus       443 ~~~~~-~~~~  451 (452)
T PLN03141        443 PIWVT-RIDD  451 (452)
T ss_pred             eEEEE-eCCC
Confidence            99999 9965


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.7e-71  Score=491.87  Aligned_cols=443  Identities=21%  Similarity=0.319  Sum_probs=363.3

Q ss_pred             CCCCCCCC-CccccccccCCCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCccccceee
Q 010625           29 NLPPGPKP-WPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGKYLT  107 (506)
Q Consensus        29 ~~~pgp~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~~~~  107 (506)
                      ..||.-.+ +|++|++..|++++..+++++++|||+||++.++|+.+.++.+|+....+++.+...++............
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            47787655 69999999999999999999999999999999999999999999999999997643343332221222222


Q ss_pred             ccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHH-HHHhCCCCccHHHHHHHHHHHHHHHHhhcc
Q 010625          108 YDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHD-MFKSCSKPVQLKDRLYMLNLSTMSRMVLGK  186 (506)
Q Consensus       108 ~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~vdl~~~~~~~~~~~~~~~~fG~  186 (506)
                      + +.|++..........+.+.+ +..+....++++.+.|.++.++.++. +.+ ++.+..+..+++.+.+.+.-.++||+
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~e  187 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGGE  187 (486)
T ss_pred             c-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhhh
Confidence            2 35677766677788888888 68889999999999999999999988 444 56778899999999999999999998


Q ss_pred             cccccccCCCCChHHHHHHHHHHHHHhcccccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010625          187 RYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIP-WLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQ  265 (506)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (506)
                      .....+       .+....+.++.+.+..  +...|| ++..   + ..++..++++.+.+.+...|.++++..    +.
T Consensus       188 ~r~~~d-------~~~a~l~~dLd~~F~~--~d~~FP~~LP~---~-~~r~~~ra~~~i~k~f~~~i~~rr~s~----s~  250 (486)
T KOG0684|consen  188 VRDQLD-------ADVAKLYHDLDQGFQP--FDFLFPYNLPI---P-LLRRRDRARKKISKIFSKIILDRRASI----SK  250 (486)
T ss_pred             hhhhhc-------chHHHHHHHHhccccc--hHhhcccCCCc---c-hhhhHHHHHHHHHHHHHHHHHHHHhcc----cc
Confidence            887654       4444444444443222  223455 3321   2 245555888999999999999888764    34


Q ss_pred             CcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCc-ccc
Q 010625          266 GVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRW-VQE  344 (506)
Q Consensus       266 ~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-~~~  344 (506)
                      ...|+++.+++...+   +...+++|+++..+.++|||++||+++.+|++++|++||++++++++|++++++.+.. +++
T Consensus       251 ~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  251 WDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             ccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence            567999999984333   3378999999999999999999999999999999999999999999999999987554 999


Q ss_pred             ccCCCChhHHHHHHhhhcCCCCCccccccccccceeeee----EEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCC
Q 010625          345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAG----YDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGK  420 (506)
Q Consensus       345 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~  420 (506)
                      +.|++||.|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|..|.+++..+|+||++|+||++|+|+||+++
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            999999999999999999999988887 99999999976    9999999999999999999999999999999999976


Q ss_pred             Cccc----cCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeec
Q 010625          421 EIDV----KGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPT  496 (506)
Q Consensus       421 ~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  496 (506)
                      +++.    ..-++.++|||+|.|.|||+.||.+|++.++..+|++||+++.++ ...++++.   ..+..|..++.|+.+
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s---~~v~~P~g~v~irYK  482 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYS---RMVMQPEGDVRIRYK  482 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHH---HhhcCCCCCceEEEe
Confidence            6543    122345699999999999999999999999999999999999987 22333443   337888999999999


Q ss_pred             CCCC
Q 010625          497 KPRL  500 (506)
Q Consensus       497 ~~r~  500 (506)
                       .|+
T Consensus       483 -~R~  485 (486)
T KOG0684|consen  483 -RRP  485 (486)
T ss_pred             -ecC
Confidence             875


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=5.5e-70  Score=533.37  Aligned_cols=448  Identities=23%  Similarity=0.351  Sum_probs=353.3

Q ss_pred             CCCCCCccccccccC-----CCCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCcccccee
Q 010625           32 PGPKPWPIIGNLNLI-----GPLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLLAGKYL  106 (506)
Q Consensus        32 pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~~~  106 (506)
                      -|-.|||++|..+++     ++.++..+.+++++||++|++++++.+.++++||+++++|+.+....|.++.........
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~   94 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL   94 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence            577889999999987     577899999999999999999999999999999999999998766667655432211111


Q ss_pred             eccCcceEeCCCChHHHHHHhHHHhhcCChHHHhhhHH-HHHHHHHHHHHHHHHh--CCCCccHHHHHHHHHHHHHHHHh
Q 010625          107 TYDYTGMGTAPYSPYWRQARKICVMELLSPKRLDQFEY-MRVEERKLFLHDMFKS--CSKPVQLKDRLYMLNLSTMSRMV  183 (506)
Q Consensus       107 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~~~~~~~~  183 (506)
                        .+.++++ .+|+.|+++||.+ .+.|+...+..+.+ ++.+.++.+++.+.+.  .+.++|+.++++.+++++++.++
T Consensus        95 --~~~~i~~-~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         95 --FGSGFAI-AEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             --hcCcccc-CCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence              1344444 4599999999999 79999988888754 7888899999998765  45789999999999999999999


Q ss_pred             hcccccccccCCCCChHHHHHHHHHHHHHhcccccccccccccc--cc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010625          184 LGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAP--LD-LQGHVKRMKDVNRKLDRFYEQILDERYARKK  260 (506)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (506)
                      ||.+++....+     .++.+.+......... .....+|++..  +. ..+..++..++.+.+.+++.+.++++++..+
T Consensus       171 fG~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~  244 (489)
T PLN02936        171 FNYNFDSLTTD-----SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVE  244 (489)
T ss_pred             cCCCccccccC-----cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998754311     2333333332222111 11123343210  00 0112456677788888999998887765432


Q ss_pred             cCC---------CCCcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHH
Q 010625          261 SGK---------DQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEE  331 (506)
Q Consensus       261 ~~~---------~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~E  331 (506)
                      +..         .+...|+++.|++...      .++.+++.++++++++||+|||+++++|++|+|++||++|+++|+|
T Consensus       245 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~E  318 (489)
T PLN02936        245 AEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEE  318 (489)
T ss_pred             hcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            111         1234679999987532      5889999999999999999999999999999999999999999999


Q ss_pred             HhHhhcCCCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCC
Q 010625          332 LDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNE  411 (506)
Q Consensus       332 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  411 (506)
                      ++++++. ..++++++++||||+|||+||||++|+++...+|.+..|+.++||.||+|+.|+++.+++||||++|+||++
T Consensus       319 i~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~  397 (489)
T PLN02936        319 LDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEE  397 (489)
T ss_pred             HHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccc
Confidence            9999885 457899999999999999999999999999886777888888999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcc--ccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecC
Q 010625          412 FWPDRFIGKEID--VKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKN  489 (506)
Q Consensus       412 f~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (506)
                      |+||||+.++..  ....+..++|||.|+|.|||++||++|+++++++|+++|+++++++.   +...  ...++..++.
T Consensus       398 F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~~~~  472 (489)
T PLN02936        398 FVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIVM--TTGATIHTTN  472 (489)
T ss_pred             cCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccce--ecceEEeeCC
Confidence            999999964321  12234589999999999999999999999999999999999987653   2222  2345666778


Q ss_pred             ceeeeecCCCCCC
Q 010625          490 PLVVVPTKPRLPH  502 (506)
Q Consensus       490 ~~~v~~~~~r~~~  502 (506)
                      +++|+++ +|...
T Consensus       473 ~~~v~~~-~R~~~  484 (489)
T PLN02936        473 GLYMTVS-RRRVP  484 (489)
T ss_pred             CeEEEEE-eeeCC
Confidence            9999999 88643


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.3e-68  Score=518.74  Aligned_cols=439  Identities=21%  Similarity=0.248  Sum_probs=340.2

Q ss_pred             CccccccccCCCCChHHHHHHHhhhC-CeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCCCCCcc-ccceeeccCcceE
Q 010625           37 WPIIGNLNLIGPLPHISIHSLSRKYG-PLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSSRPQLL-AGKYLTYDYTGMG  114 (506)
Q Consensus        37 ~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  114 (506)
                      .++.|++.....+...++.++.++++ .+++++..+.  ++++||+.+++|+..+...|.+..... .....  .+.|++
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi~  124 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGIF  124 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCcee
Confidence            55889987765667778877888887 5788776554  899999999999997755665443221 11111  145554


Q ss_pred             eCCCChHHHHHHhHHHhhcCChHHHhhhH--HHHHHHHHHHHHHHHHh----CCCCccHHHHHHHHHHHHHHHHhhcccc
Q 010625          115 TAPYSPYWRQARKICVMELLSPKRLDQFE--YMRVEERKLFLHDMFKS----CSKPVQLKDRLYMLNLSTMSRMVLGKRY  188 (506)
Q Consensus       115 ~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~~----~~~~vdl~~~~~~~~~~~~~~~~fG~~~  188 (506)
                      . .+|+.|+++||.+ ++.|+...++.+.  +.+.+..+++++.+.+.    .+.++|+.++++.+++|+++.++||.++
T Consensus       125 ~-~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        125 N-VDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             e-cCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            4 5699999999999 7999999998864  67777778888877653    2357999999999999999999999998


Q ss_pred             cccccCCCCChHHHHHHHHHHHHHhcccccccccccccc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010625          189 TEEDENNIVTPKEFTEMLEELFLVHGTLDIGDAIPWLAP---LDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQ  265 (506)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (506)
                      +..+..  ....++...++.+...... ......|++++   +.+.+..++..+..+.+.+++.++|+++++..    .+
T Consensus       203 ~~l~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----~~  275 (502)
T PLN02426        203 GCLELS--LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG----FS  275 (502)
T ss_pred             cccCCC--CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc----cC
Confidence            754321  1114455555443322111 01112233221   11122346677788899999999999877542    12


Q ss_pred             CcCcHHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCC-Ccccc
Q 010625          266 GVNDMVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRD-RWVQE  344 (506)
Q Consensus       266 ~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~  344 (506)
                      ...|+++.++++.        .+++++.++++++++||+|||+++|+|++|+|++||++|++|++|++++++.+ ..+++
T Consensus       276 ~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~  347 (502)
T PLN02426        276 ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASF  347 (502)
T ss_pred             CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCH
Confidence            3579999999752        35789999999999999999999999999999999999999999999998753 36899


Q ss_pred             ccCCCChhHHHHHHhhhcCCCCCccccccccccceee-eeEEeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCCCCCCCc
Q 010625          345 KDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKV-AGYDLLKNSRVLINIWTIGRDPTIW-EKPNEFWPDRFIGKEI  422 (506)
Q Consensus       345 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~  422 (506)
                      +++++||||+|||+||||++|+++... |.+.+|.++ +|+.||+||.|.++.+++||||++| +||++|+||||++++.
T Consensus       348 ~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        348 EEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            999999999999999999999999876 999998887 8999999999999999999999999 9999999999997432


Q ss_pred             cccCCCcceeccCCCCCCCCchhHHHHHHHHHHHHHhhccccccCCCCCCCCCCcccccCceeeecCceeeeecCCCCC
Q 010625          423 DVKGHDYELLPFGSGRRMCLGYGLGLKLVQSSLANLLHGFEWKLPGDMKRQDLDMEERFGLTTCKKNPLVVVPTKPRLP  501 (506)
Q Consensus       423 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~r~~  501 (506)
                      .....+..++|||+|+|.|+|+++|++|+++++|.|+++|+++++++..  + ......++++.++++++|+++ +|..
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~-~~~~~~~~~~~~~~gl~v~~~-~r~~  501 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN--R-APRFAPGLTATVRGGLPVRVR-ERVR  501 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC--C-CCcccceeEEecCCCEEEEEE-EccC
Confidence            1123456799999999999999999999999999999999999864421  1 122234678899999999999 8854


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=5.5e-61  Score=461.06  Aligned_cols=406  Identities=17%  Similarity=0.207  Sum_probs=295.8

Q ss_pred             CCCCCCCCCCCccccccccC-----CCCChHHHHHHHhhhCC-eEEEeecCeeE-------EEecCHHHHHHHHHh----
Q 010625           27 KPNLPPGPKPWPIIGNLNLI-----GPLPHISIHSLSRKYGP-LMHLKFGFDSV-------VVGSSVEVAELLLKT----   89 (506)
Q Consensus        27 ~~~~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~v~dp~~v~~v~~~----   89 (506)
                      +.+.|||+.+||++|++++|     ..++..++.+.++|||+ ||+++++|.++       ++++||+.++.|+..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            45679999999999999875     45668999999999999 99999988655       999999999999984    


Q ss_pred             CCCCCCCCCCccccceeeccCc--ceEeCCCChHHHHHHhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHh--CCCCc
Q 010625           90 HDLSFSSRPQLLAGKYLTYDYT--GMGTAPYSPYWRQARKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKS--CSKPV  165 (506)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~v  165 (506)
                      +...+..... ....  ..++.  ..+...+|+.|+++||++ .++|++ .++.+.+.|.+.++++++.|...  .+.++
T Consensus        95 ~~~~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         95 KRDVFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSFL-FELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             ccccceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHHH-HHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            3333333211 1112  22222  145556799999999999 799984 77889999999999999999653  35579


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHHHHHHHHhccccc-ccccc-ccccccc---cchHHHHHHH
Q 010625          166 QLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEMLEELFLVHGTLDI-GDAIP-WLAPLDL---QGHVKRMKDV  240 (506)
Q Consensus       166 dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P-~l~~~~~---~~~~~~~~~~  240 (506)
                      |+.+.++.+++|++++++||.+.+...     ....+........... .... ...+| ++..+..   ........+.
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~~~~~~-~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~  243 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQKWLALQ-LAPLASTGLPHVLEELLLHTFPLPFFLVKSD  243 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHHHHHHH-hhHHHHcCchHHHHHHhhcccCCchhhhhcc
Confidence            999999999999999999998765410     0011222222211100 0000 00011 0000000   0000000111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHhcccCCCcccccccHHHHHHHHHH-HhhhcccchHhHHHHHHHHHh
Q 010625          241 NRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEVKIERHQLKAIIQD-LLTAGTDTSALNVEWAMSLLL  319 (506)
Q Consensus       241 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~  319 (506)
                      .+.+.+++.+.                   ++.+++...+.    +++++|+.++++. +.+++++|++++++|++|+|+
T Consensus       244 ~~~~~~~~~~~-------------------~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~  300 (480)
T PLN02648        244 YDKLYDFFRAS-------------------ATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVG  300 (480)
T ss_pred             HHHHHHHHHHH-------------------HHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            11222222221                   12223222222    5899999999875 446777888889999999999


Q ss_pred             cCHH-HHHHHHHHHhHhhcC-CCccccccCCCChhHHHHHHhhhcCCCCCccccccccccceeee----eEEeCCCCEEE
Q 010625          320 KNPE-AIQKATEELDRVIGR-DRWVQEKDIVNLPYIQAIVKETMRLHPVVPLLIPRVAREDCKVA----GYDLLKNSRVL  393 (506)
Q Consensus       320 ~~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~----g~~ip~G~~v~  393 (506)
                      +||+ +|++|++|++++++. ++.++.+++.+||||++||+||||++|++++.. |++.+|++++    ||.||||+.|+
T Consensus       301 ~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~  379 (480)
T PLN02648        301 RAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLF  379 (480)
T ss_pred             cCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEE
Confidence            9995 999999999999863 456899999999999999999999999999887 8899999996    89999999999


Q ss_pred             EehhhhhcCCCCCCCCCCCCCCCCCCCCccccCCCcceecc---------CCCCCCCCchhHHHHHHHHHHHHHhhccc-
Q 010625          394 INIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPF---------GSGRRMCLGYGLGLKLVQSSLANLLHGFE-  463 (506)
Q Consensus       394 ~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~e~~~~la~ll~~f~-  463 (506)
                      ++.+.+||||++|+||++|||+||++++.+   ....+++|         |+|+|.|||++||++|++++++.|+++|+ 
T Consensus       380 ~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~  456 (480)
T PLN02648        380 GYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDS  456 (480)
T ss_pred             EChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCE
Confidence            999999999999999999999999875322   11234444         67789999999999999999999999998 


Q ss_pred             cccCCCC
Q 010625          464 WKLPGDM  470 (506)
Q Consensus       464 ~~~~~~~  470 (506)
                      +++.++.
T Consensus       457 ~~l~~~~  463 (480)
T PLN02648        457 FEIEVDT  463 (480)
T ss_pred             EeecCCc
Confidence            9987764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=6.3e-55  Score=414.71  Aligned_cols=360  Identities=28%  Similarity=0.419  Sum_probs=296.3

Q ss_pred             ChHHHHHHHhhhCCeEEEeecCee--EEEecCHHHHHHHHHhCCCCCCCCCCccccc--eeeccCcceEeCCCChHHHHH
Q 010625           50 PHISIHSLSRKYGPLMHLKFGFDS--VVVGSSVEVAELLLKTHDLSFSSRPQLLAGK--YLTYDYTGMGTAPYSPYWRQA  125 (506)
Q Consensus        50 ~~~~~~~~~~kyG~v~~~~~~~~~--~v~v~dp~~v~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  125 (506)
                      +......+.+.||.++.+...+..  +++++++++++++++++. .+++........  .....+.+.+...+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455667788889998888877755  899999999999999874 222222111111  111113333555669999999


Q ss_pred             HhHHHhhcCChHHHhhhHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHHH
Q 010625          126 RKICVMELLSPKRLDQFEYMRVEERKLFLHDMFKSCSKPVQLKDRLYMLNLSTMSRMVLGKRYTEEDENNIVTPKEFTEM  205 (506)
Q Consensus       126 Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~  205 (506)
                      ||++ ++.|+++.++.+.+.+.+.++++++.+ ... ...++.+.+..+++++++ .+||.+.....        .+...
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~--------~~~~~  170 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDRP--------QLLRW  170 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHH--------HHHHH
Confidence            9999 799999999999999999999999999 433 788999999999999999 99999886542        22222


Q ss_pred             HHHHHHHhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHhcccCCCcccc
Q 010625          206 LEELFLVHGTLDIGDAIPWLAPLDLQGHVKRMKDVNRKLDRFYEQILDERYARKKSGKDQGVNDMVDVLVQFADDPTLEV  285 (506)
Q Consensus       206 ~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~  285 (506)
                      .......        ..|....   .....+..++...+.+++.++|++++.       ...+|+++.++.+..+++  .
T Consensus       171 ~~~~~~~--------~~~~~~~---~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~~--~  230 (411)
T COG2124         171 SDALLLR--------LDPDLGP---EEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDGG--G  230 (411)
T ss_pred             HHHHHhc--------cCcccCC---cccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCCC--C
Confidence            2222211        0022221   223567788899999999999999882       567899999999877652  2


Q ss_pred             cccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCccccccCCCChhHHHHHHhhhcCCC
Q 010625          286 KIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMRLHP  365 (506)
Q Consensus       286 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~  365 (506)
                      .+|++|+.++++++++||+|||+++|+|++|.|++||++++++++|.+.                ||+.++++||||++|
T Consensus       231 ~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~p  294 (411)
T COG2124         231 RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYP  294 (411)
T ss_pred             cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCC
Confidence            5999999999999999999999999999999999999999999998775                789999999999999


Q ss_pred             CCccccccccccceeeeeEEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCCCCCCccccCCCcceeccCCCCCCCCchh
Q 010625          366 VVPLLIPRVAREDCKVAGYDLLKNSRVLINIWTIGRDPTIWEKPNEFWPDRFIGKEIDVKGHDYELLPFGSGRRMCLGYG  445 (506)
Q Consensus       366 ~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~  445 (506)
                      +++. .+|.+.+|++++|+.||+|+.|+++.+++||||++|+||++|||+||.          ..++|||+|+|.|+|..
T Consensus       295 pv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~  363 (411)
T COG2124         295 PVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAA  363 (411)
T ss_pred             chhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHH
Confidence            9999 669999999999999999999999999999999999999999999996          46899999999999999


Q ss_pred             HHHHHHHHHHHHHhhccccccCCC
Q 010625          446 LGLKLVQSSLANLLHGFEWKLPGD  469 (506)
Q Consensus       446 ~A~~e~~~~la~ll~~f~~~~~~~  469 (506)
                      ||++|++++++.+|++|+.....+
T Consensus       364 lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         364 LARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             HHHHHHHHHHHHHHHhCchhhcCC
Confidence            999999999999999999877555


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=68.68  E-value=20  Score=22.20  Aligned_cols=44  Identities=30%  Similarity=0.347  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHh
Q 010625          290 HQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELD  333 (506)
Q Consensus       290 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  333 (506)
                      -++..++..++-.|.|-.+-.++--|.+..-||+....+-+|+.
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            45667778888889998888888889999999999998888863


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=65.98  E-value=1.9  Score=36.40  Aligned_cols=43  Identities=19%  Similarity=0.132  Sum_probs=33.4

Q ss_pred             ChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEE
Q 010625          350 LPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLI  394 (506)
Q Consensus       350 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~  394 (506)
                      -..+.|||.|+..+......-+  +..+|+.++|..||||+.|+-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vrl--RLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVRL--RLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEEE--EEcCceEECCEEeCCCCEEEE
Confidence            3457899999998876553321  348899999999999998875


No 35 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=62.24  E-value=5  Score=31.39  Aligned_cols=33  Identities=18%  Similarity=0.297  Sum_probs=19.3

Q ss_pred             ChhHHHHHHHHHHHHHHhhhhccCCCCCCCCCC
Q 010625            1 MWYSILLFLPVLLLFFRRHYYSRNPKKPNLPPG   33 (506)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg   33 (506)
                      +|+++++++++++++++++..++++++...+.|
T Consensus         4 l~~iii~~i~l~~~~~~~~~rRR~r~G~~P~~g   36 (130)
T PF12273_consen    4 LFAIIIVAILLFLFLFYCHNRRRRRRGLQPIYG   36 (130)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Confidence            466677766666666666665555555433333


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=54.99  E-value=13  Score=23.94  Aligned_cols=24  Identities=33%  Similarity=0.592  Sum_probs=19.0

Q ss_pred             HHHHHhcCHHHHHHHHHHHhHhhc
Q 010625          314 AMSLLLKNPEAIQKATEELDRVIG  337 (506)
Q Consensus       314 ~l~~L~~~p~~~~~lr~Ei~~~~~  337 (506)
                      ++.+|.+||++.++|.+.=.+.++
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            578999999999999985554443


No 37 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=52.24  E-value=11  Score=24.54  Aligned_cols=7  Identities=29%  Similarity=0.696  Sum_probs=5.6

Q ss_pred             CCCCCCC
Q 010625          413 WPDRFIG  419 (506)
Q Consensus       413 ~p~R~l~  419 (506)
                      ||||||-
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888885


No 38 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=50.59  E-value=26  Score=24.84  Aligned_cols=23  Identities=17%  Similarity=0.355  Sum_probs=18.0

Q ss_pred             CHHHHHHHHHHHhHhhcCCCccc
Q 010625          321 NPEAIQKATEELDRVIGRDRWVQ  343 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~~~~~~~~~  343 (506)
                      .|++.+.+|+||.+++...-.++
T Consensus        35 ~pd~l~~Lr~eIl~VI~KYV~id   57 (88)
T COG0851          35 QPDYLEQLRKEILEVISKYVQID   57 (88)
T ss_pred             CcchHHHHHHHHHHHHHHHheeC
Confidence            38999999999999987643333


No 39 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=48.76  E-value=8  Score=24.27  Aligned_cols=10  Identities=50%  Similarity=1.072  Sum_probs=8.9

Q ss_pred             ccCCCCCCCC
Q 010625          433 PFGSGRRMCL  442 (506)
Q Consensus       433 ~Fg~G~r~C~  442 (506)
                      +||-|+|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            7999999985


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=47.78  E-value=25  Score=24.17  Aligned_cols=39  Identities=3%  Similarity=0.111  Sum_probs=31.8

Q ss_pred             HHhhhcCCCCCcccccccccccee--eeeEEeCCCCEEEEe
Q 010625          357 VKETMRLHPVVPLLIPRVAREDCK--VAGYDLLKNSRVLIN  395 (506)
Q Consensus       357 i~EtlRl~~~~~~~~~R~~~~d~~--l~g~~ip~G~~v~~~  395 (506)
                      ++|-+.|.+....-+-|.+.+++.  ++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            688999999887777687776655  589999999998874


No 41 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=39.31  E-value=7  Score=37.01  Aligned_cols=44  Identities=16%  Similarity=0.043  Sum_probs=33.9

Q ss_pred             ChhHHHHHHhhhcCCCCCccccccccccceeeeeEEeCCCCEEEEe
Q 010625          350 LPYIQAIVKETMRLHPVVPLLIPRVAREDCKVAGYDLLKNSRVLIN  395 (506)
Q Consensus       350 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~l~g~~ip~G~~v~~~  395 (506)
                      -..+.|||.|+.-+......-+  +..+|+.++|..||+||.|+-.
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vrl--RLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVKL--RLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEEEE--EEcCceeeCCEEecCCCEEEEE
Confidence            3458899999999886553321  3488999999999999988754


No 42 
>PHA03162 hypothetical protein; Provisional
Probab=35.52  E-value=34  Score=26.23  Aligned_cols=24  Identities=17%  Similarity=0.321  Sum_probs=20.4

Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHH
Q 010625          435 GSGRRMCLGYGLGLKLVQSSLANL  458 (506)
Q Consensus       435 g~G~r~C~G~~~A~~e~~~~la~l  458 (506)
                      ++|++.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999999988777765


No 43 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=33.07  E-value=92  Score=22.29  Aligned_cols=19  Identities=32%  Similarity=0.546  Sum_probs=16.4

Q ss_pred             CHHHHHHHHHHHhHhhcCC
Q 010625          321 NPEAIQKATEELDRVIGRD  339 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~~~~~  339 (506)
                      .|++++.+++||-++++..
T Consensus        35 ~p~~l~~lk~eil~VIsKY   53 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKRY   53 (87)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            5999999999999987653


No 44 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=32.94  E-value=43  Score=21.28  Aligned_cols=18  Identities=28%  Similarity=0.349  Sum_probs=15.5

Q ss_pred             hCCeEEEeecCeeEEEec
Q 010625           61 YGPLMHLKFGFDSVVVGS   78 (506)
Q Consensus        61 yG~v~~~~~~~~~~v~v~   78 (506)
                      =|++++++.||+.+.|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999999988873


No 45 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=32.57  E-value=2.1e+02  Score=21.29  Aligned_cols=60  Identities=23%  Similarity=0.238  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccccccCCCCChHHHHHHHhhhCCeEEEeec------CeeEEEecCHHHHHHHHHh
Q 010625           28 PNLPPGPKPWPIIGNLNLIGPLPHISIHSLSRKYGPLMHLKFG------FDSVVVGSSVEVAELLLKT   89 (506)
Q Consensus        28 ~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------~~~~v~v~dp~~v~~v~~~   89 (506)
                      .+.||-...+-++-|++  .+-..+-+.++.-+||+|..+.+|      |.-+||-.|-.+++..+.+
T Consensus        11 ~rlppevnriLyirNLp--~~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLP--FKITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCChhhheeEEEecCC--ccccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            33444433333334432  133456788899999999999887      5678888898888888875


No 46 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=32.26  E-value=60  Score=18.96  Aligned_cols=19  Identities=21%  Similarity=0.284  Sum_probs=12.7

Q ss_pred             HHHHHHHh-cCHHHHHHHHH
Q 010625          312 EWAMSLLL-KNPEAIQKATE  330 (506)
Q Consensus       312 ~~~l~~L~-~~p~~~~~lr~  330 (506)
                      -..+..++ +||++++.+++
T Consensus        16 ~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   16 QSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHhChhHHHHHHh
Confidence            33444444 89999888775


No 47 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=31.47  E-value=1.4e+02  Score=18.77  Aligned_cols=35  Identities=26%  Similarity=0.200  Sum_probs=25.1

Q ss_pred             HHHHHhhhCCeEEEeecC----eeEEEecCHHHHHHHHH
Q 010625           54 IHSLSRKYGPLMHLKFGF----DSVVVGSSVEVAELLLK   88 (506)
Q Consensus        54 ~~~~~~kyG~v~~~~~~~----~~~v~v~dp~~v~~v~~   88 (506)
                      +.++.++||+|..+.+..    .-+|-..+++.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            356788999998888544    34555578998888876


No 48 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=30.38  E-value=2e+02  Score=20.45  Aligned_cols=50  Identities=10%  Similarity=0.082  Sum_probs=41.2

Q ss_pred             ccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhh
Q 010625          287 IERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVI  336 (506)
Q Consensus       287 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  336 (506)
                      .+...........++-=+..++....-.+.+.++||+..+++.+.+.+-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34455566666778888999999999999999999999999999887644


No 49 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=29.44  E-value=2.2e+02  Score=26.13  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             HHHHHhcccCCCcccccccHHHHHHHHHHHhhhcccchHhHHHHHHHHHhcCHHHHHHHHHHHhHhhcCCCccccccCC-
Q 010625          270 MVDVLVQFADDPTLEVKIERHQLKAIIQDLLTAGTDTSALNVEWAMSLLLKNPEAIQKATEELDRVIGRDRWVQEKDIV-  348 (506)
Q Consensus       270 ~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~-  348 (506)
                      +.+.|...      +.+-+.+.|.+++..|-+.|.                +|...+.|.++-.-.+-.++.++...|+ 
T Consensus       332 Lrd~L~aL------~TPGtWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~GRInisGLN~  389 (410)
T KOG1412|consen  332 LRDHLVAL------KTPGTWDHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDGRINISGLNM  389 (410)
T ss_pred             HHHHHHhc------CCCCcHHHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCCcEeeecccc
Confidence            55555554      225678899999888878775                4566677766665555567778888875 


Q ss_pred             -CChhHHHHHHhhhcCCC
Q 010625          349 -NLPYIQAIVKETMRLHP  365 (506)
Q Consensus       349 -~lp~l~a~i~EtlRl~~  365 (506)
                       ++.|+-..|.|+.|-.+
T Consensus       390 ~NveyVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  390 KNVEYVAKAIDETVRAIK  407 (410)
T ss_pred             ccHHHHHHHHHHHHHhhc
Confidence             68999999999999765


No 50 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=28.86  E-value=1.5e+02  Score=28.97  Aligned_cols=39  Identities=13%  Similarity=0.111  Sum_probs=23.1

Q ss_pred             HhhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCCCCCC
Q 010625           58 SRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTHDLSFSS   96 (506)
Q Consensus        58 ~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~~~~~~~   96 (506)
                      .-+||.|++-.+.++.+-|=.-|+.-++-+..+...|+.
T Consensus       220 ~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  220 RGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             cCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            457888888777776655544444444444444445543


No 51 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=27.52  E-value=58  Score=25.37  Aligned_cols=24  Identities=17%  Similarity=0.325  Sum_probs=17.0

Q ss_pred             CCCCchhHHHHHHHHHHHHHhhcc
Q 010625          439 RMCLGYGLGLKLVQSSLANLLHGF  462 (506)
Q Consensus       439 r~C~G~~~A~~e~~~~la~ll~~f  462 (506)
                      ..|.|+.||+..+-.++..++..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            379999999999999999998753


No 52 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=27.07  E-value=1.2e+02  Score=23.68  Aligned_cols=41  Identities=20%  Similarity=0.174  Sum_probs=32.0

Q ss_pred             CCChHHHHHHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHhC
Q 010625           48 PLPHISIHSLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKTH   90 (506)
Q Consensus        48 ~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~~   90 (506)
                      .+....+++|.++||.+--.  .+..++...|++.++++...+
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            34567889999999987432  257788899999999998754


No 53 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.95  E-value=1.6e+02  Score=21.00  Aligned_cols=34  Identities=18%  Similarity=0.159  Sum_probs=27.3

Q ss_pred             HHHhhhCCeEEEeecCeeEEEecCHHHHHHHHHh
Q 010625           56 SLSRKYGPLMHLKFGFDSVVVGSSVEVAELLLKT   89 (506)
Q Consensus        56 ~~~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~   89 (506)
                      +--++||+|+.+.--.+..+.-++-+.++++..+
T Consensus        20 RqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          20 RQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             HHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            3447899998887666777788999999999875


No 54 
>PRK05933 type III secretion system protein; Validated
Probab=26.81  E-value=72  Score=29.09  Aligned_cols=43  Identities=19%  Similarity=0.169  Sum_probs=33.4

Q ss_pred             HHHHHHhhhcCCCCCcccccccc-cc--ceeeeeEEeCCCCEEEEe
Q 010625          353 IQAIVKETMRLHPVVPLLIPRVA-RE--DCKVAGYDLLKNSRVLIN  395 (506)
Q Consensus       353 l~a~i~EtlRl~~~~~~~~~R~~-~~--d~~l~g~~ip~G~~v~~~  395 (506)
                      ..--|+|.++|.+....-+-|.+ .+  |+.++|..|.+|..|.++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            45568999999998877665554 34  456699999999999875


No 55 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=26.70  E-value=42  Score=23.75  Aligned_cols=21  Identities=19%  Similarity=0.624  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHhhccccccCCC
Q 010625          449 KLVQSSLANLLHGFEWKLPGD  469 (506)
Q Consensus       449 ~e~~~~la~ll~~f~~~~~~~  469 (506)
                      .-|+-++..+|+-||+.|++-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            357899999999999999664


No 56 
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=26.39  E-value=1.3e+02  Score=21.72  Aligned_cols=19  Identities=21%  Similarity=0.513  Sum_probs=16.3

Q ss_pred             CHHHHHHHHHHHhHhhcCC
Q 010625          321 NPEAIQKATEELDRVIGRD  339 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~~~~~  339 (506)
                      .|+.++.+++||.++++..
T Consensus        33 sp~~l~~lk~eIl~VI~kY   51 (91)
T PRK13987         33 SPDVLEMIKEDILKVISKY   51 (91)
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            4999999999999988653


No 57 
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=25.65  E-value=50  Score=23.43  Aligned_cols=25  Identities=20%  Similarity=0.255  Sum_probs=18.8

Q ss_pred             CHHHHHHHHHHHhHhhcCCCccccc
Q 010625          321 NPEAIQKATEELDRVIGRDRWVQEK  345 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~~~~~~~~~~~  345 (506)
                      .|++.+.+++||-++++..-.++.+
T Consensus        36 ~p~~l~~lk~dil~VIsKYv~Id~~   60 (84)
T PRK13989         36 PPDYLPALQKELVAVISKYVKISPD   60 (84)
T ss_pred             CHHHHHHHHHHHHHHHHHheeeCcc
Confidence            5899999999999998764333333


No 58 
>PRK02302 hypothetical protein; Provisional
Probab=25.43  E-value=1.7e+02  Score=21.07  Aligned_cols=32  Identities=22%  Similarity=0.134  Sum_probs=26.1

Q ss_pred             HhhhCCeEEEeecCeeEEEecCHHHHHHHHHh
Q 010625           58 SRKYGPLMHLKFGFDSVVVGSSVEVAELLLKT   89 (506)
Q Consensus        58 ~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~   89 (506)
                      -++||+|+.+.=-...+++-.|.+.++++..+
T Consensus        23 LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         23 LSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            37899998887666777777899999999875


No 59 
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=24.35  E-value=63  Score=23.25  Aligned_cols=26  Identities=12%  Similarity=0.227  Sum_probs=18.8

Q ss_pred             CHHHHHHHHHHHhHhhcCCCcccccc
Q 010625          321 NPEAIQKATEELDRVIGRDRWVQEKD  346 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~~~~~~~~~~~~  346 (506)
                      .|++++.+++||-+++...-.++.++
T Consensus        41 ~pd~L~~lk~eIl~VI~KYv~Id~~~   66 (90)
T PRK13990         41 SSHLLAELKDEIIEVVKKYVALSEEN   66 (90)
T ss_pred             CHHHHHHHHHHHHHHHHHheecChhc
Confidence            47899999999999987644343333


No 60 
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=24.27  E-value=1.8e+02  Score=21.41  Aligned_cols=23  Identities=22%  Similarity=0.344  Sum_probs=17.9

Q ss_pred             cCHHHHHHHHHHHhHhhcCCCcc
Q 010625          320 KNPEAIQKATEELDRVIGRDRWV  342 (506)
Q Consensus       320 ~~p~~~~~lr~Ei~~~~~~~~~~  342 (506)
                      ..|+..+.+++||.++++..-.+
T Consensus        36 ~sp~~l~~mk~dIl~VIskYv~I   58 (97)
T PRK13988         36 LSPELLEQMRKEILEVVARYVEI   58 (97)
T ss_pred             CCHHHHHHHHHHHHHHHHHHeee
Confidence            34999999999999988754333


No 61 
>PRK02886 hypothetical protein; Provisional
Probab=22.86  E-value=2e+02  Score=20.54  Aligned_cols=32  Identities=19%  Similarity=0.261  Sum_probs=25.9

Q ss_pred             HhhhCCeEEEeecCeeEEEecCHHHHHHHHHh
Q 010625           58 SRKYGPLMHLKFGFDSVVVGSSVEVAELLLKT   89 (506)
Q Consensus        58 ~~kyG~v~~~~~~~~~~v~v~dp~~v~~v~~~   89 (506)
                      -++||+|..+.--...+++-.|.+.++++..+
T Consensus        21 LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         21 LRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            37899998887666777777899999999875


No 62 
>PF14824 Sirohm_synth_M:  Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=22.55  E-value=1.2e+02  Score=16.67  Aligned_cols=15  Identities=20%  Similarity=0.492  Sum_probs=11.4

Q ss_pred             CHHHHHHHHHHHhHh
Q 010625          321 NPEAIQKATEELDRV  335 (506)
Q Consensus       321 ~p~~~~~lr~Ei~~~  335 (506)
                      .|.+-.++|+||++.
T Consensus        15 sP~la~~iR~~ie~~   29 (30)
T PF14824_consen   15 SPRLARLIRKEIERL   29 (30)
T ss_dssp             -HHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHh
Confidence            478888899988764


No 63 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=22.24  E-value=1.3e+02  Score=17.79  Aligned_cols=28  Identities=32%  Similarity=0.419  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHhHhhcCCCccccccCCCChhHHHHHHhhhc
Q 010625          322 PEAIQKATEELDRVIGRDRWVQEKDIVNLPYIQAIVKETMR  362 (506)
Q Consensus       322 p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlR  362 (506)
                      .++.+.+|+|++.+=             -..++|+..|-.|
T Consensus        10 qEIL~EvrkEl~K~K-------------~EIIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKVK-------------EEIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-------------HHHHHHHHHHHhc
Confidence            467777777777651             1236777666554


No 64 
>PF15102 TMEM154:  TMEM154 protein family
Probab=21.74  E-value=83  Score=24.97  Aligned_cols=31  Identities=16%  Similarity=0.279  Sum_probs=0.0

Q ss_pred             hHHHHHHHHHHHHHHhhhhccCCCCCCCCCC
Q 010625            3 YSILLFLPVLLLFFRRHYYSRNPKKPNLPPG   33 (506)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg   33 (506)
                      +++++++++++.+++.++.+|+.+....-+|
T Consensus        65 ~VLLvlLLl~vV~lv~~~kRkr~K~~~ss~g   95 (146)
T PF15102_consen   65 LVLLVLLLLSVVCLVIYYKRKRTKQEPSSQG   95 (146)
T ss_pred             HHHHHHHHHHHHHheeEEeecccCCCCcccc


No 65 
>TIGR01215 minE cell division topological specificity factor MinE. This protein is involved in the process of cell division. This protein prevents the proteins MinC and MinD to inhibit cell division at internal sites, but allows inhibiton at polar sites. This allows for correct cell division at the proper sites.
Probab=20.12  E-value=2.3e+02  Score=19.95  Aligned_cols=20  Identities=25%  Similarity=0.378  Sum_probs=16.7

Q ss_pred             cCHHHHHHHHHHHhHhhcCC
Q 010625          320 KNPEAIQKATEELDRVIGRD  339 (506)
Q Consensus       320 ~~p~~~~~lr~Ei~~~~~~~  339 (506)
                      ..|+..+.+++||.++++..
T Consensus        33 ~~p~~l~~mk~dil~VIskY   52 (81)
T TIGR01215        33 LAPEYLEELRKEILEVISKY   52 (81)
T ss_pred             CCHHHHHHHHHHHHHHHHHh
Confidence            45899999999999987653


Done!