Query 010627
Match_columns 505
No_of_seqs 191 out of 1443
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:51:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010627.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010627hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4drs_A Pyruvate kinase; glycol 100.0 2E-138 5E-143 1113.4 54.5 480 5-505 34-526 (526)
2 3gr4_A Pyruvate kinase isozyme 100.0 9E-138 3E-142 1108.3 53.9 486 4-505 49-550 (550)
3 3khd_A Pyruvate kinase; malari 100.0 7E-138 2E-142 1102.9 49.4 472 12-505 43-520 (520)
4 3hqn_D Pyruvate kinase, PK; TI 100.0 3E-137 1E-141 1096.6 50.1 477 11-505 16-499 (499)
5 3gg8_A Pyruvate kinase; malari 100.0 9E-137 3E-141 1093.8 53.9 473 12-505 33-511 (511)
6 1e0t_A Pyruvate kinase, PK; ph 100.0 6E-134 2E-138 1067.9 50.1 465 14-504 1-470 (470)
7 3t05_A Pyruvate kinase, PK; te 100.0 5E-134 2E-138 1093.5 49.8 470 12-505 20-494 (606)
8 2e28_A Pyruvate kinase, PK; al 100.0 1E-130 4E-135 1070.5 52.6 467 14-504 2-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 2E-130 7E-135 1032.5 45.4 445 11-502 11-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 9E-130 3E-134 1044.1 45.5 477 12-504 16-500 (500)
11 1izc_A Macrophomate synthase i 99.7 1E-18 3.4E-23 179.7 7.3 147 191-353 108-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 2.8E-18 9.4E-23 171.1 -0.7 127 189-330 79-240 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 8E-17 2.7E-21 162.1 7.5 128 188-330 99-261 (287)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 3.7E-16 1.3E-20 155.3 9.5 127 191-331 79-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 8E-16 2.7E-20 152.3 11.1 127 189-330 80-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 5.1E-15 1.8E-19 148.6 11.3 132 187-326 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.4 1.5E-12 5E-17 133.1 9.9 135 181-327 116-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 2.1E-11 7E-16 124.3 11.1 139 180-326 106-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.1 9.3E-11 3.2E-15 117.1 9.5 124 187-326 71-208 (273)
20 3qqw_A Putative citrate lyase; 99.1 1E-10 3.4E-15 119.9 9.3 132 187-326 95-254 (332)
21 2ols_A Phosphoenolpyruvate syn 99.1 9.1E-11 3.1E-15 132.8 9.8 134 185-329 622-779 (794)
22 3r4i_A Citrate lyase; TIM beta 99.0 4.7E-10 1.6E-14 115.3 10.0 130 189-326 96-253 (339)
23 2hwg_A Phosphoenolpyruvate-pro 99.0 5.5E-10 1.9E-14 121.9 10.9 135 183-329 367-528 (575)
24 2wqd_A Phosphoenolpyruvate-pro 99.0 6.6E-10 2.2E-14 121.2 10.1 133 183-327 369-528 (572)
25 3oyz_A Malate synthase; TIM ba 98.9 3.8E-09 1.3E-13 110.6 9.6 133 186-326 94-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.4 3.7E-07 1.3E-11 103.9 8.5 136 183-329 680-862 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.3 1E-06 3.5E-11 100.3 8.4 135 183-329 673-856 (873)
28 3cuz_A MSA, malate synthase A; 97.8 5.9E-05 2E-09 81.2 11.1 121 202-326 207-365 (532)
29 3cux_A Malate synthase; TIM ba 97.7 8.3E-05 2.9E-09 80.0 9.8 121 199-327 202-364 (528)
30 1p7t_A MSG, malate synthase G; 97.7 7E-05 2.4E-09 82.3 8.1 131 190-326 372-535 (731)
31 1h6z_A Pyruvate phosphate diki 97.4 0.0007 2.4E-08 77.2 12.3 139 180-329 697-882 (913)
32 2x0s_A Pyruvate phosphate diki 96.4 0.019 6.5E-07 65.9 12.6 114 204-328 727-881 (913)
33 3odm_A Pepcase, PEPC, phosphoe 94.9 0.042 1.4E-06 58.9 7.5 91 200-290 138-258 (560)
34 4af0_A Inosine-5'-monophosphat 94.7 0.28 9.5E-06 52.8 13.0 125 186-327 279-413 (556)
35 1t57_A Conserved protein MTH16 94.0 1 3.5E-05 42.2 13.7 115 373-493 35-174 (206)
36 1jqo_A Phosphoenolpyruvate car 94.0 0.14 4.7E-06 58.8 9.3 97 195-291 519-637 (970)
37 1vp8_A Hypothetical protein AF 94.0 1.3 4.4E-05 41.5 14.2 117 373-493 27-167 (201)
38 3f4w_A Putative hexulose 6 pho 93.9 0.13 4.3E-06 48.0 7.7 133 195-348 71-208 (211)
39 1ydn_A Hydroxymethylglutaryl-C 93.5 1.2 4E-05 44.0 14.3 155 185-349 23-196 (295)
40 4fo4_A Inosine 5'-monophosphat 93.4 1.1 3.8E-05 46.0 14.2 122 188-327 108-240 (366)
41 3ble_A Citramalate synthase fr 93.0 1.7 5.8E-05 43.9 14.8 160 184-350 37-211 (337)
42 3ffs_A Inosine-5-monophosphate 93.0 0.59 2E-05 48.6 11.5 119 191-327 147-275 (400)
43 3khj_A Inosine-5-monophosphate 92.8 1 3.4E-05 46.2 12.8 120 190-327 107-236 (361)
44 4fxs_A Inosine-5'-monophosphat 92.6 0.86 3E-05 48.6 12.5 124 187-327 230-363 (496)
45 3usb_A Inosine-5'-monophosphat 92.5 0.96 3.3E-05 48.5 12.7 125 187-327 255-388 (511)
46 4avf_A Inosine-5'-monophosphat 92.3 0.78 2.7E-05 48.9 11.7 124 187-327 228-361 (490)
47 1jqn_A Pepcase, PEPC, phosphoe 92.2 0.25 8.4E-06 56.3 7.9 92 200-291 467-577 (883)
48 1p1x_A Deoxyribose-phosphate a 92.2 0.93 3.2E-05 44.4 11.1 151 182-350 22-193 (260)
49 2z6i_A Trans-2-enoyl-ACP reduc 92.1 0.81 2.8E-05 46.0 11.0 107 195-327 82-191 (332)
50 2ftp_A Hydroxymethylglutaryl-C 91.6 3.2 0.00011 41.1 14.6 159 184-349 26-200 (302)
51 1ydo_A HMG-COA lyase; TIM-barr 91.5 4.1 0.00014 40.6 15.3 162 184-349 24-198 (307)
52 1w8s_A FBP aldolase, fructose- 91.3 2.8 9.7E-05 40.8 13.5 69 195-266 166-239 (263)
53 3ovp_A Ribulose-phosphate 3-ep 90.9 0.64 2.2E-05 44.5 8.3 135 195-350 81-220 (228)
54 1jcn_A Inosine monophosphate d 90.8 2.4 8.1E-05 45.2 13.5 120 189-328 256-388 (514)
55 3bo9_A Putative nitroalkan dio 90.6 1.8 6.1E-05 43.5 11.7 112 191-327 93-205 (326)
56 1h1y_A D-ribulose-5-phosphate 90.5 1.1 3.9E-05 42.3 9.7 135 195-348 81-222 (228)
57 1vcv_A Probable deoxyribose-ph 90.2 0.58 2E-05 44.9 7.3 148 182-351 11-182 (226)
58 2cw6_A Hydroxymethylglutaryl-C 90.2 2.1 7.3E-05 42.3 11.7 162 184-350 23-198 (298)
59 3ctl_A D-allulose-6-phosphate 90.1 1.2 4.2E-05 42.7 9.5 137 195-348 74-218 (231)
60 3inp_A D-ribulose-phosphate 3- 90.1 0.52 1.8E-05 45.8 6.9 138 192-347 101-243 (246)
61 3r2g_A Inosine 5'-monophosphat 89.9 1.7 5.9E-05 44.5 10.9 119 187-327 99-228 (361)
62 3cu2_A Ribulose-5-phosphate 3- 89.6 1.5 5.2E-05 42.2 9.7 134 195-346 86-235 (237)
63 2qjg_A Putative aldolase MJ040 89.6 2.8 9.4E-05 40.5 11.8 45 30-74 102-148 (273)
64 3eeg_A 2-isopropylmalate synth 89.1 7.1 0.00024 39.2 14.7 159 184-350 24-193 (325)
65 2fli_A Ribulose-phosphate 3-ep 89.0 1.5 5E-05 40.9 9.0 135 195-346 78-217 (220)
66 4g9p_A 4-hydroxy-3-methylbut-2 88.8 1.7 5.7E-05 45.1 9.8 152 190-349 41-221 (406)
67 1n7k_A Deoxyribose-phosphate a 88.7 1.1 3.8E-05 43.2 7.9 142 183-348 31-192 (234)
68 3bw2_A 2-nitropropane dioxygen 88.5 4.4 0.00015 41.1 12.9 112 191-327 113-237 (369)
69 1y0e_A Putative N-acetylmannos 88.0 3.1 0.0001 38.7 10.5 136 190-345 78-219 (223)
70 3rmj_A 2-isopropylmalate synth 88.0 21 0.00073 36.4 17.7 159 184-350 30-199 (370)
71 3ewb_X 2-isopropylmalate synth 87.9 22 0.00075 35.0 17.2 197 184-400 23-232 (293)
72 1gte_A Dihydropyrimidine dehyd 87.7 2.3 7.7E-05 49.3 11.2 127 187-328 647-817 (1025)
73 3ajx_A 3-hexulose-6-phosphate 87.6 2.1 7E-05 39.5 8.9 131 195-345 71-204 (207)
74 3igs_A N-acetylmannosamine-6-p 87.5 4.3 0.00015 38.7 11.3 135 190-349 91-229 (232)
75 1tqj_A Ribulose-phosphate 3-ep 87.4 0.72 2.5E-05 44.0 5.8 134 195-345 79-219 (230)
76 1ub3_A Aldolase protein; schif 87.4 1.3 4.6E-05 42.2 7.6 145 183-347 14-173 (220)
77 2gjl_A Hypothetical protein PA 87.3 3.2 0.00011 41.4 10.8 113 192-327 88-201 (328)
78 1w8s_A FBP aldolase, fructose- 87.0 5 0.00017 39.0 11.7 128 186-327 39-179 (263)
79 2c6q_A GMP reductase 2; TIM ba 86.7 3.2 0.00011 42.2 10.5 124 188-328 118-253 (351)
80 1yad_A Regulatory protein TENI 86.7 5.5 0.00019 37.0 11.5 132 195-348 82-213 (221)
81 1zco_A 2-dehydro-3-deoxyphosph 86.0 3.7 0.00013 40.1 10.1 122 195-340 44-179 (262)
82 1eep_A Inosine 5'-monophosphat 85.7 3.6 0.00012 42.4 10.4 119 189-326 154-284 (404)
83 1mzh_A Deoxyribose-phosphate a 84.2 5.6 0.00019 37.6 10.2 145 183-345 15-170 (225)
84 4e38_A Keto-hydroxyglutarate-a 83.4 5.2 0.00018 38.4 9.6 104 205-326 37-153 (232)
85 3qja_A IGPS, indole-3-glycerol 82.7 5.8 0.0002 38.8 9.9 129 192-344 127-259 (272)
86 3ngj_A Deoxyribose-phosphate a 82.7 4.9 0.00017 38.8 9.1 149 183-347 38-197 (239)
87 1vhc_A Putative KHG/KDPG aldol 82.5 8.8 0.0003 36.4 10.8 109 186-326 27-136 (224)
88 3oa3_A Aldolase; structural ge 82.2 4.2 0.00014 40.3 8.6 149 183-349 69-230 (288)
89 1tqx_A D-ribulose-5-phosphate 82.0 5.1 0.00017 38.2 9.0 128 202-348 86-222 (227)
90 3nvt_A 3-deoxy-D-arabino-heptu 81.9 6.4 0.00022 40.6 10.3 109 195-327 163-283 (385)
91 1f76_A Dihydroorotate dehydrog 81.6 9.7 0.00033 37.9 11.4 119 195-327 160-318 (336)
92 1mxs_A KDPG aldolase; 2-keto-3 81.4 12 0.00041 35.5 11.4 109 186-326 36-145 (225)
93 3r12_A Deoxyribose-phosphate a 81.1 5.5 0.00019 38.9 8.9 147 183-347 54-213 (260)
94 1ypf_A GMP reductase; GUAC, pu 81.0 5.2 0.00018 40.2 9.1 118 186-327 104-239 (336)
95 1vrd_A Inosine-5'-monophosphat 81.0 13 0.00044 39.1 12.6 118 190-327 239-369 (494)
96 2yw3_A 4-hydroxy-2-oxoglutarat 80.8 11 0.00037 35.1 10.7 105 188-326 25-130 (207)
97 3q58_A N-acetylmannosamine-6-p 80.6 9.5 0.00032 36.2 10.4 131 190-345 91-225 (229)
98 1rpx_A Protein (ribulose-phosp 80.2 7.2 0.00025 36.5 9.3 136 192-345 83-225 (230)
99 1geq_A Tryptophan synthase alp 80.1 10 0.00035 35.8 10.5 119 191-327 99-220 (248)
100 3jr2_A Hexulose-6-phosphate sy 80.0 1.9 6.6E-05 40.4 5.2 132 195-348 77-214 (218)
101 1xi3_A Thiamine phosphate pyro 79.1 9.8 0.00034 34.7 9.7 126 195-348 80-211 (215)
102 1nvm_A HOA, 4-hydroxy-2-oxoval 79.1 29 0.00099 34.8 14.0 151 184-350 26-191 (345)
103 1vzw_A Phosphoribosyl isomeras 78.8 2.7 9.3E-05 39.7 5.9 129 189-335 33-174 (244)
104 1jub_A Dihydroorotate dehydrog 78.6 13 0.00044 36.4 11.0 127 187-327 105-271 (311)
105 3g8r_A Probable spore coat pol 77.7 11 0.00037 38.4 10.2 96 213-336 77-174 (350)
106 3nav_A Tryptophan synthase alp 77.6 8.6 0.0003 37.7 9.2 114 195-327 119-237 (271)
107 1zfj_A Inosine monophosphate d 77.4 25 0.00084 36.9 13.4 124 188-327 233-365 (491)
108 3vnd_A TSA, tryptophan synthas 77.4 7.4 0.00025 38.0 8.6 114 195-327 117-235 (267)
109 3ivs_A Homocitrate synthase, m 77.3 72 0.0025 33.1 16.7 155 184-349 57-221 (423)
110 1wbh_A KHG/KDPG aldolase; lyas 77.2 22 0.00074 33.3 11.6 109 186-326 26-135 (214)
111 2cu0_A Inosine-5'-monophosphat 76.9 21 0.00071 37.6 12.6 119 190-328 230-358 (486)
112 2qjg_A Putative aldolase MJ040 76.5 33 0.0011 32.7 13.0 132 192-349 104-259 (273)
113 2qr6_A IMP dehydrogenase/GMP r 76.2 10 0.00034 38.8 9.7 114 195-328 172-307 (393)
114 2wqp_A Polysialic acid capsule 76.0 25 0.00085 35.7 12.3 119 190-337 38-188 (349)
115 1me8_A Inosine-5'-monophosphat 76.0 18 0.00063 38.2 12.0 117 195-327 248-381 (503)
116 1vs1_A 3-deoxy-7-phosphoheptul 75.1 19 0.00064 35.3 10.9 106 213-342 88-196 (276)
117 1thf_D HISF protein; thermophI 74.8 8 0.00027 36.5 8.0 133 190-343 86-241 (253)
118 3kws_A Putative sugar isomeras 74.7 38 0.0013 32.0 13.0 128 188-317 38-188 (287)
119 2a4a_A Deoxyribose-phosphate a 74.2 6.7 0.00023 38.7 7.3 151 183-350 43-215 (281)
120 1wa3_A 2-keto-3-deoxy-6-phosph 74.2 11 0.00037 34.4 8.5 108 186-327 20-131 (205)
121 3ndo_A Deoxyribose-phosphate a 73.3 11 0.00037 36.2 8.4 152 183-347 24-187 (231)
122 1ka9_F Imidazole glycerol phos 73.2 11 0.00039 35.4 8.6 134 190-343 87-242 (252)
123 3o63_A Probable thiamine-phosp 73.2 13 0.00045 35.7 9.0 123 196-349 107-241 (243)
124 1wv2_A Thiazole moeity, thiazo 72.9 71 0.0024 31.1 14.0 144 186-349 85-238 (265)
125 3tha_A Tryptophan synthase alp 71.6 18 0.00061 35.1 9.6 113 195-327 110-227 (252)
126 1h1y_A D-ribulose-5-phosphate 71.5 27 0.00094 32.6 10.8 130 191-347 23-168 (228)
127 1ep3_A Dihydroorotate dehydrog 71.5 17 0.00057 35.4 9.6 127 187-329 110-272 (311)
128 3i65_A Dihydroorotate dehydrog 71.3 9.6 0.00033 39.7 8.1 99 183-288 278-402 (415)
129 3tsm_A IGPS, indole-3-glycerol 71.0 30 0.001 33.8 11.2 127 192-344 134-266 (272)
130 3cqj_A L-ribulose-5-phosphate 70.0 23 0.00079 33.7 10.2 43 189-231 31-83 (295)
131 2tps_A Protein (thiamin phosph 69.8 31 0.0011 31.6 10.7 127 195-349 88-222 (227)
132 2v82_A 2-dehydro-3-deoxy-6-pho 69.7 26 0.00089 32.0 10.1 127 192-351 72-204 (212)
133 1q6o_A Humps, 3-keto-L-gulonat 69.3 13 0.00045 34.5 7.9 134 197-348 76-212 (216)
134 1at0_A 17-hedgehog; developmen 69.2 22 0.00076 31.1 9.0 63 96-165 58-132 (145)
135 4fxs_A Inosine-5'-monophosphat 69.0 7.4 0.00025 41.4 6.8 51 16-66 219-269 (496)
136 3vnd_A TSA, tryptophan synthas 68.7 9.1 0.00031 37.4 6.9 90 190-290 35-152 (267)
137 2ekc_A AQ_1548, tryptophan syn 68.6 19 0.00065 34.7 9.1 115 195-327 116-234 (262)
138 3qja_A IGPS, indole-3-glycerol 67.6 17 0.00058 35.5 8.6 109 189-328 73-190 (272)
139 3s5o_A 4-hydroxy-2-oxoglutarat 67.5 29 0.00098 34.3 10.4 95 195-292 42-148 (307)
140 3lab_A Putative KDPG (2-keto-3 66.8 34 0.0012 32.4 10.2 38 276-327 96-139 (217)
141 3daq_A DHDPS, dihydrodipicolin 66.4 30 0.001 33.9 10.2 97 192-292 27-134 (292)
142 1yxy_A Putative N-acetylmannos 66.4 25 0.00087 32.7 9.3 128 190-346 91-231 (234)
143 3fkr_A L-2-keto-3-deoxyarabona 66.2 20 0.00068 35.5 8.9 98 192-292 33-143 (309)
144 3zwt_A Dihydroorotate dehydrog 65.9 19 0.00065 36.7 8.9 98 184-288 230-355 (367)
145 3m47_A Orotidine 5'-phosphate 65.6 5.8 0.0002 37.7 4.7 127 195-347 85-222 (228)
146 3q58_A N-acetylmannosamine-6-p 65.5 37 0.0013 32.1 10.3 113 185-326 33-155 (229)
147 4fo4_A Inosine 5'-monophosphat 65.5 11 0.00037 38.6 6.9 49 18-66 98-146 (366)
148 3igs_A N-acetylmannosamine-6-p 64.8 48 0.0016 31.3 11.0 113 185-326 33-155 (232)
149 3b4u_A Dihydrodipicolinate syn 64.5 41 0.0014 32.9 10.8 100 190-292 26-139 (294)
150 1qop_A Tryptophan synthase alp 64.4 19 0.00064 34.8 8.2 117 192-327 114-234 (268)
151 2h6r_A Triosephosphate isomera 64.1 12 0.00041 35.2 6.5 129 196-343 77-215 (219)
152 1h5y_A HISF; histidine biosynt 63.7 19 0.00064 33.4 7.9 115 191-328 90-228 (253)
153 3qze_A DHDPS, dihydrodipicolin 63.3 27 0.00093 34.6 9.3 97 192-292 48-155 (314)
154 1vzw_A Phosphoribosyl isomeras 63.1 8.8 0.0003 36.1 5.4 116 190-328 87-223 (244)
155 2v82_A 2-dehydro-3-deoxy-6-pho 62.9 47 0.0016 30.2 10.4 106 189-326 20-127 (212)
156 3glc_A Aldolase LSRF; TIM barr 62.2 50 0.0017 32.6 10.9 129 195-349 132-279 (295)
157 2nv1_A Pyridoxal biosynthesis 62.1 41 0.0014 32.9 10.3 121 195-346 35-170 (305)
158 3zwt_A Dihydroorotate dehydrog 61.6 40 0.0014 34.3 10.3 116 201-328 176-328 (367)
159 3khj_A Inosine-5-monophosphate 61.3 11 0.00038 38.3 6.1 46 19-66 98-143 (361)
160 3ngf_A AP endonuclease, family 60.8 62 0.0021 30.3 11.1 125 186-317 21-175 (269)
161 3dwg_A Cysteine synthase B; su 60.3 52 0.0018 32.5 10.8 117 276-418 86-210 (325)
162 1eep_A Inosine 5'-monophosphat 60.1 11 0.00036 38.8 5.8 50 17-66 142-191 (404)
163 1xky_A Dihydrodipicolinate syn 60.0 43 0.0015 32.9 10.0 97 192-292 37-144 (301)
164 3m5v_A DHDPS, dihydrodipicolin 59.9 33 0.0011 33.7 9.2 94 195-292 35-140 (301)
165 1ujp_A Tryptophan synthase alp 59.1 17 0.00057 35.5 6.7 114 195-327 113-229 (271)
166 2y88_A Phosphoribosyl isomeras 58.7 16 0.00056 34.1 6.5 115 190-327 86-225 (244)
167 3exr_A RMPD (hexulose-6-phosph 58.4 47 0.0016 31.0 9.6 133 197-348 78-217 (221)
168 1f6k_A N-acetylneuraminate lya 58.3 67 0.0023 31.3 11.1 99 190-292 26-136 (293)
169 2e6f_A Dihydroorotate dehydrog 58.2 19 0.00066 35.2 7.1 128 188-328 106-274 (314)
170 1tv5_A Dhodehase, dihydroorota 57.8 24 0.0008 37.0 8.0 99 183-288 306-430 (443)
171 3l21_A DHDPS, dihydrodipicolin 57.6 28 0.00097 34.3 8.2 97 192-292 40-147 (304)
172 2wkj_A N-acetylneuraminate lya 57.0 51 0.0018 32.4 10.0 97 192-292 36-144 (303)
173 2k8i_A SLYD, peptidyl-prolyl C 56.5 45 0.0015 30.2 8.7 60 97-158 51-118 (171)
174 1vr6_A Phospho-2-dehydro-3-deo 56.4 75 0.0026 32.2 11.2 108 195-326 127-246 (350)
175 4eiv_A Deoxyribose-phosphate a 56.0 32 0.0011 34.1 8.1 155 183-350 37-209 (297)
176 2y88_A Phosphoribosyl isomeras 56.0 17 0.00059 33.9 6.1 69 189-263 32-108 (244)
177 3hgm_A Universal stress protei 55.9 17 0.00059 30.3 5.6 41 377-418 98-147 (147)
178 2ehh_A DHDPS, dihydrodipicolin 55.9 53 0.0018 32.1 9.8 97 192-292 25-132 (294)
179 3dx5_A Uncharacterized protein 55.6 86 0.0029 29.3 11.1 123 190-317 17-162 (286)
180 2yxg_A DHDPS, dihydrodipicolin 55.4 49 0.0017 32.2 9.5 97 192-292 25-132 (289)
181 1jcn_A Inosine monophosphate d 55.3 13 0.00045 39.3 5.7 50 17-66 244-293 (514)
182 3usb_A Inosine-5'-monophosphat 55.2 15 0.00052 39.1 6.1 50 16-65 244-293 (511)
183 3si9_A DHDPS, dihydrodipicolin 54.3 35 0.0012 33.9 8.3 98 191-292 46-154 (315)
184 2z08_A Universal stress protei 54.2 27 0.00092 28.9 6.5 41 377-418 87-136 (137)
185 2czd_A Orotidine 5'-phosphate 54.1 39 0.0013 31.0 8.1 124 195-347 72-205 (208)
186 1y0e_A Putative N-acetylmannos 54.0 1.3E+02 0.0044 27.3 13.7 114 186-327 21-146 (223)
187 2v9d_A YAGE; dihydrodipicolini 53.9 36 0.0012 34.3 8.4 99 190-292 54-163 (343)
188 2nx9_A Oxaloacetate decarboxyl 53.8 1.5E+02 0.0053 31.0 13.5 186 184-399 26-235 (464)
189 3e96_A Dihydrodipicolinate syn 53.5 48 0.0016 32.8 9.2 97 192-292 37-143 (316)
190 3ndz_A Endoglucanase D; cellot 53.5 28 0.00097 34.7 7.5 58 24-83 39-106 (345)
191 3ks6_A Glycerophosphoryl diest 53.2 41 0.0014 31.9 8.3 106 203-347 134-245 (250)
192 3bo9_A Putative nitroalkan dio 53.1 1.7E+02 0.0059 28.7 13.3 111 189-328 39-152 (326)
193 4avf_A Inosine-5'-monophosphat 53.1 17 0.0006 38.4 6.1 51 16-66 217-267 (490)
194 3noy_A 4-hydroxy-3-methylbut-2 52.6 2E+02 0.0069 29.2 13.5 142 189-349 48-202 (366)
195 2r8w_A AGR_C_1641P; APC7498, d 52.2 52 0.0018 32.9 9.2 99 190-292 57-166 (332)
196 3cpr_A Dihydrodipicolinate syn 51.9 67 0.0023 31.5 9.9 99 190-292 39-148 (304)
197 1ub3_A Aldolase protein; schif 51.8 54 0.0019 30.9 8.8 119 286-418 52-182 (220)
198 3flu_A DHDPS, dihydrodipicolin 51.8 60 0.0021 31.7 9.5 96 193-292 33-139 (297)
199 2zbt_A Pyridoxal biosynthesis 51.6 17 0.00057 35.5 5.4 139 190-348 90-259 (297)
200 2ztj_A Homocitrate synthase; ( 51.5 2.1E+02 0.007 29.0 19.1 155 184-349 21-185 (382)
201 2rfg_A Dihydrodipicolinate syn 51.4 48 0.0016 32.5 8.7 97 192-292 25-132 (297)
202 3rcm_A TATD family hydrolase; 51.3 53 0.0018 32.0 8.9 103 188-293 17-134 (287)
203 1vli_A Spore coat polysacchari 51.2 47 0.0016 34.1 8.8 88 214-326 101-191 (385)
204 2kfw_A FKBP-type peptidyl-prol 51.2 25 0.00084 32.7 6.1 61 96-158 50-118 (196)
205 2w6r_A Imidazole glycerol phos 51.2 51 0.0017 31.1 8.7 129 190-336 86-238 (266)
206 3hgj_A Chromate reductase; TIM 50.7 90 0.0031 31.2 10.8 127 184-327 141-318 (349)
207 2vc6_A MOSA, dihydrodipicolina 50.5 55 0.0019 31.9 9.0 95 193-291 26-131 (292)
208 3t05_A Pyruvate kinase, PK; te 50.5 1.8E+02 0.0062 31.6 13.6 133 139-285 159-358 (606)
209 3i65_A Dihydroorotate dehydrog 50.2 80 0.0027 32.7 10.4 87 229-327 268-374 (415)
210 3tak_A DHDPS, dihydrodipicolin 50.1 78 0.0027 30.8 10.0 97 192-292 26-133 (291)
211 1tvn_A Cellulase, endoglucanas 50.0 30 0.001 33.2 6.9 54 27-82 38-101 (293)
212 3dz1_A Dihydrodipicolinate syn 49.9 84 0.0029 30.9 10.2 96 191-292 32-140 (313)
213 1kbi_A Cytochrome B2, L-LCR; f 49.8 64 0.0022 34.3 9.9 96 212-328 331-433 (511)
214 1mjh_A Protein (ATP-binding do 49.5 34 0.0012 29.1 6.5 41 377-418 108-157 (162)
215 2xio_A Putative deoxyribonucle 49.4 38 0.0013 32.9 7.5 104 188-293 27-147 (301)
216 1o5k_A DHDPS, dihydrodipicolin 49.2 61 0.0021 31.8 9.1 97 192-292 37-144 (306)
217 3tnj_A Universal stress protei 49.0 26 0.00088 29.4 5.6 41 377-418 97-145 (150)
218 3m5v_A DHDPS, dihydrodipicolin 48.8 96 0.0033 30.3 10.5 91 252-352 42-135 (301)
219 3nbm_A PTS system, lactose-spe 48.5 8.8 0.0003 32.3 2.3 62 215-291 22-83 (108)
220 3qfe_A Putative dihydrodipicol 48.3 68 0.0023 31.8 9.3 95 195-292 39-145 (318)
221 2gjl_A Hypothetical protein PA 47.9 1.4E+02 0.0049 29.1 11.7 115 189-331 28-149 (328)
222 3icg_A Endoglucanase D; cellul 47.6 36 0.0012 35.9 7.6 55 27-83 45-109 (515)
223 1mdl_A Mandelate racemase; iso 47.6 40 0.0014 33.6 7.6 60 16-80 133-196 (359)
224 3cgm_A SLYD, peptidyl-prolyl C 47.5 93 0.0032 27.6 9.2 60 97-158 46-114 (158)
225 4djd_D C/Fe-SP, corrinoid/iron 47.2 1E+02 0.0036 30.7 10.4 149 187-349 141-316 (323)
226 4af0_A Inosine-5'-monophosphat 46.9 15 0.00051 39.5 4.3 51 16-66 269-319 (556)
227 4ef8_A Dihydroorotate dehydrog 46.8 59 0.002 32.9 8.7 128 187-327 138-306 (354)
228 3qc0_A Sugar isomerase; TIM ba 46.7 30 0.001 32.2 6.2 104 188-291 18-141 (275)
229 1aj0_A DHPS, dihydropteroate s 46.7 70 0.0024 31.3 8.9 69 15-85 13-102 (282)
230 1o66_A 3-methyl-2-oxobutanoate 46.5 1.7E+02 0.0058 28.5 11.6 131 184-327 21-181 (275)
231 1jub_A Dihydroorotate dehydrog 46.4 87 0.003 30.4 9.7 99 186-288 170-299 (311)
232 3na8_A Putative dihydrodipicol 46.4 52 0.0018 32.6 8.1 96 193-292 50-156 (315)
233 2kr7_A FKBP-type peptidyl-prol 46.1 1E+02 0.0036 26.9 9.2 60 97-158 56-123 (151)
234 3l55_A B-1,4-endoglucanase/cel 45.9 36 0.0012 34.3 6.9 57 24-82 49-113 (353)
235 2gou_A Oxidoreductase, FMN-bin 45.8 1E+02 0.0035 31.1 10.3 122 184-327 150-322 (365)
236 3pc3_A CG1753, isoform A; CBS, 45.7 75 0.0026 33.5 9.7 123 276-418 126-254 (527)
237 1vyr_A Pentaerythritol tetrani 45.7 1.2E+02 0.0042 30.5 10.9 122 184-327 150-323 (364)
238 3l6b_A Serine racemase; pyrido 45.4 2.2E+02 0.0076 28.1 12.7 114 276-418 89-209 (346)
239 3h5d_A DHDPS, dihydrodipicolin 45.3 54 0.0019 32.4 8.0 95 194-292 34-140 (311)
240 1vrd_A Inosine-5'-monophosphat 44.7 24 0.00083 37.0 5.6 48 19-66 228-275 (494)
241 3fdx_A Putative filament prote 44.6 42 0.0014 27.7 6.2 42 376-418 93-142 (143)
242 2wkj_A N-acetylneuraminate lya 44.6 1.7E+02 0.0058 28.5 11.5 95 246-351 39-137 (303)
243 1egz_A Endoglucanase Z, EGZ, C 44.5 31 0.0011 33.0 6.0 53 27-81 38-98 (291)
244 3gr4_A Pyruvate kinase isozyme 44.5 1.6E+02 0.0054 31.7 11.8 150 117-284 191-406 (550)
245 4dt4_A FKBP-type 16 kDa peptid 44.4 1E+02 0.0036 27.7 9.1 61 97-159 74-143 (169)
246 3glc_A Aldolase LSRF; TIM barr 44.3 63 0.0022 31.8 8.2 155 241-418 71-229 (295)
247 3oix_A Putative dihydroorotate 44.3 73 0.0025 32.1 8.9 131 186-329 139-306 (345)
248 3d0c_A Dihydrodipicolinate syn 44.1 64 0.0022 31.9 8.3 99 190-292 35-143 (314)
249 3s3t_A Nucleotide-binding prot 44.1 39 0.0013 28.0 6.0 42 376-418 94-145 (146)
250 1qpo_A Quinolinate acid phosph 44.1 30 0.001 34.0 5.8 64 190-259 204-270 (284)
251 2ojp_A DHDPS, dihydrodipicolin 43.9 47 0.0016 32.4 7.2 99 190-292 24-133 (292)
252 3ipw_A Hydrolase TATD family p 43.9 33 0.0011 34.3 6.2 106 187-293 51-175 (325)
253 3vav_A 3-methyl-2-oxobutanoate 43.8 2.4E+02 0.0082 27.5 12.6 94 183-290 32-146 (275)
254 1rpx_A Protein (ribulose-phosp 43.8 78 0.0027 29.2 8.5 112 190-327 26-147 (230)
255 2dum_A Hypothetical protein PH 43.7 46 0.0016 28.6 6.5 41 377-418 105-154 (170)
256 1yxy_A Putative N-acetylmannos 43.6 1.1E+02 0.0039 28.1 9.6 117 183-328 29-163 (234)
257 1rqb_A Transcarboxylase 5S sub 43.3 2.5E+02 0.0084 30.1 13.2 187 184-400 43-255 (539)
258 1tq8_A Hypothetical protein RV 43.1 41 0.0014 29.2 6.1 41 377-418 107-156 (163)
259 1edg_A Endoglucanase A; family 43.1 47 0.0016 33.3 7.3 57 25-83 59-124 (380)
260 4adt_A Pyridoxine biosynthetic 43.0 1.1E+02 0.0038 30.1 9.8 171 189-395 30-237 (297)
261 3lmz_A Putative sugar isomeras 42.8 1.1E+02 0.0039 28.2 9.6 43 189-231 31-78 (257)
262 1f76_A Dihydroorotate dehydrog 42.7 35 0.0012 33.7 6.2 73 185-262 222-322 (336)
263 3l5l_A Xenobiotic reductase A; 42.6 1.1E+02 0.0038 30.7 10.1 130 184-327 147-325 (363)
264 1ko7_A HPR kinase/phosphatase; 42.6 26 0.00088 35.0 5.1 84 229-334 49-157 (314)
265 2gdq_A YITF; mandelate racemas 42.5 76 0.0026 32.0 8.8 46 32-80 146-191 (382)
266 2nuw_A 2-keto-3-deoxygluconate 42.5 1.7E+02 0.0057 28.3 11.0 98 190-292 22-129 (288)
267 3tsm_A IGPS, indole-3-glycerol 42.5 1.4E+02 0.0046 29.1 10.2 108 189-327 80-196 (272)
268 3ctl_A D-allulose-6-phosphate 42.4 1.8E+02 0.0061 27.3 10.9 124 195-345 20-156 (231)
269 1i60_A IOLI protein; beta barr 42.3 1.6E+02 0.0056 26.9 10.7 41 189-229 15-61 (278)
270 1vc4_A Indole-3-glycerol phosp 41.8 50 0.0017 31.6 7.0 128 192-343 120-252 (254)
271 3sz8_A 2-dehydro-3-deoxyphosph 41.7 82 0.0028 31.0 8.5 111 197-331 47-172 (285)
272 1rd5_A Tryptophan synthase alp 41.6 91 0.0031 29.5 8.8 114 197-327 114-230 (262)
273 2ovl_A Putative racemase; stru 41.3 42 0.0015 33.7 6.6 61 17-80 134-198 (371)
274 3nav_A Tryptophan synthase alp 41.1 76 0.0026 30.8 8.2 90 190-290 37-154 (271)
275 3ffs_A Inosine-5-monophosphate 40.9 25 0.00087 36.3 4.9 43 21-65 139-181 (400)
276 2uva_G Fatty acid synthase bet 40.4 44 0.0015 41.6 7.6 119 191-326 657-794 (2060)
277 3kts_A Glycerol uptake operon 40.4 2.1E+02 0.007 26.4 10.6 142 230-418 10-156 (192)
278 1xky_A Dihydrodipicolinate syn 40.3 1.8E+02 0.0061 28.4 10.9 95 246-351 40-138 (301)
279 2htm_A Thiazole biosynthesis p 40.2 1.3E+02 0.0045 29.3 9.5 83 252-349 146-229 (268)
280 1oy0_A Ketopantoate hydroxymet 40.2 2.7E+02 0.0094 27.1 12.1 32 386-418 189-220 (281)
281 3daq_A DHDPS, dihydrodipicolin 40.0 2.6E+02 0.0089 27.0 12.0 96 246-352 30-129 (292)
282 1wa3_A 2-keto-3-deoxy-6-phosph 40.0 1.4E+02 0.0048 26.7 9.5 123 192-348 75-201 (205)
283 3flu_A DHDPS, dihydrodipicolin 40.0 2.2E+02 0.0076 27.6 11.5 90 252-352 42-134 (297)
284 2ehh_A DHDPS, dihydrodipicolin 39.9 2.3E+02 0.0078 27.4 11.6 95 246-351 28-126 (294)
285 3b0p_A TRNA-dihydrouridine syn 39.8 95 0.0032 31.1 8.9 121 188-327 70-225 (350)
286 1rvk_A Isomerase/lactonizing e 39.8 65 0.0022 32.4 7.8 46 32-80 156-207 (382)
287 2o55_A Putative glycerophospho 39.7 27 0.00091 33.2 4.6 58 275-348 201-258 (258)
288 1q77_A Hypothetical protein AQ 39.7 27 0.00094 28.9 4.2 41 377-418 97-137 (138)
289 2v9d_A YAGE; dihydrodipicolini 39.5 1.6E+02 0.0056 29.3 10.6 95 246-351 59-157 (343)
290 2hmc_A AGR_L_411P, dihydrodipi 39.5 1.2E+02 0.0039 30.5 9.5 99 190-292 49-157 (344)
291 3tak_A DHDPS, dihydrodipicolin 39.4 2.2E+02 0.0074 27.5 11.3 90 252-352 36-128 (291)
292 3fg9_A Protein of universal st 39.4 38 0.0013 28.7 5.2 42 376-418 105-155 (156)
293 3inp_A D-ribulose-phosphate 3- 39.4 1E+02 0.0035 29.5 8.7 129 192-347 45-189 (246)
294 2r8w_A AGR_C_1641P; APC7498, d 39.4 1.7E+02 0.0058 29.0 10.7 95 246-351 62-160 (332)
295 2yxg_A DHDPS, dihydrodipicolin 39.3 1.9E+02 0.0065 27.9 10.8 95 246-351 28-126 (289)
296 1f6k_A N-acetylneuraminate lya 39.2 2.1E+02 0.007 27.7 11.1 97 245-352 30-131 (293)
297 3dlo_A Universal stress protei 39.0 61 0.0021 27.7 6.5 41 377-418 105-154 (155)
298 3cpr_A Dihydrodipicolinate syn 39.0 2E+02 0.0068 28.0 11.0 95 246-351 44-142 (304)
299 3khd_A Pyruvate kinase; malari 39.0 1.8E+02 0.0061 31.0 11.1 80 138-224 181-279 (520)
300 3qze_A DHDPS, dihydrodipicolin 39.0 2.1E+02 0.0071 28.1 11.2 90 252-352 58-150 (314)
301 2r14_A Morphinone reductase; H 38.9 2E+02 0.0068 29.1 11.3 122 184-327 155-328 (377)
302 3tml_A 2-dehydro-3-deoxyphosph 38.7 92 0.0031 30.7 8.3 111 197-331 44-175 (288)
303 3fs2_A 2-dehydro-3-deoxyphosph 38.7 2.1E+02 0.0071 28.3 10.9 109 199-331 70-193 (298)
304 2q02_A Putative cytoplasmic pr 38.7 2.3E+02 0.0079 25.9 12.6 41 190-230 21-67 (272)
305 1w3i_A EDA, 2-keto-3-deoxy glu 38.6 1.9E+02 0.0064 28.0 10.7 98 190-292 22-129 (293)
306 2r91_A 2-keto-3-deoxy-(6-phosp 38.4 1.8E+02 0.0061 28.1 10.5 94 194-292 25-128 (286)
307 3ayr_A Endoglucanase; TIM barr 38.4 67 0.0023 32.1 7.6 54 27-82 62-125 (376)
308 2nli_A Lactate oxidase; flavoe 38.4 95 0.0032 31.4 8.7 96 211-328 216-314 (368)
309 1xm3_A Thiazole biosynthesis p 38.3 2E+02 0.0068 27.4 10.7 57 284-352 176-232 (264)
310 3tbh_A O-acetyl serine sulfhyd 38.3 1.1E+02 0.0037 30.2 9.0 117 276-418 85-210 (334)
311 4dwd_A Mandelate racemase/muco 38.2 1E+02 0.0035 31.3 9.0 63 16-81 125-199 (393)
312 3eb2_A Putative dihydrodipicol 38.1 55 0.0019 32.1 6.7 97 192-292 29-136 (300)
313 1ve1_A O-acetylserine sulfhydr 38.1 2.8E+02 0.0094 26.6 12.5 115 277-418 76-199 (304)
314 3gg7_A Uncharacterized metallo 38.1 60 0.002 31.1 6.8 96 189-293 15-125 (254)
315 3ovp_A Ribulose-phosphate 3-ep 38.0 59 0.002 30.6 6.7 116 191-334 21-149 (228)
316 1zzm_A Putative deoxyribonucle 37.9 1.6E+02 0.0055 27.1 9.8 103 189-293 20-134 (259)
317 2rfg_A Dihydrodipicolinate syn 37.8 1.8E+02 0.006 28.3 10.3 95 246-351 28-126 (297)
318 1tkk_A Similar to chloromucona 37.8 66 0.0023 32.1 7.4 46 32-80 147-192 (366)
319 1nu5_A Chloromuconate cycloiso 37.6 55 0.0019 32.8 6.8 36 32-67 149-185 (370)
320 2yr1_A 3-dehydroquinate dehydr 37.5 2E+02 0.007 27.4 10.6 118 195-327 39-176 (257)
321 2dpr_A CON-T(K7GLA); conantoxi 37.4 25 0.00084 21.4 2.4 16 54-69 3-18 (26)
322 1h5y_A HISF; histidine biosynt 37.4 60 0.0021 29.8 6.6 80 195-289 161-251 (253)
323 2ftp_A Hydroxymethylglutaryl-C 37.3 2.9E+02 0.01 26.7 12.0 104 310-418 86-208 (302)
324 3bdk_A D-mannonate dehydratase 37.3 29 0.00099 35.6 4.6 85 188-292 31-123 (386)
325 1p0k_A Isopentenyl-diphosphate 37.2 97 0.0033 30.7 8.5 31 286-328 251-281 (349)
326 3na8_A Putative dihydrodipicol 37.1 1.9E+02 0.0064 28.5 10.5 90 252-352 59-151 (315)
327 3tva_A Xylose isomerase domain 37.1 1.2E+02 0.0041 28.4 8.8 38 195-232 28-69 (290)
328 3h8v_A Ubiquitin-like modifier 37.0 73 0.0025 31.3 7.3 67 216-292 91-168 (292)
329 3f2b_A DNA-directed DNA polyme 37.0 5.5E+02 0.019 29.7 16.8 127 189-320 133-350 (1041)
330 2nv1_A Pyridoxal biosynthesis 36.9 64 0.0022 31.5 7.0 36 312-347 223-258 (305)
331 3gg8_A Pyruvate kinase; malari 36.9 2.4E+02 0.0083 29.9 11.7 79 138-223 172-269 (511)
332 3q3v_A Phosphoglycerate kinase 36.8 3.1 0.00011 43.1 -2.8 121 1-141 24-149 (403)
333 2qr6_A IMP dehydrogenase/GMP r 36.4 68 0.0023 32.5 7.3 73 191-266 223-314 (393)
334 2gm3_A Unknown protein; AT3G01 36.4 49 0.0017 28.6 5.5 41 377-418 112-161 (175)
335 3si9_A DHDPS, dihydrodipicolin 36.4 2.1E+02 0.0073 28.1 10.8 144 252-418 57-208 (315)
336 3a5f_A Dihydrodipicolinate syn 36.3 62 0.0021 31.5 6.7 98 190-291 24-132 (291)
337 3kru_A NADH:flavin oxidoreduct 36.2 1.7E+02 0.0059 29.2 10.1 130 184-327 132-307 (343)
338 2oz8_A MLL7089 protein; struct 36.2 55 0.0019 33.2 6.5 62 16-80 132-197 (389)
339 3loq_A Universal stress protei 36.1 1.2E+02 0.004 28.6 8.6 34 384-418 118-160 (294)
340 1tzz_A Hypothetical protein L1 36.1 67 0.0023 32.5 7.2 45 33-80 173-217 (392)
341 2v5j_A 2,4-dihydroxyhept-2-ENE 36.1 1.3E+02 0.0046 29.2 9.1 88 219-328 30-119 (287)
342 2vc6_A MOSA, dihydrodipicolina 36.0 1.8E+02 0.006 28.2 10.0 95 246-351 28-126 (292)
343 1php_A 3-phosphoglycerate kina 35.9 2.1 7.3E-05 44.2 -4.1 121 1-141 20-145 (394)
344 2ojp_A DHDPS, dihydrodipicolin 35.7 1.5E+02 0.0051 28.7 9.4 95 246-351 29-127 (292)
345 3gr7_A NADPH dehydrogenase; fl 35.5 2.2E+02 0.0075 28.3 10.8 129 184-327 133-307 (340)
346 1gox_A (S)-2-hydroxy-acid oxid 35.4 1.7E+02 0.006 29.3 10.2 60 273-332 88-161 (370)
347 1h1n_A Endo type cellulase ENG 35.4 48 0.0017 32.0 5.8 53 29-83 33-95 (305)
348 1jmv_A USPA, universal stress 35.4 64 0.0022 26.6 5.9 41 377-418 90-136 (141)
349 3sgz_A Hydroxyacid oxidase 2; 35.2 1E+02 0.0034 31.2 8.2 31 286-328 272-302 (352)
350 1y8q_A Ubiquitin-like 1 activa 34.8 1E+02 0.0035 30.7 8.2 66 215-292 91-156 (346)
351 3r2g_A Inosine 5'-monophosphat 34.8 33 0.0011 34.9 4.6 46 21-66 93-138 (361)
352 3hqn_D Pyruvate kinase, PK; TI 34.8 3.2E+02 0.011 28.9 12.2 150 117-284 140-356 (499)
353 1xwy_A DNAse TATD, deoxyribonu 34.8 1.9E+02 0.0066 26.6 9.8 101 189-293 20-132 (264)
354 1yad_A Regulatory protein TENI 34.7 89 0.003 28.6 7.3 50 15-65 15-67 (221)
355 1o4u_A Type II quinolic acid p 34.7 28 0.00096 34.3 3.9 65 189-259 202-269 (285)
356 1j6o_A TATD-related deoxyribon 34.5 1.5E+02 0.0052 27.7 9.1 102 188-293 27-140 (268)
357 3dwg_A Cysteine synthase B; su 34.5 1.8E+02 0.006 28.5 9.8 41 377-418 56-102 (325)
358 2qdd_A Mandelate racemase/muco 34.3 68 0.0023 32.2 6.9 49 16-66 134-186 (378)
359 1jw9_B Molybdopterin biosynthe 34.3 80 0.0027 29.8 7.0 66 216-292 87-152 (249)
360 3l12_A Putative glycerophospho 34.2 1.5E+02 0.005 28.9 9.1 51 275-345 257-307 (313)
361 1o5k_A DHDPS, dihydrodipicolin 34.2 1.9E+02 0.0067 28.1 10.0 95 246-351 40-138 (306)
362 2y1h_A Putative deoxyribonucle 34.1 68 0.0023 30.1 6.5 105 188-293 20-146 (272)
363 1tdj_A Biosynthetic threonine 34.0 4.5E+02 0.015 27.8 13.7 148 230-418 46-212 (514)
364 4aec_A Cysteine synthase, mito 33.9 1.4E+02 0.0046 31.0 9.1 120 276-418 188-313 (430)
365 1j0a_A 1-aminocyclopropane-1-c 33.8 1.2E+02 0.004 29.7 8.4 124 276-418 85-214 (325)
366 1viz_A PCRB protein homolog; s 33.6 51 0.0017 31.5 5.4 56 18-77 9-67 (240)
367 3l21_A DHDPS, dihydrodipicolin 33.6 1.8E+02 0.0062 28.4 9.7 89 252-351 50-141 (304)
368 3dz1_A Dihydrodipicolinate syn 33.5 2.4E+02 0.008 27.6 10.5 87 252-351 43-132 (313)
369 1z7w_A Cysteine synthase; tran 33.4 1.9E+02 0.0064 28.1 9.8 119 277-418 81-205 (322)
370 1z41_A YQJM, probable NADH-dep 33.4 2.7E+02 0.0091 27.4 11.0 127 185-327 134-307 (338)
371 1xi3_A Thiamine phosphate pyro 33.4 1.3E+02 0.0046 26.8 8.2 47 30-78 29-75 (215)
372 2yci_X 5-methyltetrahydrofolat 33.3 60 0.0021 31.5 6.0 51 31-83 38-88 (271)
373 1p5j_A L-serine dehydratase; l 32.9 2.9E+02 0.0098 27.6 11.3 114 277-418 107-229 (372)
374 1jbq_A B, cystathionine beta-s 32.9 1.3E+02 0.0043 31.3 8.7 122 277-418 175-302 (435)
375 2cks_A Endoglucanase E-5; carb 32.4 70 0.0024 30.8 6.4 53 28-82 43-102 (306)
376 3b4u_A Dihydrodipicolinate syn 32.2 1.9E+02 0.0065 28.0 9.5 94 246-350 31-129 (294)
377 1o60_A 2-dehydro-3-deoxyphosph 32.2 2.1E+02 0.0072 28.0 9.8 98 215-336 77-175 (292)
378 3ngj_A Deoxyribose-phosphate a 32.2 3.4E+02 0.011 25.8 11.2 119 286-418 76-206 (239)
379 1tv5_A Dhodehase, dihydroorota 32.2 1.2E+02 0.0043 31.5 8.5 87 229-327 296-402 (443)
380 2pqm_A Cysteine synthase; OASS 32.0 1.4E+02 0.0048 29.5 8.7 116 277-418 92-216 (343)
381 4dbe_A Orotidine 5'-phosphate 32.0 88 0.003 29.3 6.7 82 195-282 129-211 (222)
382 1zud_1 Adenylyltransferase THI 31.9 1.1E+02 0.0036 29.0 7.5 66 216-292 84-149 (251)
383 2gn0_A Threonine dehydratase c 31.8 3.8E+02 0.013 26.3 12.5 116 276-418 101-221 (342)
384 3mt0_A Uncharacterized protein 31.8 2.9E+02 0.01 25.7 10.7 41 377-418 77-126 (290)
385 2nli_A Lactate oxidase; flavoe 31.7 81 0.0028 31.9 6.9 61 191-259 241-314 (368)
386 3idf_A USP-like protein; unive 31.4 42 0.0015 27.6 4.0 39 377-418 91-137 (138)
387 3knb_A Titin; IG-like, titin, 31.4 1.1E+02 0.0039 23.8 6.5 71 94-164 13-85 (100)
388 1yx1_A Hypothetical protein PA 31.3 87 0.003 29.1 6.7 36 192-229 28-66 (264)
389 2nzl_A Hydroxyacid oxidase 1; 31.2 71 0.0024 32.7 6.4 95 212-328 240-337 (392)
390 3ldv_A Orotidine 5'-phosphate 31.2 42 0.0014 32.5 4.4 76 195-278 169-254 (255)
391 3nco_A Endoglucanase fncel5A; 31.2 90 0.0031 30.2 7.0 52 29-82 43-104 (320)
392 3sjn_A Mandelate racemase/muco 30.9 86 0.0029 31.6 6.9 49 30-81 151-201 (374)
393 1zcc_A Glycerophosphodiester p 30.9 1E+02 0.0035 28.9 7.1 54 273-346 180-235 (248)
394 3sr7_A Isopentenyl-diphosphate 30.4 1.3E+02 0.0044 30.5 8.1 90 214-327 196-307 (365)
395 2aam_A Hypothetical protein TM 30.2 1.3E+02 0.0043 29.8 7.9 90 195-291 129-245 (309)
396 3a24_A Alpha-galactosidase; gl 30.2 2.2E+02 0.0074 31.2 10.3 104 170-291 297-423 (641)
397 2qkf_A 3-deoxy-D-manno-octulos 30.0 2.9E+02 0.0099 26.7 10.3 106 216-345 75-186 (280)
398 4h27_A L-serine dehydratase/L- 29.8 2.3E+02 0.0079 28.2 9.9 114 277-418 107-229 (364)
399 3kts_A Glycerol uptake operon 29.8 1.1E+02 0.0037 28.3 6.8 127 188-350 17-149 (192)
400 1qpg_A PGK, 3-phosphoglycerate 29.7 4.1 0.00014 42.3 -3.2 122 1-141 22-162 (415)
401 3dzv_A 4-methyl-5-(beta-hydrox 29.6 70 0.0024 31.1 5.8 82 196-291 12-93 (273)
402 1tt5_A APPBP1, amyloid protein 29.5 72 0.0024 34.1 6.3 67 216-292 88-155 (531)
403 1y7l_A O-acetylserine sulfhydr 29.4 2.7E+02 0.0092 26.8 10.2 117 277-418 76-202 (316)
404 1aj0_A DHPS, dihydropteroate s 29.4 2.4E+02 0.0082 27.4 9.6 92 311-418 42-139 (282)
405 2e28_A Pyruvate kinase, PK; al 29.4 5.6E+02 0.019 27.6 14.8 133 139-284 139-338 (587)
406 3m9b_A Proteasome-associated A 29.3 1.7E+02 0.006 28.1 8.3 27 80-106 117-143 (251)
407 3p6l_A Sugar phosphate isomera 29.2 2.3E+02 0.008 25.9 9.3 44 189-232 23-81 (262)
408 1p0k_A Isopentenyl-diphosphate 29.1 84 0.0029 31.2 6.4 69 190-262 192-284 (349)
409 3qvq_A Phosphodiesterase OLEI0 29.0 78 0.0027 29.8 5.9 102 203-344 145-248 (252)
410 1ece_A Endocellulase E1; glyco 29.0 57 0.002 32.0 5.2 52 30-83 47-118 (358)
411 1ypf_A GMP reductase; GUAC, pu 28.9 47 0.0016 33.0 4.5 47 20-66 98-146 (336)
412 3aof_A Endoglucanase; glycosyl 28.8 85 0.0029 30.1 6.3 52 29-82 35-96 (317)
413 3h5d_A DHDPS, dihydrodipicolin 28.8 2.2E+02 0.0074 27.9 9.3 92 246-351 35-134 (311)
414 2egu_A Cysteine synthase; O-ac 28.8 2.1E+02 0.007 27.6 9.1 118 277-418 79-202 (308)
415 1ofd_A Ferredoxin-dependent gl 28.7 3.3E+02 0.011 32.9 12.1 116 197-327 993-1128(1520)
416 2v03_A Cysteine synthase B; py 28.6 2E+02 0.0069 27.7 9.0 115 277-418 75-198 (303)
417 3tfx_A Orotidine 5'-phosphate 28.6 83 0.0028 30.4 6.0 74 195-276 151-234 (259)
418 2og9_A Mandelate racemase/muco 28.4 92 0.0031 31.5 6.7 62 16-80 148-214 (393)
419 2jep_A Xyloglucanase; family 5 28.3 1.1E+02 0.0038 30.5 7.2 54 28-83 70-133 (395)
420 1gox_A (S)-2-hydroxy-acid oxid 28.3 77 0.0027 32.0 6.1 63 191-259 237-310 (370)
421 1to3_A Putative aldolase YIHT; 28.3 4.2E+02 0.014 25.8 12.2 145 194-352 114-291 (304)
422 3sgz_A Hydroxyacid oxidase 2; 28.2 1.1E+02 0.0036 31.0 7.0 95 191-288 229-337 (352)
423 4h3d_A 3-dehydroquinate dehydr 28.1 3.9E+02 0.013 25.3 11.5 136 176-326 20-175 (258)
424 3tj4_A Mandelate racemase; eno 28.1 2.6E+02 0.0089 27.9 10.0 61 17-80 138-204 (372)
425 3stp_A Galactonate dehydratase 28.1 96 0.0033 31.8 6.8 56 229-292 281-338 (412)
426 1vc4_A Indole-3-glycerol phosp 28.0 2.7E+02 0.0093 26.3 9.6 107 189-327 66-181 (254)
427 1ceo_A Cellulase CELC; glycosy 28.0 78 0.0027 30.8 5.9 52 28-81 29-90 (343)
428 1ivn_A Thioesterase I; hydrola 27.9 93 0.0032 27.0 5.9 53 241-293 50-106 (190)
429 2whl_A Beta-mannanase, baman5; 27.9 63 0.0021 30.9 5.1 52 29-82 33-86 (294)
430 4dpp_A DHDPS 2, dihydrodipicol 27.9 1.4E+02 0.0048 30.3 7.8 96 191-292 83-189 (360)
431 3cny_A Inositol catabolism pro 27.8 1.2E+02 0.004 28.5 7.0 40 190-231 33-72 (301)
432 1o66_A 3-methyl-2-oxobutanoate 27.8 1.4E+02 0.0047 29.2 7.4 33 385-418 170-202 (275)
433 1v8a_A Hydroxyethylthiazole ki 27.7 68 0.0023 30.8 5.2 45 242-291 47-91 (265)
434 1m3u_A 3-methyl-2-oxobutanoate 27.7 4.2E+02 0.014 25.5 11.8 130 184-327 21-181 (264)
435 3ve9_A Orotidine-5'-phosphate 27.6 53 0.0018 30.8 4.3 84 190-280 117-202 (215)
436 3cwc_A Putative glycerate kina 27.6 86 0.0029 32.2 6.2 59 230-291 266-324 (383)
437 3pr9_A FKBP-type peptidyl-prol 27.5 1.6E+02 0.0055 26.0 7.4 59 96-158 62-127 (157)
438 1v71_A Serine racemase, hypoth 27.4 3.7E+02 0.013 25.9 10.8 114 276-418 87-207 (323)
439 1ve5_A Threonine deaminase; ri 27.2 3.2E+02 0.011 26.1 10.3 115 277-418 79-202 (311)
440 3l6b_A Serine racemase; pyrido 27.2 1.2E+02 0.0042 30.0 7.3 102 299-422 1-108 (346)
441 1tx2_A DHPS, dihydropteroate s 26.8 2.1E+02 0.0071 28.1 8.7 69 15-85 38-127 (297)
442 3hp4_A GDSL-esterase; psychrot 26.7 56 0.0019 28.1 4.2 54 240-293 53-110 (185)
443 2qul_A D-tagatose 3-epimerase; 26.7 1.4E+02 0.0049 27.7 7.4 44 189-232 18-65 (290)
444 1gvf_A Tagatose-bisphosphate a 26.6 1.4E+02 0.0046 29.4 7.2 43 29-71 86-128 (286)
445 3fij_A LIN1909 protein; 11172J 26.5 1.4E+02 0.0047 28.2 7.2 46 245-290 55-112 (254)
446 1k77_A EC1530, hypothetical pr 26.4 2.6E+02 0.009 25.3 9.1 33 195-228 22-54 (260)
447 7a3h_A Endoglucanase; hydrolas 26.3 75 0.0026 30.7 5.3 54 27-82 43-102 (303)
448 1ep3_A Dihydroorotate dehydrog 26.2 1.4E+02 0.0048 28.6 7.3 86 195-288 183-297 (311)
449 1x1o_A Nicotinate-nucleotide p 26.2 75 0.0026 31.2 5.3 64 189-259 205-269 (286)
450 3tr9_A Dihydropteroate synthas 26.1 3.9E+02 0.013 26.4 10.6 138 310-488 52-198 (314)
451 3no3_A Glycerophosphodiester p 26.1 3.4E+02 0.011 25.1 9.8 51 275-345 185-235 (238)
452 2z6i_A Trans-2-enoyl-ACP reduc 26.1 4.6E+02 0.016 25.5 12.7 110 189-328 25-138 (332)
453 1v6s_A Phosphoglycerate kinase 26.1 6.7 0.00023 40.4 -2.4 119 1-141 18-142 (390)
454 3ndo_A Deoxyribose-phosphate a 26.1 3E+02 0.01 26.0 9.4 124 285-418 60-196 (231)
455 2d73_A Alpha-glucosidase SUSB; 26.0 2.5E+02 0.0087 31.2 9.9 102 186-291 370-506 (738)
456 3fkr_A L-2-keto-3-deoxyarabona 26.0 4.6E+02 0.016 25.4 11.2 89 252-352 43-138 (309)
457 3iwp_A Copper homeostasis prot 25.9 4.7E+02 0.016 25.5 12.6 134 189-354 48-210 (287)
458 3o63_A Probable thiamine-phosp 25.6 1.6E+02 0.0055 27.9 7.4 44 30-73 46-98 (243)
459 1oy0_A Ketopantoate hydroxymet 25.4 4.8E+02 0.016 25.4 11.0 131 183-327 37-199 (281)
460 3olq_A Universal stress protei 25.2 1.9E+02 0.0065 27.3 8.1 41 377-418 99-148 (319)
461 2osx_A Endoglycoceramidase II; 25.2 91 0.0031 32.3 6.1 53 27-81 65-126 (481)
462 1m3u_A 3-methyl-2-oxobutanoate 25.2 4.7E+02 0.016 25.2 14.8 147 252-418 38-202 (264)
463 3nl6_A Thiamine biosynthetic b 25.1 1.1E+02 0.0037 32.8 6.6 44 30-73 28-71 (540)
464 2g0w_A LMO2234 protein; putati 25.0 2.7E+02 0.0091 26.2 9.1 132 188-351 36-175 (296)
465 1thf_D HISF protein; thermophI 24.9 1.4E+02 0.0047 27.7 6.8 84 195-290 158-249 (253)
466 1vhn_A Putative flavin oxidore 24.8 80 0.0028 31.0 5.3 113 195-327 78-213 (318)
467 3r12_A Deoxyribose-phosphate a 24.8 3.4E+02 0.011 26.2 9.5 119 286-418 92-222 (260)
468 2nzl_A Hydroxyacid oxidase 1; 24.8 1.2E+02 0.0041 30.9 6.8 63 190-260 263-338 (392)
469 1sfl_A 3-dehydroquinate dehydr 24.8 1.5E+02 0.0053 27.8 7.1 86 14-107 123-215 (238)
470 2qgq_A Protein TM_1862; alpha- 24.7 69 0.0024 31.1 4.8 34 21-54 92-127 (304)
471 3ih1_A Methylisocitrate lyase; 24.7 1.6E+02 0.0056 29.0 7.5 79 227-326 157-242 (305)
472 1o94_A Tmadh, trimethylamine d 24.7 2.5E+02 0.0085 30.8 9.8 132 184-327 138-321 (729)
473 2yr1_A 3-dehydroquinate dehydr 24.6 1.7E+02 0.006 27.9 7.5 65 14-78 137-208 (257)
474 3if2_A Aminotransferase; YP_26 24.6 1.2E+02 0.0042 30.2 6.8 41 28-69 378-439 (444)
475 3pzt_A Endoglucanase; alpha/be 24.6 92 0.0031 30.6 5.7 54 27-82 68-127 (327)
476 2q3b_A Cysteine synthase A; py 24.5 3.7E+02 0.013 25.8 10.1 116 277-418 81-205 (313)
477 3hgj_A Chromate reductase; TIM 24.5 1E+02 0.0034 30.8 6.0 72 186-263 237-323 (349)
478 3ddy_A Lumazine protein, LUMP; 24.5 1.5E+02 0.0052 27.2 6.7 54 118-176 23-84 (186)
479 3n9k_A Glucan 1,3-beta-glucosi 24.5 69 0.0024 32.8 4.9 51 29-81 75-134 (399)
480 3toy_A Mandelate racemase/muco 24.3 2.8E+02 0.0096 27.8 9.5 61 15-80 155-220 (383)
481 3g0t_A Putative aminotransfera 24.3 97 0.0033 30.7 5.9 42 28-69 382-436 (437)
482 1ix5_A FKBP; ppiase, isomerase 24.2 87 0.003 27.4 4.9 58 97-158 64-128 (151)
483 2pp0_A L-talarate/galactarate 24.1 1.2E+02 0.0043 30.6 6.7 62 16-80 161-227 (398)
484 2rdx_A Mandelate racemase/muco 24.0 1.1E+02 0.0037 30.7 6.2 59 16-80 134-196 (379)
485 3q94_A Fructose-bisphosphate a 24.0 1.4E+02 0.0049 29.2 6.9 44 28-71 91-134 (288)
486 1geq_A Tryptophan synthase alp 24.0 4.2E+02 0.014 24.2 11.7 99 229-349 80-189 (248)
487 1g01_A Endoglucanase; alpha/be 24.0 84 0.0029 31.2 5.3 53 28-82 54-112 (364)
488 3ab8_A Putative uncharacterize 23.8 3.1E+02 0.01 25.1 9.0 31 387-418 107-147 (268)
489 1h4p_A Glucan 1,3-beta-glucosi 23.7 96 0.0033 31.6 5.8 52 29-82 75-136 (408)
490 2kct_A Cytochrome C-type bioge 23.7 3E+02 0.01 22.4 7.8 57 81-138 7-65 (94)
491 2pz0_A Glycerophosphoryl diest 23.6 1.5E+02 0.0052 27.7 6.9 49 275-343 200-248 (252)
492 2bdq_A Copper homeostasis prot 23.6 4.7E+02 0.016 24.6 11.3 115 282-418 50-184 (224)
493 3s1x_A Probable transaldolase; 23.5 50 0.0017 31.3 3.3 59 196-260 120-190 (223)
494 3eul_A Possible nitrate/nitrit 23.5 2.7E+02 0.0094 22.6 7.9 62 381-454 53-119 (152)
495 1v5x_A PRA isomerase, phosphor 23.5 83 0.0028 29.1 4.8 70 189-261 10-84 (203)
496 3qfe_A Putative dihydrodipicol 23.3 5.2E+02 0.018 25.2 11.0 90 252-352 46-140 (318)
497 2isw_A Putative fructose-1,6-b 23.3 1.5E+02 0.0051 29.7 6.8 44 28-71 86-129 (323)
498 2v03_A Cysteine synthase B; py 23.3 2.5E+02 0.0086 27.0 8.6 22 470-493 154-175 (303)
499 3fst_A 5,10-methylenetetrahydr 23.1 74 0.0025 31.5 4.6 58 187-245 163-223 (304)
500 3mil_A Isoamyl acetate-hydroly 23.1 96 0.0033 27.7 5.2 55 239-293 57-120 (240)
No 1
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.6e-138 Score=1113.45 Aligned_cols=480 Identities=48% Similarity=0.768 Sum_probs=450.0
Q ss_pred CCCCcccccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHH-HcCCeeEEEEecCCC
Q 010627 5 CGVSTAIEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMV-NTGILCAVMLDTKGP 83 (505)
Q Consensus 5 ~~~~~~~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~-~~~~~v~i~~Dl~Gp 83 (505)
|++..+-.+.|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++ ++++|++||+|||||
T Consensus 34 ~~~~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GP 113 (526)
T 4drs_A 34 SPLADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDTKGP 113 (526)
T ss_dssp --------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEEEEECCCS
T ss_pred cccccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEECCCC
Confidence 4445555678999999999999999999999999999999999999999999999999999987 689999999999999
Q ss_pred eeEEeecCCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEee
Q 010627 84 EIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCEN 163 (505)
Q Consensus 84 kiR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~ 163 (505)
|||||.++++++++|++||.|+|+++....|+.+.++++|+++++++++||.||+|||+|.|+|++ ++++.+.|+|++
T Consensus 114 kIR~g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~--v~~~~i~~~V~~ 191 (526)
T 4drs_A 114 EIRTGMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLE--IGDDFIVCKVLN 191 (526)
T ss_dssp CCBBCCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEE--ECSSEEEEECCS
T ss_pred eeEEEecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEE--EeCCeEEEEecc
Confidence 999999998778999999999999987778999999999999999999999999999999999995 588999999999
Q ss_pred CceecCCCCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCC-------CceEEEEe
Q 010627 164 SAMLGERKNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAK-------NILLMSKV 236 (505)
Q Consensus 164 gG~l~s~Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~-------~~~IiakI 236 (505)
||.|+++||||+|+..+++|.||+||.+|+.+||+++|+|||++|||++++||.++|++|.+.+. +++|||||
T Consensus 192 gG~L~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKI 271 (526)
T 4drs_A 192 SVTIGERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKI 271 (526)
T ss_dssp CCEECSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEE
T ss_pred CccccccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeeh
Confidence 99999999999999999999999999998338999999999999999999999999999988763 68999999
Q ss_pred cCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHH
Q 010627 237 ENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 316 (505)
Q Consensus 237 Et~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~na 316 (505)
|+++|++|+|||++++|||||||||||+|+|+|+||.+||+|+++|+++|||||+||||||||++||+|||||++|||||
T Consensus 272 E~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnA 351 (526)
T 4drs_A 272 ENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANA 351 (526)
T ss_dssp CSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHH
T ss_pred hccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEE
Q 010627 317 VLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVL 396 (505)
Q Consensus 317 v~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~ 396 (505)
|+||+||+|||+|||.|+||+|+|++|++||+++|+.++|+..|..+....+.+.+..+++|.+|+++|.+++|++||+|
T Consensus 352 V~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~ 431 (526)
T 4drs_A 352 VLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITI 431 (526)
T ss_dssp HHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999999999999999999999999999999999999998888777666666778899999999999999999999999
Q ss_pred cCCchHHHHHHhhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHH
Q 010627 397 TRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGK 476 (505)
Q Consensus 397 T~sG~ta~~ls~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~ 476 (505)
|.||+||+++|||||.|||||+ | ++++++|||+|+|||+|++++. ..+.+++++.|+++++
T Consensus 432 T~sG~tA~~iSr~RP~~pI~a~-------T------~~~~~~r~l~L~wGV~p~~~~~------~~~~d~~i~~a~~~~~ 492 (526)
T 4drs_A 432 TETGNTARLISKYRPSQTIIAC-------T------AKPEVARGLKIARGVKTYVLNS------IHHSEVVISNALALAK 492 (526)
T ss_dssp CSSSHHHHHHHHTCCSSEEEEE-------E------SCHHHHHHGGGSTTEEEEECSC------CCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHhhCCCCCEEEE-------C------CCHHHHHhhhccCCeEEEEeCC------CCCHHHHHHHHHHHHH
Confidence 9999999999999999999999 8 9999999999999999999976 6788999999999999
Q ss_pred HcCCCCCCCEEEEEeec-----CCCceEEEEEcC
Q 010627 477 KKGLCKKGDSVVALHRV-----GTASVIKILNVK 505 (505)
Q Consensus 477 ~~g~~~~GD~VVvv~g~-----g~tn~ikI~~v~ 505 (505)
++|++++||.||+++|+ |+||+|||++||
T Consensus 493 ~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 493 EESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp HTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred HCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence 99999999999999997 899999999997
No 2
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=8.8e-138 Score=1108.33 Aligned_cols=486 Identities=48% Similarity=0.764 Sum_probs=461.7
Q ss_pred CCCCCcc--cccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHH------cCCeeE
Q 010627 4 NCGVSTA--IEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVN------TGILCA 75 (505)
Q Consensus 4 ~~~~~~~--~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~------~~~~v~ 75 (505)
.|.++.. ...+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|+++++ +++|++
T Consensus 49 ~~~l~~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~~~va 128 (550)
T 3gr4_A 49 MCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVA 128 (550)
T ss_dssp HHTCCTTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCE
T ss_pred hhccCCCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccCceEE
Confidence 4666654 34679999999999999999999999999999999999999999999999999999998 899999
Q ss_pred EEEecCCCeeEEeecCCC--CcEEecCCCEEEEEecC--CCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEe
Q 010627 76 VMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTDY--TIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECN 151 (505)
Q Consensus 76 i~~Dl~GpkiR~g~~~~~--~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~ 151 (505)
||+||||||||||.++++ .+++|++||.|+|+++. ...|+.+.|++||++|+++|++||+||+|||+|.|+|++
T Consensus 129 IllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~-- 206 (550)
T 3gr4_A 129 VALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQ-- 206 (550)
T ss_dssp EEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEE--
T ss_pred EEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEE--
Confidence 999999999999999753 46999999999999874 357889999999999999999999999999999999995
Q ss_pred eeCCeEEEEEeeCceecCCCCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCce
Q 010627 152 VKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNIL 231 (505)
Q Consensus 152 ~~~~~i~~~v~~gG~l~s~Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~ 231 (505)
++++.+.|+|++||.|+++||||+||..+++|.||+||++|| +|++++|+|||++|||++++|+++++++|.+.|.++.
T Consensus 207 v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl-~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~ 285 (550)
T 3gr4_A 207 KGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIK 285 (550)
T ss_dssp ECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSE
T ss_pred EeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHH-HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCce
Confidence 588999999999999999999999999999999999999999 9999999999999999999999999999999998999
Q ss_pred EEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHH
Q 010627 232 LMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEAT 311 (505)
Q Consensus 232 IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~ 311 (505)
||||||+++||+|+|||++++|||||||||||+|+|.+++|.+||+|+.+|+++|||||+||||||||++||+|||||++
T Consensus 286 IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvs 365 (550)
T 3gr4_A 286 IISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGS 365 (550)
T ss_dssp EEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCc
Q 010627 312 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARAT 391 (505)
Q Consensus 312 Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~ 391 (505)
||||||+||+||+|||+|||.|+||+|+|++|++||+++|+.++|...|.++....+.+.+..+++|.+|+++|.+++|+
T Consensus 366 DVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~ 445 (550)
T 3gr4_A 366 DVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSG 445 (550)
T ss_dssp HHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999998888887665444455678899999999999999999
Q ss_pred EEEEEcCCchHHHHHHhhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHH
Q 010627 392 LILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFA 471 (505)
Q Consensus 392 ~Ivv~T~sG~ta~~ls~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a 471 (505)
+||+||.||+||+++|||||+|||||+ | ++++++|||+|+|||+|++++....+.|.++.+++++.|
T Consensus 446 aIv~~T~SG~TA~~iSr~RP~~PIia~-------T------~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a 512 (550)
T 3gr4_A 446 AIIVLTKSGRSAHQVARYRPRAPIIAV-------T------RNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFA 512 (550)
T ss_dssp CEEEECSSSHHHHHHHTTCCSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHhhCCCCCEEEE-------c------CCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHH
Confidence 999999999999999999999999999 8 999999999999999999998766667888999999999
Q ss_pred HHHHHHcCCCCCCCEEEEEeec----CCCceEEEEEcC
Q 010627 472 IELGKKKGLCKKGDSVVALHRV----GTASVIKILNVK 505 (505)
Q Consensus 472 l~~~~~~g~~~~GD~VVvv~g~----g~tn~ikI~~v~ 505 (505)
++++++.|++++||.||+++|+ |+||+|||+.|+
T Consensus 513 ~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 513 MNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp HHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred HHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 9999999999999999999998 899999999885
No 3
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.2e-138 Score=1102.87 Aligned_cols=472 Identities=50% Similarity=0.818 Sum_probs=440.1
Q ss_pred ccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHH-HcCCeeEEEEecCCCeeEEeec
Q 010627 12 EKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMV-NTGILCAVMLDTKGPEIRTGFL 90 (505)
Q Consensus 12 ~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~-~~~~~v~i~~Dl~GpkiR~g~~ 90 (505)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++++|++||+||||||||+|.+
T Consensus 43 ~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~~~vaIllDl~GPkIR~G~~ 122 (520)
T 3khd_A 43 LRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLGMLLDTKGPEIRTGFL 122 (520)
T ss_dssp GGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCEEEEECCCCCEEBCEE
T ss_pred ccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCeEEeecc
Confidence 467999999999999999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceecCC
Q 010627 91 KDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGER 170 (505)
Q Consensus 91 ~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~ 170 (505)
++++ ++|++||.|+|++++...|+.+.|++||++|+++|++||.||+|||+|.|+|++ ++++.+.|+|++||.|+++
T Consensus 123 ~~~~-~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~--~~~~~v~~~V~~gG~L~~~ 199 (520)
T 3khd_A 123 KNKE-VHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLE--THEDHVITEVLNSAVIGER 199 (520)
T ss_dssp C------------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEE--ECSSCEEEEECC-CCCCSS
T ss_pred CCCC-eEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEE--EECCEEEEEEEeCeEEeCC
Confidence 8754 599999999999986678899999999999999999999999999999999995 5889999999999999999
Q ss_pred CCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh
Q 010627 171 KNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA 250 (505)
Q Consensus 171 Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~ 250 (505)
||||+||..+++|.||+||++||.+|++++|+|||++|||++++||.++|++|.+.|.++.||||||+++||+|+|||++
T Consensus 200 KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~ 279 (520)
T 3khd_A 200 KNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILA 279 (520)
T ss_dssp CEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHH
T ss_pred ceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHH
Confidence 99999999999999999999999789999999999999999999999999999999989999999999999999999999
Q ss_pred cCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccC
Q 010627 251 NSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGET 330 (505)
Q Consensus 251 ~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Et 330 (505)
++|||||||||||+|+|.+++|.+||+|+.+|+++|||||+||||||||++||+|||||++||||||+||+||+|||+||
T Consensus 280 ~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgET 359 (520)
T 3khd_A 280 ESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGET 359 (520)
T ss_dssp HSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHH
T ss_pred hCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhC
Q 010627 331 AAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYR 410 (505)
Q Consensus 331 a~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~R 410 (505)
|.|+||+|+|++|++||+++|+.++|...|.......+.+.+..+++|.+|+++|.+++|++||+||.||+||+++||||
T Consensus 360 A~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~R 439 (520)
T 3khd_A 360 AGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYK 439 (520)
T ss_dssp HSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTC
T ss_pred cCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcC
Confidence 99999999999999999999999888877766544444456788999999999999999999999999999999999999
Q ss_pred CCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEE
Q 010627 411 PGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSVVAL 490 (505)
Q Consensus 411 P~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvv 490 (505)
|.|||||+ | ++++++|||+|+|||+|++++. ..+.+++++.|++++++.|++++||.||++
T Consensus 440 P~~PIia~-------T------~~~~~~r~l~L~~GV~p~~~~~------~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~ 500 (520)
T 3khd_A 440 PSCTILAL-------S------ASDSTVKCLNVHRGVTCIKVGS------FQGTDIVIRNAIEIAKQRNMAKVGDSVIAI 500 (520)
T ss_dssp CSSEEEEE-------E------SCHHHHHHGGGSTTEEEEECCS------CCCHHHHHHHHHHHHHHTTSSCTTCEEEEE
T ss_pred CCCCEEEE-------c------CCHHHHHHHhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEE
Confidence 99999999 8 9999999999999999999876 567899999999999999999999999999
Q ss_pred eec-----CCCceEEEEEcC
Q 010627 491 HRV-----GTASVIKILNVK 505 (505)
Q Consensus 491 ~g~-----g~tn~ikI~~v~ 505 (505)
+|+ |+||++||+.|+
T Consensus 501 ~G~~~g~~G~TN~lrv~~v~ 520 (520)
T 3khd_A 501 HGIKEEVSGGTNLMKVVQIE 520 (520)
T ss_dssp EC-CCSSTTCEEEEEEEECC
T ss_pred eCccCCCCCCCeEEEEEEeC
Confidence 997 799999999873
No 4
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=2.8e-137 Score=1096.59 Aligned_cols=477 Identities=43% Similarity=0.737 Sum_probs=449.7
Q ss_pred cccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEecCCCeeEEeec
Q 010627 11 IEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFL 90 (505)
Q Consensus 11 ~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~g~~ 90 (505)
...+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++++|++||+||||||||||.+
T Consensus 16 ~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~ 95 (499)
T 3hqn_D 16 VANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQF 95 (499)
T ss_dssp CCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCCB
T ss_pred cccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEEEEEeCCCCEEeeecc
Confidence 44679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEecC--CCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeee-CCeEEEEEeeCcee
Q 010627 91 KDGKPIQLKQGQEITISTDY--TIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVK-AGLVKCRCENSAML 167 (505)
Q Consensus 91 ~~~~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~-~~~i~~~v~~gG~l 167 (505)
++++++ |++||.|+|+++. ...|+.+.+++||++|+++|++||.||+|||+|.|+|+++ + ++.+.|+|++||.|
T Consensus 96 ~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~--~~~~~i~~~v~~gG~L 172 (499)
T 3hqn_D 96 VGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSH--EDEQTLECTVTNSHTI 172 (499)
T ss_dssp GGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEE--EETTEEEEEECSCEEE
T ss_pred CCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEE--cCCCeEEEEEEeCcEe
Confidence 876568 9999999999873 4678999999999999999999999999999999999965 4 66899999999999
Q ss_pred cCCCCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHH
Q 010627 168 GERKNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDD 247 (505)
Q Consensus 168 ~s~Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nlde 247 (505)
+++||||+||..+++|.||+||++|| +|++++|+|||++|||++++|+.+++++|.+.|.++.||||||+++||+|+||
T Consensus 173 ~~~KgvNlPg~~~~lp~ltekD~~dl-~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nlde 251 (499)
T 3hqn_D 173 SDRRGVNLPGCDVDLPAVSAKDRVDL-QFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDS 251 (499)
T ss_dssp ETTCBEECTTSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHH
T ss_pred eCCCceecCCCCCCCCCCCHHHHHHH-HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHH
Confidence 99999999999999999999999999 99999999999999999999999999999988889999999999999999999
Q ss_pred HHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 248 ILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 248 I~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
|++++|||||||||||+|+|.+++|.+||+|+.+|+++|||||+||||||||++||+|||||++||||||+||+||+|||
T Consensus 252 Il~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLS 331 (499)
T 3hqn_D 252 IIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLS 331 (499)
T ss_dssp HHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred HHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHH
Q 010627 328 GETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVA 407 (505)
Q Consensus 328 ~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls 407 (505)
+|||.|+||+|+|++|++||+++|+.++|...|.......+.+.+..+++|.+|+++|.+++|++|++||.||+||+++|
T Consensus 332 gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~is 411 (499)
T 3hqn_D 332 GETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVA 411 (499)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHH
Confidence 99999999999999999999999999988877776655555556788999999999999999999999999999999999
Q ss_pred hhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEE
Q 010627 408 KYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSV 487 (505)
Q Consensus 408 ~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~V 487 (505)
||||+|||||+ | ++++++|||+|+|||+|++++....+. .++.+++++.|++++++.|++++||.|
T Consensus 412 r~RP~~pIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~~~~~-~~~~d~~~~~a~~~~~~~g~~~~GD~v 477 (499)
T 3hqn_D 412 KYRPNCPIVCV-------T------TRLQTCRQLNITQGVESVFFDADKLGH-DEGKEHRVAAGVEFAKSKGYVQTGDYC 477 (499)
T ss_dssp HTCCSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCHHHHCC-CTTCHHHHHHHHHHHHHTTSCCTTCEE
T ss_pred hhCCCCCEEEE-------c------CCHHHHHHhhccCCeEEEEeccccccc-cCCHHHHHHHHHHHHHHcCCCCCcCEE
Confidence 99999999999 8 999999999999999999987532111 246789999999999999999999999
Q ss_pred EEEeec----CCCceEEEEEcC
Q 010627 488 VALHRV----GTASVIKILNVK 505 (505)
Q Consensus 488 Vvv~g~----g~tn~ikI~~v~ 505 (505)
|+++|+ |+||++||+.|.
T Consensus 478 Vv~~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 478 VVIHADHKVKGYANQTRILLVE 499 (499)
T ss_dssp EEEEECC-----CEEEEEEECC
T ss_pred EEEeCCCCCCCCCeEEEEEEcC
Confidence 999998 899999999873
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=9.5e-137 Score=1093.79 Aligned_cols=473 Identities=51% Similarity=0.836 Sum_probs=447.7
Q ss_pred ccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHc-CCeeEEEEecCCCeeEEeec
Q 010627 12 EKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNT-GILCAVMLDTKGPEIRTGFL 90 (505)
Q Consensus 12 ~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~-~~~v~i~~Dl~GpkiR~g~~ 90 (505)
...|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++ ++|++||+||||||||+|.+
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCCEEEEECCCCCCBBCC-
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEECCCCEEecccC
Confidence 35799999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceecCC
Q 010627 91 KDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGER 170 (505)
Q Consensus 91 ~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~ 170 (505)
.+++++.|++||.|+|++++...|+.+.|++||++|++++++||.||+|||+|.|+|++ ++++.+.|+|++||.|+++
T Consensus 113 ~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~--v~~~~i~~~V~~gG~L~~~ 190 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVE--VGSDYVITQAQNTATIGER 190 (511)
T ss_dssp ----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEE--ECSSEEEEEESSCEEECSS
T ss_pred CCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEE--EeCCEEEEEEEeCeEEcCC
Confidence 87557999999999999986678999999999999999999999999999999999995 5889999999999999999
Q ss_pred CCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh
Q 010627 171 KNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA 250 (505)
Q Consensus 171 Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~ 250 (505)
||||+||..+++|.||+||++||.+|++++|+|||++|||++++||.++|++|.+.|.++.||||||+++|++|+|||++
T Consensus 191 KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~ 270 (511)
T 3gg8_A 191 KNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILA 270 (511)
T ss_dssp CBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHH
T ss_pred cceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHH
Confidence 99999999999999999999999789999999999999999999999999999999889999999999999999999999
Q ss_pred cCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccC
Q 010627 251 NSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGET 330 (505)
Q Consensus 251 ~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Et 330 (505)
++|||||||||||+|+|.+++|.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+||
T Consensus 271 ~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgET 350 (511)
T 3gg8_A 271 EADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGET 350 (511)
T ss_dssp HCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHH
T ss_pred hCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhC
Q 010627 331 AAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYR 410 (505)
Q Consensus 331 a~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~R 410 (505)
|.|+||+|+|++|++||+++|+.++|...|.+.....+.+.+..+++|.+|+++|.+++|++||+||.||+||+++||||
T Consensus 351 A~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~R 430 (511)
T 3gg8_A 351 ANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYR 430 (511)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTC
T ss_pred cCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhC
Confidence 99999999999999999999999888777765544444456788999999999999999999999999999999999999
Q ss_pred CCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEE
Q 010627 411 PGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSVVAL 490 (505)
Q Consensus 411 P~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvv 490 (505)
|.|||||+ | ++++++|||+|+|||+|++++. ..+.+++++.|++++++.|++++||.||++
T Consensus 431 P~~PIia~-------T------~~~~~~r~l~L~~GV~p~~~~~------~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~ 491 (511)
T 3gg8_A 431 PMQPILAL-------S------ASESTIKHLQVIRGVTTMQVPS------FQGTDHVIRNAIVVAKERELVTEGESIVAV 491 (511)
T ss_dssp CSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCC--------CHHHHHHHHHHHHHHTTSCCTTCEEEEE
T ss_pred CCCCEEEE-------c------CCHHHHHHhhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEE
Confidence 99999999 8 9999999999999999999876 467899999999999999999999999999
Q ss_pred eec-----CCCceEEEEEcC
Q 010627 491 HRV-----GTASVIKILNVK 505 (505)
Q Consensus 491 ~g~-----g~tn~ikI~~v~ 505 (505)
+|+ |+||+|||+.|+
T Consensus 492 ~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 492 HGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp EEC------CCEEEEEEECC
T ss_pred eCccCCCCCCCeEEEEEEcC
Confidence 998 799999999985
No 6
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=6.2e-134 Score=1067.95 Aligned_cols=465 Identities=46% Similarity=0.719 Sum_probs=424.4
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEecCCCeeEEeecCCC
Q 010627 14 KPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDG 93 (505)
Q Consensus 14 ~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~g~~~~~ 93 (505)
+|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++++|+|++|++||||||||||.+.++
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 80 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG 80 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCEEEEEecCCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999822
Q ss_pred CcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCc
Q 010627 94 KPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNV 173 (505)
Q Consensus 94 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgv 173 (505)
.++.|++||.|+|+++....|+.+.+++||++|++++++||.||+|||+|.|+|++ ++++.+.|+|++||.|+++|||
T Consensus 81 ~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~--~~~~~i~~~v~~gG~L~~~Kgv 158 (470)
T 1e0t_A 81 NDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLGENKGV 158 (470)
T ss_dssp CCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEE--EETTEEEEEECSCEEECSSCEE
T ss_pred CceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEE--EeCCeEEEEEecCcEEeCCcee
Confidence 36999999999999874457889999999999999999999999999999999995 4899999999999999999999
Q ss_pred ccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhcc-CCCceEEEEecCHHHHhcHHHHHhcC
Q 010627 174 NLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGH-AKNILLMSKVENQEGVANFDDILANS 252 (505)
Q Consensus 174 nlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~-~~~~~IiakIEt~~av~nldeI~~~s 252 (505)
|+||..+++|.||++|.+|| +|++++|+|+|++|||++++|++++++++.+. +.++.|||||||++|++|++||++++
T Consensus 159 NlPg~~~~lp~ltekD~~Di-~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~s 237 (470)
T 1e0t_A 159 NLPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEAS 237 (470)
T ss_dssp ECSSCCCCCCSSCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHS
T ss_pred ecCCCcCCCCCCCcCCHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHC
Confidence 99999999999999999999 99999999999999999999999999999988 88899999999999999999999999
Q ss_pred CeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCC
Q 010627 253 DAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAA 332 (505)
Q Consensus 253 DgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~ 332 (505)
|||||||||||+|+|.++++.+||+|+.+|+++|||+|+||||||||++||+|||||++||+|||+||+||+|||+|||.
T Consensus 238 DgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~ 317 (470)
T 1e0t_A 238 DGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAK 317 (470)
T ss_dssp SEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC---
T ss_pred CEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCC
Q 010627 333 GAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPG 412 (505)
Q Consensus 333 G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~RP~ 412 (505)
|+||+|+|++|++||+++|+.++|...|.... .+.+..+++|.+|+++|.+++|++||+||.||+||+++|||||.
T Consensus 318 G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~----~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~ 393 (470)
T 1e0t_A 318 GKYPLEAVSIMATICERTDRVMNSRLEFNNDN----RKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPD 393 (470)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCCCCCC-------------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCS
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhc----cccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCC
Confidence 99999999999999999999776654443221 12356799999999999999999999999999999999999999
Q ss_pred CcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEee
Q 010627 413 MPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSVVALHR 492 (505)
Q Consensus 413 ~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvv~g 492 (505)
|||||+ | ++++++|||+|+|||+|++++. ..+.+++++.|++++++.|++++||.||+++|
T Consensus 394 ~pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g 454 (470)
T 1e0t_A 394 ATILAL-------T------TNEKTAHQLVLSKGVVPQLVKE------ITSTDDFYRLGKELALQSGLAHKGDVVVMVSG 454 (470)
T ss_dssp SBEEEE-------E------SCHHHHHHGGGSTTEEEEECSC------CCSHHHHHHHHHHHHHHTSSSCTTCEEEEEEC
T ss_pred CCEEEE-------C------CCHHHHHHhhhhccceEEEecC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeC
Confidence 999999 8 9999999999999999999875 56789999999999999999999999999999
Q ss_pred c----CCCceEEEEEc
Q 010627 493 V----GTASVIKILNV 504 (505)
Q Consensus 493 ~----g~tn~ikI~~v 504 (505)
+ |+||++||+.|
T Consensus 455 ~~~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 455 ALVPSGTTNTASVHVL 470 (470)
T ss_dssp SSSCTTCCCEEEEEEC
T ss_pred CCCCCCccceEEEEEC
Confidence 6 89999999875
No 7
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=5.4e-134 Score=1093.48 Aligned_cols=470 Identities=47% Similarity=0.711 Sum_probs=448.1
Q ss_pred ccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEecCCCeeEEeecC
Q 010627 12 EKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLK 91 (505)
Q Consensus 12 ~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~g~~~ 91 (505)
+.+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++++|++||+||||||||||.++
T Consensus 20 ~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vail~Dl~GPkiR~g~~~ 99 (606)
T 3t05_A 20 HMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMK 99 (606)
T ss_dssp --CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCBT
T ss_pred ccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEeecCC
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceecCCC
Q 010627 92 DGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERK 171 (505)
Q Consensus 92 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~K 171 (505)
++ +++|++||.|+|+.+. ..|+.+.+++||++|++++++||+||+|||+|.|+|++++++++.+.|+|++||.|+++|
T Consensus 100 ~~-~i~L~~G~~~~lt~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~K 177 (606)
T 3t05_A 100 DG-IIELERGNEVIVSMNE-VEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKK 177 (606)
T ss_dssp TS-EEECCSSCEEEEESSC-CCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEETTC
T ss_pred CC-CEEEcCCCEEEEEecC-cCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeCCc
Confidence 64 6999999999999874 678889999999999999999999999999999999544678999999999999999999
Q ss_pred CcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc
Q 010627 172 NVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN 251 (505)
Q Consensus 172 gvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~ 251 (505)
|||+|+..+++|.||+||++|| +|++++|+|||++|||++++|++++|++|.+.|.++.||||||+++|++|+|||+++
T Consensus 178 gvNlPg~~~~lp~ltekD~~dl-~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~ 256 (606)
T 3t05_A 178 GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEV 256 (606)
T ss_dssp BEECSSSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHH
T ss_pred eEECCCCccCCCCCChhHHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCC
Q 010627 252 SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETA 331 (505)
Q Consensus 252 sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta 331 (505)
+|||||||||||+|+|.+++|.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||
T Consensus 257 sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA 336 (606)
T 3t05_A 257 SDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETA 336 (606)
T ss_dssp CSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCC
Q 010627 332 AGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRP 411 (505)
Q Consensus 332 ~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~RP 411 (505)
.|+||+|+|++|++||+++|+.++|...|...... .+.+..+++|.+|+++|.+++|++|++||.||+||+++|||||
T Consensus 337 ~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~--~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP 414 (606)
T 3t05_A 337 AGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKL--VETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRP 414 (606)
T ss_dssp SCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH--SCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccc--cCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCC
Confidence 99999999999999999999998887777654321 2356789999999999999999999999999999999999999
Q ss_pred CCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEe
Q 010627 412 GMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSVVALH 491 (505)
Q Consensus 412 ~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvv~ 491 (505)
+|||||+ | ++++++|||+|+|||+|++++. ..+.+++++.|+++++++|++++||.||+++
T Consensus 415 ~~pIia~-------t------~~~~~~r~l~L~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~ 475 (606)
T 3t05_A 415 HSDIIAV-------T------PSEETARQCSIVWGVQPVVKKG------RKSTDALLNNAVATAVETGRVTNGDLIIITA 475 (606)
T ss_dssp SSEEEEE-------E------SCHHHHHHHHTSSSEEEEECCC------CSSHHHHHHHHHHHHHHTTSCCTTCEEEEEE
T ss_pred CCCEEEE-------c------CCHHHHHhhhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHcCCCCCCCEEEEEe
Confidence 9999999 8 9999999999999999999976 4678999999999999999999999999999
Q ss_pred ec-----CCCceEEEEEcC
Q 010627 492 RV-----GTASVIKILNVK 505 (505)
Q Consensus 492 g~-----g~tn~ikI~~v~ 505 (505)
|+ |+||++||+.|.
T Consensus 476 G~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 476 GVPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp CSSTTTCSSCCEEEEEECC
T ss_pred CccCCCCCCccceEEEEec
Confidence 97 899999999874
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.1e-130 Score=1070.49 Aligned_cols=467 Identities=47% Similarity=0.712 Sum_probs=443.0
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEecCCCeeEEeecCCC
Q 010627 14 KPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDG 93 (505)
Q Consensus 14 ~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~g~~~~~ 93 (505)
+|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++++++|++|++||||||||||.+.++
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 81 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENG 81 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTTS
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeCCCCEEEEeccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCc
Q 010627 94 KPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNV 173 (505)
Q Consensus 94 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgv 173 (505)
++.|++||.|+|+++. ..|+++.+++||++|++++++||+||+|||+|.|+|++++.+++.+.|+|++||.|+++|||
T Consensus 82 -~i~l~~G~~~~l~~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgv 159 (587)
T 2e28_A 82 -AIELKEGSKLVISMSE-VLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGV 159 (587)
T ss_dssp -CBCCCSSCEEEEESSC-CCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBE
T ss_pred -cEEEecCCEEEEEecC-cCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCcee
Confidence 5999999999999874 57889999999999999999999999999999999996544889999999999999999999
Q ss_pred ccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCC-CceEEEEecCHHHHhcHHHHHhcC
Q 010627 174 NLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAK-NILLMSKVENQEGVANFDDILANS 252 (505)
Q Consensus 174 nlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakIEt~~av~nldeI~~~s 252 (505)
|+||..+++|.||++|.+|| +|++++|+|||++|||++++|++++++++.+.|. ++.||||||+++|++|+|||++++
T Consensus 160 nlPg~~~~lp~ltekD~~di-~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~ 238 (587)
T 2e28_A 160 NVPGVKVNLPGITEKDRADI-LFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAA 238 (587)
T ss_dssp ECTTSCCCCCSCCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred ecCCCcCCCCCCCcccHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhC
Confidence 99999999999999999999 9999999999999999999999999999998884 899999999999999999999999
Q ss_pred CeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCC
Q 010627 253 DAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAA 332 (505)
Q Consensus 253 DgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~ 332 (505)
|||||||||||+|+|++++|.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||+||+|||+|||.
T Consensus 239 DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~ 318 (587)
T 2e28_A 239 DGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAA 318 (587)
T ss_dssp SEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCC
Q 010627 333 GAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPG 412 (505)
Q Consensus 333 G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~RP~ 412 (505)
|+||+|+|++|++||+++|+.++|...|..... ..+.+..+++|.+|+++|.+++|++|++||.||+||+++|||||+
T Consensus 319 G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~ 396 (587)
T 2e28_A 319 GQYPVEAVKTMHQIALRTEQALEHRDILSQRTK--ESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPK 396 (587)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhc--ccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCC
Confidence 999999999999999999998766444543221 122356899999999999999999999999999999999999999
Q ss_pred CcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEee
Q 010627 413 MPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSVVALHR 492 (505)
Q Consensus 413 ~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvv~g 492 (505)
|||||+ | ++++++|||+|+|||+|++++. ..+.+++++.|++++++.|++++||.|++++|
T Consensus 397 ~pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG 457 (587)
T 2e28_A 397 APIIAV-------T------SNEAVSRRLALVWGVYTKEAPH------VNTTDEMLDVAVDAAVRSGLVKHGDLVVITAG 457 (587)
T ss_dssp SCEEEE-------E------SSHHHHHHGGGSTTEEEEECCC------CCSHHHHHHHHHHHHHHHTCCCTTCEEEEEEC
T ss_pred CCEEEE-------C------CCHHHHHHHHHhcCceEEeccc------cCCHHHHHHHHHHHHHhCCcccccceEEEecC
Confidence 999999 8 9999999999999999999875 56789999999999999999999999999999
Q ss_pred c-----CCCceEEEEEc
Q 010627 493 V-----GTASVIKILNV 504 (505)
Q Consensus 493 ~-----g~tn~ikI~~v 504 (505)
. |+||++|+..+
T Consensus 458 ~P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 458 VPVGETGSTNLMKVHVI 474 (587)
T ss_dssp SSCSSCCCCCEEEEEEC
T ss_pred cccCcCCCCceEEEEEE
Confidence 6 78999999765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.2e-130 Score=1032.54 Aligned_cols=445 Identities=30% Similarity=0.417 Sum_probs=424.1
Q ss_pred cccCCCeEEEEecCCCCCCHH--HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEecCCCeeEEe
Q 010627 11 IEKKPKTKIVCTLGPASRSVP--MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTG 88 (505)
Q Consensus 11 ~~~~r~tkIi~TiGp~~~~~~--~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~g 88 (505)
+.++|||||||||||+|+++| +|++|+++ |||||||||||++++|+++|+++|++++++|+|++||+||||||||||
T Consensus 11 ~~~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g 89 (461)
T 3qtg_A 11 LRARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVG 89 (461)
T ss_dssp -CCSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBCC
T ss_pred hhccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEEeCCCCEEEEC
Confidence 345799999999999999999 99999999 999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceec
Q 010627 89 FLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 168 (505)
Q Consensus 89 ~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~ 168 (505)
.+. +++|++||.|+|+++.. .++ +.+++||++|++++++||.||+|||+|.|+|++ ++++.+.|+|++||.|+
T Consensus 90 ~~~---~v~L~~G~~~~lt~~~~-~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~--~~~~~v~~~V~~gG~L~ 162 (461)
T 3qtg_A 90 STS---PINVQEGEVVKFKLSDK-SDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTN--TGSDWIEAVAESSGVIT 162 (461)
T ss_dssp BCS---CEEECTTCEEEEEECSB-CCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEE--ECSSEEEEEESSCEEEC
T ss_pred CCC---CEEEeCCCEEEEEecCC-CCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEE--EECCEEEEEEEECCEec
Confidence 995 39999999999998753 344 789999999999999999999999999999995 58899999999999999
Q ss_pred CCCCcccCCccccCCCCChhcHHHHHh--cccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHH
Q 010627 169 ERKNVNLPGVIVDLPTLTEKDKEDILK--WGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFD 246 (505)
Q Consensus 169 s~Kgvnlp~~~~~l~~lte~D~~di~~--~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nld 246 (505)
++||||+||..+++|.||+||++|| + |++++|+|||++|||++++|+.++|++|.+.|.++.|||||||++|++|+|
T Consensus 163 ~~KgvNlPg~~~~lp~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nld 241 (461)
T 3qtg_A 163 GGKAIVVEGKDYDISTPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLE 241 (461)
T ss_dssp TTCBEEETTCCCCCCSSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHH
T ss_pred CCCceecCCCCCCCCCCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHH
Confidence 9999999999999999999999999 9 999999999999999999999999999999998999999999999999999
Q ss_pred HHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 247 DILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 247 eI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
||++++|||||||||||+|+|.++++.+||+|+.+|+++|||||+||||||||++||+|||||++||+|||+||+||+||
T Consensus 242 eIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavML 321 (461)
T 3qtg_A 242 ELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWL 321 (461)
T ss_dssp HHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHH
Q 010627 327 SGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLV 406 (505)
Q Consensus 327 s~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~l 406 (505)
|+|||.|+||+|+|++|++||+++|+...|. +.+.+..+++|.+|+++|.+++|+ |++||.||+||+++
T Consensus 322 SgETA~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T~SG~tA~~v 390 (461)
T 3qtg_A 322 TNETASGKYPLAAVSWLSRILMNVEYQIPQS----------PLLQNSRDRFAKGLVELAQDLGAN-ILVFSMSGTLARRI 390 (461)
T ss_dssp CHHHHTSSCHHHHHHHHHHHHHTCCCCCCCC----------CCCCSHHHHHHHHHHHHHHHHTCE-EEEECSSSHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHhhhhhc----------cCCCCHHHHHHHHHHHHHHhcCCC-EEEECCCcHHHHHH
Confidence 9999999999999999999999999976552 234567899999999999999999 99999999999999
Q ss_pred HhhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCE
Q 010627 407 AKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDS 486 (505)
Q Consensus 407 s~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~ 486 (505)
|||||.|||||+ | ++++++|||+|+|||+|++++ ..+.|++++.|++++++.|
T Consensus 391 sr~RP~~pIia~-------T------~~~~~~r~l~l~~GV~p~~~~-------~~~~d~~~~~a~~~~~~~g------- 443 (461)
T 3qtg_A 391 AKFRPRGVVYVG-------T------PNVRVARSLSIVWALEPLYIP-------AENYEEGLEKLISLKGTTP------- 443 (461)
T ss_dssp HTTCCSSCEEEE-------E------SCHHHHHHHTTSTTEEEEECC-------CSSHHHHHHHHHHHHCCSS-------
T ss_pred HhhCCCCCEEEe-------C------CCHHHHhhceeccceEEEEeC-------CCCHHHHHHHHHHHHHHCC-------
Confidence 999999999999 8 999999999999999999987 2568899999999999988
Q ss_pred EEEEeec-CCCceEEEE
Q 010627 487 VVALHRV-GTASVIKIL 502 (505)
Q Consensus 487 VVvv~g~-g~tn~ikI~ 502 (505)
||+++|. |+||++||+
T Consensus 444 vvit~g~p~~TN~~~v~ 460 (461)
T 3qtg_A 444 FVATYGIRGGVHSVKVK 460 (461)
T ss_dssp EEEEECCTTSCCEEEEE
T ss_pred EEEEeccCCCCeEEEEE
Confidence 8888888 999999996
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=8.5e-130 Score=1044.10 Aligned_cols=477 Identities=41% Similarity=0.681 Sum_probs=450.6
Q ss_pred ccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcC-CeeEEEEecCCCeeEEeec
Q 010627 12 EKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTG-ILCAVMLDTKGPEIRTGFL 90 (505)
Q Consensus 12 ~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~-~~v~i~~Dl~GpkiR~g~~ 90 (505)
.++|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|+++++++ +|++|++||||||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 356999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEecCC--CCCCccEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEee-eCCeEEEEEeeCcee
Q 010627 91 KDGKPIQLKQGQEITISTDYT--IKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNV-KAGLVKCRCENSAML 167 (505)
Q Consensus 91 ~~~~~i~l~~G~~v~l~~~~~--~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~-~~~~i~~~v~~gG~l 167 (505)
++++++.|++||.|+|+++.. ..|+.+.+++||++|+++|++||.||+|||+|.|+|+ ++ +++.+.|+|++||.|
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~--~~~~~~~v~~~v~~gG~L 173 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVL--EVVDDKTLKVKALNAGKI 173 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECC--BCCC--CEEEEBCSCCCC
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEE--EEccCCeEEEEEecCCEE
Confidence 876579999999999998743 4788999999999999999999999999999999999 45 788999999999999
Q ss_pred cCCCCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHH
Q 010627 168 GERKNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDD 247 (505)
Q Consensus 168 ~s~Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nlde 247 (505)
+++||||+||..+++|.||++|.+|| +|+++.|+|+|++|||++++|++++++++.+.+.++.|||||||++|++|++|
T Consensus 174 ~~~KgvNlPg~~~~lp~lt~~D~~DI-~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nlde 252 (500)
T 1a3w_A 174 CSHKGVNLPGTDVDLPALSEKDKEDL-RFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDE 252 (500)
T ss_dssp CSSCBEECTTCCCCCCSSCHHHHHHH-HHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHH
T ss_pred eCCCCCcCCCCccCCCCCChhHHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHH
Confidence 99999999999999999999999999 99999999999999999999999999999888889999999999999999999
Q ss_pred HHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 248 ILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 248 I~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
|++++|||||||||||+|+|.++++.+|++|+.+|+++|||+|+||||||||+.+|.|||||++|++|++.+|+|++|||
T Consensus 253 I~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs 332 (500)
T 1a3w_A 253 ILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLS 332 (500)
T ss_dssp HHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBS
T ss_pred HHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHH
Q 010627 328 GETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVA 407 (505)
Q Consensus 328 ~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls 407 (505)
+||+.|+||+|+|++|++||+++|+.++|...|.......+.+.+..+++|.+|+++|.+++|++||+||.||+||+++|
T Consensus 333 ~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~is 412 (500)
T 1a3w_A 333 GETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVS 412 (500)
T ss_dssp TTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHH
T ss_pred chhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHH
Confidence 99999999999999999999999998877666665432122234668999999999999999999999999999999999
Q ss_pred hhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEE
Q 010627 408 KYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIELGKKKGLCKKGDSV 487 (505)
Q Consensus 408 ~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~V 487 (505)
||||+|||||+ | ++++++|||+|+|||+|++++......|.++.+++++.|+++++++|++++||.|
T Consensus 413 r~RP~~pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~v 479 (500)
T 1a3w_A 413 KYRPNCPIILV-------T------RCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTY 479 (500)
T ss_dssp HTCCSSCEEEE-------E------SCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEE
T ss_pred hhCCCCCEEEE-------c------CCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCEE
Confidence 99999999999 8 9999999999999999999987656678888999999999999999999999999
Q ss_pred EEEeec----CCCceEEEEEc
Q 010627 488 VALHRV----GTASVIKILNV 504 (505)
Q Consensus 488 Vvv~g~----g~tn~ikI~~v 504 (505)
|+++|+ |+||+|||+.|
T Consensus 480 vv~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 480 VSIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp EEEECCCTTTCCCCEEEEEEC
T ss_pred EEEecccCCCCCCceEEEEEC
Confidence 999997 89999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.74 E-value=1e-18 Score=179.70 Aligned_cols=147 Identities=12% Similarity=0.127 Sum_probs=127.4
Q ss_pred HHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhcc--------------------------------CCCceEEEEecC
Q 010627 191 EDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGH--------------------------------AKNILLMSKVEN 238 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~--------------------------------~~~~~IiakIEt 238 (505)
.+| +++++.|+++|++|||+|++|++++++++... +.++.|++||||
T Consensus 108 ~di-~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 108 VSL-STALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHH-HHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 578 88899999999999999999999999988531 124789999999
Q ss_pred HHHHhcHHHHHhc--CCeeEEecCcccCc--------CCc---hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC
Q 010627 239 QEGVANFDDILAN--SDAFMVARGDLGME--------IPI---EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRP 305 (505)
Q Consensus 239 ~~av~nldeI~~~--sDgImIaRgDLg~e--------~~~---~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~p 305 (505)
++|+.|+++|+++ .|+++||++||+.+ +|. +.+..++++++.+|+++|||++..+ ..|
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~ 257 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV 257 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH
Confidence 9999999999975 79999999999999 886 7899999999999999999997543 122
Q ss_pred ChHHHHHHHHHHHcCCceeeecccCCC--CCCHHHHHHHHHHHHHHHhcc
Q 010627 306 TRAEATDVANAVLDGTDCVMLSGETAA--GAYPEVAVRTMAQICVEAEST 353 (505)
Q Consensus 306 traEv~Dv~nav~~G~D~imLs~Eta~--G~yP~~~V~~m~~i~~~aE~~ 353 (505)
.++.+++..|+|+++++.++.. +.| .+.|+++++|+.++|..
T Consensus 258 -----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 258 -----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp -----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred -----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 4678899999999999998876 666 78999999999888874
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.67 E-value=2.8e-18 Score=171.11 Aligned_cols=127 Identities=17% Similarity=0.190 Sum_probs=106.8
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhc---------------------------cCCCceEEEEecCHHH
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGG---------------------------HAKNILLMSKVENQEG 241 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~---------------------------~~~~~~IiakIEt~~a 241 (505)
|..+| +++++.|+++|++|||+|++|++++.+.++. .+.++.+++||||++|
T Consensus 79 ~~~~i-~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~a 157 (267)
T 2vws_A 79 SKPLI-KQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTA 157 (267)
T ss_dssp CHHHH-HHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHH
T ss_pred CHHHH-HHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHH
Confidence 34678 8889999999999999999999999887741 1124789999999999
Q ss_pred HhcHHHHHhc--CCeeEEecCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHH
Q 010627 242 VANFDDILAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDV 313 (505)
Q Consensus 242 v~nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv 313 (505)
+.|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ . .| ...
T Consensus 158 v~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~-------~--d~-----~~a 223 (267)
T 2vws_A 158 LDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA-------V--AP-----DMA 223 (267)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC-------S--SH-----HHH
T ss_pred HHHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec-------C--CH-----HHH
Confidence 9999999987 79999999999999986 5789999999999999999998631 1 12 244
Q ss_pred HHHHHcCCceeeecccC
Q 010627 314 ANAVLDGTDCVMLSGET 330 (505)
Q Consensus 314 ~nav~~G~D~imLs~Et 330 (505)
..++..|++.+..+.++
T Consensus 224 ~~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 224 QQCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHCCCCEEEEchHH
Confidence 66788999999887664
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.66 E-value=8e-17 Score=162.14 Aligned_cols=128 Identities=15% Similarity=0.162 Sum_probs=106.8
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhc-----c----------------------CCCceEEEEecCHH
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGG-----H----------------------AKNILLMSKVENQE 240 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~-----~----------------------~~~~~IiakIEt~~ 240 (505)
.|..|| +++++.|+++|++|||+|++|++++.+.++. + +.++.+++||||++
T Consensus 99 ~d~~di-~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~ 177 (287)
T 2v5j_A 99 NDPVQI-KQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SCHHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCHHHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHH
Confidence 344588 8899999999999999999999999887631 1 12478999999999
Q ss_pred HHhcHHHHHhc--CCeeEEecCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHH
Q 010627 241 GVANFDDILAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATD 312 (505)
Q Consensus 241 av~nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~D 312 (505)
|++|+++|+++ .|+++||++||+.+++. +++..++++++.+|+++|||+++.+ ..| ..
T Consensus 178 av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~---------~d~-----~~ 243 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI---------ANE-----QL 243 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC---------CCH-----HH
T ss_pred HHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec---------CCH-----HH
Confidence 99999999985 69999999999999986 5789999999999999999997621 122 24
Q ss_pred HHHHHHcCCceeeecccC
Q 010627 313 VANAVLDGTDCVMLSGET 330 (505)
Q Consensus 313 v~nav~~G~D~imLs~Et 330 (505)
...++..|++.+.++.++
T Consensus 244 a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 244 AKRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHHTTCSEEEEEEHH
T ss_pred HHHHHHhCCCEEEECcHH
Confidence 466788999999888664
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.63 E-value=3.7e-16 Score=155.27 Aligned_cols=127 Identities=20% Similarity=0.241 Sum_probs=107.7
Q ss_pred HHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhc---------------------------cCCCceEEEEecCHHHHh
Q 010627 191 EDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGG---------------------------HAKNILLMSKVENQEGVA 243 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~---------------------------~~~~~~IiakIEt~~av~ 243 (505)
.|| +++++.|+|+|++|||+|++|++++.+.++. .+.++.++++|||++|+.
T Consensus 79 ~di-~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~ 157 (261)
T 3qz6_A 79 AHV-QRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVE 157 (261)
T ss_dssp HHH-HHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred HHH-HHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHH
Confidence 488 8889999999999999999999999988731 134689999999999999
Q ss_pred cHHHHHhc--CCeeEEecCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH
Q 010627 244 NFDDILAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN 315 (505)
Q Consensus 244 nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n 315 (505)
|+++|+++ .|+++||++||+.+++. +.+..++++++.+|+++|||+++.+ ..|..++ ..
T Consensus 158 ~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~~ 224 (261)
T 3qz6_A 158 DIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----GW 224 (261)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----HH
T ss_pred HHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----HH
Confidence 99999965 79999999999999986 3799999999999999999998743 1344432 34
Q ss_pred HHHcCCceeeecccCC
Q 010627 316 AVLDGTDCVMLSGETA 331 (505)
Q Consensus 316 av~~G~D~imLs~Eta 331 (505)
.+..|++.+.++.++.
T Consensus 225 ~~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 225 AVERGAQMLLWSGDVA 240 (261)
T ss_dssp HHHTTCCEEEEEEHHH
T ss_pred HHHCCCCEEEEhhHHH
Confidence 5789999999998753
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.63 E-value=8e-16 Score=152.33 Aligned_cols=127 Identities=20% Similarity=0.223 Sum_probs=107.4
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhc--------------------------cCCCceEEEEecCHHHH
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGG--------------------------HAKNILLMSKVENQEGV 242 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~--------------------------~~~~~~IiakIEt~~av 242 (505)
|..+| +++++.|+++|++|||+|++|++++.+.++. .+.++.++++|||++|+
T Consensus 80 ~~~~i-~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av 158 (256)
T 1dxe_A 80 EPVII-KRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGV 158 (256)
T ss_dssp CHHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHH
T ss_pred CHHHH-HHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHH
Confidence 44457 8889999999999999999999999988741 13568899999999999
Q ss_pred hcHHHHHhc--CCeeEEecCcccCcCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHH
Q 010627 243 ANFDDILAN--SDAFMVARGDLGMEIPI------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA 314 (505)
Q Consensus 243 ~nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~ 314 (505)
.|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ . + -.+..
T Consensus 159 ~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~-------~----d---~~~~~ 224 (256)
T 1dxe_A 159 DNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA-------P----V---EADAR 224 (256)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC-------C----S---HHHHH
T ss_pred HhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec-------C----C---HHHHH
Confidence 999999984 79999999999999986 5799999999999999999997621 1 1 22446
Q ss_pred HHHHcCCceeeecccC
Q 010627 315 NAVLDGTDCVMLSGET 330 (505)
Q Consensus 315 nav~~G~D~imLs~Et 330 (505)
.++..|++.+.++.++
T Consensus 225 ~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 225 RYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHTTCCEEEEEEHH
T ss_pred HHHHcCCCEEEechHH
Confidence 6889999999988664
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.58 E-value=5.1e-15 Score=148.58 Aligned_cols=132 Identities=11% Similarity=0.157 Sum_probs=108.5
Q ss_pred hhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc--CCeeEEecCcccC
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN--SDAFMVARGDLGM 264 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--sDgImIaRgDLg~ 264 (505)
+++..|| +++++ |+++|++|||+|++|++++++++...|.++.++++|||++|+.|+++|++. .|++++|++||+.
T Consensus 81 ~~~~~dl-~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~ 158 (284)
T 1sgj_A 81 PYFEDDL-SVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTT 158 (284)
T ss_dssp TTHHHHG-GGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHH
T ss_pred HhHHHHH-HHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHH
Confidence 6688899 99999 999999999999999999999997766678999999999999999999963 6999999999999
Q ss_pred cCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 265 EIPI------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 265 e~~~------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
+++. +.+..++++++.+|+++|||++.. +.....-...-..+...+...|+||=+.
T Consensus 159 ~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 159 DLGGKRTPGGLEVLYARSQVALAARLTGVAALDI------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 9987 679999999999999999998531 1000000011114566788899987555
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.35 E-value=1.5e-12 Score=133.10 Aligned_cols=135 Identities=18% Similarity=0.143 Sum_probs=111.1
Q ss_pred cCCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhc-----------cCCCceEEEEecCHHHHhcHHHHH
Q 010627 181 DLPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGG-----------HAKNILLMSKVENQEGVANFDDIL 249 (505)
Q Consensus 181 ~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~-----------~~~~~~IiakIEt~~av~nldeI~ 249 (505)
.-|.+.+.|...| ..+++.|.+.|++|+|+|+++++++++++.+ .+.++.++++||++.|+.|+++|+
T Consensus 116 ~~p~~~~~ql~Ai-~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia 194 (324)
T 2xz9_A 116 DRPDIFKTQLRAI-LRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILA 194 (324)
T ss_dssp HCHHHHHHHHHHH-HHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHT
T ss_pred cchhhHHHHHHHH-HHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHH
Confidence 3456677888899 8889999999999999999999888887741 234689999999999999999999
Q ss_pred hcCCeeEEecCcccCc-CC---------------chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHH
Q 010627 250 ANSDAFMVARGDLGME-IP---------------IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDV 313 (505)
Q Consensus 250 ~~sDgImIaRgDLg~e-~~---------------~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv 313 (505)
++.|+++||..||+.. ++ .+.|..+.++++.+|+++|||+.+++++- . .| ..+
T Consensus 195 ~~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~----~--dp-----~~~ 263 (324)
T 2xz9_A 195 KEVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA----G--DP-----LAA 263 (324)
T ss_dssp TTCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG----G--CH-----HHH
T ss_pred HhCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC----C--CH-----HHH
Confidence 9999999999999953 33 24688899999999999999999987742 1 12 344
Q ss_pred HHHHHcCCceeeec
Q 010627 314 ANAVLDGTDCVMLS 327 (505)
Q Consensus 314 ~nav~~G~D~imLs 327 (505)
..++..|+|.+..+
T Consensus 264 ~~l~~lG~~~~si~ 277 (324)
T 2xz9_A 264 VILLGLGLDEFSMS 277 (324)
T ss_dssp HHHHHHTCCEEEEC
T ss_pred HHHHHCCCCEEEEC
Confidence 66788999997665
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.24 E-value=2.1e-11 Score=124.25 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=107.6
Q ss_pred ccCCCCC-hhcHHHHHhcccccCC--CEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc---CC
Q 010627 180 VDLPTLT-EKDKEDILKWGIPNQI--DMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN---SD 253 (505)
Q Consensus 180 ~~l~~lt-e~D~~di~~~al~~g~--d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~---sD 253 (505)
++++.+. ++-..|| +..++.|. |+|.+|+|++++|++.+.+++...+.++.++++|||++|+.|+++|++. .|
T Consensus 106 VRVn~~~t~~~~~Dl-~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~ 184 (316)
T 3qll_A 106 LRINGLDTRAGIEDI-HALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLA 184 (316)
T ss_dssp EECCCTTSHHHHHHH-HHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEE
T ss_pred EEECCCCCchhHHHH-HHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCce
Confidence 4454443 5556788 77788875 9999999999999999999998777789999999999999999999984 48
Q ss_pred eeEEecCcccCcCCc----hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCCh-HHHHHHHHHHHcCCceeee
Q 010627 254 AFMVARGDLGMEIPI----EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTR-AEATDVANAVLDGTDCVML 326 (505)
Q Consensus 254 gImIaRgDLg~e~~~----~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptr-aEv~Dv~nav~~G~D~imL 326 (505)
++++|..||..+++. +.+..+..+++.+|+++|++++.. - ....-.. .-..++..+...|++|=+.
T Consensus 185 ~l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~-v------~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 185 GLIFGAADMAADIGAASTWEPLALARARLVSACAMNGIPAIDA-P------FFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp EEEECHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC-C------CSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEECHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec-c------ccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 999999999999986 367788899999999999998532 1 1111111 1135667788899987655
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.13 E-value=9.3e-11 Score=117.06 Aligned_cols=124 Identities=12% Similarity=0.100 Sum_probs=97.7
Q ss_pred hhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc--CCeeEEecCcccC
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN--SDAFMVARGDLGM 264 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--sDgImIaRgDLg~ 264 (505)
++-..|| +..++.|+++|.+|+|++++|++.+. ++.++++|||++|+.|+++|+.. .|++++|+.||+.
T Consensus 71 ~~~~~dl-~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~ 141 (273)
T 1u5h_A 71 ADQARDL-EALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIA 141 (273)
T ss_dssp HHHHHHH-HHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHH
T ss_pred hHHHHHH-HHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHH
Confidence 3445677 77788999999999999999999763 67899999999999999999964 3799999999999
Q ss_pred cCCch-----------hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHH-HHHHHHHHHcCCceeee
Q 010627 265 EIPIE-----------KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAE-ATDVANAVLDGTDCVML 326 (505)
Q Consensus 265 e~~~~-----------~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraE-v~Dv~nav~~G~D~imL 326 (505)
+++.. .+..+..+++.+|+++|++++... .....+.+- ..+...+...|+||-+.
T Consensus 142 ~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v-------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 142 TLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAV-------HLDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp HHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECC-------CSCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCC-------cCCCCCHHHHHHHHHHHHhCCCCceee
Confidence 98752 377888999999999999886321 111111111 14667788899998777
No 20
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.12 E-value=1e-10 Score=119.95 Aligned_cols=132 Identities=11% Similarity=0.037 Sum_probs=98.6
Q ss_pred hhcHHHHHhccccc---CCCEEEEcCCCChhHHHHHHHHHhcc----C--CCceEEEEecCHHHHhcHHHHHhc--CCee
Q 010627 187 EKDKEDILKWGIPN---QIDMIALSFVRKGSDLVGVRKLLGGH----A--KNILLMSKVENQEGVANFDDILAN--SDAF 255 (505)
Q Consensus 187 e~D~~di~~~al~~---g~d~V~~sfV~sa~dv~~v~~~l~~~----~--~~~~IiakIEt~~av~nldeI~~~--sDgI 255 (505)
++-..|| ...++. |+|+|.+|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|++. .|++
T Consensus 95 ~~~~~DL-~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 95 PAWRQDV-DIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp TTHHHHH-HHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred hHHHHHH-HHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 3444555 555554 99999999999999999999888532 2 368899999999999999999954 4899
Q ss_pred EEecCcccCcCCc---------------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHH-HHHHHHHH-H
Q 010627 256 MVARGDLGMEIPI---------------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAE-ATDVANAV-L 318 (505)
Q Consensus 256 mIaRgDLg~e~~~---------------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraE-v~Dv~nav-~ 318 (505)
++|..||..+++. +.+..++.+++.+|+++|+++|.. + .+......- ..+...+. .
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~ 246 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN------V-CLNLKDAEVIASDACRARNE 246 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC------C-CSCSSCHHHHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC------C-cccccCHHHHHHHHHHHHHh
Confidence 9999999988864 126678899999999999998642 1 111111111 14566677 7
Q ss_pred cCCceeee
Q 010627 319 DGTDCVML 326 (505)
Q Consensus 319 ~G~D~imL 326 (505)
.|+||=+.
T Consensus 247 lGf~Gk~~ 254 (332)
T 3qqw_A 247 FGFLRMWS 254 (332)
T ss_dssp HCCCEEEE
T ss_pred CCCCcccc
Confidence 89997665
No 21
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.12 E-value=9.1e-11 Score=132.80 Aligned_cols=134 Identities=19% Similarity=0.162 Sum_probs=112.1
Q ss_pred CChhcHHHHHhcccc-cC--CCEEEEcCCCChhHHHHHHHHHhccCC----C-ceEEEEecCHHHHhcHHHHHhcCCeeE
Q 010627 185 LTEKDKEDILKWGIP-NQ--IDMIALSFVRKGSDLVGVRKLLGGHAK----N-ILLMSKVENQEGVANFDDILANSDAFM 256 (505)
Q Consensus 185 lte~D~~di~~~al~-~g--~d~V~~sfV~sa~dv~~v~~~l~~~~~----~-~~IiakIEt~~av~nldeI~~~sDgIm 256 (505)
+.+.+.+.| ..+.+ +| .+.|++|||+++++++++++.+...+. + +.++++||++.|+.|+|+|++..|++.
T Consensus 622 ~~~~ql~Ai-~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~s 700 (794)
T 2ols_A 622 CFALECKAL-KRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFS 700 (794)
T ss_dssp HHHHHHHHH-HHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEE
T ss_pred HHHHHHHHH-HHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 456678888 77888 68 789999999999999999999975542 3 889999999999999999999999999
Q ss_pred EecCcccCc-CCc---------------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcC
Q 010627 257 VARGDLGME-IPI---------------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 320 (505)
Q Consensus 257 IaRgDLg~e-~~~---------------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G 320 (505)
||..||+.. ++. +.|..+.++++.+|+++|||+.++.|+--. .| ..+..++..|
T Consensus 701 iGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp-----~~~~~~~~~G 770 (794)
T 2ols_A 701 IGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSD-----HP-----DFAKWLVEEG 770 (794)
T ss_dssp EEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CH-----HHHHHHHHHT
T ss_pred ECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCC-----CH-----HHHHHHHHCC
Confidence 999999987 664 468899999999999999999998876420 11 1246678899
Q ss_pred Cceeeeccc
Q 010627 321 TDCVMLSGE 329 (505)
Q Consensus 321 ~D~imLs~E 329 (505)
+|.+.++..
T Consensus 771 ~~~~s~~p~ 779 (794)
T 2ols_A 771 IESVSLNPD 779 (794)
T ss_dssp CCEEEECGG
T ss_pred CCEEEECHh
Confidence 999988643
No 22
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.04 E-value=4.7e-10 Score=115.26 Aligned_cols=130 Identities=15% Similarity=0.094 Sum_probs=93.9
Q ss_pred cHHHHHhccccc---CCCEEEEcCCCChhHHHHHHHHHhcc----C--CCceEEEEecCHHHHhcHHHHHhc--CCeeEE
Q 010627 189 DKEDILKWGIPN---QIDMIALSFVRKGSDLVGVRKLLGGH----A--KNILLMSKVENQEGVANFDDILAN--SDAFMV 257 (505)
Q Consensus 189 D~~di~~~al~~---g~d~V~~sfV~sa~dv~~v~~~l~~~----~--~~~~IiakIEt~~av~nldeI~~~--sDgImI 257 (505)
-..|| ...++. |+|+|++|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|++. .|++++
T Consensus 96 ~~~DL-~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~ 174 (339)
T 3r4i_A 96 WRDDV-RLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSF 174 (339)
T ss_dssp HHHHH-HHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEE
T ss_pred HHHHH-HHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEE
Confidence 34455 444443 89999999999999999998887532 2 358899999999999999999954 489999
Q ss_pred ecCcccCcCCch---------------hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH-HHHHHHHHH-HcC
Q 010627 258 ARGDLGMEIPIE---------------KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRA-EATDVANAV-LDG 320 (505)
Q Consensus 258 aRgDLg~e~~~~---------------~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptra-Ev~Dv~nav-~~G 320 (505)
|..||..+++.. .+..++.+++.+|+++|++++.. . ....-..+ -..+...+. ..|
T Consensus 175 G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~lG 247 (339)
T 3r4i_A 175 GLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN------V-STEVRDMSVVANDAARARNEFG 247 (339)
T ss_dssp CHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC------C-CCCSSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC------C-CcCCCChHHHHHHHHHHHHhCC
Confidence 999999888641 15678889999999999998631 0 11111111 113445564 689
Q ss_pred Cceeee
Q 010627 321 TDCVML 326 (505)
Q Consensus 321 ~D~imL 326 (505)
+||=+.
T Consensus 248 f~Gk~~ 253 (339)
T 3r4i_A 248 YTRMWS 253 (339)
T ss_dssp CSEEEE
T ss_pred CCccee
Confidence 997655
No 23
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.03 E-value=5.5e-10 Score=121.86 Aligned_cols=135 Identities=14% Similarity=0.081 Sum_probs=109.4
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHh-------ccC----CCceEEEEecCHHHHhcHHHHHhc
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLG-------GHA----KNILLMSKVENQEGVANFDDILAN 251 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~-------~~~----~~~~IiakIEt~~av~nldeI~~~ 251 (505)
|.+.+.+...| ..+.+.|...|++|||+++++++++++++. +.| .++.+.++||+|.|+.++|+|++.
T Consensus 367 p~if~~QlrAi-~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~ 445 (575)
T 2hwg_A 367 REILRDQLRAI-LRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKE 445 (575)
T ss_dssp HHHHHHHHHHH-HHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTT
T ss_pred hHHHHHHHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 44455566788 788889999999999999999998888773 122 368899999999999999999999
Q ss_pred CCeeEEecCcccC----------cCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH
Q 010627 252 SDAFMVARGDLGM----------EIPI------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN 315 (505)
Q Consensus 252 sDgImIaRgDLg~----------e~~~------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n 315 (505)
.|++.||..||+. .++. +.|..+.++++.+|+++|||+.++.++- ..|.- +..
T Consensus 446 vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~a------gdp~~-----~~~ 514 (575)
T 2hwg_A 446 VDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELA------GDERA-----TLL 514 (575)
T ss_dssp CSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTT------TCTTT-----HHH
T ss_pred CCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCC------CCHHH-----HHH
Confidence 9999999999998 5442 5788899999999999999999987622 23433 356
Q ss_pred HHHcCCceeeeccc
Q 010627 316 AVLDGTDCVMLSGE 329 (505)
Q Consensus 316 av~~G~D~imLs~E 329 (505)
.+..|+|.+..+..
T Consensus 515 l~~lG~~~~S~~p~ 528 (575)
T 2hwg_A 515 LLGMGLDEFSMSAI 528 (575)
T ss_dssp HHHTTCCEEEECGG
T ss_pred HHHCCCCEEEECcc
Confidence 78899999777633
No 24
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.01 E-value=6.6e-10 Score=121.18 Aligned_cols=133 Identities=17% Similarity=0.056 Sum_probs=107.4
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHh-----------ccCCCceEEEEecCHHHHhcHHHHHhc
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLG-----------GHAKNILLMSKVENQEGVANFDDILAN 251 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~-----------~~~~~~~IiakIEt~~av~nldeI~~~ 251 (505)
|.+.+.+...| ..+.+.|...|++|+|+++++++++++++. ..+.++.+.++||+|.|+.++|+|++.
T Consensus 369 p~if~~QlrAi-~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~ 447 (572)
T 2wqd_A 369 QDIFRPQLRAL-LRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKE 447 (572)
T ss_dssp HHHHHHHHHHH-HHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHH
T ss_pred hHHHHHHHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHh
Confidence 34444556778 788889999999999999999999888773 123468899999999999999999999
Q ss_pred CCeeEEecCcccCc-CC---------------chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH
Q 010627 252 SDAFMVARGDLGME-IP---------------IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN 315 (505)
Q Consensus 252 sDgImIaRgDLg~e-~~---------------~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n 315 (505)
.|++.||..||+.- ++ .+.|..+.++++.+|+++|||+.++.++- ..|.-+ ..
T Consensus 448 vDf~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~~-----~~ 516 (572)
T 2wqd_A 448 VDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETAI-----PL 516 (572)
T ss_dssp CSEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTTH-----HH
T ss_pred CCEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHHH-----HH
Confidence 99999999999832 21 24688899999999999999999987733 234443 56
Q ss_pred HHHcCCceeeec
Q 010627 316 AVLDGTDCVMLS 327 (505)
Q Consensus 316 av~~G~D~imLs 327 (505)
++..|+|.+..+
T Consensus 517 l~~lG~~~~S~~ 528 (572)
T 2wqd_A 517 LLGLGLDEFSMS 528 (572)
T ss_dssp HHHHTCCEEEEC
T ss_pred HHHCCCCEEEec
Confidence 788899998876
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.88 E-value=3.8e-09 Score=110.62 Aligned_cols=133 Identities=8% Similarity=-0.023 Sum_probs=102.8
Q ss_pred Chh-cHHHHHhcccc------cCCCEEEEcCCCChhHHHHHHHHHhcc----C---CCceEEEEecCHHH---HhcHHHH
Q 010627 186 TEK-DKEDILKWGIP------NQIDMIALSFVRKGSDLVGVRKLLGGH----A---KNILLMSKVENQEG---VANFDDI 248 (505)
Q Consensus 186 te~-D~~di~~~al~------~g~d~V~~sfV~sa~dv~~v~~~l~~~----~---~~~~IiakIEt~~a---v~nldeI 248 (505)
|.+ ..+|| ...+. .++|+|.+|+|++++++..+.+++... | ..+.++++|||++| +.|+++|
T Consensus 94 T~~~~~~DL-~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eI 172 (433)
T 3oyz_A 94 TRYQGFQHM-LDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDE 172 (433)
T ss_dssp HHHHHHHHH-HHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHH
T ss_pred ChhccHHHH-HHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHH
Confidence 344 56677 66565 789999999999999999998887532 2 25789999999999 9999999
Q ss_pred HhcC-------CeeEEecCcccCcCCch-------hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH-HHHHH
Q 010627 249 LANS-------DAFMVARGDLGMEIPIE-------KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRA-EATDV 313 (505)
Q Consensus 249 ~~~s-------DgImIaRgDLg~e~~~~-------~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptra-Ev~Dv 313 (505)
++++ +++++|+.||..+++.. .+..+..+++.+|+++|++++..- .+..-..+ =..+.
T Consensus 173 Aaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDgV-------~~di~D~egL~~ea 245 (433)
T 3oyz_A 173 MGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGP-------YDDIRDVEGYRERM 245 (433)
T ss_dssp HHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEECC-------CCCTTCHHHHHHHH
T ss_pred HhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccccc-------ccCCCCHHHHHHHH
Confidence 9874 69999999999998763 477889999999999999876421 11111111 12467
Q ss_pred HHHHHcCCceeee
Q 010627 314 ANAVLDGTDCVML 326 (505)
Q Consensus 314 ~nav~~G~D~imL 326 (505)
..+...|+||-+.
T Consensus 246 ~~ar~lGF~GK~~ 258 (433)
T 3oyz_A 246 TDNQAKGMLGIWS 258 (433)
T ss_dssp HHHHTTTCCEEEE
T ss_pred HHHHhCCCCceEe
Confidence 7788999999776
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.40 E-value=3.7e-07 Score=103.89 Aligned_cols=136 Identities=19% Similarity=0.136 Sum_probs=102.8
Q ss_pred CCCChhcHHHHHhccc---ccCCC---EEEEcCCCChhHHHHHHHHHhc--------cC--CCceEEEEecCHHHHhcHH
Q 010627 183 PTLTEKDKEDILKWGI---PNQID---MIALSFVRKGSDLVGVRKLLGG--------HA--KNILLMSKVENQEGVANFD 246 (505)
Q Consensus 183 ~~lte~D~~di~~~al---~~g~d---~V~~sfV~sa~dv~~v~~~l~~--------~~--~~~~IiakIEt~~av~nld 246 (505)
|.+.+-..+.|.+.+. +.|.+ .|++|||+++++++.+++++.. .| .++.+.++||+|.|+.+++
T Consensus 680 peif~~QlrAi~~Aa~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~ad 759 (876)
T 1vbg_A 680 PELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVAD 759 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHH
Confidence 4555555566622222 23765 6999999999999999987642 23 3588999999999999999
Q ss_pred HHHhcCCeeEEecCccc-CcCCc----------------------------hhHHHHHHHHHHHHHHc--CCCeEEehhh
Q 010627 247 DILANSDAFMVARGDLG-MEIPI----------------------------EKIFLAQKVMIYKCNIQ--GKPVVTATQM 295 (505)
Q Consensus 247 eI~~~sDgImIaRgDLg-~e~~~----------------------------~~v~~~qk~Ii~~~~~~--gkpvi~ATqm 295 (505)
+|++..|++.||..||. ..++. +.|..+.++++++|+++ |+|+.++.|+
T Consensus 760 eIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~ 839 (876)
T 1vbg_A 760 EIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEH 839 (876)
T ss_dssp HHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGG
T ss_pred HHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCc
Confidence 99999999999999998 33332 35677889999999998 9999998884
Q ss_pred hHhhhcCCCCChHHHHHHHHHHHcCCceeeeccc
Q 010627 296 LESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 329 (505)
Q Consensus 296 LeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~E 329 (505)
=- .| .-+...+..|.|-+-+|..
T Consensus 840 ~g------dP-----~~~~~l~~~Gl~~vS~sp~ 862 (876)
T 1vbg_A 840 GG------EP-----SSVAFFAKAGLDYVSCSPF 862 (876)
T ss_dssp GG------SH-----HHHHHHHHTTCSEEEECGG
T ss_pred CC------CH-----HHHHHHHHcCCCEEEECcc
Confidence 31 23 2235678899999988743
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.28 E-value=1e-06 Score=100.28 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=102.6
Q ss_pred CCCChhcHHHHHhccccc-----CCC---EEEEcCCCChhHHHHHHHHHhc--------cC--CCceEEEEecCHHHHhc
Q 010627 183 PTLTEKDKEDILKWGIPN-----QID---MIALSFVRKGSDLVGVRKLLGG--------HA--KNILLMSKVENQEGVAN 244 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~-----g~d---~V~~sfV~sa~dv~~v~~~l~~--------~~--~~~~IiakIEt~~av~n 244 (505)
|.+.+-..+.| ..|... |.+ .|++|||+++++++.+++++.+ .| .++.+.++||+|.|+.+
T Consensus 673 peif~~QlrAi-~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ 751 (873)
T 1kbl_A 673 PEIAKMQTRAV-MEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALT 751 (873)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHT
T ss_pred hHHHHHHHHHH-HHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHH
Confidence 45555555666 322222 754 7999999999999999987742 23 35889999999999999
Q ss_pred HHHHHhcCCeeEEecCccc-CcCCc----------------------------hhHHHHHHHHHHHHHHc--CCCeEEeh
Q 010627 245 FDDILANSDAFMVARGDLG-MEIPI----------------------------EKIFLAQKVMIYKCNIQ--GKPVVTAT 293 (505)
Q Consensus 245 ldeI~~~sDgImIaRgDLg-~e~~~----------------------------~~v~~~qk~Ii~~~~~~--gkpvi~AT 293 (505)
+++|++..|++.||..||. ..++. +.|..+.+.++++|+++ |+||.++.
T Consensus 752 ad~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCG 831 (873)
T 1kbl_A 752 ADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICG 831 (873)
T ss_dssp HHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECC
Confidence 9999999999999999998 44442 34667788999999997 99999988
Q ss_pred hhhHhhhcCCCCChHHHHHHHHHHHcCCceeeeccc
Q 010627 294 QMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 329 (505)
Q Consensus 294 qmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~E 329 (505)
|+=- .| .-+...+..|.|-+-.|..
T Consensus 832 e~~g------dP-----~~~~~l~~~Gl~~vS~sp~ 856 (873)
T 1kbl_A 832 EHGG------DP-----SSVEFCHKVGLNYVSCSPF 856 (873)
T ss_dssp GGGG------SH-----HHHHHHHHTTCSEEEECGG
T ss_pred CCCC------CH-----HHHHHHHHcCCCEEEEChh
Confidence 8431 23 2235678899999988743
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.85 E-value=5.9e-05 Score=81.23 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=86.6
Q ss_pred CCEEEEcCCCChhHHHHHHHHHhc----cC---CCceEEEEecCHHHHhcHHHHHhc-C---CeeEEecCcccCcCCch-
Q 010627 202 IDMIALSFVRKGSDLVGVRKLLGG----HA---KNILLMSKVENQEGVANFDDILAN-S---DAFMVARGDLGMEIPIE- 269 (505)
Q Consensus 202 ~d~V~~sfV~sa~dv~~v~~~l~~----~~---~~~~IiakIEt~~av~nldeI~~~-s---DgImIaRgDLg~e~~~~- 269 (505)
.++|.+|++++++|+..+.+.+.. .| ..+++++.|||+.|+-|++||+.. + .|+..|+.|+..++ +.
T Consensus 207 g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~-i~~ 285 (532)
T 3cuz_A 207 GPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSY-IKT 285 (532)
T ss_dssp CCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHH-HHH
T ss_pred CCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHH-Hhh
Confidence 499999999999999999887741 12 247899999999999999999975 4 48999999998776 21
Q ss_pred -------------------hHHHHHHHHH-HHHHHcCCCeEE--ehhhhHhhhcCCCCChH----HHHHHHHHHHcCCce
Q 010627 270 -------------------KIFLAQKVMI-YKCNIQGKPVVT--ATQMLESMIKSPRPTRA----EATDVANAVLDGTDC 323 (505)
Q Consensus 270 -------------------~v~~~qk~Ii-~~~~~~gkpvi~--ATqmLeSM~~~~~ptra----Ev~Dv~nav~~G~D~ 323 (505)
.+..+..+++ .+|+++|++.|- +- ++.. +.+.-..+ =..|...+..+|+||
T Consensus 286 ~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a-~~p~--kD~e~~~~~~~~l~~dk~~~~~~GfdG 362 (532)
T 3cuz_A 286 LKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAA-FIPS--KDEEHNNQVLNKVKADKSLEANNGHDG 362 (532)
T ss_dssp TTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEC-BCCC--SSGGGCHHHHHHHHHHHHHHHHHTCSE
T ss_pred cccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccc-cCCC--CChhHHHHHHHHHHHHHHHHHHCCCCc
Confidence 1445555555 999999998875 21 1110 00000000 125666788899999
Q ss_pred eee
Q 010627 324 VML 326 (505)
Q Consensus 324 imL 326 (505)
-+.
T Consensus 363 kwv 365 (532)
T 3cuz_A 363 TWI 365 (532)
T ss_dssp EEE
T ss_pred ccc
Confidence 888
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.72 E-value=8.3e-05 Score=79.99 Aligned_cols=121 Identities=15% Similarity=0.112 Sum_probs=88.4
Q ss_pred ccCCCEEEEcCCCChhHHHHHHHHHhcc----C---CCceEEEEecCHHHHhcHHHHHhc-C---CeeEEecCcccCcCC
Q 010627 199 PNQIDMIALSFVRKGSDLVGVRKLLGGH----A---KNILLMSKVENQEGVANFDDILAN-S---DAFMVARGDLGMEIP 267 (505)
Q Consensus 199 ~~g~d~V~~sfV~sa~dv~~v~~~l~~~----~---~~~~IiakIEt~~av~nldeI~~~-s---DgImIaRgDLg~e~~ 267 (505)
..|+ +|.+|++++++|+..+.+.+... | ..+++.+.|||+.|+-|++||+.. + .|+..||.|+..++.
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 3576 99999999999999998877421 2 258999999999999999999965 3 499999999987763
Q ss_pred c--------------------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCCh-----------HHHHHHHHH
Q 010627 268 I--------------------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTR-----------AEATDVANA 316 (505)
Q Consensus 268 ~--------------------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptr-----------aEv~Dv~na 316 (505)
. +-+...++.++.+|+++|++.|.. |- .+ .|.+ .=..|-...
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~-a~----ip~~~D~~~n~~~~~~~~~dk~~~ 353 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MA-AQ----IPIKNNPEANEAAFEKVRADKERE 353 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC--------------------------CHHHHHHHHH
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--cc-cc----CcCcCChHHHHHHHHHHHHHHHHH
Confidence 1 124455677889999999998752 11 11 2332 122566778
Q ss_pred HHcCCceeeec
Q 010627 317 VLDGTDCVMLS 327 (505)
Q Consensus 317 v~~G~D~imLs 327 (505)
..+|+||-++-
T Consensus 354 ~~~GfdGkwvi 364 (528)
T 3cux_A 354 ALDGHDGTWVA 364 (528)
T ss_dssp HHHTCSBEEES
T ss_pred HhCCCCccccc
Confidence 89999999883
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.66 E-value=7e-05 Score=82.25 Aligned_cols=131 Identities=12% Similarity=0.059 Sum_probs=91.8
Q ss_pred HHHHHhcccc--cCCCEEEEcCCCChhHHHHHHHHHhc----cC---CCceEEEEecCHHHHhcHHHHHh-cC---CeeE
Q 010627 190 KEDILKWGIP--NQIDMIALSFVRKGSDLVGVRKLLGG----HA---KNILLMSKVENQEGVANFDDILA-NS---DAFM 256 (505)
Q Consensus 190 ~~di~~~al~--~g~d~V~~sfV~sa~dv~~v~~~l~~----~~---~~~~IiakIEt~~av~nldeI~~-~s---DgIm 256 (505)
..|+ +..+. .|.++|.+|++++++|+..+.+++.. .| ..+++.++|||+.|+-|++||+. ++ .|+.
T Consensus 372 ~hDl-~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn 450 (731)
T 1p7t_A 372 LYDL-KVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN 450 (731)
T ss_dssp HHHH-HHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEE
T ss_pred HhhH-HHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEE
Confidence 4555 44443 35899999999999999999887642 12 25889999999999999999985 43 4899
Q ss_pred EecCcccCcC-Cc----------------hhHHHHHHHHHH---HHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHH
Q 010627 257 VARGDLGMEI-PI----------------EKIFLAQKVMIY---KCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 316 (505)
Q Consensus 257 IaRgDLg~e~-~~----------------~~v~~~qk~Ii~---~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~na 316 (505)
.|+.|+..++ +. +-+...++..+. +|+++|++.|-- -|-..|.-...=..|....
T Consensus 451 ~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~p~dmeg~~~dk~~~ 525 (731)
T 1p7t_A 451 TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAMPDLMADMYSQKGDQ 525 (731)
T ss_dssp ECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCCTTCHHHHHHHTHHH
T ss_pred cCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccChhhHHHHHHHHHHH
Confidence 9999998875 22 112233455554 899999998750 1222222222223556668
Q ss_pred HHcCCceeee
Q 010627 317 VLDGTDCVML 326 (505)
Q Consensus 317 v~~G~D~imL 326 (505)
...|+||-++
T Consensus 526 ~~~GfdGkwV 535 (731)
T 1p7t_A 526 LRAGANTAWV 535 (731)
T ss_dssp HHTTCSEEEE
T ss_pred HhCCCCCccc
Confidence 8899999988
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.41 E-value=0.0007 Score=77.21 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=104.6
Q ss_pred ccCCCCChhcHHHHHhccc---ccCCC---EEEEcCCCChhHHHHHHHHHh--------ccC--CCceEEEEecCHHHHh
Q 010627 180 VDLPTLTEKDKEDILKWGI---PNQID---MIALSFVRKGSDLVGVRKLLG--------GHA--KNILLMSKVENQEGVA 243 (505)
Q Consensus 180 ~~l~~lte~D~~di~~~al---~~g~d---~V~~sfV~sa~dv~~v~~~l~--------~~~--~~~~IiakIEt~~av~ 243 (505)
+..|.+.+-..+.|.+.+. +.|.+ .|++|||++.++++.+++++. +.| .++++..|||.|.|.-
T Consensus 697 l~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal 776 (913)
T 1h6z_A 697 ITYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAV 776 (913)
T ss_dssp HHSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHH
Confidence 3456667767777733322 23654 799999999999999998763 223 3578999999999999
Q ss_pred cHHHHHhcCCeeEEecCcccCc-CCc----------------------------hhHHHHHHHHHHHHHH--cCCCeEEe
Q 010627 244 NFDDILANSDAFMVARGDLGME-IPI----------------------------EKIFLAQKVMIYKCNI--QGKPVVTA 292 (505)
Q Consensus 244 nldeI~~~sDgImIaRgDLg~e-~~~----------------------------~~v~~~qk~Ii~~~~~--~gkpvi~A 292 (505)
.+|+|++.+|++-||-.||.-= ++. +.|..+.+..+++|++ .|+||.++
T Consensus 777 ~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgIC 856 (913)
T 1h6z_A 777 TADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGIC 856 (913)
T ss_dssp THHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 9999999999999999887521 111 3566788899999997 69999999
Q ss_pred hhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeeccc
Q 010627 293 TQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 329 (505)
Q Consensus 293 TqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~E 329 (505)
.|+=- .|. -+...+..|.|-+-+|..
T Consensus 857 GE~~g------dP~-----~~~~l~~~Gid~vS~sp~ 882 (913)
T 1h6z_A 857 GEHGG------DPA-----TIGFCHKVGLDYVSCSPF 882 (913)
T ss_dssp SGGGG------CHH-----HHHHHHHHTCSEEEECGG
T ss_pred CCCCC------CHH-----HHHHHHHcCCCEEEECch
Confidence 88541 232 236678889999999843
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.37 E-value=0.019 Score=65.92 Aligned_cols=114 Identities=18% Similarity=0.116 Sum_probs=84.1
Q ss_pred EEEEcCCCChhHHHHHHHHHh--------ccC--CCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccC-----cCC-
Q 010627 204 MIALSFVRKGSDLVGVRKLLG--------GHA--KNILLMSKVENQEGVANFDDILANSDAFMVARGDLGM-----EIP- 267 (505)
Q Consensus 204 ~V~~sfV~sa~dv~~v~~~l~--------~~~--~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~-----e~~- 267 (505)
.|++|||++.++++.+++.+. +.+ .+.+|-.|||.|.+.-.+|+|++.+|++=||-.||.- +=.
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998887653 223 2578999999999999999999999999999998842 211
Q ss_pred ------------------c-----hhHHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCc
Q 010627 268 ------------------I-----EKIFLAQKVMIYKCNIQG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 322 (505)
Q Consensus 268 ------------------~-----~~v~~~qk~Ii~~~~~~g--kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D 322 (505)
+ +-|..+.+..++++++++ .||.++.|+=- .|. -+...+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~g------dP~-----~~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHGG------DPA-----TIGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGGG------CHH-----HHHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCccc------CHH-----HHHHHHHcCCC
Confidence 0 134445555566666554 58899998531 232 24678889999
Q ss_pred eeeecc
Q 010627 323 CVMLSG 328 (505)
Q Consensus 323 ~imLs~ 328 (505)
-+-+|.
T Consensus 876 ~~S~sP 881 (913)
T 2x0s_A 876 YVSCSP 881 (913)
T ss_dssp EEEECG
T ss_pred EEEECh
Confidence 999983
No 33
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=94.94 E-value=0.042 Score=58.90 Aligned_cols=91 Identities=18% Similarity=0.295 Sum_probs=76.5
Q ss_pred cCCCEEEEcCCCChhHHHHHHHHHhc--------cC-----CCceEEEEecCHHHHhcHHHHHhc--C-----------C
Q 010627 200 NQIDMIALSFVRKGSDLVGVRKLLGG--------HA-----KNILLMSKVENQEGVANFDDILAN--S-----------D 253 (505)
Q Consensus 200 ~g~d~V~~sfV~sa~dv~~v~~~l~~--------~~-----~~~~IiakIEt~~av~nldeI~~~--s-----------D 253 (505)
..+..+++||.+|++|+.++..++++ .+ ..+.|+..+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45667999999999999999877732 12 257899999999999999999974 1 2
Q ss_pred eeEEecCcccCcCCc----hhHHHHHHHHHHHHHHcCCCeE
Q 010627 254 AFMVARGDLGMEIPI----EKIFLAQKVMIYKCNIQGKPVV 290 (505)
Q Consensus 254 gImIaRgDLg~e~~~----~~v~~~qk~Ii~~~~~~gkpvi 290 (505)
-||+|+.|=+.+-|. -.+..+|.++.+.|+++|.++-
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~ 258 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTIS 258 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 799999998888886 3888999999999999999864
No 34
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.68 E-value=0.28 Score=52.84 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=83.2
Q ss_pred ChhcHHHHHhcccccCCCEEEE--cCCCChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCeeEEecCcc
Q 010627 186 TEKDKEDILKWGIPNQIDMIAL--SFVRKGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAFMVARGDL 262 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgImIaRgDL 262 (505)
++.+.+-+ ...++.|+|+|++ ++-.+... .+..+++++...++.||| -+-|.++.++|-+ +-+|++-||-|-=
T Consensus 279 ~~d~~eR~-~aLv~AGvD~iviD~ahGhs~~v-~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 279 RPGDKDRL-KLLAEAGLDVVVLDSSQGNSVYQ-IEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SHHHHHHH-HHHHHTTCCEEEECCSCCCSHHH-HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred CccHHHHH-HHHHhcCCcEEEEeccccccHHH-HHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 45566666 6778999998876 33333343 444445655566777766 7999999877643 4589999976642
Q ss_pred cCcC-------CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 263 GMEI-------PIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 263 g~e~-------~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
++-. +.+ -..+...+.++|+.+|+|+|-=.- .- --.|++.|+..|||++||.
T Consensus 355 SiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIADGG---------I~---~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 355 SICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIADGG---------IG---NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp TTBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEEESC---------CC---SHHHHHHHHHTTCSEEEES
T ss_pred cccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEecCC---------cC---cchHHHHHhhcCCCEEEEc
Confidence 2211 222 233456677888999999984221 11 2479999999999999994
No 35
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=94.03 E-value=1 Score=42.24 Aligned_cols=115 Identities=18% Similarity=0.171 Sum_probs=69.6
Q ss_pred chhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEeecccccC-CCCcCCCChhhhhccccccccEEEE
Q 010627 373 PLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTD-NFDWSCSNEAPARHSLIFRGLVPVL 451 (505)
Q Consensus 373 ~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~RP~~pIiav~~p~~~~t-~~~~~~~~~~~aR~L~L~~GV~P~l 451 (505)
-++.....|++.|.+++.+-||+.|.+|.||+.+...-.. .+++| ++..--. .-.|.. ++.+ |+..--.|+.-+-
T Consensus 35 NT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvV-Th~~GF~~pg~~e~-~~e~-~~~L~~~G~~V~t 110 (206)
T 1t57_A 35 NTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSV-THHAGFREKGQLEL-EDEA-RDALLERGVNVYA 110 (206)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEE-CCCTTSSSTTCCSS-CHHH-HHHHHHHTCEEEC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEE-eCcCCCCCCCCCcC-CHHH-HHHHHhCCCEEEE
Confidence 3677888889999999999999999999999999886655 78877 2111000 223321 2333 3333335554332
Q ss_pred eCCCCCCCCcc----------CHHHHHHHHH--------------HHHHHcCCCCCCCEEEEEeec
Q 010627 452 YAGSARASDAE----------TTEEALEFAI--------------ELGKKKGLCKKGDSVVALHRV 493 (505)
Q Consensus 452 ~~~~~~~~~~~----------~~e~~i~~al--------------~~~~~~g~~~~GD~VVvv~g~ 493 (505)
..... ...+ ..-+.+..++ -+|.+.|++..|+.|+-+.|.
T Consensus 111 ~tH~l--sG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 111 GSHAL--SGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp CSCTT--TTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred eeccc--cchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 22110 0000 1222232222 236799999999999999887
No 36
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=93.97 E-value=0.14 Score=58.79 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=82.8
Q ss_pred hcccccC---CCEEEEcCCCChhHHHHHHHHHhccC--CCceEEEEecCHHHHhcHHHHHhc--C-----------CeeE
Q 010627 195 KWGIPNQ---IDMIALSFVRKGSDLVGVRKLLGGHA--KNILLMSKVENQEGVANFDDILAN--S-----------DAFM 256 (505)
Q Consensus 195 ~~al~~g---~d~V~~sfV~sa~dv~~v~~~l~~~~--~~~~IiakIEt~~av~nldeI~~~--s-----------DgIm 256 (505)
+.+.+.| +..+++|+.++++||.++--+.++.| ..+.|+...||.+.++|..+|++. + --||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 4445555 44678999999999999999988887 358899999999999999999985 1 1699
Q ss_pred EecCcccCcCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 010627 257 VARGDLGMEIPI----EKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 257 IaRgDLg~e~~~----~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
+|..|=+-+-|. -.+..+|.++.+.|+++|.++.+
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~l 637 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTL 637 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 999999999887 38889999999999999999854
No 37
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=93.97 E-value=1.3 Score=41.46 Aligned_cols=117 Identities=18% Similarity=0.100 Sum_probs=73.7
Q ss_pred chhhHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEeecccccC-CCCcCCCChhhhhccccccccEEEE
Q 010627 373 PLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTD-NFDWSCSNEAPARHSLIFRGLVPVL 451 (505)
Q Consensus 373 ~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~RP~~pIiav~~p~~~~t-~~~~~~~~~~~aR~L~L~~GV~P~l 451 (505)
-++.....|++.|.+++.+-||+.|.||.||+.+...-....+++| ++..--. .-.|.. ++.+ |+..--.|+.-+-
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvV-Th~~GF~~pg~~e~-~~e~-~~~L~~~G~~V~t 103 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVV-TYHTGFVREGENTM-PPEV-EEELRKRGAKIVR 103 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEE-ECCTTSSSTTCCSS-CHHH-HHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEE-eCcCCCCCCCCCcC-CHHH-HHHHHhCCCEEEE
Confidence 3677888889999999999999999999999999887777788888 2111100 223321 2333 3333345654333
Q ss_pred eCCCCCC-------CCc-cCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEeec
Q 010627 452 YAGSARA-------SDA-ETTEEALEFAIE---------------LGKKKGLCKKGDSVVALHRV 493 (505)
Q Consensus 452 ~~~~~~~-------~~~-~~~e~~i~~al~---------------~~~~~g~~~~GD~VVvv~g~ 493 (505)
.....-. .|- -..-+.+..+++ .|.+.|++.. +.|+-+.|.
T Consensus 104 ~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 104 QSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp CCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred EeccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 2221000 000 123445555555 4779999999 889989887
No 38
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.94 E-value=0.13 Score=48.00 Aligned_cols=133 Identities=15% Similarity=0.145 Sum_probs=82.5
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEE---ecCHHHHhcHHHHHhc-CCeeEEecCcccCcCCchh
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSK---VENQEGVANFDDILAN-SDAFMVARGDLGMEIPIEK 270 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak---IEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~ 270 (505)
+.+.+.|+|+|.++-....+++.++.+.+++.|. .++.- .++ ..+.+..+.+. +|.|.+.+|-=|...+...
T Consensus 71 ~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 71 QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGK--QVVVDMICVDD--LPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTC--EEEEECTTCSS--HHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCC--eEEEEecCCCC--HHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 6778899999999876655778888888877654 33332 233 24556777766 7998887652222222111
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 271 IFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 271 v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
+ ..+-+..... +.|+++..-+ .| .++..+...|+|++....--..+..|.++++.+.+.++
T Consensus 147 ~----~~i~~l~~~~~~~~i~~~gGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 147 I----DDLITMLKVRRKARIAVAGGI--------SS-----QTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp H----HHHHHHHHHCSSCEEEEESSC--------CT-----TTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred H----HHHHHHHHHcCCCcEEEECCC--------CH-----HHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 1 1111122222 5777654322 12 25567778899999997554456789998888876554
No 39
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.52 E-value=1.2 Score=43.98 Aligned_cols=155 Identities=14% Similarity=0.069 Sum_probs=98.1
Q ss_pred CChhcHHHHHhcccccCCCEEEEcCCCChh------HHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEE
Q 010627 185 LTEKDKEDILKWGIPNQIDMIALSFVRKGS------DLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMV 257 (505)
Q Consensus 185 lte~D~~di~~~al~~g~d~V~~sfV~sa~------dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImI 257 (505)
++..++..|.+...+.|++.|-+.+-.+++ +..++-+.+.+. .++++.+.+-+.+++ +..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n~~~i---~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPNMKGY---EAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSSHHHH---HHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCCHHHH---HHHHHCCCCEEEE
Confidence 677777777678888999999885433333 444444445443 466776766443333 333333 577877
Q ss_pred ecCcccC---------cCCchhHHHHHHHHHHHHHHcCCCeE--EehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceee
Q 010627 258 ARGDLGM---------EIPIEKIFLAQKVMIYKCNIQGKPVV--TATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVM 325 (505)
Q Consensus 258 aRgDLg~---------e~~~~~v~~~qk~Ii~~~~~~gkpvi--~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~im 325 (505)
. ++. ..+.++.....+++++.|+++|++|- +.+-. +.....+-+..++.+++. +...|+|.+.
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3 222 35677777888899999999999985 32210 000112334566666665 5578999999
Q ss_pred ecccCCCCCCHHHHHHHHHHHHHH
Q 010627 326 LSGETAAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 326 Ls~Eta~G~yP~~~V~~m~~i~~~ 349 (505)
|. +|.=...|.+.-+.+..+.+.
T Consensus 174 l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 174 LG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred ec-CCCCCcCHHHHHHHHHHHHHh
Confidence 97 454446798888888777643
No 40
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.38 E-value=1.1 Score=45.98 Aligned_cols=122 Identities=20% Similarity=0.289 Sum_probs=76.1
Q ss_pred hcHHHHHhcccccCCCEEEE--cCCCChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCeeEEecCcccC
Q 010627 188 KDKEDILKWGIPNQIDMIAL--SFVRKGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAFMVARGDLGM 264 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgImIaRgDLg~ 264 (505)
.+.+.+ +.+++.|+|+|.+ ++-.+...+..++.+- +...++.+++ .+-|++....+.+ .-+|+|.++-|. |.
T Consensus 108 ~~~~~~-~~lieaGvd~I~idta~G~~~~~~~~I~~ik-~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gp-Gs 182 (366)
T 4fo4_A 108 GNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGP-GS 182 (366)
T ss_dssp TCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSC-ST
T ss_pred hHHHHH-HHHHhCCCCEEEEeCCCCCCHHHHHHHHHHH-HhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCC-CC
Confidence 345566 7788999999987 5555554444444433 3334567766 5888776655443 248999995221 11
Q ss_pred c--------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 265 E--------IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 265 e--------~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
. .+.+. ..+...+.+.|+..++|+|.+.-+- ...|++.++..|+|++|+.
T Consensus 183 ~~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 183 ICTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp TBCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CCCcccccCcccch-HHHHHHHHHHHhhcCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 11122 2334456666777899999655432 2357899999999999994
No 41
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.01 E-value=1.7 Score=43.95 Aligned_cols=160 Identities=13% Similarity=0.114 Sum_probs=103.1
Q ss_pred CCChhcHHHHHh-cccccCCCEEEE-cCCCChhHHHHHHHHHhc-----cCCCceEEEEecCHHHHhcHHHHHhc-CCee
Q 010627 184 TLTEKDKEDILK-WGIPNQIDMIAL-SFVRKGSDLVGVRKLLGG-----HAKNILLMSKVENQEGVANFDDILAN-SDAF 255 (505)
Q Consensus 184 ~lte~D~~di~~-~al~~g~d~V~~-sfV~sa~dv~~v~~~l~~-----~~~~~~IiakIEt~~av~nldeI~~~-sDgI 255 (505)
.++..|+..|.+ ...+.|++.|=+ +|+.++++.+.++++... .-+++.+.+..=+.. .++..++. .|.|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 467777777756 666689999888 677788776666665431 223466777665554 34444443 4644
Q ss_pred --EEecCccc----CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 256 --MVARGDLG----MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 256 --mIaRgDLg----~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
+++-.|+- .....++.....+.+++.|+++|+.|.+.... +-..++-+...+.+++. +...|+|.|.| .
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l-~ 189 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFL-P 189 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEE-E
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEE-e
Confidence 44434431 12345566677788999999999998764321 10112223455566666 55669999999 5
Q ss_pred cCCCCCCHHHHHHHHHHHHHHH
Q 010627 329 ETAAGAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~a 350 (505)
+|.=.-.|.++-+.+..+.++.
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHHHHHhc
Confidence 8877788999988888876654
No 42
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.99 E-value=0.59 Score=48.63 Aligned_cols=119 Identities=17% Similarity=0.235 Sum_probs=72.0
Q ss_pred HHHHhcccccCCCEEEE--cCCCChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCeeEEec--CcccC-
Q 010627 191 EDILKWGIPNQIDMIAL--SFVRKGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAFMVAR--GDLGM- 264 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgImIaR--gDLg~- 264 (505)
+.+ +.+++.|+|+|.+ ++-.+....+.++. +.+.- .++|++ .+-|.+....+.+ .-+|+|.++- |..+.
T Consensus 147 e~~-~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~-~i~Vi~g~V~t~e~A~~a~~--aGAD~I~vG~g~Gs~~~t 221 (400)
T 3ffs_A 147 ERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM-NIDVIVGNVVTEEATKELIE--NGADGIKVGIGPGSICTT 221 (400)
T ss_dssp HHH-HHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC-CCEEEEEEECSHHHHHHHHH--TTCSEEEECC--------
T ss_pred HHH-HHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC-CCeEEEeecCCHHHHHHHHH--cCCCEEEEeCCCCcCccc
Confidence 445 7778999999987 66555433444443 33221 567886 5766665544332 2379999953 22110
Q ss_pred ----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 265 ----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 265 ----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
..+.. -..+...+.+.+++.+.|+|-+.-+- ...|++.++..|+|++|+.
T Consensus 222 r~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~------------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 222 RIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp -CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHTTTCSEEEEC
T ss_pred ccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 01111 22344566666777799999765543 2468899999999999983
No 43
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.78 E-value=1 Score=46.21 Aligned_cols=120 Identities=17% Similarity=0.232 Sum_probs=71.0
Q ss_pred HHHHHhcccccCCCEEEE--cCCCChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCeeEEe--cCcccC
Q 010627 190 KEDILKWGIPNQIDMIAL--SFVRKGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAFMVA--RGDLGM 264 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgImIa--RgDLg~ 264 (505)
.+.+ +.+++.|+|+|.+ ++-.+...++.++++-... ++.+++ .+-|++..+.+.+ .-+|+|.++ +|....
T Consensus 107 ~e~a-~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l~~--aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIE--NGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTTCC
T ss_pred HHHH-HHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHHHH--cCcCEEEEecCCCcCCC
Confidence 4455 6678899999987 4433332233333322222 467775 7777766544432 237999995 332110
Q ss_pred -----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 265 -----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 265 -----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
..+.+. ......+.+.++..+.|+|.+.-+- ...|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCCC------------SHHHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 011112 2344556666777899998654432 2367888999999999984
No 44
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.59 E-value=0.86 Score=48.64 Aligned_cols=124 Identities=19% Similarity=0.243 Sum_probs=76.2
Q ss_pred hhcHHHHHhcccccCCCEEEEcCCC--ChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFVR--KGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV~--sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
+.+.+.+ +..++.|+|.|.+-... +...+..+++ +.+...++.|++ .+-+.+..+.+.+ .-+|+|.++-|.=+
T Consensus 230 ~d~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 230 PGNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGS 305 (496)
T ss_dssp SCCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCCEEEEEECSHHHHHHHHH--HTCSEEEECSSCCT
T ss_pred cchHHHH-HHHHhccCceEEeccccccchHHHHHHHH-HHHHCCCceEEEcccCcHHHHHHHHH--hCCCEEEECCCCCc
Confidence 4456666 77788999999885432 2322233333 322223566666 4777776644432 23799998633222
Q ss_pred CcC-------CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 264 MEI-------PIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 264 ~e~-------~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
... +. .-..+-..+.++|++.++|+|.+.-+- -..|++.++..|+|++|+.
T Consensus 306 ~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 306 ICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp TBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CcccccccCCCc-cHHHHHHHHHHHhccCCCeEEEeCCCC------------CHHHHHHHHHcCCCeEEec
Confidence 111 11 123444677788888899999765432 2468889999999999994
No 45
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.48 E-value=0.96 Score=48.46 Aligned_cols=125 Identities=16% Similarity=0.218 Sum_probs=76.2
Q ss_pred hhcHHHHHhcccccCCCEEEEcCCC-ChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCeeEEecCcccC
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFVR-KGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAFMVARGDLGM 264 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV~-sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgImIaRgDLg~ 264 (505)
+.+.+.+ +..++.|+|.|.+.... ..+.+.+.-+.+.+...++.+++ -+-+.+....+.+ .-+|+|.+|-|-=+.
T Consensus 255 ~d~~era-~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi 331 (511)
T 3usb_A 255 ADAMTRI-DALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSI 331 (511)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred cchHHHH-HHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCccc
Confidence 3445566 77789999999885432 22333333333333333456665 6777666544333 237999985443111
Q ss_pred c-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 265 E-------IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 265 e-------~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
. .+.+. ..+...+.++|++.+.|+|.+.-+- -..|++.|+..|+|++|+.
T Consensus 332 ~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 332 CTTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheec
Confidence 1 11112 2344567778888899999765433 3478899999999999994
No 46
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.33 E-value=0.78 Score=48.90 Aligned_cols=124 Identities=16% Similarity=0.240 Sum_probs=74.9
Q ss_pred hhcHHHHHhcccccCCCEEEEc--CCCChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 187 EKDKEDILKWGIPNQIDMIALS--FVRKGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~s--fV~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
+.+.+.+ +..++.|+|+|.+- +-.+....+.++. +.+...++.|++. +-+.+....+.+ .-+|+|.++-|.=+
T Consensus 228 ~~~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERV-AALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTFPDVQVIGGNIATAEAAKALAE--AGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHCTTSEEEEEEECSHHHHHHHHH--TTCSEEEECSSCST
T ss_pred cchHHHH-HHHhhcccceEEecccCCcchhHHHHHHH-HHHHCCCceEEEeeeCcHHHHHHHHH--cCCCEEEECCCCCc
Confidence 4456666 77788999999863 3233322223332 3222235677776 777766544332 23799999533211
Q ss_pred C-------cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 264 M-------EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 264 ~-------e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
. ..+.+ -..+-..+.+++++.++|+|.+.-+- -..|+..++..|+|++|+.
T Consensus 304 ~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADGGIR------------FSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeCCCC------------CHHHHHHHHHcCCCeeeec
Confidence 1 11111 22344667777777899999765433 2467888999999999994
No 47
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.23 E-value=0.25 Score=56.32 Aligned_cols=92 Identities=18% Similarity=0.295 Sum_probs=79.9
Q ss_pred cCCCEEEEcCCCChhHHHHHHHHHhccCC--CceEEEEecCHHHHhcHHHHHhcC-------------CeeEEecCcccC
Q 010627 200 NQIDMIALSFVRKGSDLVGVRKLLGGHAK--NILLMSKVENQEGVANFDDILANS-------------DAFMVARGDLGM 264 (505)
Q Consensus 200 ~g~d~V~~sfV~sa~dv~~v~~~l~~~~~--~~~IiakIEt~~av~nldeI~~~s-------------DgImIaRgDLg~ 264 (505)
..+..+++|+.++++||.++--+.++.|- .+.|+...||.+.++|..+|++.. --||+|..|=+-
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 34667889999999999999999888874 588999999999999999999741 169999998888
Q ss_pred cCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 010627 265 EIPI----EKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 265 e~~~----~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
+-|. -.+..+|.++.+.|+++|.++.+
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~l 577 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTL 577 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 8886 38889999999999999999854
No 48
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=92.20 E-value=0.93 Score=44.43 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=99.8
Q ss_pred CCCCChhcHHHHHhccccc--CCCEEEEcCCCChhHHHHHHHHHhccCC-CceEEEEecCHHHHhcHHHH--------Hh
Q 010627 182 LPTLTEKDKEDILKWGIPN--QIDMIALSFVRKGSDLVGVRKLLGGHAK-NILLMSKVENQEGVANFDDI--------LA 250 (505)
Q Consensus 182 l~~lte~D~~di~~~al~~--g~d~V~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakIEt~~av~nldeI--------~~ 250 (505)
-|..|+.|.+.+.+.+.+. |++.|+++ +..+..+++.|...+. .+++.+-|=-|.|-.+.+.. ..
T Consensus 22 ~p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 97 (260)
T 1p1x_A 22 NDDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAY 97 (260)
T ss_dssp CTTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHc
Confidence 3566888888887888888 89999876 7788888888863344 68888888555544333322 22
Q ss_pred cCCeeEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHH-HHHHH-HHHHcCCcee
Q 010627 251 NSDAFMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPV--VTATQMLESMIKSPRPTRAE-ATDVA-NAVLDGTDCV 324 (505)
Q Consensus 251 ~sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpv--i~ATqmLeSM~~~~~ptraE-v~Dv~-nav~~G~D~i 324 (505)
-+|.|=+ ..|-| .+=..+.+..-.+.+.++|..+|+|+ |+.|-.| +..| +.... -++..|+|.|
T Consensus 98 GAdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfV 167 (260)
T 1p1x_A 98 GADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFI 167 (260)
T ss_dssp TCSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 2454422 22222 11113466667778888998888884 8888777 4456 33333 3778999997
Q ss_pred eecccCCCCCC----HHHHHHHHHHHHHHH
Q 010627 325 MLSGETAAGAY----PEVAVRTMAQICVEA 350 (505)
Q Consensus 325 mLs~Eta~G~y----P~~~V~~m~~i~~~a 350 (505)
=-| .|.. -.+.|+.|++.+++.
T Consensus 168 KTS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 168 KTS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp ECC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred EeC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 654 4554 469999999988753
No 49
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.12 E-value=0.81 Score=46.02 Aligned_cols=107 Identities=12% Similarity=0.186 Sum_probs=67.0
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEE-ecCcccCcCC-chhH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMV-ARGDLGMEIP-IEKI 271 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImI-aRgDLg~e~~-~~~v 271 (505)
+.+.+.|+|+|.+++-...+.++.+++ . .++++.++.+.+-... +.+. +|+|.+ ++ +-|-..+ ...+
T Consensus 82 ~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g~~~~~ 151 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIGKLTTM 151 (332)
T ss_dssp HHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECCSSCHH
T ss_pred HHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCCCccHH
Confidence 677889999999988655555555553 2 4789999988765443 3333 799999 43 2222222 1111
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 272 FLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 272 ~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
..-+++ ....+.|++.+.-+- .-.|+..++..|+|++++.
T Consensus 152 -~ll~~i---~~~~~iPViaaGGI~------------~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 152 -TLVRQV---ATAISIPVIAAGGIA------------DGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp -HHHHHH---HHHCSSCEEEESSCC------------SHHHHHHHHHTTCSEEEEC
T ss_pred -HHHHHH---HHhcCCCEEEECCCC------------CHHHHHHHHHcCCCEEEec
Confidence 112222 234589999876533 1246777888999999984
No 50
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=91.64 E-value=3.2 Score=41.11 Aligned_cols=159 Identities=14% Similarity=0.062 Sum_probs=99.6
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC-CCCh-----hHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh-cCCeeE
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF-VRKG-----SDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA-NSDAFM 256 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf-V~sa-----~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-~sDgIm 256 (505)
.++..++..|.+...+.|++.|-+.| +... .|..++.+.+.+. .++.+.+.+.+.+.++. -++ -.|.|+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~~---a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALAPNLKGFEA---ALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTSEEEEECCSHHHHHH---HHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc-CCCEEEEEeCCHHHHHH---HHhCCcCEEE
Confidence 45777888876777789999988754 3221 3555554445432 56677776655444433 232 258777
Q ss_pred E-e-cCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeEE--ehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeec
Q 010627 257 V-A-RGDL----GMEIPIEKIFLAQKVMIYKCNIQGKPVVT--ATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLS 327 (505)
Q Consensus 257 I-a-RgDL----g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~--ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs 327 (505)
| . -.|+ -...+.++.....+++++.|+++|+.|-. .+- + +-....+-+..++.+++. +...|+|.+.|.
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~-~-~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCV-L-GCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECT-T-CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE-e-eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 6 2 2242 12256778888889999999999999831 110 0 000011334556666665 457899999997
Q ss_pred ccCCCCCCHHHHHHHHHHHHHH
Q 010627 328 GETAAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 328 ~Eta~G~yP~~~V~~m~~i~~~ 349 (505)
+|.=...|.+.-+.+..+.+.
T Consensus 180 -DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 180 -DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp -ESSSCCCHHHHHHHHHHHTTT
T ss_pred -CCCCCcCHHHHHHHHHHHHHh
Confidence 666556798888888777543
No 51
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.52 E-value=4.1 Score=40.60 Aligned_cols=162 Identities=12% Similarity=0.083 Sum_probs=100.9
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC-CCC-----hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEE
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF-VRK-----GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMV 257 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf-V~s-----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImI 257 (505)
.++..|+..|.+...+.|++.|=+.| +.+ ..|..++.+.+.+. .++.+.+.+.+..+++..-+ .-.|.|.|
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~~a~~--~g~~~v~i 100 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRGLENALE--GGINEACV 100 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHHHHHHHH--HTCSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHhHHHHHh--CCcCEEEE
Confidence 45778888876777779999988753 332 13555555555543 56677676666555443322 12565444
Q ss_pred --ecCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccC
Q 010627 258 --ARGDL----GMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGET 330 (505)
Q Consensus 258 --aRgDL----g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Et 330 (505)
+-.|+ -.....++.....+.+++.++++|+.|-..=-+-=+.....+-+...+.+++. +...|+|.|.|. +|
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT 179 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG-DT 179 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-CS
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc-CC
Confidence 44443 22344567777778999999999999842100000000111335566677665 467899999995 88
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 010627 331 AAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 331 a~G~yP~~~V~~m~~i~~~ 349 (505)
.=.-.|-++-+.+..+.+.
T Consensus 180 ~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 180 IGAANPAQVETVLEALLAR 198 (307)
T ss_dssp SCCCCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHh
Confidence 7778899988888777643
No 52
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.25 E-value=2.8 Score=40.78 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=50.8
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCC-CceEEEEec--C-HHHHhcHHHHHhc-CCeeEEecCcccCcC
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAK-NILLMSKVE--N-QEGVANFDDILAN-SDAFMVARGDLGMEI 266 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakIE--t-~~av~nldeI~~~-sDgImIaRgDLg~e~ 266 (505)
+.+.+.|+|||-+||-.+.++++++++.. +. .+..+.-|- + .++++++.+.++. +||+.++|.=+..+-
T Consensus 166 ~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~d 239 (263)
T 1w8s_A 166 RIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRD 239 (263)
T ss_dssp HHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTT
T ss_pred HHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcC
Confidence 56788999999999966788888888765 22 355555453 3 5677788888875 699999997665543
No 53
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=90.93 E-value=0.64 Score=44.49 Aligned_cols=135 Identities=12% Similarity=0.102 Sum_probs=80.7
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCc--ccCc-CCchhH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGD--LGME-IPIEKI 271 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgD--Lg~e-~~~~~v 271 (505)
+.+.+.|+|+|.+.. +..+++.+..+.+++.|.+..+.-.-.| .++.+++++...|.|++-.-+ ++-+ +..+.+
T Consensus 81 ~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l 157 (228)
T 3ovp_A 81 KPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMM 157 (228)
T ss_dssp HHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGH
T ss_pred HHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEEeeecCCCCCcccCHHHH
Confidence 455778999999975 5555677777777777765555433344 467888999889988873222 2221 211222
Q ss_pred HHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHH
Q 010627 272 FLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 272 ~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~ 349 (505)
.. | +..++. +.|+.+..-+ .|.. +..++..|+|.+....--.-...|.++++.+++.+.+
T Consensus 158 ~k----i-~~lr~~~~~~~I~VdGGI--------~~~t-----~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~ 219 (228)
T 3ovp_A 158 PK----V-HWLRTQFPSLDIEVDGGV--------GPDT-----VHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219 (228)
T ss_dssp HH----H-HHHHHHCTTCEEEEESSC--------STTT-----HHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred HH----H-HHHHHhcCCCCEEEeCCc--------CHHH-----HHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 22 1 122222 3455443322 2322 3667778999999864333346799999988876654
Q ss_pred H
Q 010627 350 A 350 (505)
Q Consensus 350 a 350 (505)
+
T Consensus 220 ~ 220 (228)
T 3ovp_A 220 A 220 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 54
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.82 E-value=2.4 Score=45.20 Aligned_cols=120 Identities=18% Similarity=0.161 Sum_probs=74.5
Q ss_pred cHHHHHhcccccCCCEEEE--cCCCCh---hHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcCCeeEEec--C
Q 010627 189 DKEDILKWGIPNQIDMIAL--SFVRKG---SDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANSDAFMVAR--G 260 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~--sfV~sa---~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~sDgImIaR--g 260 (505)
..+.+ +.+++.|+|+|.+ ++-... +.++++++.+ .++.|+++ +.+.+....+.+ .-+|+|.++. |
T Consensus 256 ~~~~a-~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~~--aGad~I~vg~~~G 328 (514)
T 1jcn_A 256 DKYRL-DLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLID--AGVDGLRVGMGCG 328 (514)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred hHHHH-HHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHHH--cCCCEEEECCCCC
Confidence 45566 7788999999998 432222 3344444433 35788875 887776554443 2379999954 3
Q ss_pred cccCc-----CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 261 DLGME-----IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 261 DLg~e-----~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
--... .+.+ .+.....+.+.+...+.|+|.+.-+- ...|+..++..|+|++++..
T Consensus 329 ~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 329 SICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred cccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeECH
Confidence 11000 1111 23344555666677799999755432 34688999999999999954
No 55
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.62 E-value=1.8 Score=43.47 Aligned_cols=112 Identities=14% Similarity=0.205 Sum_probs=68.4
Q ss_pred HHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCC-ch
Q 010627 191 EDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIP-IE 269 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~-~~ 269 (505)
+.+ +.+++.|+|+|.+++=...+.++.+++ . .++++.++-+.+-...+.+ .-+|+|.+--.+.|-..+ ..
T Consensus 93 ~~~-~~~~~~g~d~V~l~~g~p~~~~~~l~~----~--g~~v~~~v~s~~~a~~a~~--~GaD~i~v~g~~~GG~~G~~~ 163 (326)
T 3bo9_A 93 DLV-KVCIEEKVPVVTFGAGNPTKYIRELKE----N--GTKVIPVVASDSLARMVER--AGADAVIAEGMESGGHIGEVT 163 (326)
T ss_dssp HHH-HHHHHTTCSEEEEESSCCHHHHHHHHH----T--TCEEEEEESSHHHHHHHHH--TTCSCEEEECTTSSEECCSSC
T ss_pred HHH-HHHHHCCCCEEEECCCCcHHHHHHHHH----c--CCcEEEEcCCHHHHHHHHH--cCCCEEEEECCCCCccCCCcc
Confidence 344 667889999999988766555554443 2 4788999887665544322 237999993222222222 11
Q ss_pred hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 270 KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 270 ~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.+..+ ++ .....+.|++.+.-+- ...|+..++..|+|++++.
T Consensus 164 ~~~ll-~~---i~~~~~iPviaaGGI~------------~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 164 TFVLV-NK---VSRSVNIPVIAAGGIA------------DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHH-HH---HHHHCSSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred HHHHH-HH---HHHHcCCCEEEECCCC------------CHHHHHHHHHhCCCEEEec
Confidence 22111 12 2234589999876532 2357788888999999984
No 56
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=90.51 E-value=1.1 Score=42.30 Aligned_cols=135 Identities=7% Similarity=0.037 Sum_probs=79.8
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh---cCCeeEEecCcc---cCcCCc
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA---NSDAFMVARGDL---GMEIPI 268 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~---~sDgImIaRgDL---g~e~~~ 268 (505)
+.+.+.|+|+|.++.-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. .+|.+.+..-.- |..++.
T Consensus 81 ~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~ 158 (228)
T 1h1y_A 81 EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMP 158 (228)
T ss_dssp HHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCG
T ss_pred HHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCH
Confidence 556778999999998777655234444444444 455555633334677889998 789998843221 223333
Q ss_pred hhHHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHH
Q 010627 269 EKIFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQIC 347 (505)
Q Consensus 269 ~~v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 347 (505)
..+..+ -+..+.. +.|+.++.-+ .|. .+..++..|+|++....---....|.++++.+++.+
T Consensus 159 ~~l~~i----~~~~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~ 221 (228)
T 1h1y_A 159 EMMEKV----RALRKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSV 221 (228)
T ss_dssp GGHHHH----HHHHHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHH----HHHHHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHH
Confidence 332222 1222222 7888765432 222 234445559999998644333457999999987765
Q ss_pred H
Q 010627 348 V 348 (505)
Q Consensus 348 ~ 348 (505)
+
T Consensus 222 ~ 222 (228)
T 1h1y_A 222 E 222 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 57
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=90.23 E-value=0.58 Score=44.93 Aligned_cols=148 Identities=14% Similarity=0.037 Sum_probs=95.5
Q ss_pred CCCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcH-------HHHHhcCCe
Q 010627 182 LPTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANF-------DDILANSDA 254 (505)
Q Consensus 182 l~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nl-------deI~~~sDg 254 (505)
-|..|+.|.+.+.+.+.+.|++.|+++ +..+..+++.|. + +++.+-|=-|.|-.+. ++|..-+|.
T Consensus 11 ~p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdE 82 (226)
T 1vcv_A 11 KPYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADE 82 (226)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCE
Confidence 356688888888788999999999987 677888887774 2 7888777554443333 332222454
Q ss_pred eEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCC
Q 010627 255 FMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETA 331 (505)
Q Consensus 255 ImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta 331 (505)
|-+ ..|-| .+=.++.+..-.+.+.++|...+.|||+.|-.| |..|+..... +...|+|.|=-|
T Consensus 83 ID~Vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTS---- 148 (226)
T 1vcv_A 83 IDVVAPIGLV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSS---- 148 (226)
T ss_dssp EEEECCHHHH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECC----
T ss_pred EEEecchhhh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeC----
Confidence 422 22211 011123455555667777766677889877766 5677766555 677899998655
Q ss_pred CCCC--------------HHHHHHHHHHHHHHHh
Q 010627 332 AGAY--------------PEVAVRTMAQICVEAE 351 (505)
Q Consensus 332 ~G~y--------------P~~~V~~m~~i~~~aE 351 (505)
.|.. -++.|+.|++.++++-
T Consensus 149 TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 149 TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred CCCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 4443 3578999998877654
No 58
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.18 E-value=2.1 Score=42.27 Aligned_cols=162 Identities=14% Similarity=0.102 Sum_probs=99.0
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC-CCC-----hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeE
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF-VRK-----GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFM 256 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf-V~s-----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgIm 256 (505)
.++..++..|.+...+.|+|.|=+.+ +.+ ..|..++.+.+.+. .++.+.+.+.+.++++ ..++. .|.|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~---~a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKGFE---AAVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHHHH---HHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHhHH---HHHHCCCCEEE
Confidence 35777777776777789999987754 332 14556666666543 2444444455554443 33333 46554
Q ss_pred E--ecCccc----CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeeccc
Q 010627 257 V--ARGDLG----MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 329 (505)
Q Consensus 257 I--aRgDLg----~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~E 329 (505)
| +-.|.- .....++.....++.++.|+++|++|-+..-+-=+.....+-+..++.+++. +...|+|.+.|. +
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 177 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-D 177 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-E
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-C
Confidence 4 333331 1234566667778899999999999854221110000111234566666665 567899999995 7
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 010627 330 TAAGAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 330 ta~G~yP~~~V~~m~~i~~~a 350 (505)
|.=.-.|.++-+.+..+.+..
T Consensus 178 T~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 178 TIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TTSCCCHHHHHHHHHHHHHHS
T ss_pred CCCCcCHHHHHHHHHHHHHhC
Confidence 777778999999888877654
No 59
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=90.12 E-value=1.2 Score=42.65 Aligned_cols=137 Identities=13% Similarity=0.046 Sum_probs=82.2
Q ss_pred hcccccCCCEEEEcCCC-ChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEE---ecCcccCcCCchh
Q 010627 195 KWGIPNQIDMIALSFVR-KGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMV---ARGDLGMEIPIEK 270 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~-sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImI---aRgDLg~e~~~~~ 270 (505)
+.+.+.|+|+|.+..-. + .++.++.+.+++.|.++.+.-.-.|+ ++.+++++...|.|++ -+|==|-.+..+.
T Consensus 74 ~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~ 150 (231)
T 3ctl_A 74 AQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFIPEM 150 (231)
T ss_dssp HHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCCTTH
T ss_pred HHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCccccHHH
Confidence 55678899999988644 4 46788888888877665555545554 7778888888998875 3321122232222
Q ss_pred HHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec-ccCCCCCC-HHHHHHHHHHH
Q 010627 271 IFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS-GETAAGAY-PEVAVRTMAQI 346 (505)
Q Consensus 271 v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs-~Eta~G~y-P~~~V~~m~~i 346 (505)
+. -.+++-+...+. +.++.+..- -.|..+ ..++..|+|.+... .--.-... |.++++.+++.
T Consensus 151 l~-kI~~lr~~~~~~~~~~~I~VdGG--------I~~~~~-----~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~ 216 (231)
T 3ctl_A 151 LD-KLAELKAWREREGLEYEIEVDGS--------CNQATY-----EKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQ 216 (231)
T ss_dssp HH-HHHHHHHHHHHHTCCCEEEEESC--------CSTTTH-----HHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHhccCCCceEEEECC--------cCHHHH-----HHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHH
Confidence 22 223333333333 455544322 123222 45566799999986 43332335 99999998775
Q ss_pred HH
Q 010627 347 CV 348 (505)
Q Consensus 347 ~~ 348 (505)
+.
T Consensus 217 ~~ 218 (231)
T 3ctl_A 217 IL 218 (231)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 60
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=90.06 E-value=0.52 Score=45.82 Aligned_cols=138 Identities=11% Similarity=0.051 Sum_probs=83.9
Q ss_pred HHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEe---cCcccCcCCc
Q 010627 192 DILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVA---RGDLGMEIPI 268 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIa---RgDLg~e~~~ 268 (505)
.+ +.+.+.|+|+|.+.. +..+++.+..+.+++.|.+..+.-.=.| .++.+++++...|.|++- +| +|.+-=.
T Consensus 101 ~i-~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PG-fgGQ~fi 175 (246)
T 3inp_A 101 LI-ESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPG-FGGQKFI 175 (246)
T ss_dssp HH-HHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTT-C--CCCC
T ss_pred HH-HHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCC-CCCcccc
Confidence 34 566789999999885 4445777777788887766555443345 557788999889988873 33 3332111
Q ss_pred hhHHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHH
Q 010627 269 EKIFLAQKVMIYKCNIQG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQI 346 (505)
Q Consensus 269 ~~v~~~qk~Ii~~~~~~g--kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i 346 (505)
+....-.+++-+.+.+.| .++-+..- -.|.. +..++..|+|.++...--.-...|.++++.+++.
T Consensus 176 ~~~l~KI~~lr~~~~~~~~~~~I~VDGG--------I~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 176 PAMLDKAKEISKWISSTDRDILLEIDGG--------VNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDE 242 (246)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEESS--------CCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEECC--------cCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHH
Confidence 222222333444444445 34433221 12333 3667888999999863322346799999888765
Q ss_pred H
Q 010627 347 C 347 (505)
Q Consensus 347 ~ 347 (505)
+
T Consensus 243 i 243 (246)
T 3inp_A 243 L 243 (246)
T ss_dssp H
T ss_pred H
Confidence 4
No 61
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=89.87 E-value=1.7 Score=44.53 Aligned_cols=119 Identities=18% Similarity=0.258 Sum_probs=69.8
Q ss_pred hhcHHHHHhcccccCCCEEEE--cCCCCh---hHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcCCeeEEecC
Q 010627 187 EKDKEDILKWGIPNQIDMIAL--SFVRKG---SDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANSDAFMVARG 260 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~--sfV~sa---~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~sDgImIaRg 260 (505)
+.+.+.+ +.+++.|+|+|.+ ++-.+. +.++.+|+.. .++.|+++ +-|++....+.+ .-+|+|.|+-+
T Consensus 99 ~~~~e~~-~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~----~~~~Vi~G~V~T~e~A~~a~~--aGaD~I~Vg~g 171 (361)
T 3r2g_A 99 ENELQRA-EALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL----GSRCIMAGNVATYAGADYLAS--CGADIIKAGIG 171 (361)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH----TTCEEEEEEECSHHHHHHHHH--TTCSEEEECCS
T ss_pred HHHHHHH-HHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc----CCCeEEEcCcCCHHHHHHHHH--cCCCEEEEcCC
Confidence 4455666 8889999999987 332232 2344444432 35789996 888776543322 23799999522
Q ss_pred cccCcCCch-----hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 261 DLGMEIPIE-----KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 261 DLg~e~~~~-----~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
- |..+.-. .+| |-..+..|.++.+|||...-+- .-.|+..++..|+|++|+.
T Consensus 172 ~-G~~~~tr~~~g~g~p--~l~aI~~~~~~~~PVIAdGGI~------------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 172 G-GSVCSTRIKTGFGVP--MLTCIQDCSRADRSIVADGGIK------------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp S-SSCHHHHHHHCCCCC--HHHHHHHHTTSSSEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred C-CcCccccccCCccHH--HHHHHHHHHHhCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 1100000 012 3334444444444888654432 2468899999999999994
No 62
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=89.63 E-value=1.5 Score=42.24 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=80.5
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhcc---------CCCceEEEEecCHHHHhcHHHHHhcCCeeEE---ecCcc
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGH---------AKNILLMSKVENQEGVANFDDILANSDAFMV---ARGDL 262 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~---------~~~~~IiakIEt~~av~nldeI~~~sDgImI---aRgDL 262 (505)
+.+.+.|+|+|.+..-.+ +++.++.+.+++. |..+.+...-+|+ ++.+++++...|.|.+ .+| +
T Consensus 86 ~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~pg-f 161 (237)
T 3cu2_A 86 KAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDPR-N 161 (237)
T ss_dssp HHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEETT-T
T ss_pred HHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeeccC-c
Confidence 667889999998887655 6677777788776 5544444444564 6778888888998877 554 2
Q ss_pred cCcCCchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH--cCCceeeecccCCCCCCHHH
Q 010627 263 GMEIPIEKIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVL--DGTDCVMLSGETAAGAYPEV 338 (505)
Q Consensus 263 g~e~~~~~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~--~G~D~imLs~Eta~G~yP~~ 338 (505)
|.+--.+....-.+++-+...+. +.|+.+..-+ +. ..+..++. .|+|++....--... .|.+
T Consensus 162 ggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~~---~~~~~~~~~~aGad~~VvGSaIf~~-d~~~ 227 (237)
T 3cu2_A 162 GTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSM----------TL---ELAKYFKQGTHQIDWLVSGSALFSG-ELKT 227 (237)
T ss_dssp TEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------CH---HHHHHHHHSSSCCCCEEECGGGGSS-CHHH
T ss_pred CCeecChhHHHHHHHHHHHHHhcCCCceEEEECCc----------CH---HHHHHHHHhCCCCcEEEEeeHHhCC-CHHH
Confidence 22211122222222333333222 4666543321 11 23455667 799999986443333 6889
Q ss_pred HHHHHHHH
Q 010627 339 AVRTMAQI 346 (505)
Q Consensus 339 ~V~~m~~i 346 (505)
+++.+++.
T Consensus 228 ~~~~l~~~ 235 (237)
T 3cu2_A 228 NLKVWKSS 235 (237)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888653
No 63
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=89.60 E-value=2.8 Score=40.47 Aligned_cols=45 Identities=13% Similarity=0.162 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCcEE--EEecCCCCHHHHHHHHHHHHHHHHHcCCee
Q 010627 30 VPMIEKLLKAGMNVA--RFNFSHGSHEYHQETLNNLRTAMVNTGILC 74 (505)
Q Consensus 30 ~~~i~~li~~G~~~~--RlN~shg~~~~~~~~i~~ir~~~~~~~~~v 74 (505)
.+.+++.+++|++.+ .+|....+.++..+.++.++++.++++.|+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~v 148 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPL 148 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCE
Confidence 678899999999999 999888888888888888888888777664
No 64
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.12 E-value=7.1 Score=39.20 Aligned_cols=159 Identities=14% Similarity=0.081 Sum_probs=103.2
Q ss_pred CCChhcHHHHHhcccccCCCEEEEc-CCCChhHHHHHHHHHhccCCCceEEEEe-cCHHHHhcHHHHHhc--CC--eeEE
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALS-FVRKGSDLVGVRKLLGGHAKNILLMSKV-ENQEGVANFDDILAN--SD--AFMV 257 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~--sD--gImI 257 (505)
.++..|+..|.+...+.|++.|=+. ++.+++|.+.++.+... ..++.+.+-. =+.++++..-+-+.- .| .+++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 3466677777577677899998774 45688888777765543 3566666664 345565543232222 24 3555
Q ss_pred ecCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHH-HcCCceeeecccCCC
Q 010627 258 ARGDLGM----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAV-LDGTDCVMLSGETAA 332 (505)
Q Consensus 258 aRgDLg~----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav-~~G~D~imLs~Eta~ 332 (505)
+-.|+-. ....++.....+.+++.|+++|+.|.+... ...+-+...+.+++.++ ..|+|.|.| .+|.=
T Consensus 103 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l-~DT~G 175 (325)
T 3eeg_A 103 GSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNI-PDTTG 175 (325)
T ss_dssp ECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEEC-CBSSS
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEe-cCccC
Confidence 5556532 234456666667899999999999866432 12233455666777754 459999999 68888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 010627 333 GAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 333 G~yP~~~V~~m~~i~~~a 350 (505)
.-.|.++-+.+..+.++.
T Consensus 176 ~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 176 YMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp CCCHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 889999888887776543
No 65
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=89.01 E-value=1.5 Score=40.86 Aligned_cols=135 Identities=7% Similarity=0.014 Sum_probs=76.4
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEE-e--cCcccCcCCchhH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMV-A--RGDLGMEIPIEKI 271 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImI-a--RgDLg~e~~~~~v 271 (505)
+.+.+.|+|+|.+.--.. ++..++.+.+.+.| ..++.-+......+.+.++...+|.+++ + +|==|...+...+
T Consensus 78 ~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~ 154 (220)
T 2fli_A 78 EAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECL 154 (220)
T ss_dssp HHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGH
T ss_pred HHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHH
Confidence 556788999998876555 55666666665554 3455545322234445555666798865 2 2211222333222
Q ss_pred HHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHH
Q 010627 272 FLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQI 346 (505)
Q Consensus 272 ~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i 346 (505)
.. -+++-+.+... +.|++++.-+ .| .++..+...|+|++..+.--..+..|.++++.+.+.
T Consensus 155 ~~-i~~~~~~~~~~~~~~~i~v~GGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 155 EK-VATVAKWRDEKGLSFDIEVDGGV--------DN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp HH-HHHHHHHHHHTTCCCEEEEESSC--------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHhcCCCceEEEECcC--------CH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 21 22333333333 5676654321 22 234555566999999976555567799998888654
No 66
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=88.81 E-value=1.7 Score=45.08 Aligned_cols=152 Identities=18% Similarity=0.197 Sum_probs=99.6
Q ss_pred HHHHHhcccccCCCEEEEcCCCChhHHHHHHHH---HhccCCCceEEEEec--CHHHHhcHHHHHhcCCeeEEecCcccC
Q 010627 190 KEDILKWGIPNQIDMIALSFVRKGSDLVGVRKL---LGGHAKNILLMSKVE--NQEGVANFDDILANSDAFMVARGDLGM 264 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~---l~~~~~~~~IiakIE--t~~av~nldeI~~~sDgImIaRgDLg~ 264 (505)
.+.| ....+.|+|.|-++ |.+.++.+.++++ |...+.+++++|-|= -..|+..+++.++..|.+=|-||.+|-
T Consensus 41 v~QI-~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 41 TAQV-LELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHH-HHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS
T ss_pred HHHH-HHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc
Confidence 4445 45567899999888 7888887776554 455678899999884 356888888988899999999999873
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEe-------hhhhHhhh----cCCCCChH-----H--HH----HHHHHHHcCC-
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTA-------TQMLESMI----KSPRPTRA-----E--AT----DVANAVLDGT- 321 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~A-------TqmLeSM~----~~~~ptra-----E--v~----Dv~nav~~G~- 321 (505)
..+...--+.++++|+++|+|+=+- -.+|+.+- ..|.|.-+ | +. .+.-+...|+
T Consensus 119 ---~~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~ 195 (406)
T 4g9p_A 119 ---GRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLG 195 (406)
T ss_dssp ---THHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ---cccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCC
Confidence 1223344568999999999997332 23444442 24555321 1 11 1111233455
Q ss_pred -ceeeecccCCCCCCHHHHHHHHHHHHHH
Q 010627 322 -DCVMLSGETAAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 322 -D~imLs~Eta~G~yP~~~V~~m~~i~~~ 349 (505)
|=+++|--.+ .+..+|+.-+.+.+.
T Consensus 196 ~~~iviS~KaS---dv~~~i~aYr~la~~ 221 (406)
T 4g9p_A 196 EDKLVLSAKVS---KARDLVWVYRELARR 221 (406)
T ss_dssp GGGEEEEEECS---SHHHHHHHHHHHHHH
T ss_pred hhheEEEeecC---CHHHHHHHHHHHHHh
Confidence 6688886555 466777766666544
No 67
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=88.68 E-value=1.1 Score=43.22 Aligned_cols=142 Identities=15% Similarity=0.122 Sum_probs=92.8
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHH--------HHHhcCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFD--------DILANSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nld--------eI~~~sDg 254 (505)
|.-|..|.+.+.+-+.+.|++.|+++ +..+ .+++.+.... .+++.+-+=-|.|-...+ .|-.-+|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56688888888788899999999986 6677 7777775321 467777773333322222 22222565
Q ss_pred eEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeeccc
Q 010627 255 FMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPV--VTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 329 (505)
Q Consensus 255 ImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpv--i~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~E 329 (505)
|=+ ..|.|- +.+..-.+.+.++|..+|+|+ |+.|-.| |..|+..... +...|+|.|=-
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~~e~i~~a~ria~eaGADfVKT--- 167 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPLW---------DDKTLSLLVDSSRRAGADIVKT--- 167 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGGS---------CHHHHHHHHHHHHHTTCSEEES---
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccCC---------CHHHHHHHHHHHHHhCCCEEEe---
Confidence 533 333332 155566678888999989997 7666543 5667766555 67789999754
Q ss_pred CCCCCCH-----HHHHHH--HHHHHH
Q 010627 330 TAAGAYP-----EVAVRT--MAQICV 348 (505)
Q Consensus 330 ta~G~yP-----~~~V~~--m~~i~~ 348 (505)
+.|..| .+.|+. |++++.
T Consensus 168 -sTG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 168 -STGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp -CCSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred -CCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 466665 788888 876553
No 68
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=88.47 E-value=4.4 Score=41.12 Aligned_cols=112 Identities=15% Similarity=0.229 Sum_probs=66.1
Q ss_pred HHHHhcccccCCCEEEEcCCCC-hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEE-ecC---cccCc
Q 010627 191 EDILKWGIPNQIDMIALSFVRK-GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMV-ARG---DLGME 265 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~s-a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImI-aRg---DLg~e 265 (505)
+.+ +.+.+.|+|+|.+++-.. .+.++.+++ . .+.++.++-|.+-...+.+ .-+|+|.+ ++. -.|..
T Consensus 113 ~~~-~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~a~~a~~--~GaD~i~v~g~~~GGh~g~~ 183 (369)
T 3bw2_A 113 AKL-AVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEEARAVEA--AGADAVIAQGVEAGGHQGTH 183 (369)
T ss_dssp HHH-HHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHHHHHHHH--TTCSEEEEECTTCSEECCCS
T ss_pred HHH-HHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHHHHHHHH--cCCCEEEEeCCCcCCcCCCc
Confidence 344 777889999999987543 455555554 2 4678888877653322221 23799999 541 11221
Q ss_pred CC--------chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 266 IP--------IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 266 ~~--------~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.+ ...+ ..-+++ ....++|++.+.-+- .-.++..++..|+|++++.
T Consensus 184 ~~~~~~~~~~~~~~-~~l~~i---~~~~~iPViaaGGI~------------~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 184 RDSSEDDGAGIGLL-SLLAQV---REAVDIPVVAAGGIM------------RGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SCCGGGTTCCCCHH-HHHHHH---HHHCSSCEEEESSCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccccccHH-HHHHHH---HHhcCceEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11 1111 111222 223589999876542 1246677888999999985
No 69
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.04 E-value=3.1 Score=38.74 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=71.2
Q ss_pred HHHHHhcccccCCCEEEEcCCC--Ch-hHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh-cCCeeEEecCcccCc
Q 010627 190 KEDILKWGIPNQIDMIALSFVR--KG-SDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA-NSDAFMVARGDLGME 265 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~--sa-~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-~sDgImIaRgDLg~e 265 (505)
.+.+ +.+++.|+|+|.+.... ++ +.+.++.+.+++......++..+-|++-... ..+ -+|.|++......-.
T Consensus 78 ~~~i-~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~~~g~t~~ 153 (223)
T 1y0e_A 78 SKEV-DELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKN---AARLGFDYIGTTLHGYTSY 153 (223)
T ss_dssp HHHH-HHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHH---HHHTTCSEEECTTTTSSTT
T ss_pred HHHH-HHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHH---HHHcCCCEEEeCCCcCcCC
Confidence 3456 66788899999876543 22 2333333333333224566676666543322 222 268888754322211
Q ss_pred -CCch-hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHH
Q 010627 266 -IPIE-KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTM 343 (505)
Q Consensus 266 -~~~~-~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m 343 (505)
.+.. ..+. ...+-+.+...+.|++...-+ -|. .|+..+...|+|++++. +++-+ |.+..+.+
T Consensus 154 ~~~~~~~~~~-~~~~~~~~~~~~ipvia~GGI---------~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 154 TQGQLLYQND-FQFLKDVLQSVDAKVIAEGNV---------ITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKRF 217 (223)
T ss_dssp STTCCTTHHH-HHHHHHHHHHCCSEEEEESSC---------CSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CCCCCCCccc-HHHHHHHHhhCCCCEEEecCC---------CCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHHH
Confidence 1110 1111 122223334468999875432 233 45566677799999996 34444 76666665
Q ss_pred HH
Q 010627 344 AQ 345 (505)
Q Consensus 344 ~~ 345 (505)
.+
T Consensus 218 ~~ 219 (223)
T 1y0e_A 218 VQ 219 (223)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 70
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=88.02 E-value=21 Score=36.36 Aligned_cols=159 Identities=10% Similarity=0.105 Sum_probs=107.6
Q ss_pred CCChhcHHHHHhcccccCCCEEEE-cCCCChhHHHHHHHHHhccCCCceEEEEec-CHHHHhcHHHHHhcC--C--eeEE
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIAL-SFVRKGSDLVGVRKLLGGHAKNILLMSKVE-NQEGVANFDDILANS--D--AFMV 257 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~-sfV~sa~dv~~v~~~l~~~~~~~~IiakIE-t~~av~nldeI~~~s--D--gImI 257 (505)
.++..|+..|.+...+.|++.|=+ +++.++.|.+.++.+... ..+..+.+-.= +...++..-+-+..+ | .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 468888888866667789999866 466788899999887653 45555555442 455554433322222 4 4566
Q ss_pred ecCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCCC
Q 010627 258 ARGDLGM----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETAA 332 (505)
Q Consensus 258 aRgDLg~----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta~ 332 (505)
+-.|+-. ....+++......+++.|+.+|..|.+..+ ...+-+...+.+++. +...|+|.|.| .+|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l-~DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINI-PDTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEE-ECSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEe-cCccC
Confidence 6666532 345567777778899999999998865433 122333445566655 56789999999 68988
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 010627 333 GAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 333 G~yP~~~V~~m~~i~~~a 350 (505)
.-.|-++-+.+..+.+..
T Consensus 182 ~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CCCHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 889999888888877654
No 71
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=87.92 E-value=22 Score=35.00 Aligned_cols=197 Identities=15% Similarity=0.130 Sum_probs=121.4
Q ss_pred CCChhcHHHHHhcccccCCCEEEEc-CCCChhHHHHHHHHHhccCCCceEEEEecC-HHHHhcHHHHHhc--CC--eeEE
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALS-FVRKGSDLVGVRKLLGGHAKNILLMSKVEN-QEGVANFDDILAN--SD--AFMV 257 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakIEt-~~av~nldeI~~~--sD--gImI 257 (505)
.++..|+..|.+...+.|++.|=+. +..++.|.+.++.+... .+++.+.+..-+ ...++..-+-+.. .| .+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 4577788888677777899998664 34567777777765543 356677776643 3344333222211 24 4555
Q ss_pred ecCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCCC
Q 010627 258 ARGDLGM----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETAA 332 (505)
Q Consensus 258 aRgDLg~----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta~ 332 (505)
+-.|+-. ....++.....+++++.|+++|..|.+... ..++-+...+.+++. +...|+|.|.| .+|.=
T Consensus 102 ~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l-~DT~G 174 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINI-PDTVG 174 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEE-ECSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEe-cCCCC
Confidence 6556532 345567777788999999999999876432 222334455666666 55689999999 68888
Q ss_pred CCCHHHHHHHHHHHHHHHhcc--cCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCc
Q 010627 333 GAYPEVAVRTMAQICVEAEST--LDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGG 400 (505)
Q Consensus 333 G~yP~~~V~~m~~i~~~aE~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG 400 (505)
.-.|.++-+.+..+.+..-.. ....-+++ + .--+|.+-..+|-+.+++ .|=-|-.|
T Consensus 175 ~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~H----------n-d~Gla~AN~laA~~aGa~-~vd~sv~G 232 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREIKQFDDIIFASHCH----------D-DLGMATANALAAIENGAR-RVEGTING 232 (293)
T ss_dssp CCCHHHHHHHHHHHHHHCTTGGGSEEEEECB----------C-TTSCHHHHHHHHHHTTCC-EEEEBGGG
T ss_pred CCCHHHHHHHHHHHHHhcCCccCceEEEEeC----------C-CcChHHHHHHHHHHhCCC-EEEeeccc
Confidence 889998888887776543210 00011111 1 112355556667788988 45555544
No 72
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.67 E-value=2.3 Score=49.34 Aligned_cols=127 Identities=12% Similarity=0.140 Sum_probs=74.6
Q ss_pred hhcHHHHHhcccccCCCEEEEcCC---------------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFV---------------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN 251 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV---------------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~ 251 (505)
..+...+.+.+.+.|+|+|.+.+- ++++.+.++-+.+.+. .+++|+.|+ ++ .+.++.+++..
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~ 723 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARA 723 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHH
Confidence 344444446666789999998542 3444455555555432 257899998 32 34455666554
Q ss_pred -----CCeeEEe-----------------------cCcccCcCCchhHHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcC
Q 010627 252 -----SDAFMVA-----------------------RGDLGMEIPIEKIFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKS 302 (505)
Q Consensus 252 -----sDgImIa-----------------------RgDLg~e~~~~~v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~ 302 (505)
+|+|.+. |...+.--+....+.....+-+..++. +.|+|...-+-
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~------ 797 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID------ 797 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC------
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC------
Confidence 5999881 111111112233444444444444455 78988755433
Q ss_pred CCCChHHHHHHHHHHHcCCceeeecc
Q 010627 303 PRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 303 ~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
...|+..++..|+|++|+..
T Consensus 798 ------s~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 798 ------SAESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp ------SHHHHHHHHHTTCSEEEESH
T ss_pred ------CHHHHHHHHHcCCCEEEEee
Confidence 24577888889999999953
No 73
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=87.60 E-value=2.1 Score=39.45 Aligned_cols=131 Identities=13% Similarity=0.170 Sum_probs=72.9
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe--cCHHHHhcHHHHHh-cCCeeEEecCcccCcCCchhH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV--ENQEGVANFDDILA-NSDAFMVARGDLGMEIPIEKI 271 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--Et~~av~nldeI~~-~sDgImIaRgDLg~e~~~~~v 271 (505)
+.+.+.|+|+|.++.-...+.+.++++.+++.|..+ -++.. .|+.. .+.++.+ -.|.+-+.++-.+...+....
T Consensus 71 ~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~-gv~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~ 147 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGV-VVDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFDL 147 (207)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEE-EEECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCCT
T ss_pred HHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCce-EEEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCch
Confidence 556788999999877666678888888887665442 12232 13322 1222322 268873333332222222111
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHH
Q 010627 272 FLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQ 345 (505)
Q Consensus 272 ~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~ 345 (505)
. +++-+.+.. ..|+++..-+ .|. .+..++..|+|++....--.....|.++++.+.+
T Consensus 148 ~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 148 N---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp H---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred H---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 1 333333333 6787653221 121 4566788899999986544344568888877654
No 74
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=87.47 E-value=4.3 Score=38.71 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=77.5
Q ss_pred HHHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCc--
Q 010627 190 KEDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGME-- 265 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e-- 265 (505)
.+++ ..+++.|+|+|.+-- ..+++.+.++.+.+++. .+.+++.+-+.+-...+.+ .-+|.|.+.-..+...
T Consensus 91 ~~~i-~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~~a~~--~Gad~Ig~~~~g~t~~~~ 165 (232)
T 3igs_A 91 LDDV-DALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDDGLACQR--LGADIIGTTMSGYTTPDT 165 (232)
T ss_dssp HHHH-HHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH--TTCSEEECTTTTSSSSSC
T ss_pred HHHH-HHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHHHHHHHh--CCCCEEEEcCccCCCCCC
Confidence 3455 566888999997643 34667777777777654 4677777665443322221 1268775421112110
Q ss_pred CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHH
Q 010627 266 IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQ 345 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~ 345 (505)
.....+.. -+++ ++.+.|++...- .-|. .|+..+...|+|++++. +++.+ |-+..+.+.+
T Consensus 166 ~~~~~~~~-i~~l----~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~~ 225 (232)
T 3igs_A 166 PEEPDLPL-VKAL----HDAGCRVIAEGR---------YNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYND 225 (232)
T ss_dssp CSSCCHHH-HHHH----HHTTCCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCHHH-HHHH----HhcCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHHH
Confidence 11112222 2222 223899986543 3333 46667777899999995 55655 8777777766
Q ss_pred HHHH
Q 010627 346 ICVE 349 (505)
Q Consensus 346 i~~~ 349 (505)
.+++
T Consensus 226 ~i~~ 229 (232)
T 3igs_A 226 ALKK 229 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 75
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.42 E-value=0.72 Score=44.03 Aligned_cols=134 Identities=8% Similarity=0.076 Sum_probs=75.5
Q ss_pred hcccccCCCEEEEcCC--CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCccc--C-cCCch
Q 010627 195 KWGIPNQIDMIALSFV--RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLG--M-EIPIE 269 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV--~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg--~-e~~~~ 269 (505)
+.+.+.|+|+|.++.- .+ +...++.+.+.+.|..+.+...-.|+ .+.+.++++.+|.|.+..-.-| - ..+ +
T Consensus 79 ~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~-~ 154 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI-P 154 (230)
T ss_dssp HHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC-G
T ss_pred HHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc-H
Confidence 5567889999999875 43 45556666666655544443333554 5567888888998877543322 1 122 1
Q ss_pred hHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHH
Q 010627 270 KIFLAQKVMIYKCNI--QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQ 345 (505)
Q Consensus 270 ~v~~~qk~Ii~~~~~--~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~ 345 (505)
....-.+++-+.+.+ .+.|+.+..-+ .+.. + ......|+|++....--.....|.++++.+++
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GGI--------~~~~--~---~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGGL--------KPNN--T---WQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESSC--------CTTT--T---HHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECCc--------CHHH--H---HHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 222222333333332 36777553321 2222 2 34445699999996443334468888888754
No 76
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=87.38 E-value=1.3 Score=42.16 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=92.7
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHH--------hcCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDIL--------ANSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~--------~~sDg 254 (505)
|..|..|.+.+.+-+.+.|++.|+++ +..+..+++.+. +.++.+.+-+=.|.|-.+.+..+ .-+|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56688888888788899999999876 667888887774 44578888886655543333222 22455
Q ss_pred eEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCC
Q 010627 255 FMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETA 331 (505)
Q Consensus 255 ImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta 331 (505)
|-+ ..|.|- +=..+.+..-.+.+.++|...+.|||+.|-.| |..|+..... +...|+|.|=-|
T Consensus 88 vd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l---------~~e~i~~a~~ia~eaGADfVKTs---- 153 (220)
T 1ub3_A 88 VDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGYF---------SPEEIARLAEAAIRGGADFLKTS---- 153 (220)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECC----
T ss_pred EEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCCC---------CHHHHHHHHHHHHHhCCCEEEeC----
Confidence 432 222220 00123445555666677766667788776553 6677766655 677899998655
Q ss_pred CCCC----HHHHHHHHHHHH
Q 010627 332 AGAY----PEVAVRTMAQIC 347 (505)
Q Consensus 332 ~G~y----P~~~V~~m~~i~ 347 (505)
.|.. -.+.|+.|++..
T Consensus 154 TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 4443 348899988764
No 77
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.25 E-value=3.2 Score=41.37 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=64.9
Q ss_pred HHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEE-ecCcccCcCCchh
Q 010627 192 DILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMV-ARGDLGMEIPIEK 270 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImI-aRgDLg~e~~~~~ 270 (505)
.+ +.+.+.|+|+|.+++=...+.++.+++ . .++++.++-+.+....+ ...-+|+|.+ ++ .-|-..+...
T Consensus 88 ~~-~~~~~~g~d~V~~~~g~p~~~~~~l~~----~--gi~vi~~v~t~~~a~~~--~~~GaD~i~v~g~-~~GG~~G~~~ 157 (328)
T 2gjl_A 88 YR-AAIIEAGIRVVETAGNDPGEHIAEFRR----H--GVKVIHKCTAVRHALKA--ERLGVDAVSIDGF-ECAGHPGEDD 157 (328)
T ss_dssp HH-HHHHHTTCCEEEEEESCCHHHHHHHHH----T--TCEEEEEESSHHHHHHH--HHTTCSEEEEECT-TCSBCCCSSC
T ss_pred HH-HHHHhcCCCEEEEcCCCcHHHHHHHHH----c--CCCEEeeCCCHHHHHHH--HHcCCCEEEEECC-CCCcCCCCcc
Confidence 44 667889999999987655444444433 3 47888888776544322 2234799998 43 1121111100
Q ss_pred HHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 271 IFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 271 v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.+.+ ..+-+.....+.|++.+.-+- .-.|+..++..|+|++++.
T Consensus 158 ~~~~-~~l~~v~~~~~iPviaaGGI~------------~~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 158 IPGL-VLLPAAANRLRVPIIASGGFA------------DGRGLVAALALGADAINMG 201 (328)
T ss_dssp CCHH-HHHHHHHTTCCSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred ccHH-HHHHHHHHhcCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 0111 111122223489999876532 1246677788899999984
No 78
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=87.00 E-value=5 Score=38.97 Aligned_cols=128 Identities=13% Similarity=0.052 Sum_probs=79.8
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHH----------hcHHHHHhc-CCe
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGV----------ANFDDILAN-SDA 254 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av----------~nldeI~~~-sDg 254 (505)
+..|.+.+.+.+.+.|++.|+++ +.-+..+. ..++.++.++.+.-++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 56777777688999999999988 44444433 2346677777654443 334555554 676
Q ss_pred eEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHh-hhcCCCCChHHHHHH-HHHHHcCCceeeec
Q 010627 255 FMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLES-MIKSPRPTRAEATDV-ANAVLDGTDCVMLS 327 (505)
Q Consensus 255 ImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeS-M~~~~~ptraEv~Dv-~nav~~G~D~imLs 327 (505)
|-+ |-.++ +-...++...-+++.+.|+++|.|+|+-+. ++- -..+. .+..++... .-+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~~-~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVNE-TAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCCT-TCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCccccC-CCHHHHHHHHHHHHHcCCCEEEEc
Confidence 654 34444 234456677778999999999999886211 100 00000 055566553 44788999998887
No 79
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=86.71 E-value=3.2 Score=42.17 Aligned_cols=124 Identities=20% Similarity=0.167 Sum_probs=70.4
Q ss_pred hcHHHHHhccccc--CCCEEEEcCC-CChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhc-CCeeEEecCcc
Q 010627 188 KDKEDILKWGIPN--QIDMIALSFV-RKGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILAN-SDAFMVARGDL 262 (505)
Q Consensus 188 ~D~~di~~~al~~--g~d~V~~sfV-~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-sDgImIaRgDL 262 (505)
.+.+.+ ...++. |+|.+.+..- ....++.+.-+.+++...++.|+++ +-|++... ...++ +|+|.++-|-=
T Consensus 118 ~~~~~~-~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~---~a~~aGaD~I~v~~g~G 193 (351)
T 2c6q_A 118 SDFEQL-EQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVE---ELILSGADIIKVGIGPG 193 (351)
T ss_dssp HHHHHH-HHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHH---HHHHTTCSEEEECSSCS
T ss_pred HHHHHH-HHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHH---HHHHhCCCEEEECCCCC
Confidence 344455 555665 8998876532 2233333333333333235666654 66654433 22333 79998864320
Q ss_pred cCc-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 263 GME-------IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 263 g~e-------~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
+.+ .+.+ ....-..+.+.+...+.|+|.+.-+. .-.|++.|+..|+|++++..
T Consensus 194 ~~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 194 SVCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp TTBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred cCcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccH
Confidence 001 0111 22334566667777899999766544 35789999999999999853
No 80
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=86.65 E-value=5.5 Score=37.03 Aligned_cols=132 Identities=12% Similarity=0.006 Sum_probs=72.1
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLA 274 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~ 274 (505)
+.+.+.|+|+|.++.- ...+..+++... ...+.+-+.|.+-+.. ....-+|.|+++..--+...+- ..+.-
T Consensus 82 ~~a~~~gad~v~l~~~--~~~~~~~~~~~~----~~~ig~sv~t~~~~~~--a~~~gaD~i~~~~~f~~~~~~g-~~~~~ 152 (221)
T 1yad_A 82 DIALFSTIHRVQLPSG--SFSPKQIRARFP----HLHIGRSVHSLEEAVQ--AEKEDADYVLFGHVFETDCKKG-LEGRG 152 (221)
T ss_dssp HHHHTTTCCEEEECTT--SCCHHHHHHHCT----TCEEEEEECSHHHHHH--HHHTTCSEEEEECCC-----------CH
T ss_pred HHHHHcCCCEEEeCCC--ccCHHHHHHHCC----CCEEEEEcCCHHHHHH--HHhCCCCEEEECCccccCCCCC-CCCCC
Confidence 4457789999988753 234555665442 3455555655443322 1223379999976311111100 00111
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 275 QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 275 qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
...+-+.+...+.|++.+.-+ +. .++..++..|+|++.++.--...+.|.++++.+.+.++
T Consensus 153 ~~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 153 VSLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp HHHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 122333344458999876543 22 24566667899999997554434568888877766554
No 81
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=85.96 E-value=3.7 Score=40.06 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=80.8
Q ss_pred hcccccCCCEEEEcCCC--C---------hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 195 KWGIPNQIDMIALSFVR--K---------GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~--s---------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
+.+.+.|+|+|....-. + .+.++.+++++.+. .+.+++-+-.+..++-+.+ ..|.+-||.+++.
T Consensus 44 ~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~~kIga~~~~ 118 (262)
T 1zco_A 44 EFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAK---YSDILQIGARNSQ 118 (262)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHH---HCSEEEECGGGTT
T ss_pred HHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHh---hCCEEEECccccc
Confidence 66778899988765432 1 77888899988765 4789998888777665555 4799999988764
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHc-CCceeeec--ccCCCCCCHHHHH
Q 010627 264 MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLS--GETAAGAYPEVAV 340 (505)
Q Consensus 264 ~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~-G~D~imLs--~Eta~G~yP~~~V 340 (505)
- ..+++++.+.||||++.|-| .+|-.|+.+.+..+.. |.+-++|- |=+..-.||.+.+
T Consensus 119 n-----------~~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v 179 (262)
T 1zco_A 119 N-----------FELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTL 179 (262)
T ss_dssp C-----------HHHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBC
T ss_pred C-----------HHHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhc
Confidence 2 12334444589999986543 2577888877776654 55444442 2123336665533
No 82
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=85.68 E-value=3.6 Score=42.39 Aligned_cols=119 Identities=17% Similarity=0.294 Sum_probs=68.2
Q ss_pred cHHHHHhcccccCCCEEEE--cCCCChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhc-CCeeEEecCcccC
Q 010627 189 DKEDILKWGIPNQIDMIAL--SFVRKGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+.+.+ +.+++.|+|+|.+ ++ .+++.+.++-+.+++.-.+++|++ -+.+.+-.+.+ .+. +|+|.++-+ -|.
T Consensus 154 ~~~~a-~~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a---~~~Gad~I~vg~~-~G~ 227 (404)
T 1eep_A 154 TIERV-EELVKAHVDILVIDSAH-GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDL---ISVGADCLKVGIG-PGS 227 (404)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHH---HTTTCSEEEECSS-CST
T ss_pred HHHHH-HHHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHH---HhcCCCEEEECCC-CCc
Confidence 44555 6678899999987 44 333434433333433322567775 56665443333 333 799999421 111
Q ss_pred --------cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 265 --------EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 265 --------e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
..+... ......+.+.+...+.|+|.+.-+- ...|+..++..|+|++++
T Consensus 228 ~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~------------~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 228 ICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR------------FSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp TSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC------------SHHHHHHHHHHTCSEEEE
T ss_pred CcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC------------CHHHHHHHHHcCCCHHhh
Confidence 011111 2233445555555789998755432 246788899999999999
No 83
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=84.15 E-value=5.6 Score=37.64 Aligned_cols=145 Identities=13% Similarity=0.109 Sum_probs=82.8
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHH-------Hh-cCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDI-------LA-NSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI-------~~-~sDg 254 (505)
|..|+.|.+.+.+-+.+.|++.|+++ ++-+..+++.+. .+++.+-++.|.|....... ++ -+|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 56788888888677778999998754 566777777764 57888888877776544322 11 1465
Q ss_pred eE--EecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCC
Q 010627 255 FM--VARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETA 331 (505)
Q Consensus 255 Im--IaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta 331 (505)
|= +.-|-+.. .+...+.+. +++.+++..|+++-- ++|+ +.-|..|+.+++. +...|+|++..|.--.
T Consensus 87 Id~viN~g~~~~----~~~~~~~~~-i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~~ 156 (225)
T 1mzh_A 87 LDIVWNLSAFKS----EKYDFVVEE-LKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGFA 156 (225)
T ss_dssp EEEECCHHHHHT----TCHHHHHHH-HHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSCS
T ss_pred EEEEecHHHHhc----CChHHHHHH-HHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 54 21111100 112233333 555555544876532 2322 3346667777766 4566999994432111
Q ss_pred CCCCHHHHHHHHHH
Q 010627 332 AGAYPEVAVRTMAQ 345 (505)
Q Consensus 332 ~G~yP~~~V~~m~~ 345 (505)
.|.+-.+.++.|.+
T Consensus 157 ~gga~~~~i~~v~~ 170 (225)
T 1mzh_A 157 PRGTTLEEVRLIKS 170 (225)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 23334566666544
No 84
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=83.40 E-value=5.2 Score=38.39 Aligned_cols=104 Identities=13% Similarity=0.217 Sum_probs=59.0
Q ss_pred EEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHH----------
Q 010627 205 IALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLA---------- 274 (505)
Q Consensus 205 V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~---------- 274 (505)
|.+=...+++++..+-+.+-+.|-+ .|-.-.-++.+++.+.+|.+..+.+.||-|-. +..+.+..+
T Consensus 37 v~Vir~~~~~~a~~~a~al~~gGi~-~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV---lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 37 IPVIAIDNAEDIIPLGKVLAENGLP-AAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI---LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTCEEEEECC---CSHHHHHHHHHHTCSEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc---CCHHHHHHHHHcCCCEEEe
Confidence 4444556666666665555444432 12223345566666666665443455554421 122222222
Q ss_pred ---HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 275 ---QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 275 ---qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
-..+++.|+++|.|++-- -.-.+++..|...|+|.+-+
T Consensus 113 P~~~~~vi~~~~~~gi~~ipG--------------v~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 113 PGFNPNTVRACQEIGIDIVPG--------------VNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp SSCCHHHHHHHHHHTCEEECE--------------ECSHHHHHHHHHTTCCEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEcC--------------CCCHHHHHHHHHcCCCEEEE
Confidence 257889999999998521 11245668889999999987
No 85
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=82.73 E-value=5.8 Score=38.83 Aligned_cols=129 Identities=16% Similarity=0.101 Sum_probs=77.2
Q ss_pred HHHhcccccCCCEEEEc-CCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCc-CCch
Q 010627 192 DILKWGIPNQIDMIALS-FVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGME-IPIE 269 (505)
Q Consensus 192 di~~~al~~g~d~V~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e-~~~~ 269 (505)
.+ ..+...|+|+|.+. -.-+.+++.++.+...+.| +.+++-+-|.+-++...+ .-+|.|-+..-||... .+++
T Consensus 127 qv-~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lG--l~~lvev~t~ee~~~A~~--~Gad~IGv~~r~l~~~~~dl~ 201 (272)
T 3qja_A 127 QI-HEARAHGADMLLLIVAALEQSVLVSMLDRTESLG--MTALVEVHTEQEADRALK--AGAKVIGVNARDLMTLDVDRD 201 (272)
T ss_dssp HH-HHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH--HTCSEEEEESBCTTTCCBCTT
T ss_pred HH-HHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHH--CCCCEEEECCCcccccccCHH
Confidence 45 56678899999982 2334677888777776654 455666666554443332 1379888886666432 2333
Q ss_pred hHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHH
Q 010627 270 KIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMA 344 (505)
Q Consensus 270 ~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~ 344 (505)
.+. ++ +... ++|++... ..-|.. |+......|+||++...---....|-++++.+.
T Consensus 202 ~~~----~l---~~~v~~~~pvVaeg---------GI~t~e---dv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 202 CFA----RI---APGLPSSVIRIAES---------GVRGTA---DLLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp HHH----HH---GGGSCTTSEEEEES---------CCCSHH---HHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred HHH----HH---HHhCcccCEEEEEC---------CCCCHH---HHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 322 22 2222 67777532 233344 556666779999999543334457888777764
No 86
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=82.68 E-value=4.9 Score=38.82 Aligned_cols=149 Identities=12% Similarity=0.085 Sum_probs=88.7
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh--------cCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA--------NSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--------~sDg 254 (505)
|..|+.|.+.+.+.+.+.|+..|+++ +..+..+++.|. +..++|.+=|=-|.|-...+.-+. -+|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56688888777688889999999986 778899999884 456777777755554433332221 1343
Q ss_pred eE--EecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCC
Q 010627 255 FM--VARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETA 331 (505)
Q Consensus 255 Im--IaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta 331 (505)
|= |..|.|- +=.++.+..-.+.+.++|...-.+||+-|-.| |..|+..... +...|+|.|=-|.==.
T Consensus 112 IDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 112 VDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred EEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 32 1222111 00112344444556666643324556655544 5667766555 4677999987662211
Q ss_pred CCCCHHHHHHHHHHHH
Q 010627 332 AGAYPEVAVRTMAQIC 347 (505)
Q Consensus 332 ~G~yP~~~V~~m~~i~ 347 (505)
.|---++.|+.|++.+
T Consensus 182 ~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 182 THGATPEDVKLMKDTV 197 (239)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhh
Confidence 2223458899998865
No 87
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=82.50 E-value=8.8 Score=36.42 Aligned_cols=109 Identities=12% Similarity=0.134 Sum_probs=68.3
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccC
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+..+...+.+.+++.|++.|=+.+ +++...+.++++.++. .+..+-+-. .---+.++.-+++ +|+++.+-.|
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d--- 99 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN--- 99 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC---
Confidence 344444554888899999999996 5666666666555443 244444432 1111344444433 7999765333
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
..+++.|+++|+|++..+ .| .+++..|...|+|.+.+
T Consensus 100 -----------~~v~~~ar~~g~~~i~Gv-----------~t---~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----------PKIVKLCQDLNFPITPGV-----------NN---PMAIEIALEMGISAVKF 136 (224)
T ss_dssp -----------HHHHHHHHHTTCCEECEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEecc-----------CC---HHHHHHHHHCCCCEEEE
Confidence 456789999999987532 22 23347788899999999
No 88
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=82.19 E-value=4.2 Score=40.34 Aligned_cols=149 Identities=15% Similarity=0.099 Sum_probs=88.1
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh--------cCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA--------NSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--------~sDg 254 (505)
|..|+.|.+.+.+.+.+.|+..|+++ +..+..+++.|. +..++|.+=|=-|.|-...+.-+. -+|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 55688888877688889999999987 778999999884 446788777765554333322221 1444
Q ss_pred eE--EecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCC
Q 010627 255 FM--VARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETA 331 (505)
Q Consensus 255 Im--IaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta 331 (505)
|= |..|.|- +=.++.+..-.+.+.++|......||+-|-.| |..|+..... +...|+|.|=-| |-
T Consensus 143 IDmVINig~lk-~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~L---------t~eei~~A~~ia~eaGADfVKTS--TG 210 (288)
T 3oa3_A 143 LDMVMNYPWLS-EKRYTDVFQDIRAVRLAAKDAILKVILETSQL---------TADEIIAGCVLSSLAGADYVKTS--TG 210 (288)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHTTCSEEECC--CS
T ss_pred EEEEeehhhhc-CCcHHHHHHHHHHHHHHhcCCCceEEEECCCC---------CHHHHHHHHHHHHHcCCCEEEcC--CC
Confidence 32 2211110 00112333333444444433223455555433 5677765444 677899998766 32
Q ss_pred C--CCCHHHHHHHHHHHHHH
Q 010627 332 A--GAYPEVAVRTMAQICVE 349 (505)
Q Consensus 332 ~--G~yP~~~V~~m~~i~~~ 349 (505)
. |.--++.|+.|+++++.
T Consensus 211 f~~~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 211 FNGPGASIENVSLMSAVCDS 230 (288)
T ss_dssp SSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 2 23345789999998753
No 89
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=82.04 E-value=5.1 Score=38.20 Aligned_cols=128 Identities=9% Similarity=0.052 Sum_probs=76.7
Q ss_pred CCEEEEcCCCChhHHHHHHH---HHhccCCCceEEEEecCHHHHhcHHHHHh--cCCeeEEecCcc---cCcCCchhHHH
Q 010627 202 IDMIALSFVRKGSDLVGVRK---LLGGHAKNILLMSKVENQEGVANFDDILA--NSDAFMVARGDL---GMEIPIEKIFL 273 (505)
Q Consensus 202 ~d~V~~sfV~sa~dv~~v~~---~l~~~~~~~~IiakIEt~~av~nldeI~~--~sDgImIaRgDL---g~e~~~~~v~~ 273 (505)
+|++.+..-.+.+++.+.-+ .+++.|.++.+--.-.|+ ++.+++++. ..|.|++..-+- |-.+....+..
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~k 163 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGK 163 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHH
Confidence 99998876555446777777 787777666655444554 778999999 799998754333 32233222222
Q ss_pred HHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 274 AQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 274 ~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
++ +..+.. +.++.+..-+ +.. .+..++..|+|.+....--.-...|.++++.+++.+.
T Consensus 164 i~----~lr~~~~~~~I~VdGGI----------~~~---ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 164 VS----FLRKKYKNLNIQVDGGL----------NIE---TTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HH----HHHHHCTTCEEEEESSC----------CHH---HHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HH----HHHHhccCCeEEEECCC----------CHH---HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 22 111111 5555543321 222 3455666799999985332233469999999877543
No 90
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=81.92 E-value=6.4 Score=40.60 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=79.2
Q ss_pred hcccccCCCEEEEcCC-----------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 195 KWGIPNQIDMIALSFV-----------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
+.+.++|+|+|...-- -..+..+.++++..+. .+.+++-+-.+..++-+ .+..|.+-||.+++.
T Consensus 163 ~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l---~~~vd~lkIgs~~~~ 237 (385)
T 3nvt_A 163 ESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVA---LDYVDVIQIGARNMQ 237 (385)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHH---TTTCSEEEECGGGTT
T ss_pred HHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHH---HhhCCEEEECccccc
Confidence 6677889998865421 1257788888887665 47899988777666554 456899999988775
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHc-CCceeeec
Q 010627 264 MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLS 327 (505)
Q Consensus 264 ~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~-G~D~imLs 327 (505)
. ..+++++.+.||||++.|.|. .|-.|+...+..+.. |.+-++|.
T Consensus 238 n-----------~~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 238 N-----------FELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp C-----------HHHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred C-----------HHHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 3 256677778999999977653 677889888887764 77666664
No 91
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=81.60 E-value=9.7 Score=37.91 Aligned_cols=119 Identities=10% Similarity=0.095 Sum_probs=62.2
Q ss_pred hcccccCCCEEEEcCCC----------Ch----hHHHHHHHHHhc----cCCCceEEEEecCHHHHhcHHHHHh----c-
Q 010627 195 KWGIPNQIDMIALSFVR----------KG----SDLVGVRKLLGG----HAKNILLMSKVENQEGVANFDDILA----N- 251 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~----------sa----~dv~~v~~~l~~----~~~~~~IiakIEt~~av~nldeI~~----~- 251 (505)
+.+.+ |+|+|-+.|-. ++ +.++.+|+...+ .|.+.+|+.||=.-...+++.++++ .
T Consensus 160 ~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~G 238 (336)
T 1f76_A 160 EKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHN 238 (336)
T ss_dssp HHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcC
Confidence 44434 89998876621 11 344444544421 1446889999732111123333333 2
Q ss_pred CCeeEEecC-----cc-----cCcC----CchhHHHHHHHHHHHHH-Hc--CCCeEEehhhhHhhhcCCCCChHHHHHHH
Q 010627 252 SDAFMVARG-----DL-----GMEI----PIEKIFLAQKVMIYKCN-IQ--GKPVVTATQMLESMIKSPRPTRAEATDVA 314 (505)
Q Consensus 252 sDgImIaRg-----DL-----g~e~----~~~~v~~~qk~Ii~~~~-~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~ 314 (505)
+|+|.+.-+ ++ +.+. +....+ ..-..+...+ .. +.|+|.+..+- ...|+.
T Consensus 239 vd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~-~~~~~i~~i~~~~~~~ipVi~~GGI~------------~~~da~ 305 (336)
T 1f76_A 239 IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQL-KSTEIIRRLSLELNGRLPIIGVGGID------------SVIAAR 305 (336)
T ss_dssp CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHH-HHHHHHHHHHHHHTTSSCEEEESSCC------------SHHHHH
T ss_pred CcEEEEeCCcccccccccccccccCCCcCCchhHH-HHHHHHHHHHHHhCCCCCEEEECCCC------------CHHHHH
Confidence 599998422 21 0011 111122 2223333333 34 78998765433 345778
Q ss_pred HHHHcCCceeeec
Q 010627 315 NAVLDGTDCVMLS 327 (505)
Q Consensus 315 nav~~G~D~imLs 327 (505)
.++..|+|+|++.
T Consensus 306 ~~l~~GAd~V~ig 318 (336)
T 1f76_A 306 EKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHTCSEEEES
T ss_pred HHHHCCCCEEEee
Confidence 8888999999995
No 92
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=81.39 E-value=12 Score=35.47 Aligned_cols=109 Identities=11% Similarity=0.070 Sum_probs=66.2
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccC
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+..+...+.+.+++.|++.|=+.+ +++...+.++.+..+. .+..+-+-. .---+.++.-+++ +|++..+--|
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d--- 108 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT--- 108 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC---
T ss_pred CHHHHHHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC---
Confidence 334444444788889999998886 4555555555444433 344444432 2111333333333 6888754222
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
..+++.|+.+|.|.+..+ -|. +++..|...|+|.+.+
T Consensus 109 -----------~~v~~~~~~~g~~~i~G~-----------~t~---~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 -----------EDILEAGVDSEIPLLPGI-----------STP---SEIMMGYALGYRRFKL 145 (225)
T ss_dssp -----------HHHHHHHHHCSSCEECEE-----------CSH---HHHHHHHTTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEEee-----------CCH---HHHHHHHHCCCCEEEE
Confidence 368899999999987531 122 3457788999999998
No 93
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=81.11 E-value=5.5 Score=38.90 Aligned_cols=147 Identities=18% Similarity=0.158 Sum_probs=87.0
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh--------cCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA--------NSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--------~sDg 254 (505)
|..|+.|.+.+.+.+.+.|+..|+++ +..+..+++.|. +..++|.+=|=.|.|-...+.-+. -+|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 45688888777688889999999985 778889999884 456788887766655543333322 2343
Q ss_pred eEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeeccc
Q 010627 255 FMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPV--VTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 329 (505)
Q Consensus 255 ImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpv--i~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~E 329 (505)
|=+ ..|-|- +=.++.+..-.+.+.++|. |+|+ |+-|-.| |..|+..... +...|+|.|=-|.=
T Consensus 128 IDmViNig~lk-~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~L---------t~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 128 IDMVINVGMLK-AKEWEYVYEDIRSVVESVK--GKVVKVIIETCYL---------DTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHTT--TSEEEEECCGGGC---------CHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred EEEEeehhhhc-cccHHHHHHHHHHHHHhcC--CCcEEEEEeCCCC---------CHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 321 111110 0011233333344555543 4443 4444333 6677766665 66789999876621
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 010627 330 TAAGAYPEVAVRTMAQIC 347 (505)
Q Consensus 330 ta~G~yP~~~V~~m~~i~ 347 (505)
=..|---++.|+.|++.+
T Consensus 196 f~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 196 FGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 112233568899998865
No 94
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=81.04 E-value=5.2 Score=40.17 Aligned_cols=118 Identities=17% Similarity=0.258 Sum_probs=66.2
Q ss_pred ChhcHHHHHhcccccC--CCEEEEcCCC-Ch----hHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhc-CCeeE
Q 010627 186 TEKDKEDILKWGIPNQ--IDMIALSFVR-KG----SDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILAN-SDAFM 256 (505)
Q Consensus 186 te~D~~di~~~al~~g--~d~V~~sfV~-sa----~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-sDgIm 256 (505)
.+.+.+.+ +...+.| ++++.+..-. .. +.++++++.. ..+.++.. +-+++- .....++ +|+|.
T Consensus 104 ~~~~~~~a-~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~----~~~~vi~G~v~s~e~---A~~a~~aGad~Iv 175 (336)
T 1ypf_A 104 KEDEYEFV-QQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL----PESFVIAGNVGTPEA---VRELENAGADATK 175 (336)
T ss_dssp SHHHHHHH-HHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC----TTSEEEEEEECSHHH---HHHHHHHTCSEEE
T ss_pred CHHHHHHH-HHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC----CCCEEEECCcCCHHH---HHHHHHcCCCEEE
Confidence 34555666 6778888 9998764321 22 3344444332 23566665 655543 3333333 79999
Q ss_pred Eec--Cc-------ccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 257 VAR--GD-------LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 257 IaR--gD-------Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
++- |= .+...| .+ ....+.+.+.+.+.|+|.+.-+- -..|+..++..|+|++|+.
T Consensus 176 vs~hgG~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 176 VGIGPGKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp ECSSCSTTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEES
T ss_pred EecCCCceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeC
Confidence 931 10 111111 00 12233444445589999765543 3468899999999999994
No 95
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=80.99 E-value=13 Score=39.11 Aligned_cols=118 Identities=16% Similarity=0.198 Sum_probs=69.2
Q ss_pred HHHHHhcccccCCCEEEEcCCC-----ChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 190 KEDILKWGIPNQIDMIALSFVR-----KGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~-----sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
.+.+ .++++.|+|.|.+.+.. ..+.++++++.. .+..++++ +-+.+....+.+ .-+|+|.++-+-=+
T Consensus 239 ~~~a-~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~----p~~pvi~g~~~t~e~a~~l~~--~G~d~I~v~~~~G~ 311 (494)
T 1vrd_A 239 MERV-EKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADY----PDLPVVAGNVATPEGTEALIK--AGADAVKVGVGPGS 311 (494)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC----TTSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCST
T ss_pred HHHH-HHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHC----CCceEEeCCcCCHHHHHHHHH--cCCCEEEEcCCCCc
Confidence 4556 78899999999986543 223344444332 23555543 555554433332 23799999532101
Q ss_pred Cc-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 264 ME-------IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 264 ~e-------~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.. .+.+ -......+.+.++..+.|+|.+.-+- ...|+..++..|+|++++.
T Consensus 312 ~~~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 312 ICTTRVVAGVGVP-QLTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp TCHHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCcc-HHHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 00 1111 12334455566666799999765543 3468899999999999984
No 96
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=80.81 E-value=11 Score=35.14 Aligned_cols=105 Identities=13% Similarity=0.153 Sum_probs=64.8
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccCcC
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGMEI 266 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~e~ 266 (505)
.+...+.+.+++.|++.|=+.+ +++...+.++... + .+..+-+-. .---+.++.-+++ +|++..+-.|
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~~~-~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d----- 93 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITL-RTEKGLEALKALR-K--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL----- 93 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEC-SSTHHHHHHHHHT-T--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC-----
T ss_pred HHHHHHHHHHHHcCCCEEEEeC-CChHHHHHHHHHh-C--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC-----
Confidence 3444444778889999999986 5565555555433 3 344443432 1112444444433 6888765322
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 267 PIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 267 ~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
..+++.|+++|.|.+..+ -| .+++..|...|+|.+.+
T Consensus 94 ---------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 ---------EEVAALAQARGVPYLPGV-----------LT---PTEVERALALGLSALKF 130 (207)
T ss_dssp ---------HHHHHHHHHHTCCEEEEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred ---------HHHHHHHHHhCCCEEecC-----------CC---HHHHHHHHHCCCCEEEE
Confidence 257888999999987532 12 33457778899999988
No 97
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=80.62 E-value=9.5 Score=36.24 Aligned_cols=131 Identities=14% Similarity=0.074 Sum_probs=72.7
Q ss_pred HHHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCc--
Q 010627 190 KEDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGME-- 265 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e-- 265 (505)
.+++ ..+.+.|+|+|++-- ..+++.+.++.+.+++. .+.+++.+-|.+-...+.+ .-+|.|-+.--.+...
T Consensus 91 ~~~i-~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~~a~~--~Gad~Ig~~~~g~t~~~~ 165 (229)
T 3q58_A 91 LQDV-DALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNEGISCHQ--KGIEFIGTTLSGYTGPIT 165 (229)
T ss_dssp HHHH-HHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHHHHHHHH--TTCSEEECTTTTSSSSCC
T ss_pred HHHH-HHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHh--CCCCEEEecCccCCCCCc
Confidence 3455 556788999987643 34667777777777654 4677776655433322211 1268775421112111
Q ss_pred CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHH
Q 010627 266 IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQ 345 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~ 345 (505)
.....+. .-+++ ++.+.|++...- .-|. .|+..+...|+|++++. +++.+ |-...+.+.+
T Consensus 166 ~~~~~~~-li~~l----~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~~ 225 (229)
T 3q58_A 166 PVEPDLA-MVTQL----SHAGCRVIAEGR---------YNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFSH 225 (229)
T ss_dssp CSSCCHH-HHHHH----HTTTCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCHH-HHHHH----HHcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHHH
Confidence 1111221 12222 223899986433 3333 45666777899999995 55554 6665555443
No 98
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=80.15 E-value=7.2 Score=36.47 Aligned_cols=136 Identities=8% Similarity=0.049 Sum_probs=74.5
Q ss_pred HHHhcccccCCCEEEEcCC--CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEE---ecCcccCcC
Q 010627 192 DILKWGIPNQIDMIALSFV--RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMV---ARGDLGMEI 266 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV--~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImI---aRgDLg~e~ 266 (505)
.+ +.+.+.|+|+|.++.- .+ ++..++.+.+.+.| ..++.-+-...-.+.+.++...+|.|++ .+|--|...
T Consensus 83 ~v-~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 83 RV-PDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HH-HHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HH-HHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 44 5567889999988876 44 44455555565544 3444444211223445556666897754 244333334
Q ss_pred CchhHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHH
Q 010627 267 PIEKIFLAQKVMIYKCNI--QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMA 344 (505)
Q Consensus 267 ~~~~v~~~qk~Ii~~~~~--~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~ 344 (505)
....+.. .+++-+.+.+ ...|+++..-+ .|. .+..++..|+|++.++.--.....|.++++.+.
T Consensus 159 ~~~~~~~-i~~l~~~~~~~~~~~pi~v~GGI--------~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 IESQVKK-ISDLRKICAERGLNPWIEVDGGV--------GPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp CTTHHHH-HHHHHHHHHHHTCCCEEEEESSC--------CTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred cHHHHHH-HHHHHHHHHhcCCCceEEEECCC--------CHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 3322222 2233333322 25777654332 232 234455669999999765444557888888775
Q ss_pred H
Q 010627 345 Q 345 (505)
Q Consensus 345 ~ 345 (505)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 3
No 99
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=80.12 E-value=10 Score=35.76 Aligned_cols=119 Identities=11% Similarity=0.046 Sum_probs=66.5
Q ss_pred HHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeE-E-ec-CcccCcCC
Q 010627 191 EDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFM-V-AR-GDLGMEIP 267 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgIm-I-aR-gDLg~e~~ 267 (505)
+.+ +.+++.|+|+|.++.. ..++..++.+++++.|.+ ++.-+......+.+.++.+.+|+++ + .+ |-.|..-+
T Consensus 99 ~~~-~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~--~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 99 NFL-AEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIK--TVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHH-HHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCE--EEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHH-HHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCC--eEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 355 7778899999999854 457788888888776644 3334432233455667776778443 2 22 22232211
Q ss_pred chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 268 IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 268 ~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
. -+...+.+-+.+...+.|+++..-+ -+ ..++..+...|+|++.+.
T Consensus 175 ~--~~~~~~~i~~l~~~~~~pi~~~GGI---------~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 I--PKTAYDLLRRAKRICRNKVAVGFGV---------SK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--CHHHHHHHHHHHHHCSSCEEEESCC---------CS---HHHHHHHHHTTCSEEEEC
T ss_pred C--ChhHHHHHHHHHhhcCCCEEEEeec---------CC---HHHHHHHHHcCCCEEEEc
Confidence 1 1222223333333447898865432 12 245566667899999984
No 100
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=80.04 E-value=1.9 Score=40.43 Aligned_cols=132 Identities=9% Similarity=0.037 Sum_probs=73.8
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceE-EEEecCHHHHhcHHHHHh-cCCeeEEecCcc----cCcCCc
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILL-MSKVENQEGVANFDDILA-NSDAFMVARGDL----GMEIPI 268 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~I-iakIEt~~av~nldeI~~-~sDgImIaRgDL----g~e~~~ 268 (505)
+.+.+.|+|+|.++-....+.++++.+.+++.|....+ +.-.-|++ .+.++.+ -.|.+.+.+|-. |..+..
T Consensus 77 ~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 153 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGWTT 153 (218)
T ss_dssp HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred HHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCcCCH
Confidence 44577899999998776666678888888776654332 32334653 3444444 367665544322 222222
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 269 EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 269 ~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
+.+..+.+ . +..+.|+.+...+ .|.. +..++..|+|++....--.....|.+++ .+.+..+
T Consensus 154 ~~l~~i~~----~-~~~~~pi~v~GGI--------~~~~-----~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 154 DDLDKMRQ----L-SALGIELSITGGI--------VPED-----IYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp HHHHHHHH----H-HHTTCEEEEESSC--------CGGG-----GGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHH----H-hCCCCCEEEECCC--------CHHH-----HHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 33332222 2 2246776653322 1222 2347778999999964433345688877 6666554
No 101
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=79.14 E-value=9.8 Score=34.74 Aligned_cols=126 Identities=12% Similarity=0.085 Sum_probs=68.2
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecC-cc-----cCcCCc
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARG-DL-----GMEIPI 268 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRg-DL-----g~e~~~ 268 (505)
+.+.+.|+|+|.++.-.- ++..++++. ..+.+..-+.|++.+... ...-+|.+++... += +...++
T Consensus 80 ~~a~~~gad~v~l~~~~~--~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~~ 151 (215)
T 1xi3_A 80 DVALAVDADGVQLGPEDM--PIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIGL 151 (215)
T ss_dssp HHHHHHTCSEEEECTTSC--CHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCHH
T ss_pred HHHHHcCCCEEEECCccC--CHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcCH
Confidence 345677999998874321 244455443 234444456666544322 1223799998541 10 112222
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 269 EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 269 ~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
+.+. + .++...+|++.+.-+ .| . ++..+...|+|++.++.--...+.|.+.++.+.+.++
T Consensus 152 ~~l~----~---l~~~~~~pvia~GGI--------~~--~---nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 152 EGLR----K---IVESVKIPVVAIGGI--------NK--D---NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HHHH----H---HHHHCSSCEEEESSC--------CT--T---THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHH----H---HHHhCCCCEEEECCc--------CH--H---HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 2222 2 223348898876432 12 2 4455666899999987544344567777777766554
No 102
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=79.08 E-value=29 Score=34.81 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=92.2
Q ss_pred CCChhcHHHHHhcccccCCCEEEE-----cCCCC-------hhHHHHHHHHHhccCCCceEEEEe-cCHHHHhcHHHHHh
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIAL-----SFVRK-------GSDLVGVRKLLGGHAKNILLMSKV-ENQEGVANFDDILA 250 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~-----sfV~s-------a~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~ 250 (505)
.++..++..|.+...+.|+|.|=+ ++..| +.+.+.++.+.. ...++++.+.. =+..-.+.++...+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Confidence 457777777756667789999998 34332 445555555443 34567777762 21101223444333
Q ss_pred c-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 251 N-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 251 ~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
. .|++.|. + +..++ ...+..++.|+++|+.+...- ...+.-+...+.+++. +...|+|.|.|.
T Consensus 105 aGvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~~------~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~- 169 (345)
T 1nvm_A 105 AGARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGFL------MMSHMIPAEKLAEQGKLMESYGATCIYMA- 169 (345)
T ss_dssp HTCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEEE------ESTTSSCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred CCcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEEE------EeCCCCCHHHHHHHHHHHHHCCCCEEEEC-
Confidence 3 5888774 1 22111 234677889999999987641 1234445566777776 455689999995
Q ss_pred cCCCCCCHHHHHHHHHHHHHHH
Q 010627 329 ETAAGAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~a 350 (505)
+|.=...|-++-+.+..+.+..
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHS
T ss_pred CCcCccCHHHHHHHHHHHHHhc
Confidence 4444446988888888776654
No 103
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=78.79 E-value=2.7 Score=39.74 Aligned_cols=129 Identities=8% Similarity=0.025 Sum_probs=64.8
Q ss_pred cHHHHHhcccccCCCEEEE-----cCCCChhHHHHHHHHHhccCCCceEEEE--ecCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 189 DKEDILKWGIPNQIDMIAL-----SFVRKGSDLVGVRKLLGGHAKNILLMSK--VENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~-----sfV~sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-sDgImIaRg 260 (505)
|...+.+...+.|+|++.+ .|...... ..++++.+.. +++++.. |.+++- +++.++. +|+|.+++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~---~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDT---LAAALATGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHH---HHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHHH---HHHHHHcCCCEEEECch
Confidence 4444446677899999987 34455544 4444433322 4566664 677653 5555555 799999876
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhH-h-hhcCC---CCChHHHHHHHHHHHcCCceeeecccCCCCCC
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLE-S-MIKSP---RPTRAEATDVANAVLDGTDCVMLSGETAAGAY 335 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLe-S-M~~~~---~ptraEv~Dv~nav~~G~D~imLs~Eta~G~y 335 (505)
.|.- |. .+.+..+..|..++++-.... . .++.- .++..| .+..+...|+|.+.+++-+..|.+
T Consensus 107 ~l~~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 107 ALET-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp HHHC-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC------
T ss_pred HhhC-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCccccc
Confidence 6532 12 233333444533433322110 0 00100 112223 234556689999998766555543
No 104
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=78.58 E-value=13 Score=36.44 Aligned_cols=127 Identities=11% Similarity=-0.025 Sum_probs=69.7
Q ss_pred hhcHHHHHhcccccCCC-EEEEcCC-----------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc---
Q 010627 187 EKDKEDILKWGIPNQID-MIALSFV-----------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN--- 251 (505)
Q Consensus 187 e~D~~di~~~al~~g~d-~V~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--- 251 (505)
..|.....+.+.+.|+| +|-+.+- .+++.+.++-+.+++. .+.+++.|+=---..+++.++++.
T Consensus 105 ~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 105 AAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 34444444777788999 9988652 2555555555555543 257899998421112233333332
Q ss_pred --CCeeEEecCc---ccCc-------C----------CchhHHHHHHHHHHHHHH-c--CCCeEEehhhhHhhhcCCCCC
Q 010627 252 --SDAFMVARGD---LGME-------I----------PIEKIFLAQKVMIYKCNI-Q--GKPVVTATQMLESMIKSPRPT 306 (505)
Q Consensus 252 --sDgImIaRgD---Lg~e-------~----------~~~~v~~~qk~Ii~~~~~-~--gkpvi~ATqmLeSM~~~~~pt 306 (505)
+|+|.+.-.- +..+ + +....+... ..+...++ . ..|+|...-+-
T Consensus 184 ~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~GGI~---------- 252 (311)
T 1jub_A 184 FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGTGGIE---------- 252 (311)
T ss_dssp SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEESSCC----------
T ss_pred cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEECCCC----------
Confidence 4888773110 0011 0 111123333 34444444 4 68888755432
Q ss_pred hHHHHHHHHHHHcCCceeeec
Q 010627 307 RAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 307 raEv~Dv~nav~~G~D~imLs 327 (505)
...|+..++..|+|++++.
T Consensus 253 --~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 253 --TGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp --SHHHHHHHHHHTCSEEEEC
T ss_pred --CHHHHHHHHHcCCCEEEEc
Confidence 2356677778899999995
No 105
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=77.71 E-value=11 Score=38.41 Aligned_cols=96 Identities=17% Similarity=0.233 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 213 GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 213 a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
.++.+.++++.++.| +.+++-.=..++++-+ .+. .|.+=||-+|+. .+| +++.+.+.|||+|+
T Consensus 77 ~e~~~~L~~~~~~~G--i~~~st~fD~~svd~l---~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPviL 140 (350)
T 3g8r_A 77 PEQMQKLVAEMKANG--FKAICTPFDEESVDLI---EAHGIEIIKIASCSFT------DWP-----LLERIARSDKPVVA 140 (350)
T ss_dssp HHHHHHHHHHHHHTT--CEEEEEECSHHHHHHH---HHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHHHcC--CcEEeccCCHHHHHHH---HHcCCCEEEECccccc------CHH-----HHHHHHhhCCcEEE
Confidence 355666666665443 5566644444454433 444 799999988874 333 34556678999999
Q ss_pred ehhhhHhhhcCCCCChHHHHHHHHHHHc-CCceeeecccCCCCCCH
Q 010627 292 ATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLSGETAAGAYP 336 (505)
Q Consensus 292 ATqmLeSM~~~~~ptraEv~Dv~nav~~-G~D~imLs~Eta~G~yP 336 (505)
.|-| -|-.|+...++++.. |.+-++|--++. ||
T Consensus 141 stGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 141 STAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp ECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred ECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 9985 267899888887765 677666655543 66
No 106
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=77.63 E-value=8.6 Score=37.66 Aligned_cols=114 Identities=11% Similarity=0.117 Sum_probs=68.7
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCC-ceEEEEecCHHHHhcHHHHHhcCCeeEE--ec-CcccCcCCchh
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKN-ILLMSKVENQEGVANFDDILANSDAFMV--AR-GDLGMEIPIEK 270 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~-~~IiakIEt~~av~nldeI~~~sDgImI--aR-gDLg~e~~~~~ 270 (505)
+.+.+.|+|++++|=.-- ++..++++.+++.|-+ +.+++ -.| ..+.+.+|.+.++|.+- .+ |==|..- .
T Consensus 119 ~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~I~lva-p~t--~~eri~~i~~~~~gfiY~vs~~GvTG~~~---~ 191 (271)
T 3nav_A 119 QRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQPIFIAP-PTA--SDETLRAVAQLGKGYTYLLSRAGVTGAET---K 191 (271)
T ss_dssp HHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEEEEEC-TTC--CHHHHHHHHHHCCSCEEECCCC-----------
T ss_pred HHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeEEEEEC-CCC--CHHHHHHHHHHCCCeEEEEeccCCCCccc---C
Confidence 666888999999986543 5678888888877754 22332 122 34788999998866543 22 2122221 1
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 271 IFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 271 v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
++.-....++..+++ ..|+++..- .-|. .++..++..|+|++...
T Consensus 192 ~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 192 ANMPVHALLERLQQFDAPPALLGFG---------ISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEES
T ss_pred CchhHHHHHHHHHHhcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 222344555555554 689987543 2222 34566888999999984
No 107
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=77.42 E-value=25 Score=36.85 Aligned_cols=124 Identities=17% Similarity=0.183 Sum_probs=72.6
Q ss_pred hcHHHHHhcccccCCCEEEEcCCC-ChhHHHHHHHHHhccCCCce-EEEEecCHHHHhcHHHHHhcCCeeEEecCc--cc
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVR-KGSDLVGVRKLLGGHAKNIL-LMSKVENQEGVANFDDILANSDAFMVARGD--LG 263 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~-sa~dv~~v~~~l~~~~~~~~-IiakIEt~~av~nldeI~~~sDgImIaRgD--Lg 263 (505)
...+.+ +++.+.|+|.|.+.... ..+...+.-..+.+.-..+. +...+-+.+....+.+ .-+|+|.++-|- ..
T Consensus 233 ~~~~~a-~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~--~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 233 DTFERA-EALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYD--AGVDVVKVGIGPGSIC 309 (491)
T ss_dssp THHHHH-HHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTTB
T ss_pred hHHHHH-HHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHH--cCCCEEEECccCCcce
Confidence 445667 78889999999987632 12222222222222212333 3445666655543322 347999997431 00
Q ss_pred C-----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 264 M-----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 264 ~-----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
. ..+. ......+.+...+...+.|+|...-+- -..|+..++..|+|++++.
T Consensus 310 ~tr~~~~~~~-p~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 310 TTRVVAGVGV-PQVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp CHHHHTCCCC-CHHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred EEeeecCCCC-CcHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeC
Confidence 0 0111 133445677778888899998755432 2468899999999999994
No 108
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=77.39 E-value=7.4 Score=38.04 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=68.8
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCC-ceEEEEecCHHHHhcHHHHHhcCCeeEEe---cCcccCcCCchh
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKN-ILLMSKVENQEGVANFDDILANSDAFMVA---RGDLGMEIPIEK 270 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~-~~IiakIEt~~av~nldeI~~~sDgImIa---RgDLg~e~~~~~ 270 (505)
+.+.+.|+|++++|-.- .++..++++.+++.|-+ +.+++ =.| ..+.+..|++.++|.+-. .|=-|..- .
T Consensus 117 ~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~lia-P~t--~~eri~~i~~~~~gfvY~vS~~GvTG~~~---~ 189 (267)
T 3vnd_A 117 TKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAP-PNA--DADTLKMVSEQGEGYTYLLSRAGVTGTES---K 189 (267)
T ss_dssp HHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEEC-TTC--CHHHHHHHHHHCCSCEEESCCCCCC--------
T ss_pred HHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEEC-CCC--CHHHHHHHHHhCCCcEEEEecCCCCCCcc---C
Confidence 66678899999998654 46788888888887754 22332 122 357899999998765433 22223221 1
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 271 IFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 271 v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
++.-....++..+++ ..|+++..- .-|. .++..++..|+|+++..
T Consensus 190 ~~~~~~~~v~~vr~~~~~pv~vGfG---------I~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 190 AGEPIENILTQLAEFNAPPPLLGFG---------IAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp ---CHHHHHHHHHTTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred CcHHHHHHHHHHHHhcCCCEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 222234555555554 679987543 2222 34455788899999984
No 109
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=77.29 E-value=72 Score=33.12 Aligned_cols=155 Identities=12% Similarity=0.061 Sum_probs=97.0
Q ss_pred CCChhcHHHHHhcccccCCCEEEEc-CCCChhHHHHHHHHHhccCCCceEEEEe-cCHHHHhcHHHHHh-cCC--eeEEe
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALS-FVRKGSDLVGVRKLLGGHAKNILLMSKV-ENQEGVANFDDILA-NSD--AFMVA 258 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~-~sD--gImIa 258 (505)
.++..++..|.+...+.|+|.|=+. ...++.+...++.+.. .+.+..+.+.+ .+.++++. -++ -.| .++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~-~~~~~~v~~~~r~~~~di~~---A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICK-LGLKCKILTHIRCHMDDARV---AVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT-SCCSSEEEEEEESCHHHHHH---HHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHh-cCCCCEEEEeeccChhhHHH---HHHcCCCEEEEEee
Confidence 4577888888677777899999884 4667777777776553 45555665532 34444332 222 245 34445
Q ss_pred cCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCCCC
Q 010627 259 RGDLGM----EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETAAG 333 (505)
Q Consensus 259 RgDLg~----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta~G 333 (505)
-.|+-. ....+++.......++.|+++|..|.+... ...+.+...+.+++. +...|+|.|.| .+|.=.
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~v~~~~~~~Ga~~i~l-~DTvG~ 205 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVDKIGVNRVGI-ADTVGC 205 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHHHHCCSEEEE-EETTSC
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHHHHHHHHHhCCCcccc-CCccCc
Confidence 555432 223456666677899999999999876422 222344555666666 45679999999 688888
Q ss_pred CCHHHHHHHHHHHHHH
Q 010627 334 AYPEVAVRTMAQICVE 349 (505)
Q Consensus 334 ~yP~~~V~~m~~i~~~ 349 (505)
-.|-++-+.++.+...
T Consensus 206 ~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 206 ATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8899888887776643
No 110
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=77.22 E-value=22 Score=33.33 Aligned_cols=109 Identities=6% Similarity=0.076 Sum_probs=67.7
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccC
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+..+...+.+.+++.|++.|=+.+ +++...+.++++..+. .+..+-+-. .---+.++.-+++ +|++..+--|
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d--- 98 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT--- 98 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC---
Confidence 344444444888899999999996 5565555555544443 244444421 1111344443433 7999865322
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
..+++.|+++|.|.+..+ -| .+++..|...|+|.+.+
T Consensus 99 -----------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -----------EPLLKAATEGTIPLIPGI-----------ST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -----------HHHHHHHHHSSSCEEEEE-----------SS---HHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEEec-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368899999999987532 12 33457788899999998
No 111
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=76.86 E-value=21 Score=37.56 Aligned_cols=119 Identities=15% Similarity=0.195 Sum_probs=71.4
Q ss_pred HHHHHhcccccCCCEEEEcCC--CChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcCCeeEEecCcccCc-
Q 010627 190 KEDILKWGIPNQIDMIALSFV--RKGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANSDAFMVARGDLGME- 265 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV--~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~sDgImIaRgDLg~e- 265 (505)
.+.+ .+.++.|+|.+.+.-. .+..-+..++. +...- .+++++| +-++++...+. -+|+|.+|.|-=+..
T Consensus 230 ~~~a-~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~ 302 (486)
T 2cu0_A 230 IKRA-IELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICT 302 (486)
T ss_dssp HHHH-HHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBC
T ss_pred HHHH-HHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeecccee
Confidence 4455 6778899998776532 22333444443 32222 5677774 77887776655 689999955431111
Q ss_pred ------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 266 ------IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 266 ------~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
.+... ......+.+.+.+.+.|||.+.-+. --.|++.|+..|||++|+..
T Consensus 303 ~r~~~~~g~~~-~~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 303 TRIVAGVGVPQ-ITAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp HHHHTCCCCCH-HHHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred eeEEeecCcch-HHHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeCh
Confidence 11111 1233344445566689998765433 24688999999999999953
No 112
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=76.49 E-value=33 Score=32.70 Aligned_cols=132 Identities=14% Similarity=0.063 Sum_probs=75.7
Q ss_pred HHHhcccccCCCEE--EE-cCCCCh----hHHHHHHHHHhccCCCceEEEEe----------cCHHHHhcHHHHHhc---
Q 010627 192 DILKWGIPNQIDMI--AL-SFVRKG----SDLVGVRKLLGGHAKNILLMSKV----------ENQEGVANFDDILAN--- 251 (505)
Q Consensus 192 di~~~al~~g~d~V--~~-sfV~sa----~dv~~v~~~l~~~~~~~~IiakI----------Et~~av~nldeI~~~--- 251 (505)
.+ +.+++.|+|.| .+ ....+. +++.++.+.+++.| ++++..+ -+. +++++.+..
T Consensus 104 ~v-~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~~G~~l~~~~~~---~~~~~~a~~a~~ 177 (273)
T 2qjg_A 104 TV-EEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYPRGKHIQNERDP---ELVAHAARLGAE 177 (273)
T ss_dssp CH-HHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEECSTTCSCTTCH---HHHHHHHHHHHH
T ss_pred HH-HHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCCCCcccCCCCCH---hHHHHHHHHHHH
Confidence 45 66788999999 32 222222 24556666665544 4455544 222 233333221
Q ss_pred --CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC-ChHHHHH-HHHHHHcCCceeeec
Q 010627 252 --SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRP-TRAEATD-VANAVLDGTDCVMLS 327 (505)
Q Consensus 252 --sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~p-traEv~D-v~nav~~G~D~imLs 327 (505)
+|.|-++.+ .+++. +-+.+...+.|++.+.-+ .+ +..+... +..++..|+|+++..
T Consensus 178 ~Gad~i~~~~~-----~~~~~-------l~~i~~~~~ipvva~GGi--------~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 178 LGADIVKTSYT-----GDIDS-------FRDVVKGCPAPVVVAGGP--------KTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp TTCSEEEECCC-----SSHHH-------HHHHHHHCSSCEEEECCS--------CCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred cCCCEEEECCC-----CCHHH-------HHHHHHhCCCCEEEEeCC--------CCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 588888731 22222 222333457998865331 22 2333333 666777899999997
Q ss_pred ccCCCCCCHHHHHHHHHHHHHH
Q 010627 328 GETAAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 328 ~Eta~G~yP~~~V~~m~~i~~~ 349 (505)
..-.....|.++++.+.+++.+
T Consensus 238 ~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 238 RNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHHHHHhc
Confidence 6666667899988888877653
No 113
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=76.17 E-value=10 Score=38.79 Aligned_cols=114 Identities=15% Similarity=0.213 Sum_probs=61.9
Q ss_pred hcccccCCCEEEEc-------CCC---ChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 195 KWGIPNQIDMIALS-------FVR---KGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 195 ~~al~~g~d~V~~s-------fV~---sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
+...+.|+|++.+. +.. +.+++.++++.. +++++++ |-|++....+.+ .-+|+|+|++|--+
T Consensus 172 ~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-----~~pvi~ggi~t~e~a~~~~~--~Gad~i~vg~Gg~~ 244 (393)
T 2qr6_A 172 PIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-----DVPVIAGGVNDYTTALHMMR--TGAVGIIVGGGENT 244 (393)
T ss_dssp HHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-----SSCEEEECCCSHHHHHHHHT--TTCSEEEESCCSCC
T ss_pred HHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-----CCCEEECCcCCHHHHHHHHH--cCCCEEEECCCccc
Confidence 34456799988765 222 335566555543 4677775 555544332222 22799999874321
Q ss_pred Cc----CCchhHHHHHHHHHHHH----HHcC---CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 264 ME----IPIEKIFLAQKVMIYKC----NIQG---KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 264 ~e----~~~~~v~~~qk~Ii~~~----~~~g---kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
.. .+.. .......+.+++ .+.+ .|+|.+.-+- --.|+..++..|+|++++..
T Consensus 245 ~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 245 NSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp HHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEECG
T ss_pred ccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 10 1111 111222233332 2245 8888765433 24688999999999999953
No 114
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=75.98 E-value=25 Score=35.71 Aligned_cols=119 Identities=13% Similarity=0.245 Sum_probs=83.8
Q ss_pred HHHHHhcccccCCCEEEEc--------------CC----------------CChhHHHHHHHHHhccCCCceEEEEecCH
Q 010627 190 KEDILKWGIPNQIDMIALS--------------FV----------------RKGSDLVGVRKLLGGHAKNILLMSKVENQ 239 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s--------------fV----------------~sa~dv~~v~~~l~~~~~~~~IiakIEt~ 239 (505)
++.+ +.|.++|+|.|=+- |- -+.++.+.++++.++.| +.+++-+=+.
T Consensus 38 ~~li-~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~G--i~~~st~~d~ 114 (349)
T 2wqp_A 38 FEMV-DAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKG--MIFISTLFSR 114 (349)
T ss_dssp HHHH-HHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTT--CEEEEEECSH
T ss_pred HHHH-HHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhC--CeEEEeeCCH
Confidence 3444 77888999988652 32 14467777788877654 7888877777
Q ss_pred HHHhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH
Q 010627 240 EGVANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVL 318 (505)
Q Consensus 240 ~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~ 318 (505)
++++-+++ . .|.+=||-+|+.. ++ +++++.+.|||||+.|-| -|-+|+...++++.
T Consensus 115 ~svd~l~~---~~v~~~KI~S~~~~n------~~-----LL~~va~~gkPviLstGm---------at~~Ei~~Ave~i~ 171 (349)
T 2wqp_A 115 AAALRLQR---MDIPAYKIGSGECNN------YP-----LIKLVASFGKPIILSTGM---------NSIESIKKSVEIIR 171 (349)
T ss_dssp HHHHHHHH---HTCSCEEECGGGTTC------HH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHH
T ss_pred HHHHHHHh---cCCCEEEECcccccC------HH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHH
Confidence 77766555 4 6999999888852 33 356666789999999885 25689988888776
Q ss_pred -cCCceeeecccCCCCCCHH
Q 010627 319 -DGTDCVMLSGETAAGAYPE 337 (505)
Q Consensus 319 -~G~D~imLs~Eta~G~yP~ 337 (505)
.|.+-++|- -+-.||.
T Consensus 172 ~~G~~iiLlh---c~s~Yp~ 188 (349)
T 2wqp_A 172 EAGVPYALLH---CTNIYPT 188 (349)
T ss_dssp HHTCCEEEEE---CCCCSSC
T ss_pred HcCCCEEEEe---ccCCCCC
Confidence 467777773 2345775
No 115
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=75.96 E-value=18 Score=38.24 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=71.1
Q ss_pred hcccccCCCEEEEcCC--CChhHHHHHHHHHhccCCC-ceE-EEEecCHHHHhcHHHHHhcCCeeEEecCcccC------
Q 010627 195 KWGIPNQIDMIALSFV--RKGSDLVGVRKLLGGHAKN-ILL-MSKVENQEGVANFDDILANSDAFMVARGDLGM------ 264 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV--~sa~dv~~v~~~l~~~~~~-~~I-iakIEt~~av~nldeI~~~sDgImIaRgDLg~------ 264 (505)
+...+.|++.+.+..- .+...+..+ +.+.+...+ +.+ +.-+.+++..+.+.+ .-+|++.++.|-=+.
T Consensus 248 ~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~~~~~r~~ 324 (503)
T 1me8_A 248 PALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSICITREQ 324 (503)
T ss_dssp HHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTCCSTTT
T ss_pred HHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHH--hCCCeEEecccCCcCcccccc
Confidence 6667889998877322 222222222 333332222 444 456888877765543 247999986533111
Q ss_pred -cCCchhHHHHHHHHHHHHHHc------CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 265 -EIPIEKIFLAQKVMIYKCNIQ------GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 265 -e~~~~~v~~~qk~Ii~~~~~~------gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
..+.+ -..+...+.++|+.. +.|+|.+.-+. --.|++.|+..|||++|+.
T Consensus 325 ~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------------~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 325 KGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV------------YDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp TCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11222 234556777778777 89999766544 2478999999999999995
No 116
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=75.09 E-value=19 Score=35.33 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 213 GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 213 a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.+..+.+++++.+.| +.+++-+-.+..++-+.+. .|.+-||-+++.- ..+++++.+.||||++.
T Consensus 88 ~~gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~n-----------~~ll~~~a~~~kPV~lk 151 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAG--LPVVTEVLDPRHVETVSRY---ADMLQIGARNMQN-----------FPLLREVGRSGKPVLLK 151 (276)
T ss_dssp HHHHHHHHHHHHHHT--CCEEEECCCGGGHHHHHHH---CSEEEECGGGTTC-----------HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHcC--CcEEEecCCHHHHHHHHHh---CCeEEECcccccC-----------HHHHHHHHccCCeEEEc
Confidence 567788888877654 7888988877777666554 7999999776642 23455555789999997
Q ss_pred hhhhHhhhcCCCCChHHHHHHHHHHH-cCCceeeec--ccCCCCCCHHHHHHH
Q 010627 293 TQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLS--GETAAGAYPEVAVRT 342 (505)
Q Consensus 293 TqmLeSM~~~~~ptraEv~Dv~nav~-~G~D~imLs--~Eta~G~yP~~~V~~ 342 (505)
|.|- .|-.|+....+++. .|.+-++|. +=+..-.||.+.+..
T Consensus 152 ~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl 196 (276)
T 1vs1_A 152 RGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDV 196 (276)
T ss_dssp CCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBH
T ss_pred CCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCH
Confidence 6543 46788888777664 476444442 333333466554443
No 117
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=74.81 E-value=8 Score=36.53 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=66.0
Q ss_pred HHHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCCc--eEEEE-------ecCH--------HHHhcHHHHHh
Q 010627 190 KEDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKNI--LLMSK-------VENQ--------EGVANFDDILA 250 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~~--~Iiak-------IEt~--------~av~nldeI~~ 250 (505)
.+++ +.+++.|+|+|.+.- ..+++.+.++.+.++. ..+ .+=++ +++. ..++.+.++.+
T Consensus 86 ~~~~-~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 86 FETA-SELILRGADKVSINTAAVENPSLITQIAQTFGS--QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp HHHH-HHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHH-HHHHHcCCCEEEEChHHHhChHHHHHHHHHcCC--CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 4456 666788999998864 2344445555554421 111 11121 2211 12334455555
Q ss_pred c-CCeeEEe-cC-cccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 251 N-SDAFMVA-RG-DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 251 ~-sDgImIa-Rg-DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
. +|.|++- +. |. ...+. .+. ..+++ +...+.|++...- .-+.+ |+..+...|+|+++..
T Consensus 163 ~G~~~i~~~~~~~~g-~~~g~-~~~-~~~~l---~~~~~ipvia~GG---------I~~~~---d~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 163 RGAGEILLTSIDRDG-TKSGY-DTE-MIRFV---RPLTTLPIIASGG---------AGKME---HFLEAFLAGADAALAA 224 (253)
T ss_dssp TTCSEEEEEETTTTT-SCSCC-CHH-HHHHH---GGGCCSCEEEESC---------CCSHH---HHHHHHHTTCSEEEES
T ss_pred CCCCEEEEEeccCCC-CCCCC-CHH-HHHHH---HHhcCCCEEEECC---------CCCHH---HHHHHHHcCChHHHHH
Confidence 5 5888873 21 21 11221 111 11222 2345899987443 33334 4445556799999985
Q ss_pred ccCCCCC-CHHHHHHHH
Q 010627 328 GETAAGA-YPEVAVRTM 343 (505)
Q Consensus 328 ~Eta~G~-yP~~~V~~m 343 (505)
.---.+. -|.++++.+
T Consensus 225 sal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 225 SVFHFREIDVRELKEYL 241 (253)
T ss_dssp HHHHTTCSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 3322333 455666654
No 118
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=74.73 E-value=38 Score=32.00 Aligned_cols=128 Identities=11% Similarity=0.062 Sum_probs=74.4
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe-------cC----HHHHhcHHHHHhc-----
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV-------EN----QEGVANFDDILAN----- 251 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI-------Et----~~av~nldeI~~~----- 251 (505)
.+..+..+++.++|+|+|=+......+++.++++.+.+.|-.+..+.-- .. .++++.+...++.
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG 117 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELG 117 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4554544888999999999988877889999999998776544322210 01 2345555555543
Q ss_pred CCeeEEecCc--ccCcCC-----chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHH
Q 010627 252 SDAFMVARGD--LGMEIP-----IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAV 317 (505)
Q Consensus 252 sDgImIaRgD--Lg~e~~-----~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav 317 (505)
++.|.+..|. ..-..| ++.+...-+++.+.|.++|..+.+=+ +..+..+...|-.++.++...+
T Consensus 118 a~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 118 STGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEP--LNRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp CSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECC--CCTTTCSSCCCHHHHHHHHHHH
T ss_pred CCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe--cCcccCcccCCHHHHHHHHHHc
Confidence 3566665442 211111 23445555777888888887766411 1111122344566666666554
No 119
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=74.17 E-value=6.7 Score=38.72 Aligned_cols=151 Identities=10% Similarity=0.034 Sum_probs=88.8
Q ss_pred CCCChhcHHHHHhccccc--CCCEEEEcCCCChhHHHHHHHHHhccCC--CceEEEEecCHHHHhcHHHHH--------h
Q 010627 183 PTLTEKDKEDILKWGIPN--QIDMIALSFVRKGSDLVGVRKLLGGHAK--NILLMSKVENQEGVANFDDIL--------A 250 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~--g~d~V~~sfV~sa~dv~~v~~~l~~~~~--~~~IiakIEt~~av~nldeI~--------~ 250 (505)
|.-|+.|.+.+.+.+.+. |++.|+++ +..+..+++.|...+. .++|.+-|=-|.|-...+..+ .
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 556888888877888888 99999886 6778888888863233 678888885555443333222 2
Q ss_pred cCCeeEE--ecCcccCcCCchhHH---HHHHHHHHHHHHc-CCC--eEEehhhhHhhhcCCCCChHH-HHHHH-HHHHcC
Q 010627 251 NSDAFMV--ARGDLGMEIPIEKIF---LAQKVMIYKCNIQ-GKP--VVTATQMLESMIKSPRPTRAE-ATDVA-NAVLDG 320 (505)
Q Consensus 251 ~sDgImI--aRgDLg~e~~~~~v~---~~qk~Ii~~~~~~-gkp--vi~ATqmLeSM~~~~~ptraE-v~Dv~-nav~~G 320 (505)
-+|.|=+ ..|-|- -.+.. .+.+.|-+...+. ++| ||+.|-.| +..| +.... -++..|
T Consensus 119 GAdEIDmVinig~lk----sg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~eaG 185 (281)
T 2a4a_A 119 GADEIDLVINYKKII----ENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLNGN 185 (281)
T ss_dssp TCSEEEEECCHHHHH----HSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHTTT
T ss_pred CCCEEEEecchHhhh----CCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhC
Confidence 2454422 222110 01222 3333333333322 456 38888777 4456 33333 377889
Q ss_pred CceeeecccCCCCCCHHHHHHHHHHHHHHH
Q 010627 321 TDCVMLSGETAAGAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 321 ~D~imLs~Eta~G~yP~~~V~~m~~i~~~a 350 (505)
+|.|=-|.-=..|.--++.|+.|++.+++.
T Consensus 186 ADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 186 ADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp CSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 999865521111233468999999988765
No 120
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=74.16 E-value=11 Score=34.44 Aligned_cols=108 Identities=12% Similarity=0.137 Sum_probs=64.6
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCC-Ch-hHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHH-hcCCeeEEecCc
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVR-KG-SDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDIL-ANSDAFMVARGD 261 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~-sa-~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~-~~sDgImIaRgD 261 (505)
+..+...+.+...+.|+++|-+.+-. .+ +.++++|+.+. .+..|-+ .+.+++-+ ++-. .-+|.+ ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~~---~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQC---RKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHHH---HHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHHH---HHHHHcCCCEE-EcCCC
Confidence 33444444366677899999775432 22 23566666552 2333433 44565433 2222 337999 77651
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
+ ..+++.|+++|+|++.- ..|.. ++..+...|+|.+-+.
T Consensus 93 -----~--------~~~~~~~~~~g~~vi~g-----------~~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 -----D--------EEISQFCKEKGVFYMPG-----------VMTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -----C--------HHHHHHHHHHTCEEECE-----------ECSHH---HHHHHHHTTCCEEEET
T ss_pred -----C--------HHHHHHHHHcCCcEECC-----------cCCHH---HHHHHHHcCCCEEEEc
Confidence 1 35888999999999852 12333 4667889999998764
No 121
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=73.26 E-value=11 Score=36.15 Aligned_cols=152 Identities=13% Similarity=0.035 Sum_probs=90.2
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh--------cCCe
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA--------NSDA 254 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--------~sDg 254 (505)
|..|+.|.+.+.+.+.+.|+..|+++ +..+..++ .|. +..++|.+=|=-|.|-...+.-+. -+|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~--~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA--PSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC--CTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66788888877688889999999985 77788888 774 456777777755555443332221 1343
Q ss_pred eEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCC
Q 010627 255 FMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETA 331 (505)
Q Consensus 255 ImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta 331 (505)
|=+ ..|-|- +=.++.+..-.+.+.++|...-..||+-|-.|+. ..|..|+..... +...|+|.|=-|.==.
T Consensus 97 IDmVinig~lk-~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 97 IDMVIDVGAAL-AGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred EEEEeehHhhh-cccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 321 111110 0011233344455555664222335777777732 247788877766 6678999986542111
Q ss_pred -CCCCHHHHHHHHHHHH
Q 010627 332 -AGAYPEVAVRTMAQIC 347 (505)
Q Consensus 332 -~G~yP~~~V~~m~~i~ 347 (505)
.|---++.|+.|++.+
T Consensus 171 ~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 171 PSGGASVQAVEIMARTV 187 (231)
T ss_dssp TTCSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 1222368999998875
No 122
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=73.20 E-value=11 Score=35.39 Aligned_cols=134 Identities=13% Similarity=0.136 Sum_probs=68.2
Q ss_pred HHHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCCceEE--E-------EecCH--------HHHhcHHHHHh
Q 010627 190 KEDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKNILLM--S-------KVENQ--------EGVANFDDILA 250 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~~~Ii--a-------kIEt~--------~av~nldeI~~ 250 (505)
.+++ +.+++.|+|+|.+.- ..+++.+.++.+.... ..+.+- + ++++. ..++.+.++.+
T Consensus 87 ~~~~-~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 87 LEDA-RKLLLSGADKVSVNSAAVRRPELIRELADHFGA--QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHH-HHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHH-HHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC--CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 3456 666778999998864 4555556666655421 111111 1 12211 12344455555
Q ss_pred c-CCeeEEe-cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 251 N-SDAFMVA-RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 251 ~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
. ++++++. ++-=+...+. .+ ..+-+.+...+.|++...- .-+.. |+......|+|+++...
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~GG---------I~~~~---d~~~~~~~Gadgv~vgs 226 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGY-DL----RLTRMVAEAVGVPVIASGG---------AGRME---HFLEAFQAGAEAALAAS 226 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCC-CH----HHHHHHHHHCSSCEEEESC---------CCSHH---HHHHHHHTTCSEEEESH
T ss_pred cCCCEEEEecccCCCCcCCC-CH----HHHHHHHHHcCCCEEEeCC---------CCCHH---HHHHHHHCCCHHHHHHH
Confidence 5 6888874 2210122222 21 1122233445899987543 33344 44555557999999864
Q ss_pred cCCCCC-CHHHHHHHH
Q 010627 329 ETAAGA-YPEVAVRTM 343 (505)
Q Consensus 329 Eta~G~-yP~~~V~~m 343 (505)
---.+. .|.++.+.+
T Consensus 227 al~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 227 VFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHTTSSCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHH
Confidence 444444 455555543
No 123
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=73.19 E-value=13 Score=35.67 Aligned_cols=123 Identities=13% Similarity=0.185 Sum_probs=71.2
Q ss_pred cccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh----cCCeeEEecC---ccc---Cc
Q 010627 196 WGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA----NSDAFMVARG---DLG---ME 265 (505)
Q Consensus 196 ~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~----~sDgImIaRg---DLg---~e 265 (505)
.+++.|+|+|-++- +.-.+..+|+++. ....|-+-+- +.+|+.+ -+|.|.+++- +.. ..
T Consensus 107 lA~~~gAdGVHLg~--~dl~~~~~r~~~~---~~~~iG~S~h------t~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~ 175 (243)
T 3o63_A 107 IARAAGADVLHLGQ--RDLPVNVARQILA---PDTLIGRSTH------DPDQVAAAAAGDADYFCVGPCWPTPTKPGRAA 175 (243)
T ss_dssp HHHHHTCSEEEECT--TSSCHHHHHHHSC---TTCEEEEEEC------SHHHHHHHHHSSCSEEEECCSSCCCC-----C
T ss_pred HHHHhCCCEEEecC--CcCCHHHHHHhhC---CCCEEEEeCC------CHHHHHHHhhCCCCEEEEcCccCCCCCCCcch
Confidence 35677999998874 2334566777663 3334444333 3444433 3699999762 111 12
Q ss_pred CCchhHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHH
Q 010627 266 IPIEKIFLAQKVMIYKCNI--QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTM 343 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~--~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m 343 (505)
.+++.+..+ +.. ..+|++...-+ |.. ++......|+|++.+.+.-..-..|.++++.+
T Consensus 176 ~gl~~l~~~-------~~~~~~~iPvvAiGGI----------~~~---ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l 235 (243)
T 3o63_A 176 PGLGLVRVA-------AELGGDDKPWFAIGGI----------NAQ---RLPAVLDAGARRIVVVRAITSADDPRAAAEQL 235 (243)
T ss_dssp CCHHHHHHH-------HTC---CCCEEEESSC----------CTT---THHHHHHTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred hhHHHHHHH-------HHhccCCCCEEEecCC----------CHH---HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHH
Confidence 233322222 222 37898764332 222 34566678999999866555567899999988
Q ss_pred HHHHHH
Q 010627 344 AQICVE 349 (505)
Q Consensus 344 ~~i~~~ 349 (505)
.+.+.+
T Consensus 236 ~~~~~~ 241 (243)
T 3o63_A 236 RSALTA 241 (243)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 876543
No 124
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=72.86 E-value=71 Score=31.13 Aligned_cols=144 Identities=15% Similarity=0.158 Sum_probs=86.0
Q ss_pred ChhcHHHHHhcccc--cCCCEEEEcCC-------CChhHHHHHHHHHhccCCCceEEE-EecCHHHHhcHHHHHhcCCee
Q 010627 186 TEKDKEDILKWGIP--NQIDMIALSFV-------RKGSDLVGVRKLLGGHAKNILLMS-KVENQEGVANFDDILANSDAF 255 (505)
Q Consensus 186 te~D~~di~~~al~--~g~d~V~~sfV-------~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~sDgI 255 (505)
|.+|.--+.+.+.+ .|-+||=+--+ .+..+..+.-+.|.+.| ..++. -..++.--+.+++. -+|.+
T Consensus 85 ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~G--f~Vlpy~~dd~~~akrl~~~--G~~aV 160 (265)
T 1wv2_A 85 DAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDG--FDVMVYTSDDPIIARQLAEI--GCIAV 160 (265)
T ss_dssp SHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTT--CEEEEEECSCHHHHHHHHHS--CCSEE
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHh--CCCEE
Confidence 55655555456655 47788877766 33333333333333323 45553 45555444443332 26888
Q ss_pred EEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCC
Q 010627 256 MVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAY 335 (505)
Q Consensus 256 mIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~y 335 (505)
|.-...-|...|+.. +...+.|.+ ..+.|||++.. +-|. +|++.++..|+|++++..=-+.++.
T Consensus 161 mPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eGG---------I~TP---sDAa~AmeLGAdgVlVgSAI~~a~d 224 (265)
T 1wv2_A 161 MPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDAG---------VGTA---SDAAIAMELGCEAVLMNTAIAHAKD 224 (265)
T ss_dssp EECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCSH---HHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred EeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHHhCCCC
Confidence 773334455555545 334455554 46899998543 2232 5778999999999999866667889
Q ss_pred HHHHHHHHHHHHHH
Q 010627 336 PEVAVRTMAQICVE 349 (505)
Q Consensus 336 P~~~V~~m~~i~~~ 349 (505)
|.+-.+.|..-++.
T Consensus 225 P~~ma~af~~Av~a 238 (265)
T 1wv2_A 225 PVMMAEAMKHAIVA 238 (265)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 98888887765533
No 125
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=71.61 E-value=18 Score=35.05 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=72.9
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCC-ceEEEEecCHHHHhcHHHHHhcCCee--EEec-CcccCcCCchh
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKN-ILLMSKVENQEGVANFDDILANSDAF--MVAR-GDLGMEIPIEK 270 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~-~~IiakIEt~~av~nldeI~~~sDgI--mIaR-gDLg~e~~~~~ 270 (505)
+.+.+.|+|++++|-. -.++..++++.+++.|-+ +.+++ -....+.+.+|++.++|. ++.+ |==|.. ..
T Consensus 110 ~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lva---P~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~---~~ 182 (252)
T 3tha_A 110 KKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVS---VTTPKERVKKLVKHAKGFIYLLASIGITGTK---SV 182 (252)
T ss_dssp HHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEE---TTSCHHHHHHHHTTCCSCEEEECCSCSSSCS---HH
T ss_pred HHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeC---CCCcHHHHHHHHHhCCCeEEEEecCCCCCcc---cC
Confidence 6678899999999987 456788888888877754 33332 222358899999998776 3332 212221 23
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 271 IFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 271 v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
++.-.+..++..+++ +.|+++..- .-|...+. .+..++|++...
T Consensus 183 ~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 183 EEAILQDKVKEIRSFTNLPIFVGFG---------IQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEESS---------CCSHHHHH----HHTTTSSEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEcC---------cCCHHHHH----HHHhcCCEEEEC
Confidence 344456677777765 679987653 33444333 334589999884
No 126
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=71.50 E-value=27 Score=32.55 Aligned_cols=130 Identities=12% Similarity=0.104 Sum_probs=74.8
Q ss_pred HHHHhcccccCCCEEEEc-----CCCC----hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 191 EDILKWGIPNQIDMIALS-----FVRK----GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~s-----fV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRg 260 (505)
+++ +.+.+.|+|++-+= |+.. .+.++++++.+ .....+--++.+++ +.++..+++ +|++.+--+
T Consensus 23 ~~i-~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 23 AEA-DRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHH-HHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHH-HHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 455 67788899987665 7766 66666666544 12233446677663 347777765 699987522
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHc---CCceeeecc-c-CCC-CC
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVMLSG-E-TAA-GA 334 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~---G~D~imLs~-E-ta~-G~ 334 (505)
. .+ ....+.++.++++|+.++++. +|. |..|. ...+.+ ++|.+++.. + +.. -+
T Consensus 97 ~--~~-------~~~~~~~~~i~~~g~~igv~~--------~p~-t~~e~---~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 97 V--SR-------DNWQELIQSIKAKGMRPGVSL--------RPG-TPVEE---VFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp G--CT-------TTHHHHHHHHHHTTCEEEEEE--------CTT-SCGGG---GHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred C--cc-------cHHHHHHHHHHHcCCCEEEEE--------eCC-CCHHH---HHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 1 11 111356777788899998764 111 11121 234556 999998832 1 111 24
Q ss_pred CHHHHHHHHHHHH
Q 010627 335 YPEVAVRTMAQIC 347 (505)
Q Consensus 335 yP~~~V~~m~~i~ 347 (505)
|+-..++.++++.
T Consensus 156 ~~~~~l~~i~~~~ 168 (228)
T 1h1y_A 156 FMPEMMEKVRALR 168 (228)
T ss_dssp CCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 5555555555544
No 127
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=71.49 E-value=17 Score=35.42 Aligned_cols=127 Identities=15% Similarity=0.125 Sum_probs=67.5
Q ss_pred hhcHHHHHhcccc-cCCCEEEEcCC------------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh---
Q 010627 187 EKDKEDILKWGIP-NQIDMIALSFV------------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA--- 250 (505)
Q Consensus 187 e~D~~di~~~al~-~g~d~V~~sfV------------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--- 250 (505)
..+.....+.+.+ .|+|+|-+.|- .+++.+.++.+.+.+. -+..++.|+=- .+.++.++++
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~~--~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLSP--NVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEECS--CSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEECC--ChHHHHHHHHHHH
Confidence 3444444355555 89999977542 2344444444444432 14678888741 2234444433
Q ss_pred -c-CCeeEEecCcccCc-----------------CCchhHHHHHHHHHHHH-HHcCCCeEEehhhhHhhhcCCCCChHHH
Q 010627 251 -N-SDAFMVARGDLGME-----------------IPIEKIFLAQKVMIYKC-NIQGKPVVTATQMLESMIKSPRPTRAEA 310 (505)
Q Consensus 251 -~-sDgImIaRgDLg~e-----------------~~~~~v~~~qk~Ii~~~-~~~gkpvi~ATqmLeSM~~~~~ptraEv 310 (505)
. +|+|.+.-+..+.. -+....+.. -..+... +....|+|.+.-+- ..
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~GGI~------------~~ 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGMGGVA------------NA 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEECSSCC------------SH
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEECCcC------------CH
Confidence 2 69999832111100 111222222 2333333 34589998765432 23
Q ss_pred HHHHHHHHcCCceeeeccc
Q 010627 311 TDVANAVLDGTDCVMLSGE 329 (505)
Q Consensus 311 ~Dv~nav~~G~D~imLs~E 329 (505)
.|+..++..|+|++++..-
T Consensus 254 ~d~~~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHHHTCSEEEECTH
T ss_pred HHHHHHHHcCCCEEEECHH
Confidence 4667788889999999643
No 128
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=71.33 E-value=9.6 Score=39.69 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=61.2
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCC---------------------h---hHHHHHHHHHhccCCCceEEEE--e
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRK---------------------G---SDLVGVRKLLGGHAKNILLMSK--V 236 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~s---------------------a---~dv~~v~~~l~~~~~~~~Iiak--I 236 (505)
|.+++.|..++.+.+.+.|+|+|.++.-.. + +-+.++++.+ +.++.||+- |
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v---~~~iPIIg~GGI 354 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT---NKQIPIIASGGI 354 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHT---TTCSCEEECSSC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHh---CCCCCEEEECCC
Confidence 456777788887888899999999986321 1 2233333333 446788875 6
Q ss_pred cCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 010627 237 ENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 237 Et~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkp 288 (505)
.|.+-+ .+-|..-+|+|+|+|+=+.- |..-+..+.+.+-+...+.|..
T Consensus 355 ~s~eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 355 FSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp CSHHHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred CCHHHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 665443 33344458999999986521 2334445556666666666644
No 129
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=71.00 E-value=30 Score=33.83 Aligned_cols=127 Identities=11% Similarity=0.002 Sum_probs=74.3
Q ss_pred HHHhcccccCCCEEEEcC-CCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc----CCeeEEecCcccC-c
Q 010627 192 DILKWGIPNQIDMIALSF-VRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN----SDAFMVARGDLGM-E 265 (505)
Q Consensus 192 di~~~al~~g~d~V~~sf-V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~----sDgImIaRgDLg~-e 265 (505)
.+ ..+..+|+|.|.+-- .-+.+++.++.++..+.| +.+++-+-+ .+|+..+ +|.|-+..-||.. +
T Consensus 134 qi-~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh~------~eEl~~A~~~ga~iIGinnr~l~t~~ 204 (272)
T 3tsm_A 134 QV-YEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVHD------EAEMERALKLSSRLLGVNNRNLRSFE 204 (272)
T ss_dssp HH-HHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEECS------HHHHHHHTTSCCSEEEEECBCTTTCC
T ss_pred HH-HHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeCC------HHHHHHHHhcCCCEEEECCCCCccCC
Confidence 45 667888999977753 345677888877777664 455555544 4444332 5777776445543 2
Q ss_pred CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHH
Q 010627 266 IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMA 344 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~ 344 (505)
..++....+ +.... .++|++. .+..-|.+ |+..+...|+||++...---....|.++++-+.
T Consensus 205 ~dl~~~~~L----~~~ip-~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 205 VNLAVSERL----AKMAP-SDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp BCTHHHHHH----HHHSC-TTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred CChHHHHHH----HHhCC-CCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 222222222 22111 2567664 33445555 455566679999998544444567877777653
No 130
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=70.01 E-value=23 Score=33.74 Aligned_cols=43 Identities=7% Similarity=0.011 Sum_probs=31.5
Q ss_pred cHHHHHhcccccCCCEEEEcCCC----------ChhHHHHHHHHHhccCCCce
Q 010627 189 DKEDILKWGIPNQIDMIALSFVR----------KGSDLVGVRKLLGGHAKNIL 231 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~----------sa~dv~~v~~~l~~~~~~~~ 231 (505)
+..+..+.+.+.|+|+|=+.+-. +.+++.++++.+.+.|-.+.
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 34444478889999999987654 46778899999988765433
No 131
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=69.82 E-value=31 Score=31.64 Aligned_cols=127 Identities=14% Similarity=0.108 Sum_probs=68.3
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecC---cc----cCcCC
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARG---DL----GMEIP 267 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRg---DL----g~e~~ 267 (505)
+.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|++-+.... ..-+|++.+++- .- +...+
T Consensus 88 ~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e~~~a~--~~g~d~v~~~~v~~t~~~~~~~~~~~ 159 (227)
T 2tps_A 88 ELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSEVKQAE--EDGADYVGLGPIYPTETKKDTRAVQG 159 (227)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHHHHHHH--HHTCSEEEECCSSCCCSSSSCCCCCT
T ss_pred HHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHHHHHHH--hCCCCEEEECCCcCCCCCCCCCCccC
Confidence 34567799999986533 2466666544 32 22222235544322211 123799997431 11 12233
Q ss_pred chhHHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHH
Q 010627 268 IEKIFLAQKVMIYKCNIQG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQI 346 (505)
Q Consensus 268 ~~~v~~~qk~Ii~~~~~~g-kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i 346 (505)
++.+..+ +.... .|++.+.-+ .|. ++..+...|+|++.++.--...+.|.+.++.+.+.
T Consensus 160 ~~~l~~~-------~~~~~~~pvia~GGI--------~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~ 219 (227)
T 2tps_A 160 VSLIEAV-------RRQGISIPIVGIGGI--------TID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFREE 219 (227)
T ss_dssp THHHHHH-------HHTTCCCCEEEESSC--------CTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHH-------HHhCCCCCEEEEcCC--------CHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHH
Confidence 3333322 22335 898876532 122 33455667999999976444446787777776665
Q ss_pred HHH
Q 010627 347 CVE 349 (505)
Q Consensus 347 ~~~ 349 (505)
+++
T Consensus 220 ~~~ 222 (227)
T 2tps_A 220 IQT 222 (227)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 132
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=69.74 E-value=26 Score=32.05 Aligned_cols=127 Identities=9% Similarity=0.010 Sum_probs=67.0
Q ss_pred HHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhH
Q 010627 192 DILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKI 271 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v 271 (505)
++ +.+++.|+|+|.++. ... ++.+ ..++.|. .++.-+.|++-+. .....-+|.|.+-+++ ..+++.+
T Consensus 72 ~i-~~a~~~Gad~V~~~~-~~~-~~~~---~~~~~g~--~~~~g~~t~~e~~--~a~~~G~d~v~v~~t~---~~g~~~~ 138 (212)
T 2v82_A 72 QV-DALARMGCQLIVTPN-IHS-EVIR---RAVGYGM--TVCPGCATATEAF--TALEAGAQALKIFPSS---AFGPQYI 138 (212)
T ss_dssp HH-HHHHHTTCCEEECSS-CCH-HHHH---HHHHTTC--EEECEECSHHHHH--HHHHTTCSEEEETTHH---HHCHHHH
T ss_pred HH-HHHHHcCCCEEEeCC-CCH-HHHH---HHHHcCC--CEEeecCCHHHHH--HHHHCCCCEEEEecCC---CCCHHHH
Confidence 56 777889999998664 223 2322 2333342 3333355544332 1122236998874432 1222222
Q ss_pred HHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCC----CCHHHHHHHHHH
Q 010627 272 FLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAG----AYPEVAVRTMAQ 345 (505)
Q Consensus 272 ~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G----~yP~~~V~~m~~ 345 (505)
. +.+... +.|++...-+ +. .++..+...|+|++.+..--..+ ..|.+.++.+.+
T Consensus 139 ~-------~l~~~~~~~ipvia~GGI----------~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 139 K-------ALKAVLPSDIAVFAVGGV----------TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp H-------HHHTTSCTTCEEEEESSC----------CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred H-------HHHHhccCCCeEEEeCCC----------CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH
Confidence 2 222233 3787765432 21 24456666799999986433333 357788877777
Q ss_pred HHHHHh
Q 010627 346 ICVEAE 351 (505)
Q Consensus 346 i~~~aE 351 (505)
.+.++-
T Consensus 199 ~~~~~~ 204 (212)
T 2v82_A 199 AYREAV 204 (212)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
No 133
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=69.28 E-value=13 Score=34.45 Aligned_cols=134 Identities=9% Similarity=-0.031 Sum_probs=72.6
Q ss_pred ccccCCCEEEEcCCCChhHHHHHHHHHhccCCCce--EE-EEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHH
Q 010627 197 GIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNIL--LM-SKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFL 273 (505)
Q Consensus 197 al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~--Ii-akIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~ 273 (505)
+.+.|+|+|.+..--..+.++.+.+.+++.|.... ++ +.- ....+.+.++ . .+-+.+.++-++.+.|....+.
T Consensus 76 ~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~t--~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 76 CFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWT--WEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCCC--HHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCCC--hhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 45789999998876666668888888877665432 22 211 2233444443 2 3444444444444444322111
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 274 AQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 274 ~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
-.+.+-+.+ ..+.|+++..-+ .|.. +..++..|+|.+....--.....|.++++.+.+.+.
T Consensus 152 ~i~~lr~~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIA 212 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHH
Confidence 112222222 234556653321 1221 355677899999986443334469999888876553
No 134
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=69.24 E-value=22 Score=31.11 Aligned_cols=63 Identities=11% Similarity=0.154 Sum_probs=35.7
Q ss_pred EEecCCCEEEEEecCCCCCCccEEEecch-------hhhcccCCCCEEEEeCC----eEEEEEEEEee-eCCeEEEEEee
Q 010627 96 IQLKQGQEITISTDYTIKGDENMICMSYK-------KLAVDVQPGSVILCSDG----TISFTVLECNV-KAGLVKCRCEN 163 (505)
Q Consensus 96 i~l~~G~~v~l~~~~~~~~~~~~i~v~~~-------~~~~~v~~Gd~I~idDG----~i~l~V~~v~~-~~~~i~~~v~~ 163 (505)
|..+.|..+++|.+ +.|++... -+..+|++||.|++.|| ...-+|.++.. ....++|=...
T Consensus 58 I~t~~g~~L~lTp~-------H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~ 130 (145)
T 1at0_A 58 LHTDGGAVLTVTPA-------HLVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTR 130 (145)
T ss_dssp EEETTSCEEEECTT-------CEEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEES
T ss_pred EEECCCCEEEEeCC-------CEEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccC
Confidence 34455666666654 23444322 36789999999999987 33344554322 23346663333
Q ss_pred Cc
Q 010627 164 SA 165 (505)
Q Consensus 164 gG 165 (505)
.|
T Consensus 131 ~G 132 (145)
T 1at0_A 131 EG 132 (145)
T ss_dssp SS
T ss_pred cE
Confidence 33
No 135
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=68.99 E-value=7.4 Score=41.36 Aligned_cols=51 Identities=24% Similarity=0.385 Sum_probs=43.4
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 16 KTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+-.+-+.+|...++.+.+++|+++|+++.=||++||..+...+.++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 445667888888889999999999999999999999888777777777764
No 136
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=68.74 E-value=9.1 Score=37.39 Aligned_cols=90 Identities=18% Similarity=0.287 Sum_probs=53.3
Q ss_pred HHHHHhcccccCCCEE--EEcC---CCChhHHHHH-----------------HHHHhccCCCceEEEEec-CH---HHHh
Q 010627 190 KEDILKWGIPNQIDMI--ALSF---VRKGSDLVGV-----------------RKLLGGHAKNILLMSKVE-NQ---EGVA 243 (505)
Q Consensus 190 ~~di~~~al~~g~d~V--~~sf---V~sa~dv~~v-----------------~~~l~~~~~~~~IiakIE-t~---~av~ 243 (505)
.+.+ +...+.|+|+| .+|| +-+..-|++. -+.+++.+.+++++.+.- ++ -|++
T Consensus 35 ~~~~-~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 35 LKII-QTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHH-HHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHH-HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 4445 55567899975 5667 3343334432 222333335677887765 54 3555
Q ss_pred cHHHHH-hc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeE
Q 010627 244 NFDDIL-AN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVV 290 (505)
Q Consensus 244 nldeI~-~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi 290 (505)
++-+=+ ++ .||+++. | +|.++ ..+..+.|+++|...+
T Consensus 114 ~f~~~~~~aGvdgvii~--D----lp~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--D----VPVEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHTCCEEEET--T----SCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeC--C----CCHhh----HHHHHHHHHHcCCeEE
Confidence 553333 33 6999994 4 45554 4678889999998755
No 137
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=68.57 E-value=19 Score=34.68 Aligned_cols=115 Identities=11% Similarity=0.067 Sum_probs=64.7
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEec---CcccCcCCchhH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVAR---GDLGMEIPIEKI 271 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaR---gDLg~e~~~~~v 271 (505)
+.+.+.|+|++.+|-.. .+++.++.+.+++.|-+ ++..+.-....+.+.+|++.++|.+..- |=-|..-+.. .
T Consensus 116 ~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~-~ 191 (262)
T 2ekc_A 116 RLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLP-Y 191 (262)
T ss_dssp HHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC----------C
T ss_pred HHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcC-c
Confidence 66678899999998654 47788888888877643 2333332234467889998887654321 1222222211 0
Q ss_pred HHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 272 FLAQKVMIYKCNI-QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 272 ~~~qk~Ii~~~~~-~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.-....++..++ .+.|+.+..- .-|.. ++.. +..|+|+++..
T Consensus 192 -~~~~~~v~~vr~~~~~pv~vG~G---------I~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 192 -ERIKKKVEEYRELCDKPVVVGFG---------VSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp -HHHHHHHHHHHHHCCSCEEEESS---------CCSHH---HHHH-HHTTSSEEEEC
T ss_pred -ccHHHHHHHHHhhcCCCEEEeCC---------CCCHH---HHHH-HHcCCCEEEEC
Confidence 112233444444 3789877543 22232 3344 67899999984
No 138
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=67.56 E-value=17 Score=35.49 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=70.0
Q ss_pred cHHHHHhcccccCCCEEEEc-----CCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhc---HHHHHhc-CCeeEEec
Q 010627 189 DKEDILKWGIPNQIDMIALS-----FVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVAN---FDDILAN-SDAFMVAR 259 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~s-----fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~n---ldeI~~~-sDgImIaR 259 (505)
|...+.+...+.|+++|.+- |=.+.++++++++.. +++|+.| +.+-+ +++-.+. +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 44555455566899999763 223567888887754 4677765 22222 3333333 79999977
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
.+|. . .-.+.+++.|+..|..+++.+. |..| +..+...|+|.+-.++
T Consensus 144 a~l~----~----~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE----Q----SVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC----H----HHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEES
T ss_pred ccCC----H----HHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECC
Confidence 7774 1 2346678889999999876432 3334 3455677999998875
No 139
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=67.47 E-value=29 Score=34.30 Aligned_cols=95 Identities=16% Similarity=0.063 Sum_probs=58.4
Q ss_pred hcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEec-Ccc
Q 010627 195 KWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVAR-GDL 262 (505)
Q Consensus 195 ~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaR-gDL 262 (505)
++.++.|+|++++. +.-|.++=.++ +...+..+.++.||+-+ -+.++++......+. +|++|+-+ ...
T Consensus 42 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 42 HKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 78889999999753 22334444444 44445556778999987 455666655555544 69999854 333
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 263 GMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 263 g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
......+.+...-+.| |.+.+.|+++-
T Consensus 122 ~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 122 RGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp GGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 2223445555555555 44568999864
No 140
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=66.81 E-value=34 Score=32.40 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCC------CeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 276 KVMIYKCNIQGK------PVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 276 k~Ii~~~~~~gk------pvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
..+++.|+++|. |++= --+-.+++..|...|+|.+-+.
T Consensus 96 ~evi~~~~~~~v~~~~~~~~~P--------------G~~TptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 96 PELIEKAKQVKLDGQWQGVFLP--------------GVATASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEE--------------EECSHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHHcCCCccCCCeEeC--------------CCCCHHHHHHHHHcCCCEEEEC
Confidence 578899999999 8752 1122456678899999999774
No 141
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=66.40 E-value=30 Score=33.90 Aligned_cols=97 Identities=10% Similarity=0.076 Sum_probs=59.5
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+ -+.++++......+. +|++|+.+-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 33378889999999764 22233333333 33344446678999988 356666666555544 799999754
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- ...+.+...-+.|.+++ +.|+++-
T Consensus 107 ~y~~-~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 107 YYNK-TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp CSSC-CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 4322 23455555555555544 8999874
No 142
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=66.35 E-value=25 Score=32.66 Aligned_cols=128 Identities=15% Similarity=0.166 Sum_probs=68.0
Q ss_pred HHHHHhcccccCCCEEEEcCCCC--------hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCee---EEe
Q 010627 190 KEDILKWGIPNQIDMIALSFVRK--------GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAF---MVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~s--------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgI---mIa 258 (505)
.+.+ +.+++.|+|+|.+..... .+-++.+++.. .+..++..+.+.+-.... ...-+|.| +.+
T Consensus 91 ~~~i-~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~----~~~~v~~~~~t~~ea~~a--~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 91 MTEV-DQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY----PNQLLMADISTFDEGLVA--HQAGIDFVGTTLSG 163 (234)
T ss_dssp HHHH-HHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC----TTCEEEEECSSHHHHHHH--HHTTCSEEECTTTT
T ss_pred HHHH-HHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC----CCCeEEEeCCCHHHHHHH--HHcCCCEEeeeccc
Confidence 4456 777889999998865432 23344444433 346788877776442221 12236877 222
Q ss_pred c--CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCH
Q 010627 259 R--GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYP 336 (505)
Q Consensus 259 R--gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP 336 (505)
. +..+. .+ ..+..+ +++ +.. +.|++...- .-|.. |+..+...|+|++++.. +.=+ |
T Consensus 164 ~~~~~~~~-~~-~~~~~i-~~~---~~~-~ipvia~GG---------I~s~~---~~~~~~~~Gad~v~vGs--al~~-p 221 (234)
T 1yxy_A 164 YTPYSRQE-AG-PDVALI-EAL---CKA-GIAVIAEGK---------IHSPE---EAKKINDLGVAGIVVGG--AITR-P 221 (234)
T ss_dssp SSTTSCCS-SS-CCHHHH-HHH---HHT-TCCEEEESC---------CCSHH---HHHHHHTTCCSEEEECH--HHHC-H
T ss_pred cCCCCcCC-CC-CCHHHH-HHH---HhC-CCCEEEECC---------CCCHH---HHHHHHHCCCCEEEEch--HHhC-h
Confidence 2 22111 11 122222 222 223 799886543 22333 45556667999999853 2222 7
Q ss_pred HHHHHHHHHH
Q 010627 337 EVAVRTMAQI 346 (505)
Q Consensus 337 ~~~V~~m~~i 346 (505)
.++++.+.+.
T Consensus 222 ~~~~~~l~~~ 231 (234)
T 1yxy_A 222 KEIAERFIEA 231 (234)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777766543
No 143
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=66.19 E-value=20 Score=35.51 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=59.0
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHH-HHHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVG-VRKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~-v~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.+ ++...+..+.+++||+-+ -+.++++....-.+. +||+|+-+-
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 33378889999999873 2223333333 333344446678999987 356666665555444 699999765
Q ss_pred ccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
... ...+.+.+...-+.|. .+.+.|+++-
T Consensus 113 yy~~~~~~s~~~l~~~f~~va---~a~~lPiilY 143 (309)
T 3fkr_A 113 YHGATFRVPEAQIFEFYARVS---DAIAIPIMVQ 143 (309)
T ss_dssp CBTTTBCCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCccCCCCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 442 2334455555545554 4558998864
No 144
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=65.87 E-value=19 Score=36.69 Aligned_cols=98 Identities=15% Similarity=0.060 Sum_probs=58.3
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcCCCC--------------------------hhHHHHHHHHHhccCCCceEEEE--
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSFVRK--------------------------GSDLVGVRKLLGGHAKNILLMSK-- 235 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sfV~s--------------------------a~dv~~v~~~l~~~~~~~~Iiak-- 235 (505)
.+++.|..++.+.+.+.|+|+|.++.-.. -+.+.++++.+ +.++.||+-
T Consensus 230 ~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v---~~~ipvI~~GG 306 (367)
T 3zwt_A 230 DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALT---QGRVPIIGVGG 306 (367)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHT---TTCSCEEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHc---CCCceEEEECC
Confidence 45666777776778899999999874321 13344444444 346777774
Q ss_pred ecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 010627 236 VENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 236 IEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkp 288 (505)
|.|.+-. .+-|..-+|+|+++|+=|-- +..-+..+.+.+-....+.|..
T Consensus 307 I~s~~da--~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~~ 355 (367)
T 3zwt_A 307 VSSGQDA--LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGFG 355 (367)
T ss_dssp CCSHHHH--HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCHHHH--HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCCC
Confidence 7765444 23333348999999986521 2233445555555555555543
No 145
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=65.58 E-value=5.8 Score=37.69 Aligned_cols=127 Identities=10% Similarity=0.127 Sum_probs=70.0
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHH----HHHhc-----CCeeEEecCcccCc
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFD----DILAN-----SDAFMVARGDLGME 265 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nld----eI~~~-----sDgImIaRgDLg~e 265 (505)
+...+.|+|++.+.-.-..+.++.+.+.+++.+..+.+++..-++.+.+.++ .++.. .||++.+.
T Consensus 85 ~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------ 158 (228)
T 3m47_A 85 RATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------ 158 (228)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------
Confidence 4446789999998766666778888888877666666667776665433222 22221 26655432
Q ss_pred CCchhHHHHHHHHHHHHHHcCC-CeEEehhhhHhhhcCCCCC-hHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHH
Q 010627 266 IPIEKIFLAQKVMIYKCNIQGK-PVVTATQMLESMIKSPRPT-RAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTM 343 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~~gk-pvi~ATqmLeSM~~~~~pt-raEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m 343 (505)
...+++.. +-+. .|. -.++. |- +++-.+. .++..|+|.++...--.-...|.++++.+
T Consensus 159 t~~~e~~~----ir~~---~~~~~~iv~------------PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~ 218 (228)
T 3m47_A 159 TRPERLSR----LREI---IGQDSFLIS------------PGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGA 218 (228)
T ss_dssp SCHHHHHH----HHHH---HCSSSEEEE------------CC----------CGGGTCSEEEECHHHHTSSCHHHHHHHH
T ss_pred CChHHHHH----HHHh---cCCCCEEEe------------cCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHH
Confidence 01222222 2222 233 12221 21 3333455 77889999988865555557898888877
Q ss_pred HHHH
Q 010627 344 AQIC 347 (505)
Q Consensus 344 ~~i~ 347 (505)
.+.+
T Consensus 219 ~~~~ 222 (228)
T 3m47_A 219 IESI 222 (228)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 6644
No 146
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=65.50 E-value=37 Score=32.08 Aligned_cols=113 Identities=9% Similarity=0.074 Sum_probs=71.0
Q ss_pred CChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe--cCH-------HHHhcHHHHHhc-CCe
Q 010627 185 LTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV--ENQ-------EGVANFDDILAN-SDA 254 (505)
Q Consensus 185 lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--Et~-------~av~nldeI~~~-sDg 254 (505)
-+..+...+.+.+.+.|+.+|.+ .+.++++++|+.. +++|+..+ .-. .-++.+++..+. +|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADI 104 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCE
Confidence 34567777756667789999886 5889999888754 35666432 100 013345555554 799
Q ss_pred eEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 255 FMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 255 ImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
|.+.-..+ ... ...+.+++.++++|.+++.-. .|..|. ..+...|+|.+..
T Consensus 105 I~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~eea---~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 105 IAFDASFR---SRP----VDIDSLLTRIRLHGLLAMADC-----------STVNEG---ISCHQKGIEFIGT 155 (229)
T ss_dssp EEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEEC-----------SSHHHH---HHHHHTTCSEEEC
T ss_pred EEECcccc---CCh----HHHHHHHHHHHHCCCEEEEec-----------CCHHHH---HHHHhCCCCEEEe
Confidence 88754322 111 234567788888899988632 344443 4677789999953
No 147
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=65.46 E-value=11 Score=38.57 Aligned_cols=49 Identities=24% Similarity=0.391 Sum_probs=39.1
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 18 KIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 18 kIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.++.+|+.
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~ 146 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 146 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHh
Confidence 4555566655678999999999999999999999888776667776653
No 148
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=64.82 E-value=48 Score=31.28 Aligned_cols=113 Identities=9% Similarity=0.039 Sum_probs=71.2
Q ss_pred CChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEE--EecCH-------HHHhcHHHHHhc-CCe
Q 010627 185 LTEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMS--KVENQ-------EGVANFDDILAN-SDA 254 (505)
Q Consensus 185 lte~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~-------~av~nldeI~~~-sDg 254 (505)
-+..+...+.+...+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++..+. +|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~ 104 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAI 104 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCE
Confidence 34567777756667789998876 5789999888754 356665 32100 023345555554 799
Q ss_pred eEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 255 FMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 255 ImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
|.+.-..+. -| ...+.+++.++++|.++++- ..|..|. ..+...|+|.+..
T Consensus 105 V~l~~~~~~--~p-----~~l~~~i~~~~~~g~~v~~~-----------v~t~eea---~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 105 IAVDGTARQ--RP-----VAVEALLARIHHHHLLTMAD-----------CSSVDDG---LACQRLGADIIGT 155 (232)
T ss_dssp EEEECCSSC--CS-----SCHHHHHHHHHHTTCEEEEE-----------CCSHHHH---HHHHHTTCSEEEC
T ss_pred EEECccccC--CH-----HHHHHHHHHHHHCCCEEEEe-----------CCCHHHH---HHHHhCCCCEEEE
Confidence 988643221 01 23466788888889998863 2344443 5667789999963
No 149
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=64.53 E-value=41 Score=32.89 Aligned_cols=100 Identities=7% Similarity=0.057 Sum_probs=61.4
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEe
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIa 258 (505)
.+.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+.
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3333378889999999862 3344444444444 4444456788999884 36777666665554 6999997
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHc---CCCeEEe
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQ---GKPVVTA 292 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~---gkpvi~A 292 (505)
+-...-..+.+.+...-+.| |.+. +.|+++-
T Consensus 106 ~P~y~~~~s~~~l~~~f~~v---a~a~p~~~lPiilY 139 (294)
T 3b4u_A 106 PPSYFKNVSDDGLFAWFSAV---FSKIGKDARDILVY 139 (294)
T ss_dssp CCCSSCSCCHHHHHHHHHHH---HHHHCTTCCCEEEE
T ss_pred CCcCCCCCCHHHHHHHHHHH---HHhcCCCCCcEEEE
Confidence 65443212344555444554 4455 7998863
No 150
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=64.38 E-value=19 Score=34.79 Aligned_cols=117 Identities=11% Similarity=0.042 Sum_probs=66.8
Q ss_pred HHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEe--c-CcccCcCCc
Q 010627 192 DILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVA--R-GDLGMEIPI 268 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIa--R-gDLg~e~~~ 268 (505)
.+ +.+.+.|+|++.++-... +++.++.+.+++.|.+ .+.-+.-....+.+.+|++.++|.+.. . |=-|..-+.
T Consensus 114 ~~-~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~ 189 (268)
T 1qop_A 114 FY-ARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRG 189 (268)
T ss_dssp HH-HHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC
T ss_pred HH-HHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCC
Confidence 44 556788999999986654 6788888888877643 222332223456788899888754322 1 111221121
Q ss_pred -hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 269 -EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 269 -~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
+.+....+++-+ ..+.|+++..-+ =|. .++..++..|+|+++..
T Consensus 190 ~~~~~~~i~~lr~---~~~~pi~vggGI---------~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 190 ALPLHHLIEKLKE---YHAAPALQGFGI---------SSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp --CCHHHHHHHHH---TTCCCEEEESSC---------CSH---HHHHHHHHTTCSEEEEC
T ss_pred CchHHHHHHHHHh---ccCCcEEEECCC---------CCH---HHHHHHHHcCCCEEEEC
Confidence 112222222222 237898875432 222 34566678899999984
No 151
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=64.09 E-value=12 Score=35.18 Aligned_cols=129 Identities=13% Similarity=0.041 Sum_probs=64.0
Q ss_pred cccccCCCEEEEcCC---CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcc-cCcCC---c
Q 010627 196 WGIPNQIDMIALSFV---RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDL-GMEIP---I 268 (505)
Q Consensus 196 ~al~~g~d~V~~sfV---~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDL-g~e~~---~ 268 (505)
.+.+.|+|+|.++.- ...+++.+..+...+.| +.++.-+-+.+-.+.+.++ -.+.|-+.+-++ | .| .
T Consensus 77 ~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~~ 150 (219)
T 2h6r_A 77 AIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPVS 150 (219)
T ss_dssp HHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHHHHTTT--CCSEEEECCCC-----------
T ss_pred HHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCCc
Confidence 346679999999985 44456666666655554 3444444332223332222 135555666665 2 12 0
Q ss_pred hhHHH-HHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHH
Q 010627 269 EKIFL-AQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTM 343 (505)
Q Consensus 269 ~~v~~-~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m 343 (505)
..-+. ++ .+.+..++. +.|++... ..-+.. ++......|+|+++..+-.-.-..|.+.++-+
T Consensus 151 t~~~~~~~-~~~~~ir~~~~~~~ii~gg---------GI~~~~---~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 151 KANPEVVE-GTVRAVKEINKDVKVLCGA---------GISKGE---DVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp -----CSH-HHHHHHHHHCTTCEEEECS---------SCCSHH---HHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred cCCHHHHH-HHHHHHHhccCCCeEEEEe---------CcCcHH---HHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 00011 22 333333433 56766532 222222 34445667999999854333345576666554
No 152
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=63.75 E-value=19 Score=33.41 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=57.9
Q ss_pred HHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCC-ce-----------EEEEecC------HHHHhcHHHHHh
Q 010627 191 EDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKN-IL-----------LMSKVEN------QEGVANFDDILA 250 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~-~~-----------IiakIEt------~~av~nldeI~~ 250 (505)
+++ +.+++.|+|+|.+.. ..+++.+.++.+.+ +.+ +. +..++.. ...++.+..+.+
T Consensus 90 ~~~-~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~---g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~ 165 (253)
T 1h5y_A 90 EDA-TTLFRAGADKVSVNTAAVRNPQLVALLAREF---GSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE 165 (253)
T ss_dssp HHH-HHHHHHTCSEEEESHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHH-HHHHHcCCCEEEEChHHhhCcHHHHHHHHHc---CCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh
Confidence 455 556778999998763 23344444444333 321 21 1233311 112333455555
Q ss_pred c-CCeeEEecCcc---cCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 251 N-SDAFMVARGDL---GMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 251 ~-sDgImIaRgDL---g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
. +|.|.+..-+. +....++.+ +++. +..+.|++...- .-+. .|+..+...|+|++++
T Consensus 166 ~G~d~i~~~~~~~~g~~~~~~~~~i----~~l~---~~~~~pvia~GG---------i~~~---~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 166 LGAGEILLTSIDRDGTGLGYDVELI----RRVA---DSVRIPVIASGG---------AGRV---EHFYEAAAAGADAVLA 226 (253)
T ss_dssp HTCSEEEEEETTTTTTCSCCCHHHH----HHHH---HHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEecccCCCCcCcCCHHHH----HHHH---HhcCCCEEEeCC---------CCCH---HHHHHHHHcCCcHHHH
Confidence 5 79888743222 111222222 2222 234789887543 2222 4556666789999999
Q ss_pred cc
Q 010627 327 SG 328 (505)
Q Consensus 327 s~ 328 (505)
..
T Consensus 227 gs 228 (253)
T 1h5y_A 227 AS 228 (253)
T ss_dssp SH
T ss_pred HH
Confidence 54
No 153
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=63.35 E-value=27 Score=34.63 Aligned_cols=97 Identities=10% Similarity=0.139 Sum_probs=59.5
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHH-HHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVR-KLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~-~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +--|.++=.++- ...+..+.+++||+-+= +.++++......+. +|++|+.+-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 33377889999999873 223344444433 33444456789999874 46677666665554 799999754
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
... ....+.+...-+.|. .+.+.|+++-
T Consensus 128 ~y~-~~s~~~l~~~f~~va---~a~~lPiilY 155 (314)
T 3qze_A 128 YYN-KPTQEGMYQHFRHIA---EAVAIPQILY 155 (314)
T ss_dssp CSS-CCCHHHHHHHHHHHH---HHSCSCEEEE
T ss_pred CCC-CCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 332 223345555545554 4458999874
No 154
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=63.10 E-value=8.8 Score=36.12 Aligned_cols=116 Identities=11% Similarity=0.158 Sum_probs=57.7
Q ss_pred HHHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCCceEEEE-----ecCH-------HHHhcHHHHHhc-CCe
Q 010627 190 KEDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKNILLMSK-----VENQ-------EGVANFDDILAN-SDA 254 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~~~Iiak-----IEt~-------~av~nldeI~~~-sDg 254 (505)
.+++ +.+++.|+|.|.+.. ..+++.+.++.+.+ +.++.+-.. +++. ..++.+.+..+. +|.
T Consensus 87 ~~~~-~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~ 162 (244)
T 1vzw_A 87 DDTL-AAALATGCTRVNLGTAALETPEWVAKVIAEH---GDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCAR 162 (244)
T ss_dssp HHHH-HHHHHTTCSEEEECHHHHHCHHHHHHHHHHH---GGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCC
T ss_pred HHHH-HHHHHcCCCEEEECchHhhCHHHHHHHHHHc---CCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCE
Confidence 3456 667888999988763 23344444444443 322222111 2211 233444555555 687
Q ss_pred eEEe---cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHc---CCceeeecc
Q 010627 255 FMVA---RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVMLSG 328 (505)
Q Consensus 255 ImIa---RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~---G~D~imLs~ 328 (505)
|++- |+.-+....++.+ +++ +...+.|++...- .-+ ..|+..+... |+|++++..
T Consensus 163 i~~~~~~~~~~~~g~~~~~~----~~i---~~~~~ipvia~GG---------I~~---~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 163 YVVTDIAKDGTLQGPNLELL----KNV---CAATDRPVVASGG---------VSS---LDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp EEEEEC-------CCCHHHH----HHH---HHTCSSCEEEESC---------CCS---HHHHHHHHTTGGGTEEEEEECH
T ss_pred EEEeccCcccccCCCCHHHH----HHH---HHhcCCCEEEECC---------CCC---HHHHHHHHhhccCCCceeeeeH
Confidence 8773 2211111222222 222 2345899987543 222 3455556656 999999953
No 155
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=62.91 E-value=47 Score=30.22 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=62.8
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceE-EEEecCHHHHhcHHHHHhc-CCeeEEecCcccCcC
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILL-MSKVENQEGVANFDDILAN-SDAFMVARGDLGMEI 266 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~I-iakIEt~~av~nldeI~~~-sDgImIaRgDLg~e~ 266 (505)
+...+.+.+.+.|+++|-+-. .+++.++.++++....+.++.| ...+.+.+ .++..++. +|+|.++--
T Consensus 20 ~~~~~~~~~~~~G~~~i~l~~-~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~---~i~~a~~~Gad~V~~~~~------ 89 (212)
T 2v82_A 20 EALAHVGAVIDAGFDAVEIPL-NSPQWEQSIPAIVDAYGDKALIGAGTVLKPE---QVDALARMGCQLIVTPNI------ 89 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEEET-TSTTHHHHHHHHHHHHTTTSEEEEECCCSHH---HHHHHHHTTCCEEECSSC------
T ss_pred HHHHHHHHHHHCCCCEEEEeC-CChhHHHHHHHHHHhCCCCeEEEeccccCHH---HHHHHHHcCCCEEEeCCC------
Confidence 333333566778999998743 4566666666665543333322 12344443 45555554 688874321
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 267 PIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 267 ~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
...+++.+++.|.++++. ..|..|+ ..+...|+|.+.+
T Consensus 90 --------~~~~~~~~~~~g~~~~~g-----------~~t~~e~---~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 --------HSEVIRRAVGYGMTVCPG-----------CATATEA---FTALEAGAQALKI 127 (212)
T ss_dssp --------CHHHHHHHHHTTCEEECE-----------ECSHHHH---HHHHHTTCSEEEE
T ss_pred --------CHHHHHHHHHcCCCEEee-----------cCCHHHH---HHHHHCCCCEEEE
Confidence 123567888999887653 1244443 5667899999987
No 156
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=62.25 E-value=50 Score=32.57 Aligned_cols=129 Identities=11% Similarity=0.090 Sum_probs=75.2
Q ss_pred hcccccCCCEEEEc-CCCCh------hHHHHHHHHHhccCCCceEEEEecCHH---------HHhcHHHHHhc--CCeeE
Q 010627 195 KWGIPNQIDMIALS-FVRKG------SDLVGVRKLLGGHAKNILLMSKVENQE---------GVANFDDILAN--SDAFM 256 (505)
Q Consensus 195 ~~al~~g~d~V~~s-fV~sa------~dv~~v~~~l~~~~~~~~IiakIEt~~---------av~nldeI~~~--sDgIm 256 (505)
+-+++.|+|.|.+- |+.+. +++.++++.+.+.+ +++|+ |++. .+...-.++.. +|.|=
T Consensus 132 e~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G--lpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VK 207 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG--MPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIK 207 (295)
T ss_dssp HHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT--CCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC--CEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEE
Confidence 44567899987754 44443 23334444554443 55554 4432 22323333333 47665
Q ss_pred EecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCC-CChHHHHHHHHHHHcCCceeeecccCCCCCC
Q 010627 257 VARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPR-PTRAEATDVANAVLDGTDCVMLSGETAAGAY 335 (505)
Q Consensus 257 IaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~-ptraEv~Dv~nav~~G~D~imLs~Eta~G~y 335 (505)
..- +.+. .+++.+.| ..||+++.- +. +++.=...+..++..|++++.......-...
T Consensus 208 t~~-------t~e~----~~~vv~~~---~vPVv~~GG--------~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 208 TYY-------VEKG----FERIVAGC---PVPIVIAGG--------KKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp EEC-------CTTT----HHHHHHTC---SSCEEEECC--------SCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred eCC-------CHHH----HHHHHHhC---CCcEEEEEC--------CCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 541 1122 24444443 689886543 22 2232235567889999999999777666779
Q ss_pred HHHHHHHHHHHHHH
Q 010627 336 PEVAVRTMAQICVE 349 (505)
Q Consensus 336 P~~~V~~m~~i~~~ 349 (505)
|.+.++.+..++.+
T Consensus 266 p~~~~~al~~ivh~ 279 (295)
T 3glc_A 266 PVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988765
No 157
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=62.12 E-value=41 Score=32.89 Aligned_cols=121 Identities=17% Similarity=0.140 Sum_probs=70.6
Q ss_pred hcccccCCCEE-EEc-------------CCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh-cCCeeEEec
Q 010627 195 KWGIPNQIDMI-ALS-------------FVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA-NSDAFMVAR 259 (505)
Q Consensus 195 ~~al~~g~d~V-~~s-------------fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-~sDgImIaR 259 (505)
+.+.+.|+|+| .+- ..++++.++++++.. +++++.|+=.- .++..+...+ -+|+|. +.
T Consensus 35 ~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~-----~iPv~~k~r~g-~~~~~~~~~a~GAd~V~-~~ 107 (305)
T 2nv1_A 35 KIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV-----SIPVMAKARIG-HIVEARVLEAMGVDYID-ES 107 (305)
T ss_dssp HHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC-----SSCEEEEECTT-CHHHHHHHHHHTCSEEE-EC
T ss_pred HHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC-----CCCEEeccccc-chHHHHHHHHCCCCEEE-Ee
Confidence 66778899999 442 223566676665532 46777776431 0122222222 379996 44
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHH
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVA 339 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~ 339 (505)
.+|.. +++ .+.+. ++..|.|+++... + ..+...++..|+|.|.++||+..| -..++
T Consensus 108 ~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~~~~ 163 (305)
T 2nv1_A 108 EVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NIVEA 163 (305)
T ss_dssp TTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CTHHH
T ss_pred ccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-chHHH
Confidence 44422 111 12222 4567899887432 2 224456678899999999998777 45566
Q ss_pred HHHHHHH
Q 010627 340 VRTMAQI 346 (505)
Q Consensus 340 V~~m~~i 346 (505)
+...+.+
T Consensus 164 ~~h~rt~ 170 (305)
T 2nv1_A 164 VRHMRKV 170 (305)
T ss_dssp HHHHHHH
T ss_pred Hhhhhhh
Confidence 6665543
No 158
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=61.55 E-value=40 Score=34.28 Aligned_cols=116 Identities=13% Similarity=0.125 Sum_probs=64.0
Q ss_pred CCCEEEEcC----------CCChhHHHHHHHHHhcc------CCCceEEEEecCHHHHhcHHHHHhc-----CCeeEEe-
Q 010627 201 QIDMIALSF----------VRKGSDLVGVRKLLGGH------AKNILLMSKVENQEGVANFDDILAN-----SDAFMVA- 258 (505)
Q Consensus 201 g~d~V~~sf----------V~sa~dv~~v~~~l~~~------~~~~~IiakIEt~~av~nldeI~~~-----sDgImIa- 258 (505)
.+|+|-+.+ .++++.+.++-+.+.+. ..+.+|+.||=--...+++.+|++. +|||.+-
T Consensus 176 ~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~n 255 (367)
T 3zwt_A 176 LADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTN 255 (367)
T ss_dssp GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred hCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 588887743 23455555554444321 2457899999421112245555553 5999873
Q ss_pred ----cCcc-----cCcCC----chhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCce
Q 010627 259 ----RGDL-----GMEIP----IEKIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDC 323 (505)
Q Consensus 259 ----RgDL-----g~e~~----~~~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~ 323 (505)
|-++ +.+.+ ....+...+.+-+..++. ..|+|...-+- ...|+..++..|+|+
T Consensus 256 tt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~------------s~~da~~~l~~GAd~ 323 (367)
T 3zwt_A 256 TTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS------------SGQDALEKIRAGASL 323 (367)
T ss_dssp CBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC------------SHHHHHHHHHHTCSE
T ss_pred CCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC------------CHHHHHHHHHcCCCE
Confidence 2111 11111 112333344444444455 68998765533 245777888889999
Q ss_pred eeecc
Q 010627 324 VMLSG 328 (505)
Q Consensus 324 imLs~ 328 (505)
||+..
T Consensus 324 V~vgr 328 (367)
T 3zwt_A 324 VQLYT 328 (367)
T ss_dssp EEESH
T ss_pred EEECH
Confidence 99963
No 159
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=61.29 E-value=11 Score=38.34 Aligned_cols=46 Identities=20% Similarity=0.361 Sum_probs=36.5
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 19 IVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 19 Ii~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+.+-+|... .+.++.++++|++++-||++||..+...+.++.+|+.
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK 143 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh
Confidence 455566543 8899999999999999999999887766677666653
No 160
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=60.76 E-value=62 Score=30.25 Aligned_cols=125 Identities=16% Similarity=0.084 Sum_probs=71.2
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEE-e---------------cCHHHHhcHHHHH
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSK-V---------------ENQEGVANFDDIL 249 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-I---------------Et~~av~nldeI~ 249 (505)
.+.+.++..+.+.+.|+|+|=+.+- ...++.++++.+.+.|-.+..+.- . +..++++.+...+
T Consensus 21 ~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 99 (269)
T 3ngf_A 21 NEVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIAL 99 (269)
T ss_dssp TTSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHH
Confidence 4455555558889999999988653 345788999999877654332220 0 0123455555555
Q ss_pred hc-----CCeeEEecCcccCcCC----chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhh-----cCCCCChHHHHHHHH
Q 010627 250 AN-----SDAFMVARGDLGMEIP----IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMI-----KSPRPTRAEATDVAN 315 (505)
Q Consensus 250 ~~-----sDgImIaRgDLg~e~~----~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~-----~~~~ptraEv~Dv~n 315 (505)
+. ++.|.+..| .....+ ++.+...-+++.+.|.++|..+.+ |.|- .+...|..++.++..
T Consensus 100 ~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~n~~~~~~~~~~~~~~~~~l~~ 173 (269)
T 3ngf_A 100 HYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV-----EPLNTRNMPGYFIVHQLEAVGLVK 173 (269)
T ss_dssp HHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE-----CCCCTTTSTTBSCCCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----eeCCcccCccchhcCHHHHHHHHH
Confidence 43 356666666 322222 234444556677777777766553 3211 123456666666666
Q ss_pred HH
Q 010627 316 AV 317 (505)
Q Consensus 316 av 317 (505)
.+
T Consensus 174 ~v 175 (269)
T 3ngf_A 174 RV 175 (269)
T ss_dssp HH
T ss_pred Hh
Confidence 55
No 161
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=60.27 E-value=52 Score=32.48 Aligned_cols=117 Identities=12% Similarity=0.121 Sum_probs=68.7
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.|+.+-. |..+....+...-..|++-+....+ +. ..++.+...+++++-...+
T Consensus 86 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~-~~~~~~~a~~l~~~~~~~~- 149 (325)
T 3dwg_A 86 ISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GG-SNTAVATAKELAATNPSWV- 149 (325)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TT-HHHHHHHHHHHHHHCTTSB-
T ss_pred HHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCeE-
Confidence 456778899999987531 2222223445556679998777533 12 3466666666544322121
Q ss_pred chhhHHhhhhCCCCCCCchh---hHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPLE---SLASSAVRTANSAR-ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~---~ia~~av~~a~~~~-a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
|..-| .++.. -....+.++..+++ .+.||+.+-+|.|.--+++ ..|.+.|+++
T Consensus 150 ~~~~~----------~np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (325)
T 3dwg_A 150 MLYQY----------GNPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAA 210 (325)
T ss_dssp CCCTT----------TCHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEE
T ss_pred eCCCC----------CCHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 11001 11211 12333456666653 7999999999998765554 4799999999
No 162
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.10 E-value=11 Score=38.81 Aligned_cols=50 Identities=16% Similarity=0.305 Sum_probs=40.5
Q ss_pred eEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 17 TKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 17 tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
..+.+.+|+.....+.++.++++|++.+=+|.+||+++...+.++.+|+.
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 34667777655567888999999999999999999987777778777764
No 163
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=59.95 E-value=43 Score=32.93 Aligned_cols=97 Identities=12% Similarity=0.137 Sum_probs=59.3
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+.+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33378889999999863 2334444444433 3444456789999984 46777766665554 699998654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 117 ~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK-PSQEGMYQHFKAI---AESTPLPVMLY 144 (301)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4321 2334444444444 55568999863
No 164
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=59.92 E-value=33 Score=33.68 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=56.6
Q ss_pred hcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCC-CceEEEEec---CHHHHhcHHHHHhc-CCeeEEecCcc
Q 010627 195 KWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAK-NILLMSKVE---NQEGVANFDDILAN-SDAFMVARGDL 262 (505)
Q Consensus 195 ~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~-~~~IiakIE---t~~av~nldeI~~~-sDgImIaRgDL 262 (505)
++.++.|+|++++. +.-|.++=.++ +...+..+. +++||+-+= +.++++......+. +|++|+-+-..
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 114 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYY 114 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 78889999999763 22233333333 333444456 789999874 56666666555544 69999975443
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 263 GMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 263 g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.- ...+.+...-+.| |.+.+.|+++-
T Consensus 115 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 140 (301)
T 3m5v_A 115 NK-PTQQGLYEHYKAI---AQSVDIPVLLY 140 (301)
T ss_dssp SC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 21 2334444444444 44558999864
No 165
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=59.08 E-value=17 Score=35.46 Aligned_cols=114 Identities=13% Similarity=0.145 Sum_probs=64.7
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCC-ceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCch-hHH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKN-ILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIE-KIF 272 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~-~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~-~v~ 272 (505)
+.+.+.|+|++++|=+-. +++.++.+.+++.|-+ +.+++-. ...+.+++|++.+.|....-.=.|+ .|.. .++
T Consensus 113 ~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~~i~liap~---s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~~~~ 187 (271)
T 1ujp_A 113 GLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLETVFLLAPT---STDARIATVVRHATGFVYAVSVTGV-TGMRERLP 187 (271)
T ss_dssp HHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCEEECEECTT---CCHHHHHHHHTTCCSCEEEECC------------
T ss_pred HHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCceEEEeCCC---CCHHHHHHHHHhCCCCEEEEecCcc-cCCCCCCC
Confidence 556778999999987654 6777788888776643 3344332 3456889999988765543211111 1111 111
Q ss_pred HHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 273 LAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 273 ~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.-....++..+++ +.|+++..- .=|...+. . + .|+|+++..
T Consensus 188 ~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e~a~---~-~-~~ADgVIVG 229 (271)
T 1ujp_A 188 EEVKDLVRRIKARTALPVAVGFG---------VSGKATAA---Q-A-AVADGVVVG 229 (271)
T ss_dssp -CCHHHHHHHHTTCCSCEEEESC---------CCSHHHHH---H-H-TTSSEEEEC
T ss_pred ccHHHHHHHHHhhcCCCEEEEcC---------CCCHHHHH---H-h-cCCCEEEEC
Confidence 1112344555554 789987654 33344333 3 3 799999984
No 166
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=58.74 E-value=16 Score=34.06 Aligned_cols=115 Identities=9% Similarity=0.096 Sum_probs=59.4
Q ss_pred HHHHHhcccccCCCEEEEcC--CCChhHHHHHHHHHhccCCCce--EEEE-------ecCH-------HHHhcHHHHHhc
Q 010627 190 KEDILKWGIPNQIDMIALSF--VRKGSDLVGVRKLLGGHAKNIL--LMSK-------VENQ-------EGVANFDDILAN 251 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sf--V~sa~dv~~v~~~l~~~~~~~~--Iiak-------IEt~-------~av~nldeI~~~ 251 (505)
.+++ +.+++.|+|.|.+.. ..+++.+.++.+.++ .++. +=++ +.+. ..++.++...+.
T Consensus 86 ~~~~-~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g---~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 86 DESL-AAALATGCARVNVGTAALENPQWCARVIGEHG---DQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp HHHH-HHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG---GGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred HHHH-HHHHHcCCCEEEECchHhhChHHHHHHHHHcC---CCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 3456 667788999998763 244444555555443 2211 1122 2221 124444555555
Q ss_pred -CCeeEEecCccc---CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHc---CCcee
Q 010627 252 -SDAFMVARGDLG---MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCV 324 (505)
Q Consensus 252 -sDgImIaRgDLg---~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~---G~D~i 324 (505)
+|.|++-..+.. ....++.+. ++ +...+.|++...- .-+. .|+..+... |+|++
T Consensus 162 G~~~i~~~~~~~~~~~~g~~~~~~~----~l---~~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gad~v 222 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGPNLDLLA----GV---ADRTDAPVIASGG---------VSSL---DDLRAIATLTHRGVEGA 222 (244)
T ss_dssp TCCCEEEEETTTTTTTSCCCHHHHH----HH---HTTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEEE
T ss_pred CCCEEEEEecCCccccCCCCHHHHH----HH---HHhCCCCEEEECC---------CCCH---HHHHHHHhhccCCCCEE
Confidence 688887432322 122222222 22 2345889987543 3333 455555555 99999
Q ss_pred eec
Q 010627 325 MLS 327 (505)
Q Consensus 325 mLs 327 (505)
|+.
T Consensus 223 ~vG 225 (244)
T 2y88_A 223 IVG 225 (244)
T ss_dssp EEC
T ss_pred EEc
Confidence 995
No 167
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=58.37 E-value=47 Score=31.05 Aligned_cols=133 Identities=8% Similarity=-0.047 Sum_probs=78.1
Q ss_pred ccccCCCEEEEcCCCChhHHHHHHHHHhccCCC--ceEEEEecCHHHHhcHHHHHh-cCCeeEEecCccc----CcCCch
Q 010627 197 GIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKN--ILLMSKVENQEGVANFDDILA-NSDAFMVARGDLG----MEIPIE 269 (505)
Q Consensus 197 al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~--~~IiakIEt~~av~nldeI~~-~sDgImIaRgDLg----~e~~~~ 269 (505)
+.+.|+|++.+......+.++++++.+++.|.. ..-++.+-+. ..+.+.++++ -.|-+.+.++-++ +-.+.+
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 466899999998777777799999988776632 2334444422 3455666665 3466666555443 222333
Q ss_pred hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 270 KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 270 ~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
++..+++. | ..+.++.+..-+ .|. ++..++..|+|.++...--.....|.++++.+.+..+
T Consensus 157 e~~~ir~~----~-~~~~~i~v~gGI--------~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 157 DLNKVKKL----I-EMGFRVSVTGGL--------SVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHHH----H-HHTCEEEEESSC--------CGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHh----h-cCCceEEEECCC--------CHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 44433332 2 234444442221 222 2235677899999986543345679998888776543
No 168
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=58.30 E-value=67 Score=31.26 Aligned_cols=99 Identities=13% Similarity=0.098 Sum_probs=60.3
Q ss_pred HHHHHhcccc-cCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEE
Q 010627 190 KEDILKWGIP-NQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMV 257 (505)
Q Consensus 190 ~~di~~~al~-~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImI 257 (505)
.+.+.++.++ .|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+
T Consensus 26 l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 105 (293)
T 1f6k_A 26 LRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSA 105 (293)
T ss_dssp HHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 3333378889 999999862 3344444444433 3444456789999984 36777666655544 699998
Q ss_pred ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 258 ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 258 aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.+-... ....+.+...-+.|.+ +.+.|+++-
T Consensus 106 ~~P~y~-~~~~~~l~~~f~~va~---a~~lPiilY 136 (293)
T 1f6k_A 106 VTPFYY-KFSFPEIKHYYDTIIA---ETGSNMIVY 136 (293)
T ss_dssp ECCCSS-CCCHHHHHHHHHHHHH---HHCCCEEEE
T ss_pred CCCCCC-CCCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 654432 1234455555555544 457898863
No 169
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=58.24 E-value=19 Score=35.25 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=65.1
Q ss_pred hcHHHHHhcccccCCC---EEEEcCC-----------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc--
Q 010627 188 KDKEDILKWGIPNQID---MIALSFV-----------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-- 251 (505)
Q Consensus 188 ~D~~di~~~al~~g~d---~V~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 251 (505)
.|.....+.+.+.|+| +|-+.|- .+.+.+.++-+.+++. .+.+|+.|+=.-...+.+.++++.
T Consensus 106 ~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~~ 184 (314)
T 2e6f_A 106 EENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVLN 184 (314)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 4444443667778899 8888653 1444443333333322 146789997421112233333321
Q ss_pred ----CCeeEEecCc---ccCc-------C----------CchhHHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCC
Q 010627 252 ----SDAFMVARGD---LGME-------I----------PIEKIFLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPT 306 (505)
Q Consensus 252 ----sDgImIaRgD---Lg~e-------~----------~~~~v~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~pt 306 (505)
+|+|.+.-.. +..+ + +....+.....+-+..... ..|+|...-+-
T Consensus 185 ~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~---------- 254 (314)
T 2e6f_A 185 EFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVY---------- 254 (314)
T ss_dssp TCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCC----------
T ss_pred hcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCC----------
Confidence 6777653211 0000 0 1111233333333333444 78888654432
Q ss_pred hHHHHHHHHHHHcCCceeeecc
Q 010627 307 RAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 307 raEv~Dv~nav~~G~D~imLs~ 328 (505)
...|+..++..|+|++++..
T Consensus 255 --~~~da~~~l~~GAd~V~ig~ 274 (314)
T 2e6f_A 255 --SGEDAFLHILAGASMVQVGT 274 (314)
T ss_dssp --SHHHHHHHHHHTCSSEEECH
T ss_pred --CHHHHHHHHHcCCCEEEEch
Confidence 23567777888999999963
No 170
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=57.78 E-value=24 Score=37.03 Aligned_cols=99 Identities=12% Similarity=0.091 Sum_probs=59.8
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCCCC------------------------hhHHHHHHHHHhccCCCceEEE--Ee
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFVRK------------------------GSDLVGVRKLLGGHAKNILLMS--KV 236 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV~s------------------------a~dv~~v~~~l~~~~~~~~Iia--kI 236 (505)
|.+++.|..++.+.+.+.|+|+|.++.-.. .+-+.++++.+ +.++.||+ -|
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v---~~~iPVIg~GGI 382 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT---NKQIPIIASGGI 382 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHT---TTCSCEEEESSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHc---CCCCcEEEECCC
Confidence 346766777776788899999999986421 12233333333 34678887 47
Q ss_pred cCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 010627 237 ENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 237 Et~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkp 288 (505)
.|++-. .+-|..-+|+|+++|+=+-- +..-+..+.+.+-....+.|..
T Consensus 383 ~s~~DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 383 FSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp CSHHHH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCCC
Confidence 776544 34444458999999986521 2223334445555555555543
No 171
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=57.64 E-value=28 Score=34.31 Aligned_cols=97 Identities=7% Similarity=0.078 Sum_probs=57.2
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHH-HHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVR-KLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~-~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +--|.++=.++- ...+..+.+++||+-+ -+.++++......+. +|++|+.+-
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 33378889999999764 222334433333 3344446678999988 345666655555444 699999754
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- ...+.+... .-..|.+.+.|+++-
T Consensus 120 ~y~~-~s~~~l~~~---f~~va~a~~lPiilY 147 (304)
T 3l21_A 120 YYSK-PPQRGLQAH---FTAVADATELPMLLY 147 (304)
T ss_dssp CSSC-CCHHHHHHH---HHHHHTSCSSCEEEE
T ss_pred CCCC-CCHHHHHHH---HHHHHHhcCCCEEEE
Confidence 3322 233444444 444445558999864
No 172
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=57.00 E-value=51 Score=32.36 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=60.3
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++......+. +|++|+.+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 33378889999999863 3344444444433 3444456789999984 46777766665554 799998654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcC-CCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQG-KPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~g-kpvi~A 292 (505)
...- .+.+.+...-+.|.++ .+ .|+++-
T Consensus 116 ~y~~-~s~~~l~~~f~~va~a---~~~lPiilY 144 (303)
T 2wkj_A 116 FYYP-FSFEEHCDHYRAIIDS---ADGLPMVVY 144 (303)
T ss_dssp CSSC-CCHHHHHHHHHHHHHH---HTTCCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHHHh---CCCCCEEEE
Confidence 4321 2445665555666554 45 898863
No 173
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=56.46 E-value=45 Score=30.15 Aligned_cols=60 Identities=13% Similarity=0.223 Sum_probs=41.2
Q ss_pred EecCCCEEEEEec----CCCCCCccEEEecchhhhc--ccCCCCEEEEe--CCeEEEEEEEEeeeCCeEE
Q 010627 97 QLKQGQEITISTD----YTIKGDENMICMSYKKLAV--DVQPGSVILCS--DGTISFTVLECNVKAGLVK 158 (505)
Q Consensus 97 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~i~l~V~~v~~~~~~i~ 158 (505)
-++.|++++|+.. |...+......++-..|.. .+++|+.+.+. +|.+..+|++ ++++.++
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~--v~~~~V~ 118 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITA--VEDDHVV 118 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEE--ECSSEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEE--EcCCEEE
Confidence 3679999998875 3333444555677666654 68999999996 5776667774 4666655
No 174
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=56.39 E-value=75 Score=32.15 Aligned_cols=108 Identities=11% Similarity=0.136 Sum_probs=73.6
Q ss_pred hcccccCCCEEEEcCCC-----------ChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCccc
Q 010627 195 KWGIPNQIDMIALSFVR-----------KGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLG 263 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~-----------sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg 263 (505)
+.+.+.|+|++-+-+-. ..+.++.+++++.+.| +.+++-+-.+..++-+.+ ..|.+-||-+++-
T Consensus 127 ~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~G--l~~~te~~d~~~~~~l~~---~vd~lkIgAr~~~ 201 (350)
T 1vr6_A 127 HFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYG--MYVVTEALGEDDLPKVAE---YADIIQIGARNAQ 201 (350)
T ss_dssp HHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHH---HCSEEEECGGGTT
T ss_pred HHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcC--CcEEEEeCCHHHHHHHHH---hCCEEEECccccc
Confidence 66677888876432211 1477888888887654 789998887777766655 4799999976663
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH-cCCceeee
Q 010627 264 MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVML 326 (505)
Q Consensus 264 ~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~-~G~D~imL 326 (505)
. ..+++++.+.||||++.|-|- .|-.|+...++++. .|.+-++|
T Consensus 202 n-----------~~LL~~va~~~kPVilk~G~~--------~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 202 N-----------FRLLSKAGSYNKPVLLKRGFM--------NTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp C-----------HHHHHHHHTTCSCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEE
T ss_pred C-----------HHHHHHHHccCCcEEEcCCCC--------CCHHHHHHHHHHHHHCCCCeEEE
Confidence 1 223445557899999966542 47788888888664 57655555
No 175
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=56.00 E-value=32 Score=34.14 Aligned_cols=155 Identities=16% Similarity=0.074 Sum_probs=91.8
Q ss_pred CCCChhcHHHHHhccc-ccCCCEEEEcCCCChhHHHHHHHHHhccC---CCceEEEEecCHHHHhcHHHHHh-----c--
Q 010627 183 PTLTEKDKEDILKWGI-PNQIDMIALSFVRKGSDLVGVRKLLGGHA---KNILLMSKVENQEGVANFDDILA-----N-- 251 (505)
Q Consensus 183 ~~lte~D~~di~~~al-~~g~d~V~~sfV~sa~dv~~v~~~l~~~~---~~~~IiakIEt~~av~nldeI~~-----~-- 251 (505)
|..|+.|.+.+.+-|. +.++..|+++ +..|..+++.|...+ .+++|.+=|=-|.|-...+..+. +
T Consensus 37 p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~ 112 (297)
T 4eiv_A 37 DGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD 112 (297)
T ss_dssp TTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 5667888777657777 6778878776 778999999997644 46888888866666554443332 1
Q ss_pred -CCee--EEecCcccCc--CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHH-HHHHHH-HHHcCCcee
Q 010627 252 -SDAF--MVARGDLGME--IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAE-ATDVAN-AVLDGTDCV 324 (505)
Q Consensus 252 -sDgI--mIaRgDLg~e--~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraE-v~Dv~n-av~~G~D~i 324 (505)
+|.| +|..|-|-.. =.++.+..-.+.+.++|...-..||+-|-.| +..| +..... ++..|+|.|
T Consensus 113 GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADFV 183 (297)
T 4eiv_A 113 GADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADFL 183 (297)
T ss_dssp TCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSEE
T ss_pred CCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 2322 2233222110 0112333344566666643233457666655 3345 333333 677899998
Q ss_pred eecccCCCCCCHHHHHHHHHHHHHHH
Q 010627 325 MLSGETAAGAYPEVAVRTMAQICVEA 350 (505)
Q Consensus 325 mLs~Eta~G~yP~~~V~~m~~i~~~a 350 (505)
=-|.==..|.--++.|+.|.+.+++.
T Consensus 184 KTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 184 QTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp ECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 76533333344679999999998653
No 176
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=55.98 E-value=17 Score=33.93 Aligned_cols=69 Identities=16% Similarity=0.153 Sum_probs=42.2
Q ss_pred cHHHHHhcccccCCCEEEEc-----CCCChhHHHHHHHHHhccCCCceEEE--EecCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 189 DKEDILKWGIPNQIDMIALS-----FVRKGSDLVGVRKLLGGHAKNILLMS--KVENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~s-----fV~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-sDgImIaRg 260 (505)
|...+.+...+.|+|++.+. |...... ..++++.+.. ++++++ .|.+++- +++.++. +|+|++++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~---~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDES---LAAALATGCARVNVGTA 105 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHH---HHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHHH---HHHHHHcCCCEEEECch
Confidence 44444466678899999883 5555533 3334333322 456665 4677653 5555655 799999987
Q ss_pred ccc
Q 010627 261 DLG 263 (505)
Q Consensus 261 DLg 263 (505)
.|.
T Consensus 106 ~l~ 108 (244)
T 2y88_A 106 ALE 108 (244)
T ss_dssp HHH
T ss_pred Hhh
Confidence 653
No 177
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=55.86 E-value=17 Score=30.32 Aligned_cols=41 Identities=32% Similarity=0.427 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG---------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 45666778889999999998763 788999988887 999864
No 178
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=55.85 E-value=53 Score=32.06 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=58.9
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+.+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33378889999999863 2334444444433 3444456789999884 46677666655544 699998654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 105 ~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK-PTQRGLYEHFKTV---AQEVDIPIIIY 132 (294)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4321 2334444444444 55568999863
No 179
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=55.59 E-value=86 Score=29.32 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=63.1
Q ss_pred HHHHHhcccccCCCEEEEcCC-------CChhHHHHHHHHHhccCCCceEEEE-ec------CHHHHhcHHHHHhc----
Q 010627 190 KEDILKWGIPNQIDMIALSFV-------RKGSDLVGVRKLLGGHAKNILLMSK-VE------NQEGVANFDDILAN---- 251 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV-------~sa~dv~~v~~~l~~~~~~~~Iiak-IE------t~~av~nldeI~~~---- 251 (505)
..+..+.+.++|+|+|=+... .+.+++.++++.+.+.|-.+..++- .. ..+.++.+...++.
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~l 96 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWF 96 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 333338888999999987432 2357888999999887755443321 10 12334444444443
Q ss_pred -CCeeEEecCcccCcCC----chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHH
Q 010627 252 -SDAFMVARGDLGMEIP----IEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAV 317 (505)
Q Consensus 252 -sDgImIaRgDLg~e~~----~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav 317 (505)
++.|.+..|...-... ++.+...-+++.+.|.++|..+.+ |.+-.+...|..++.++...+
T Consensus 97 G~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 97 KTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL-----ETHPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp TCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSTTSSHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE-----ecCCCcCcCCHHHHHHHHHhc
Confidence 2455554443322111 123334445566666666665443 222222334445554444443
No 180
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=55.38 E-value=49 Score=32.18 Aligned_cols=97 Identities=10% Similarity=-0.005 Sum_probs=58.9
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+.+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33378889999999763 2234444444333 3444456789999984 36677666655544 799998654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 105 ~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK-PTQEGLRKHFGKV---AESINLPIVLY 132 (289)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4321 2344554444544 44568998863
No 181
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=55.32 E-value=13 Score=39.35 Aligned_cols=50 Identities=16% Similarity=0.265 Sum_probs=40.9
Q ss_pred eEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 17 TKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 17 tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
..+.+.+|......+.++.++++|++++=||++||..+...+.++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 34556677766678899999999999999999999987777778877764
No 182
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=55.17 E-value=15 Score=39.09 Aligned_cols=50 Identities=16% Similarity=0.341 Sum_probs=42.5
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHH
Q 010627 16 KTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRT 65 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~ 65 (505)
+..+-+.+|+.....+.++.|+++|+++.=+|.+||..+...+.++.+|+
T Consensus 244 rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 244 RLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 45667788888778899999999999999999999988887777777775
No 183
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=54.28 E-value=35 Score=33.86 Aligned_cols=98 Identities=11% Similarity=0.135 Sum_probs=57.8
Q ss_pred HHHHhcccccCCCEEEEc------CCCChhHHHH-HHHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEec
Q 010627 191 EDILKWGIPNQIDMIALS------FVRKGSDLVG-VRKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~s------fV~sa~dv~~-v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaR 259 (505)
+.+.++.++.|+|++++. +-=|.++=.+ ++...+..+.+++||+-+= +.++++......+. +|++|+.+
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 333378889999999742 1123333333 3333444456788999873 56666666555554 69999865
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-... ..+.+.+...-+.| |.+.+.|+++-
T Consensus 126 P~y~-~~~~~~l~~~f~~v---a~a~~lPiilY 154 (315)
T 3si9_A 126 PYYN-RPNQRGLYTHFSSI---AKAISIPIIIY 154 (315)
T ss_dssp CCSS-CCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCC-CCCHHHHHHHHHHH---HHcCCCCEEEE
Confidence 4432 12334544444444 44558999874
No 184
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=54.18 E-value=27 Score=28.93 Aligned_cols=41 Identities=37% Similarity=0.536 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG---------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAP-CPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCC-CCEEEe
Confidence 45666778899999999998874 678888888865 999987
No 185
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=54.10 E-value=39 Score=30.97 Aligned_cols=124 Identities=10% Similarity=0.120 Sum_probs=67.7
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHH----HhcHHHHHhc-----CCeeEEecCcccCc
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEG----VANFDDILAN-----SDAFMVARGDLGME 265 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a----v~nldeI~~~-----sDgImIaRgDLg~e 265 (505)
+...+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 72 ~~~~~~Gad~vtvh~~~g~~~i~~~~~----~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~----- 141 (208)
T 2czd_A 72 RKVFGAGADYVIVHTFVGRDSVMAVKE----LG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT----- 141 (208)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHT----TS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS-----
T ss_pred HHHHhcCCCEEEEeccCCHHHHHHHHH----hC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC-----
Confidence 455688999998887666655555443 22 4555555433221 3344555443 366655421
Q ss_pred CCchhHHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHH
Q 010627 266 IPIEKIFLAQKVMIYKCNIQG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMA 344 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~~g-kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~ 344 (505)
..+++..+++ .+ + .++++..- ..+. -.++..++..|+|.+..+.--.....|.++++.++
T Consensus 142 -~~~~i~~lr~----~~---~~~~~iv~gG--------I~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~ 202 (208)
T 2czd_A 142 -RPERIGYIRD----RL---KEGIKILAPG--------IGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIY 202 (208)
T ss_dssp -STHHHHHHHH----HS---CTTCEEEECC--------CCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHH
T ss_pred -ChHHHHHHHH----hC---CCCeEEEECC--------CCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHH
Confidence 2234433322 22 3 35554321 1221 12456677789999998644434456988888876
Q ss_pred HHH
Q 010627 345 QIC 347 (505)
Q Consensus 345 ~i~ 347 (505)
+.+
T Consensus 203 ~~i 205 (208)
T 2czd_A 203 DEI 205 (208)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 186
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=53.99 E-value=1.3e+02 Score=27.34 Aligned_cols=114 Identities=11% Similarity=0.134 Sum_probs=67.0
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCH---------HHHhcHHHHHhc-CCee
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQ---------EGVANFDDILAN-SDAF 255 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~---------~av~nldeI~~~-sDgI 255 (505)
...+...+.+.+.+.|++++.+ .+++.++++++.. +.+++..+-+. .-.+.++..++. +|.+
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v 92 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVI 92 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CCccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEE
Confidence 3345555546677889999865 5788888888765 23343221110 012334444444 6999
Q ss_pred EEecCcccCcCCchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 256 MVARGDLGMEIPIEKIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 256 mIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.++-.++. -|.+.+ .++++.+++. |+++++-. .|..| ...+...|+|.++++
T Consensus 93 ~l~~~~~~--~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 93 ALDATLQQ--RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp EEECSCSC--CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECT
T ss_pred EEeeeccc--CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeC
Confidence 88754431 111122 4677777777 88876521 23333 445778999999875
No 187
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=53.85 E-value=36 Score=34.25 Aligned_cols=99 Identities=7% Similarity=0.035 Sum_probs=60.3
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEe
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIa 258 (505)
.+.+.++.++.|+|+|++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+.
T Consensus 54 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 54 TAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp HHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3334478889999999763 3334444444433 3444456789999984 46777666655544 6999986
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 134 ~P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 163 (343)
T 2v9d_A 134 NPYYWK-VSEANLIRYFEQV---ADSVTLPVMLY 163 (343)
T ss_dssp CCSSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 544321 2334554444444 45568999863
No 188
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=53.78 E-value=1.5e+02 Score=30.98 Aligned_cols=186 Identities=18% Similarity=0.049 Sum_probs=111.0
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC----C-----CChhHHHHHHHHHhccCCCceEEEEec--CHHHHh---------
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF----V-----RKGSDLVGVRKLLGGHAKNILLMSKVE--NQEGVA--------- 243 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf----V-----~sa~dv~~v~~~l~~~~~~~~IiakIE--t~~av~--------- 243 (505)
.++..|+..|.+...+.|++.|=+-+ + -++++.+.++.+-+. ..++++.+.+= +..|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 46767766664666678999987753 1 145666666554432 24556655552 222321
Q ss_pred cHHHHHhc-CCeeEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHc
Q 010627 244 NFDDILAN-SDAFMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLD 319 (505)
Q Consensus 244 nldeI~~~-sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~ 319 (505)
+++..++. .|.|-| +-.|+ .-.+..++.++++|+.|..+= |+...+.-+...+.+++. +...
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDV----------RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcCEEEEEEecCHH----------HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHC
Confidence 23443333 465544 22232 234678999999999885432 344445556777777777 6678
Q ss_pred CCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCC
Q 010627 320 GTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRG 399 (505)
Q Consensus 320 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~s 399 (505)
|+|.|.| .+|+=+-.|-++-+.+..+.++..-.+.. |+ ++ .--+|.+...+|-+.+|+ +|=-|-+
T Consensus 171 Gad~I~l-~DT~G~~~P~~v~~lv~~l~~~~~~~i~~--H~----------Hn-d~GlAvAN~laAv~AGa~-~VD~ti~ 235 (464)
T 2nx9_A 171 GVDSIAL-KDMAGILTPYAAEELVSTLKKQVDVELHL--HC----------HS-TAGLADMTLLKAIEAGVD-RVDTAIS 235 (464)
T ss_dssp TCSEEEE-EETTSCCCHHHHHHHHHHHHHHCCSCEEE--EE----------CC-TTSCHHHHHHHHHHTTCS-EEEEBCG
T ss_pred CCCEEEE-cCCCCCcCHHHHHHHHHHHHHhcCCeEEE--EE----------CC-CCChHHHHHHHHHHhCCC-EEEEecc
Confidence 9999999 68888889999988888877654211111 11 11 112355556667778888 4444443
No 189
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=53.55 E-value=48 Score=32.77 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=55.4
Q ss_pred HHHhcccccCCCEEEEcC------CCChhHHHHH-HHHHhccCCCceEEEEec--CHHHHhcHHHHHhc-CCeeEEecCc
Q 010627 192 DILKWGIPNQIDMIALSF------VRKGSDLVGV-RKLLGGHAKNILLMSKVE--NQEGVANFDDILAN-SDAFMVARGD 261 (505)
Q Consensus 192 di~~~al~~g~d~V~~sf------V~sa~dv~~v-~~~l~~~~~~~~IiakIE--t~~av~nldeI~~~-sDgImIaRgD 261 (505)
.+.++.++.|+|++++.= .-|.++=.++ +...+..+.+++||+-+= +.++++......+. +|++|+.+-.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 333788899999987532 1133333333 333444456789999883 33344433333333 6999996433
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
. .....+.+...-+.|.+++ +.|+++-
T Consensus 117 y-~~~s~~~l~~~f~~va~a~---~lPiilY 143 (316)
T 3e96_A 117 H-PYVTAGGVYAYFRDIIEAL---DFPSLVY 143 (316)
T ss_dssp C-SCCCHHHHHHHHHHHHHHH---TSCEEEE
T ss_pred C-CCCCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 3 2234455555555655554 7999874
No 190
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=53.47 E-value=28 Score=34.65 Aligned_cols=58 Identities=17% Similarity=0.319 Sum_probs=38.7
Q ss_pred CCCCCCHHHHHHHHHhCCcEEEEecCCCCH----------HHHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 24 GPASRSVPMIEKLLKAGMNVARFNFSHGSH----------EYHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 24 Gp~~~~~~~i~~li~~G~~~~RlN~shg~~----------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
|+...+.+.++.|-+.|+|++||-++.... +...+.++.+=+.+.+.| +.+++|+-..
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vildlH~~ 106 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 106 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCSC
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCc
Confidence 334457899999999999999999875431 233344444444444556 5688898754
No 191
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=53.16 E-value=41 Score=31.87 Aligned_cols=106 Identities=14% Similarity=0.030 Sum_probs=63.5
Q ss_pred CEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCH----HHHhcHHHHHhc--CCeeEEecCcccCcCCchhHHHHHH
Q 010627 203 DMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQ----EGVANFDDILAN--SDAFMVARGDLGMEIPIEKIFLAQK 276 (505)
Q Consensus 203 d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~----~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk 276 (505)
..++.|| +.+.+..+++.. .++.+ +.+... .++..+-+.+.. .|.+-.. ...+-+
T Consensus 134 ~v~~~SF--~~~~l~~~~~~~----p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 194 (250)
T 3ks6_A 134 RTTFSSF--LLASMDELWKAT----TRPRL-WLVSPSVLQQLGPGAVIETAIAHSIHEIGVH------------IDTADA 194 (250)
T ss_dssp GEEEEES--CHHHHHHHHHHC----CSCEE-EEECHHHHHHHHHHHHHHHHHHTTCCEEEEE------------GGGCCH
T ss_pred CEEEEeC--CHHHHHHHHHHC----CCCcE-EEEecccccccchhHHHHHHHhcCCCEEecc------------hhhCCH
Confidence 5677888 567777777643 34443 333321 122222222222 2333221 122346
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHH
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQIC 347 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 347 (505)
..++.|+++|++|.+=|- -+ -.+...++..|+|+|+- .||..+.+.+.++-
T Consensus 195 ~~v~~~~~~G~~V~~WTv----------n~---~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~ 245 (250)
T 3ks6_A 195 GLMAQVQAAGLDFGCWAA----------HT---PSQITKALDLGVKVFTT-------DRPTLAIALRTEHR 245 (250)
T ss_dssp HHHHHHHHTTCEEEEECC----------CS---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeC----------CC---HHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhh
Confidence 889999999999988661 12 23556677789999986 68999888877653
No 192
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=53.10 E-value=1.7e+02 Score=28.70 Aligned_cols=111 Identities=14% Similarity=-0.002 Sum_probs=61.4
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEE--ecCHHHHhcHHHHHhc-CCeeEEecCcccCc
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSK--VENQEGVANFDDILAN-SDAFMVARGDLGME 265 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-sDgImIaRgDLg~e 265 (505)
+.+.. ..+.+.|.-+++.+---+++++.+.-+.+.+... ..+... +-++..-+.++.+++. +|.|.++-|+
T Consensus 39 ~~~la-~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~-~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~---- 112 (326)
T 3bo9_A 39 TPTLA-AAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTD-KPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN---- 112 (326)
T ss_dssp CHHHH-HHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCS-SCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC----
T ss_pred CHHHH-HHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcC-CCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 33444 5566777655554433467776655454544321 122222 2233333334444443 6999987553
Q ss_pred CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 266 IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 266 ~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
| ..+++.+++.|.|++... .+.. +...+...|+|++.+++
T Consensus 113 -p--------~~~~~~l~~~g~~v~~~v-----------~s~~---~a~~a~~~GaD~i~v~g 152 (326)
T 3bo9_A 113 -P--------TKYIRELKENGTKVIPVV-----------ASDS---LARMVERAGADAVIAEG 152 (326)
T ss_dssp -C--------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred -c--------HHHHHHHHHcCCcEEEEc-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 3 234566778899988621 2333 34456778999999965
No 193
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=53.08 E-value=17 Score=38.37 Aligned_cols=51 Identities=16% Similarity=0.308 Sum_probs=42.3
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 16 KTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+..+-+.+|...++.+.+++|+++|++++=||.+||..+...+.++.+|+.
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 445556778777788999999999999999999999988777777777764
No 194
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=52.64 E-value=2e+02 Score=29.20 Aligned_cols=142 Identities=11% Similarity=0.091 Sum_probs=91.7
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe-cCHHHHhcHHHHHhcCCeeEEecCcccCcCC
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV-ENQEGVANFDDILANSDAFMVARGDLGMEIP 267 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~sDgImIaRgDLg~e~~ 267 (505)
-.+.| +...+.|+|.|-++. .+.++.+.++.+-.. .+++++|=| -++.-. +..+-.-.|.+=|.||.+|-
T Consensus 48 tv~Qi-~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~la--l~a~e~G~dklRINPGNig~--- 118 (366)
T 3noy_A 48 TLNQI-KRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYA--FLSMEKGVHGIRINPGNIGK--- 118 (366)
T ss_dssp HHHHH-HHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHH--HHHHHTTCSEEEECHHHHSC---
T ss_pred HHHHH-HHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHH--HHHHHhCCCeEEECCcccCc---
Confidence 34445 555678999998875 557777777665543 368999988 443222 22333338999999999984
Q ss_pred chhHHHHHHHHHHHHHHcCCCeEE-------ehhhhHhhhcCCCCChHHH-----HHHHHHHHcCCceeeecccCCCCCC
Q 010627 268 IEKIFLAQKVMIYKCNIQGKPVVT-------ATQMLESMIKSPRPTRAEA-----TDVANAVLDGTDCVMLSGETAAGAY 335 (505)
Q Consensus 268 ~~~v~~~qk~Ii~~~~~~gkpvi~-------ATqmLeSM~~~~~ptraEv-----~Dv~nav~~G~D~imLs~Eta~G~y 335 (505)
.++ -+.++++|+++|+|+=+ -..+|+.+- .||...+ ..+.-+-..|+|-+.+|--.+ .
T Consensus 119 ~~~----~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S---~ 188 (366)
T 3noy_A 119 EEI----VREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSIKGS---D 188 (366)
T ss_dssp HHH----HHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS---S
T ss_pred hhH----HHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC---C
Confidence 223 36799999999999844 356666542 2443322 223346667999999986544 4
Q ss_pred HHHHHHHHHHHHHH
Q 010627 336 PEVAVRTMAQICVE 349 (505)
Q Consensus 336 P~~~V~~m~~i~~~ 349 (505)
+..+|+.-+.+.+.
T Consensus 189 v~~~i~ayr~la~~ 202 (366)
T 3noy_A 189 VLQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 66666665555544
No 195
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=52.23 E-value=52 Score=32.86 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=60.1
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEe
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIa 258 (505)
.+.+.++.++.|+|+|++. +.-|.++=.++ +...+..+.+++||+-+= +.++++....-.+. +||+|+.
T Consensus 57 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 57 FSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLA 136 (332)
T ss_dssp HHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3344478889999999763 23344444444 333444456789999884 36777666655544 7999996
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 137 ~P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 166 (332)
T 2r8w_A 137 PVSYTP-LTQEEAYHHFAAV---AGATALPLAIY 166 (332)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 544321 2334555444555 44568998863
No 196
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=51.92 E-value=67 Score=31.54 Aligned_cols=99 Identities=10% Similarity=0.136 Sum_probs=60.4
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEe
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIa 258 (505)
.+.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+-
T Consensus 39 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~ 118 (304)
T 3cpr_A 39 GREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVV 118 (304)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3344478889999999863 3344444444433 3444456789999984 46777766665554 6999986
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 119 ~P~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 148 (304)
T 3cpr_A 119 TPYYSK-PSQEGLLAHFGAI---AAATEVPICLY 148 (304)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 544321 2334444444444 45568998863
No 197
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=51.84 E-value=54 Score=30.87 Aligned_cols=119 Identities=13% Similarity=0.078 Sum_probs=66.1
Q ss_pred CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCC---CCCCHHHHHHHHHHHHHHHhcccCchhhHHh
Q 010627 286 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETA---AGAYPEVAVRTMAQICVEAESTLDYGDVFKR 362 (505)
Q Consensus 286 gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta---~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~ 362 (505)
|.++.++|-. +--..+.++..-+.++..|+.+|+|.|-+----. .|+| -+..+-+..+.+++... .-+-.++.
T Consensus 52 ~~~v~v~~vi--gFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~-~lkvIlet 127 (220)
T 1ub3_A 52 HAPFRLVTVV--GFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQA-VLKVILET 127 (220)
T ss_dssp TCSSEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTS-EEEEECCG
T ss_pred CCCceEEEEe--cCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCC-CceEEEec
Confidence 4445555543 2223334566667899999999999985522111 2333 46777788877776542 11111110
Q ss_pred hhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchH-----HH---HHHh-hCCCCcEEEE
Q 010627 363 VMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGST-----AK---LVAK-YRPGMPILSV 418 (505)
Q Consensus 363 ~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t-----a~---~ls~-~RP~~pIiav 418 (505)
...+ +.-...++++|.+.+|+. +=|.+|.+ .. ++.+ ..+++||.+-
T Consensus 128 ------~~l~--~e~i~~a~~ia~eaGADf--VKTsTGf~~~gat~~dv~~m~~~vg~~v~Vkaa 182 (220)
T 1ub3_A 128 ------GYFS--PEEIARLAEAAIRGGADF--LKTSTGFGPRGASLEDVALLVRVAQGRAQVKAA 182 (220)
T ss_dssp ------GGSC--HHHHHHHHHHHHHHTCSE--EECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEE
T ss_pred ------CCCC--HHHHHHHHHHHHHhCCCE--EEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEE
Confidence 0112 233556788999999994 44554433 22 2222 2456777776
No 198
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=51.83 E-value=60 Score=31.70 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=57.1
Q ss_pred HHhcccccCCCEEEEcCC------CChhHHHHHH-HHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecCc
Q 010627 193 ILKWGIPNQIDMIALSFV------RKGSDLVGVR-KLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARGD 261 (505)
Q Consensus 193 i~~~al~~g~d~V~~sfV------~sa~dv~~v~-~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRgD 261 (505)
+.++.++.|+|++++.=- -|.++=.++- ...+..+.+++||+-+= +.++++......+. +|++|+.+-.
T Consensus 33 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 112 (297)
T 3flu_A 33 LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPY 112 (297)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 337888999999986322 1333333333 33344456789999874 56666666555544 6999986544
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.. ....+.+...-+.| |.+.+.|+++-
T Consensus 113 y~-~~~~~~l~~~f~~v---a~a~~lPiilY 139 (297)
T 3flu_A 113 YN-KPSQEGIYQHFKTI---AEATSIPMIIY 139 (297)
T ss_dssp SS-CCCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CC-CCCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 32 12334444444444 45558999874
No 199
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=51.55 E-value=17 Score=35.46 Aligned_cols=139 Identities=17% Similarity=0.103 Sum_probs=72.1
Q ss_pred HHHHHhcccccCCCEEEEcCCCChhH-HHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCc---
Q 010627 190 KEDILKWGIPNQIDMIALSFVRKGSD-LVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGME--- 265 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~sa~d-v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e--- 265 (505)
.+.+ +.+.+.|+|+|..+|+.+..+ ++.++ +.+..+.+++.+.+++-... ..-.-+|.|-+- |.=+..
T Consensus 90 ~~~~-~~~~~aGad~v~~~~~~~~~~~~~~~~----~~~~~i~l~~~v~~~~~~~~--a~~~Gad~I~v~-G~~~~g~~~ 161 (297)
T 2zbt_A 90 FVEA-MILEAIGVDFIDESEVLTPADEEHHID----KWKFKVPFVCGARNLGEALR--RIAEGAAMIRTK-GEAGTGNVV 161 (297)
T ss_dssp HHHH-HHHHHTTCSEEEEETTSCCSCSSCCCC----GGGCSSCEEEEESSHHHHHH--HHHTTCSEEEEC-CCSSSCCTH
T ss_pred HHHH-HHHHHCCCCEEeeeCCCChHHHHHHHH----HhCCCceEEeecCCHHHHHH--HHHcCCCEEEEc-ccccCcchH
Confidence 3455 667789999998787654432 22222 22235778877777664432 222235776552 210000
Q ss_pred ------------------C-Cchh------HHHHHHHHHHHHHHcCCCeE--EehhhhHhhhcCCCCChHHHHHHHHHHH
Q 010627 266 ------------------I-PIEK------IFLAQKVMIYKCNIQGKPVV--TATQMLESMIKSPRPTRAEATDVANAVL 318 (505)
Q Consensus 266 ------------------~-~~~~------v~~~qk~Ii~~~~~~gkpvi--~ATqmLeSM~~~~~ptraEv~Dv~nav~ 318 (505)
+ |... .+.....+-+.+...+.|++ ...- .-+. .|+..+..
T Consensus 162 e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GG---------I~~~---e~i~~~~~ 229 (297)
T 2zbt_A 162 EAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGG---------IATP---ADAALMMH 229 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSS---------CCSH---HHHHHHHH
T ss_pred HHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCC---------CCCH---HHHHHHHH
Confidence 0 0000 00001222223334577765 3222 2232 46666777
Q ss_pred cCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 319 DGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 319 ~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
.|+|++++..--.....|.++++.+.+.+.
T Consensus 230 aGadgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 230 LGMDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp TTCSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred cCCCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 899999995332222468888888876654
No 200
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=51.53 E-value=2.1e+02 Score=28.98 Aligned_cols=155 Identities=15% Similarity=0.070 Sum_probs=98.9
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC-CCChhHHHHHHHHHhccCCCceEEEEe-cCHHHHhcHHHHHhc-CC--eeEEe
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF-VRKGSDLVGVRKLLGGHAKNILLMSKV-ENQEGVANFDDILAN-SD--AFMVA 258 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf-V~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~-sD--gImIa 258 (505)
.++..|+..|.+...+.|+|.|=+.| ..++.+.+.++.+. +.+.+..+.+.. .+++. ++..++. .| .++++
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~~a~~~g~~~v~i~~~ 96 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLA-SLGLKAKVVTHIQCRLDA---AKVAVETGVQGIDLLFG 96 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HHHHHHTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHH-hcCCCcEEEEEcccChhh---HHHHHHcCCCEEEEEec
Confidence 45778888875666778999999866 45666666666544 445556666543 22333 3333332 46 34444
Q ss_pred cCcccCc---CCchhHHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCC
Q 010627 259 RGDLGME---IPIEKIFLAQKVMIYKCNIQG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAG 333 (505)
Q Consensus 259 RgDLg~e---~~~~~v~~~qk~Ii~~~~~~g--kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G 333 (505)
-.|+-.. ...++.....+..++.++++| ..+.+. +...++-+...+.+++.++.+-+|.|.| .+|.=.
T Consensus 97 ~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~------~ed~~~~~~~~~~~~~~~~~~~a~~i~l-~DT~G~ 169 (382)
T 2ztj_A 97 TSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS------AEDTFRSEEQDLLAVYEAVAPYVDRVGL-ADTVGV 169 (382)
T ss_dssp C--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE------ETTTTTSCHHHHHHHHHHHGGGCSEEEE-EETTSC
T ss_pred cCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE------EEeCCCCCHHHHHHHHHHHHHhcCEEEe-cCCCCC
Confidence 4452222 234566667788999999999 555432 2234566677788888876666999999 688888
Q ss_pred CCHHHHHHHHHHHHHH
Q 010627 334 AYPEVAVRTMAQICVE 349 (505)
Q Consensus 334 ~yP~~~V~~m~~i~~~ 349 (505)
-.|-++-+.+..+.+.
T Consensus 170 ~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 170 ATPRQVYALVREVRRV 185 (382)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 8899988888877654
No 201
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=51.39 E-value=48 Score=32.49 Aligned_cols=97 Identities=11% Similarity=0.138 Sum_probs=58.8
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++......+. +|++|+.+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33378889999999752 2344444444433 3444455788999884 36777666665554 799999654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 105 ~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR-PSQEGLYQHFKMV---HDAIDIPIIVY 132 (297)
T ss_dssp TTTC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4321 2334544444444 44558898863
No 202
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=51.29 E-value=53 Score=32.04 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=62.7
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCC-CceEEEEe-------c--CHHHHhcHHHHHhcCCeeEE
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAK-NILLMSKV-------E--NQEGVANFDDILANSDAFMV 257 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakI-------E--t~~av~nldeI~~~sDgImI 257 (505)
.|.+.+.+.+.+.|++.++++- .+.++...+.++..+... ...+++-+ . +.+.++.+++.++....+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 4666665889999999888774 467777777776654321 12244433 1 12335556665544334444
Q ss_pred ecCcccCcCCch-hHHH----HHHHHHHHHHHcCCCeEEeh
Q 010627 258 ARGDLGMEIPIE-KIFL----AQKVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 258 aRgDLg~e~~~~-~v~~----~qk~Ii~~~~~~gkpvi~AT 293 (505)
|..|.+.... .-.. +-++.++.|++.|+|+++-|
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~ 134 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHE 134 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 6777665431 1122 33577888999999999854
No 203
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=51.25 E-value=47 Score=34.12 Aligned_cols=88 Identities=10% Similarity=0.207 Sum_probs=54.4
Q ss_pred hHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 214 SDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 214 ~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
++.+.++++.++.| +.+++-+=+.+++ |.+.+. .|.+=||-+|+.. ++ +++++.+.|||||+.
T Consensus 101 e~~~~L~~~~~~~G--i~~~stpfD~~sv---d~l~~~~vd~~KIgS~~~~N------~p-----LL~~va~~gKPViLS 164 (385)
T 1vli_A 101 EWILPLLDYCREKQ--VIFLSTVCDEGSA---DLLQSTSPSAFKIASYEINH------LP-----LLKYVARLNRPMIFS 164 (385)
T ss_dssp GGHHHHHHHHHHTT--CEEECBCCSHHHH---HHHHTTCCSCEEECGGGTTC------HH-----HHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHcC--CcEEEccCCHHHH---HHHHhcCCCEEEECcccccC------HH-----HHHHHHhcCCeEEEE
Confidence 44555555554432 4455533344444 333344 6888999888752 33 355666789999999
Q ss_pred hhhhHhhhcCCCCChHHHHHHHHHHHc-CC-ceeee
Q 010627 293 TQMLESMIKSPRPTRAEATDVANAVLD-GT-DCVML 326 (505)
Q Consensus 293 TqmLeSM~~~~~ptraEv~Dv~nav~~-G~-D~imL 326 (505)
|-| -|-+|+...++++.. |. +-++|
T Consensus 165 tGm---------aTl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 165 TAG---------AEISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp CTT---------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCC---------CCHHHHHHHHHHHHHCCCCcEEEE
Confidence 875 266899888887764 66 55555
No 204
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=51.23 E-value=25 Score=32.70 Aligned_cols=61 Identities=13% Similarity=0.203 Sum_probs=41.3
Q ss_pred EEecCCCEEEEEec----CCCCCCccEEEecchhhhc--ccCCCCEEEEe--CCeEEEEEEEEeeeCCeEE
Q 010627 96 IQLKQGQEITISTD----YTIKGDENMICMSYKKLAV--DVQPGSVILCS--DGTISFTVLECNVKAGLVK 158 (505)
Q Consensus 96 i~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~i~l~V~~v~~~~~~i~ 158 (505)
+-++.|++++|+.. |..........++-..|.. .+++|+.+.+. +|.+..+|+ +++++.|+
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~--~v~~~~V~ 118 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEIT--AVEDDHVV 118 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBC--CCCSSSEE
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEE--EEcCCEEE
Confidence 34789999999875 2233444456677666654 58999999987 566666677 45666654
No 205
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=51.17 E-value=51 Score=31.08 Aligned_cols=129 Identities=10% Similarity=0.084 Sum_probs=57.2
Q ss_pred HHHHHhcccccCCCEEEEcCCCChh--HHHHHHHHHhccC--C-Cce--EEE-------EecCHH--------HHhcHHH
Q 010627 190 KEDILKWGIPNQIDMIALSFVRKGS--DLVGVRKLLGGHA--K-NIL--LMS-------KVENQE--------GVANFDD 247 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~sa~--dv~~v~~~l~~~~--~-~~~--Iia-------kIEt~~--------av~nlde 247 (505)
.+++ ..+++.|+|+|.+.-.---. +...+++++...+ . .+. +=+ ++++.. ..+.+..
T Consensus 86 ~~~i-~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 86 MEHF-LEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp THHH-HHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred HHHH-HHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 3455 55677899999887432111 4555666665544 2 211 111 122211 1222333
Q ss_pred HHhc-CCeeEEec-CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceee
Q 010627 248 ILAN-SDAFMVAR-GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVM 325 (505)
Q Consensus 248 I~~~-sDgImIaR-gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~im 325 (505)
+.+. ++.|++-. .--|...+. .+ ..+-+.+...+.|++...- .-+.. |+..+...|+|+++
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~GG---------I~~~e---d~~~~~~~Gadgv~ 227 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSGY-DT----EMIRFVRPLTTLPIIASGG---------AGKME---HFLEAFLAGADAAL 227 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSCC-CH----HHHHHHGGGCCSCEEEESC---------CCSHH---HHHHHHHHTCSEEE
T ss_pred HHHcCCCEEEEEeecCCCCcCCC-CH----HHHHHHHHHcCCCEEEeCC---------CCCHH---HHHHHHHcCCHHHH
Confidence 3333 57777631 111112222 11 1222223345899987543 33334 45555557999999
Q ss_pred ecccCCCCCCH
Q 010627 326 LSGETAAGAYP 336 (505)
Q Consensus 326 Ls~Eta~G~yP 336 (505)
+..---.+.++
T Consensus 228 vgsal~~~~~~ 238 (266)
T 2w6r_A 228 AASVFHFREID 238 (266)
T ss_dssp ESTTTC-----
T ss_pred ccHHHHcCCCC
Confidence 96443334433
No 206
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=50.66 E-value=90 Score=31.17 Aligned_cols=127 Identities=18% Similarity=0.239 Sum_probs=66.8
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEcCC-------------CCh----------------hHHHHHHHHHhccC
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALSFV-------------RKG----------------SDLVGVRKLLGGHA 227 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~sfV-------------~sa----------------~dv~~v~~~l~~~~ 227 (505)
.||..|.+.+. +.+.+.|+|+|=+..- +.. +-++++|+.+ |
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~av---G 217 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVV---P 217 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHS---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHh---c
Confidence 57888777663 4677899999876433 221 2222333332 5
Q ss_pred CCceEEEEecC----------HHHHhcHHHHHhc-CCeeEEecCcccCc--CCchhHHHHHHHHHHHHH-HcCCCeEEeh
Q 010627 228 KNILLMSKVEN----------QEGVANFDDILAN-SDAFMVARGDLGME--IPIEKIFLAQKVMIYKCN-IQGKPVVTAT 293 (505)
Q Consensus 228 ~~~~IiakIEt----------~~av~nldeI~~~-sDgImIaRgDLg~e--~~~~~v~~~qk~Ii~~~~-~~gkpvi~AT 293 (505)
.+..|..||-- .++++-+..+.+. .|.|-+.-|....+ .+... ..+-..++..+ ..+.|++...
T Consensus 218 ~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~G 295 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAP--GFQVPFADAVRKRVGLRTGAVG 295 (349)
T ss_dssp TTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCT--TTTHHHHHHHHHHHCCEEEECS
T ss_pred CCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCc--cccHHHHHHHHHHcCceEEEEC
Confidence 66778888842 1222223333332 58888865433222 11100 01112222222 2478988644
Q ss_pred hhhHhhhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 294 QMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 294 qmLeSM~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
.+ -|.. +...++..| +|+|++.
T Consensus 296 gi---------~t~e---~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 296 LI---------TTPE---QAETLLQAGSADLVLLG 318 (349)
T ss_dssp SC---------CCHH---HHHHHHHTTSCSEEEES
T ss_pred CC---------CCHH---HHHHHHHCCCceEEEec
Confidence 32 2232 345677788 9999985
No 207
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=50.51 E-value=55 Score=31.87 Aligned_cols=95 Identities=12% Similarity=0.126 Sum_probs=57.1
Q ss_pred HHhcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecCc
Q 010627 193 ILKWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARGD 261 (505)
Q Consensus 193 i~~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRgD 261 (505)
+.++.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+= +.++++....-.+. +|++|+.+-.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (292)
T 2vc6_A 26 LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPY 105 (292)
T ss_dssp HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3378889999999752 23344444443 333444455788999884 36677666655544 6999986544
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
..- .+.+.+...-+.| |.+.+.|+++
T Consensus 106 y~~-~s~~~l~~~f~~i---a~a~~lPiil 131 (292)
T 2vc6_A 106 YNK-PTQEGIYQHFKAI---DAASTIPIIV 131 (292)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHCSSCEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCEEE
Confidence 321 2334444444444 4556899886
No 208
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=50.46 E-value=1.8e+02 Score=31.60 Aligned_cols=133 Identities=14% Similarity=0.215 Sum_probs=81.8
Q ss_pred eCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCcccCCc-------------------cccCCCCChhcHHHHHhcccc
Q 010627 139 SDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGV-------------------IVDLPTLTEKDKEDILKWGIP 199 (505)
Q Consensus 139 dDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgvnlp~~-------------------~~~l~~lte~D~~di~~~al~ 199 (505)
+++.+..+|. .+..+. .+-|.--++..+++|.. .+++.. +..|...+.++..+
T Consensus 159 ~~~~v~~~V~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~ 230 (606)
T 3t05_A 159 AKKEVKCDIL----NSGELK---NKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVR-RPSDVLEIREILEE 230 (606)
T ss_dssp TTTEEEEEEC----SCCEEE---TTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCC-SHHHHHHHHHHHHH
T ss_pred cCCEEEEEEE----ECeEEe---CCceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHh
Confidence 3456666665 333332 34466677788888852 112222 56788887445555
Q ss_pred cCCCEEEEcCCCChhHHHHHHHHHhc---------------------------------cCCCceEEE------EecCH-
Q 010627 200 NQIDMIALSFVRKGSDLVGVRKLLGG---------------------------------HAKNILLMS------KVENQ- 239 (505)
Q Consensus 200 ~g~d~V~~sfV~sa~dv~~v~~~l~~---------------------------------~~~~~~Iia------kIEt~- 239 (505)
.|.+.-+++++++++-++.+.+++.. +| .+.|+| +|+++
T Consensus 231 ~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~g-kpvi~ATQMLeSMi~~p~ 309 (606)
T 3t05_A 231 QKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLG-KPVITATQMLDSMQRNPR 309 (606)
T ss_dssp TTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHT-CCEEEESSSSGGGTTCSS
T ss_pred cCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcC-CCeEEehHHHHHhhcCCC
Confidence 67788899999999999998887631 12 233443 55553
Q ss_pred ----HHHhcHHHHHhcCCeeEEe----cCcccCcCCchhHHHHHHHHHHHHHHc
Q 010627 240 ----EGVANFDDILANSDAFMVA----RGDLGMEIPIEKIFLAQKVMIYKCNIQ 285 (505)
Q Consensus 240 ----~av~nldeI~~~sDgImIa----RgDLg~e~~~~~v~~~qk~Ii~~~~~~ 285 (505)
|.-+=...|+.-+|++|+. .|+ +|.+-| ..+.+|+..+.++
T Consensus 310 PTRAEvsDVanAv~dGaDavMLSgETA~G~----yPveaV-~~m~~I~~~aE~~ 358 (606)
T 3t05_A 310 ATRAEASDVANAIYDGTDAVMLSGETAAGL----YPEEAV-KTMRNIAVSAEAA 358 (606)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEECHHHHSCS----CSHHHH-HHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHcCCCEEEecccccCCC----CHHHHH-HHHHHHHHHHHhh
Confidence 4555567777779999995 443 454433 3455666666544
No 209
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=50.15 E-value=80 Score=32.71 Aligned_cols=87 Identities=11% Similarity=0.158 Sum_probs=49.9
Q ss_pred Cce-EEEEecCHHHHhcHHHHHhc-----CCeeEEe-c----Ccc---cCcC----CchhHHHHHHHHHHHHHHc--CCC
Q 010627 229 NIL-LMSKVENQEGVANFDDILAN-----SDAFMVA-R----GDL---GMEI----PIEKIFLAQKVMIYKCNIQ--GKP 288 (505)
Q Consensus 229 ~~~-IiakIEt~~av~nldeI~~~-----sDgImIa-R----gDL---g~e~----~~~~v~~~qk~Ii~~~~~~--gkp 288 (505)
+.+ |+.||=--..-+++.+|++. +|||.+. + -|+ ..+. |....+...+.+-+..++. ..|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 466 89999421112245555553 5999884 1 121 1111 1122344444444445555 589
Q ss_pred eEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 289 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 289 vi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
+|...-+- -..|+..++..|+|+|++.
T Consensus 348 IIg~GGI~------------s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIASGGIF------------SGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEECSSCC------------SHHHHHHHHHHTEEEEEES
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEc
Confidence 88755433 2467788888999999995
No 210
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=50.13 E-value=78 Score=30.76 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=57.3
Q ss_pred HHHhcccccCCCEEEEcCCC------ChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALSFVR------KGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV~------sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++.+.--. |.++=.++-+ ..+..+.+++||+-+= +.++++......+. +|++|+.+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33378889999998654321 2333333333 3334456789999873 56666655555444 699998754
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
... ....+.+...-+.|. .+.+.|+++-
T Consensus 106 ~y~-~~~~~~l~~~f~~ia---~a~~lPiilY 133 (291)
T 3tak_A 106 YYN-KPTQEGLYQHYKAIA---EAVELPLILY 133 (291)
T ss_dssp CSS-CCCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred CCC-CCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 433 123345544445554 4558999874
No 211
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=50.02 E-value=30 Score=33.15 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=37.5
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCC---------CHHHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 27 SRSVPMIEKLL-KAGMNVARFNFSHG---------SHEYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 27 ~~~~~~i~~li-~~G~~~~RlN~shg---------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
.-+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.|.. +++|+-+
T Consensus 38 ~~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi~--vild~h~ 101 (293)
T 1tvn_A 38 FYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY--VIIDFHS 101 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTCE--EEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCCCE--EEEEcCC
Confidence 34688999998 49999999988752 2344555666665666677744 6778754
No 212
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=49.86 E-value=84 Score=30.95 Aligned_cols=96 Identities=10% Similarity=0.010 Sum_probs=57.6
Q ss_pred HHHHhcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEec
Q 010627 191 EDILKWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaR 259 (505)
+.+.++.++.|+|++++. +.-|.++=.++ +...+.. .+++||+-+ -+.++++......+. +|++|+-+
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 333378889999999773 22333343344 3344444 578999987 455666655555544 69999965
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcC--CCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQG--KPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~g--kpvi~A 292 (505)
-.. -.+.+.+...-+.|. .+.+ .|+++-
T Consensus 111 P~~--~~s~~~l~~~f~~va---~a~~~~lPiilY 140 (313)
T 3dz1_A 111 PPS--LRTDEQITTYFRQAT---EAIGDDVPWVLQ 140 (313)
T ss_dssp CTT--CCSHHHHHHHHHHHH---HHHCTTSCEEEE
T ss_pred CCC--CCCHHHHHHHHHHHH---HhCCCCCcEEEE
Confidence 542 233445444444444 4446 898863
No 213
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=49.77 E-value=64 Score=34.30 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=55.5
Q ss_pred ChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhc-CCeeEEe-cCcccCcCCchhHHHHHHHHHHHHHH----
Q 010627 212 KGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILAN-SDAFMVA-RGDLGMEIPIEKIFLAQKVMIYKCNI---- 284 (505)
Q Consensus 212 sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~~~~---- 284 (505)
+.++++++++.. +.+|+.| +-++ +......+. +|+|.|+ .|--..+.+... ..+..++.+++..
T Consensus 331 ~~~~i~~lr~~~-----~~PvivKgv~~~---e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 331 TWKDIEELKKKT-----KLPIVIKGVQRT---EDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNLK 401 (511)
T ss_dssp CHHHHHHHHHHC-----SSCEEEEEECSH---HHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCCCH---HHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhccC
Confidence 456777777654 4678888 4332 222222222 6999993 221111222222 2334455555542
Q ss_pred cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 285 QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 285 ~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
...|||...-+- --.|+..++..|+|++|+..
T Consensus 402 ~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 402 DKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred CCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 267888765433 24788999999999999964
No 214
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=49.55 E-value=34 Score=29.15 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTR---------GGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~-~pVlvv 157 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSN-KPVLVV 157 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCC-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCC-CCEEEE
Confidence 5666677889999999999887 3778999988865 999998
No 215
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=49.42 E-value=38 Score=32.87 Aligned_cols=104 Identities=11% Similarity=0.055 Sum_probs=62.1
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe---cC--------HHHHhcHHHHHhcCCeeE
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV---EN--------QEGVANFDDILANSDAFM 256 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---Et--------~~av~nldeI~~~sDgIm 256 (505)
.|.+.+.+.+.+.|++.++++-+ +.++...+.++.++.+ ++...+=| +- .+.++.+++.++..+.-.
T Consensus 27 ~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (301)
T 2xio_A 27 DDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV 104 (301)
T ss_dssp CCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTE
T ss_pred cCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCe
Confidence 35555557788899998888743 6788888877765543 32222222 11 123455555554332234
Q ss_pred EecCcccCcCCc-h-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010627 257 VARGDLGMEIPI-E-KIFLAQ----KVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 257 IaRgDLg~e~~~-~-~v~~~q----k~Ii~~~~~~gkpvi~AT 293 (505)
+|=|..|.+... . .-...| +..++.|++.|+|+++-|
T Consensus 105 ~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 105 VAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred EEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 455777777632 1 112344 566789999999999865
No 216
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=49.20 E-value=61 Score=31.85 Aligned_cols=97 Identities=7% Similarity=0.061 Sum_probs=59.1
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++....-.+. +|++|+.+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33378889999999862 3344444444433 3444456789999984 36677666655544 699998654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 117 ~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK-PTQEGLYQHYKYI---SERTDLGIVVY 144 (306)
T ss_dssp CSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 4321 2334444444444 44568998863
No 217
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=49.02 E-value=26 Score=29.43 Aligned_cols=41 Identities=34% Similarity=0.465 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG--------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s--------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 145 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAV 145 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEE
Confidence 45666778889999999988763 677888888776 999988
No 218
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=48.81 E-value=96 Score=30.29 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=56.3
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHH-HHHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~-nav~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++.+..||+..|- ..+-.|..+.+ .|-..|+|++|+..
T Consensus 42 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 42 IDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG---------SNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp CCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 6999984 2222 2344455555555555555433578887542 34455665544 46778999999964
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
=--..--+-+.++..+.|+.++.-
T Consensus 112 P~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 112 PYYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 433333456788888998888754
No 219
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=48.47 E-value=8.8 Score=32.29 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=46.0
Q ss_pred HHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 215 DLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 215 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
=+..+++...+.|-++.+.|. +...+++.+.-.|.+++|| .+....+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a~-----~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANSG-----AYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEEE-----ETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEEc-----chHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCcEEE
Confidence 456677777777777777772 3334666777789999986 5556667788888889999975
No 220
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=48.31 E-value=68 Score=31.77 Aligned_cols=95 Identities=9% Similarity=0.032 Sum_probs=56.2
Q ss_pred hcccccCCCEEEEcC------CCChhHHHH-HHHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEecC-cc
Q 010627 195 KWGIPNQIDMIALSF------VRKGSDLVG-VRKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVARG-DL 262 (505)
Q Consensus 195 ~~al~~g~d~V~~sf------V~sa~dv~~-v~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaRg-DL 262 (505)
++.++.|+|++++.= .-|.++=.+ ++...+..+.+++||+-+ -+.++++......+. +|++|+-+- .+
T Consensus 39 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 39 AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 788899999987642 223333333 333344446678999987 345666655555544 699999654 33
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 263 GMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 263 g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.-....+.+...-+.|. .+.+.|+++-
T Consensus 119 ~kp~~~~~l~~~f~~ia---~a~~lPiilY 145 (318)
T 3qfe_A 119 GKATTPPVIKSFFDDVS---CQSPLPVVIY 145 (318)
T ss_dssp --CCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHH---hhCCCCEEEE
Confidence 21123345544445554 4558999863
No 221
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=47.88 E-value=1.4e+02 Score=29.11 Aligned_cols=115 Identities=13% Similarity=-0.054 Sum_probs=62.2
Q ss_pred cHHHHHhcccccCCCEEE-EcCCCChhHHHHHHHHHhcc-C--CCceEEEEe--cCHHHHhcHHHHHhc-CCeeEEecCc
Q 010627 189 DKEDILKWGIPNQIDMIA-LSFVRKGSDLVGVRKLLGGH-A--KNILLMSKV--ENQEGVANFDDILAN-SDAFMVARGD 261 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~-~sfV~sa~dv~~v~~~l~~~-~--~~~~IiakI--Et~~av~nldeI~~~-sDgImIaRgD 261 (505)
+.+.. ..+.+.|.-+++ .....+++++.+.-+.+++. + ..+.++..- ..+.--+.++.+++. .|+|.++-|+
T Consensus 28 ~~~la-~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~ 106 (328)
T 2gjl_A 28 RAEMA-AAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND 106 (328)
T ss_dssp SHHHH-HHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC
T ss_pred cHHHH-HHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC
Confidence 34444 555666754444 44556677765443333322 1 123344320 022222344555544 6999887442
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCC
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETA 331 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta 331 (505)
| ..+++.++++|.|++... .|.. +...+...|+|++.+++=++
T Consensus 107 -----p--------~~~~~~l~~~gi~vi~~v-----------~t~~---~a~~~~~~GaD~i~v~g~~~ 149 (328)
T 2gjl_A 107 -----P--------GEHIAEFRRHGVKVIHKC-----------TAVR---HALKAERLGVDAVSIDGFEC 149 (328)
T ss_dssp -----C--------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSEEEEECTTC
T ss_pred -----c--------HHHHHHHHHcCCCEEeeC-----------CCHH---HHHHHHHcCCCEEEEECCCC
Confidence 3 355677788899988421 2222 34457789999999965333
No 222
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=47.59 E-value=36 Score=35.88 Aligned_cols=55 Identities=15% Similarity=0.267 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCC----------HHHHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 27 SRSVPMIEKLLKAGMNVARFNFSHGS----------HEYHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 27 ~~~~~~i~~li~~G~~~~RlN~shg~----------~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
..+.+.|+.|-+.|+|++||-+++.. .+...+.++.+=+...+.| +.+++||-..
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G--i~vildlH~~ 109 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 109 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 34689999999999999999887532 1222334444444444556 5688898654
No 223
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=47.58 E-value=40 Score=33.65 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=40.9
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 16 KTKIVCTLGPASRSVP----MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~----~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
+...-+++| ..+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++. |.-+.+++|.
T Consensus 133 ~vp~~~~~g--~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHS--LDGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---GDDFGIMVDY 196 (359)
T ss_dssp CEEEEEECC--SCHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---CSSSEEEEEC
T ss_pred CeeeeeecC--CCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---CCCCEEEEEC
Confidence 345555655 23343 345677899999999999988888888888888763 3233455554
No 224
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=47.48 E-value=93 Score=27.60 Aligned_cols=60 Identities=18% Similarity=0.361 Sum_probs=40.1
Q ss_pred EecCCCEEEEEec----CCCCCCccEEEecchhhhc--ccCCCCEEEEe--CCe-EEEEEEEEeeeCCeEE
Q 010627 97 QLKQGQEITISTD----YTIKGDENMICMSYKKLAV--DVQPGSVILCS--DGT-ISFTVLECNVKAGLVK 158 (505)
Q Consensus 97 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~-i~l~V~~v~~~~~~i~ 158 (505)
-++.|++..|+.. +...+......++-..|.. .+++|+.+.+. +|. +..+|++ ++++.+.
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~--v~~~~v~ 114 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVA--VEGEEVT 114 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEE--EETTEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEE--ECCCEEE
Confidence 3678998888875 3333444455576666654 68999999997 465 3566774 4666655
No 225
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=47.24 E-value=1e+02 Score=30.74 Aligned_cols=149 Identities=13% Similarity=0.133 Sum_probs=85.9
Q ss_pred hhcHHHHHhcccccCCCE--EEEcCCCChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhcC----CeeEEec
Q 010627 187 EKDKEDILKWGIPNQIDM--IALSFVRKGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILANS----DAFMVAR 259 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~--V~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~s----DgImIaR 259 (505)
..|.+-+ +.|++.|++. ++-|.-.. ...++-..+.+.+ ..++++ ..+.+-++.+-+.+... +-|++.+
T Consensus 141 T~~~eV~-eaAleagag~~~lINsv~~~--~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDP 215 (323)
T 4djd_D 141 EKDHEVL-EAVAEAAAGENLLLGNAEQE--NYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDP 215 (323)
T ss_dssp HHHHHHH-HHHHHHTTTSCCEEEEEBTT--BCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred CCCHHHH-HHHHHhcCCCCCeEEECCcc--cHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeC
Confidence 5677788 8999988762 33332221 1233333343333 345554 22333444444444432 5688888
Q ss_pred CcccCcCCchhHHHHHHHHHHHH----HHcCCCeEEehhhhHhhhcC-------------CCCChH---HHHHHHHHHHc
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKC----NIQGKPVVTATQMLESMIKS-------------PRPTRA---EATDVANAVLD 319 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~----~~~gkpvi~ATqmLeSM~~~-------------~~ptra---Ev~Dv~nav~~ 319 (505)
|=....-+.+.-....+++-..+ +..|-|+++..- -+||+.. +...|. |+.--...+..
T Consensus 216 g~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~ 294 (323)
T 4djd_D 216 SIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQA 294 (323)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHh
Confidence 87655556666666666665543 468999997531 2333332 122233 33444557789
Q ss_pred CCceeeecccCCCCCCHHHHHHHHHHHHHH
Q 010627 320 GTDCVMLSGETAAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 320 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~ 349 (505)
|+|.++| ++| ++|+++++.+.+
T Consensus 295 ~~~i~v~-------~~p-~~~~~~~~~~~~ 316 (323)
T 4djd_D 295 GAHILLM-------RHP-EAVARVKENIDQ 316 (323)
T ss_dssp TCSEEEE-------CCH-HHHHHHHHHHHH
T ss_pred cCCEEEE-------cCH-HHHHHHHHHHHH
Confidence 9999999 578 788998887643
No 226
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=46.86 E-value=15 Score=39.53 Aligned_cols=51 Identities=18% Similarity=0.300 Sum_probs=41.8
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 16 KTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+-.+=|.+|-.-++.+-.+.|+++|+|++=+..+||..+...++++.+|+.
T Consensus 269 rL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 269 QLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp CBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 344556677655667889999999999999999999999988888888863
No 227
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=46.79 E-value=59 Score=32.89 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=66.5
Q ss_pred hhcHHHHHhccc---ccCCCEEEEcCC-----------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh--
Q 010627 187 EKDKEDILKWGI---PNQIDMIALSFV-----------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA-- 250 (505)
Q Consensus 187 e~D~~di~~~al---~~g~d~V~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-- 250 (505)
..|.....+... +.|+|+|-+.+- ++++.+.++-+.+.+. .+++|+.||=--....++.++++
T Consensus 138 ~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~ 216 (354)
T 4ef8_A 138 MRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEIL 216 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHH
Confidence 344444424433 457899877543 3455555555555443 35789999843212233444443
Q ss_pred ----cCCeeEEe----cC---cc---------cCcCC-c--hhH-HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCC
Q 010627 251 ----NSDAFMVA----RG---DL---------GMEIP-I--EKI-FLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRP 305 (505)
Q Consensus 251 ----~sDgImIa----Rg---DL---------g~e~~-~--~~v-~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~p 305 (505)
-+|+|.+- +| |+ ....+ + ..+ +...+.+-+..++. ..|+|...-+.
T Consensus 217 ~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~--------- 287 (354)
T 4ef8_A 217 NEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY--------- 287 (354)
T ss_dssp HTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC---------
T ss_pred HhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC---------
Confidence 15777641 11 10 00100 1 122 33333333333343 47888654432
Q ss_pred ChHHHHHHHHHHHcCCceeeec
Q 010627 306 TRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 306 traEv~Dv~nav~~G~D~imLs 327 (505)
...|+..++..|+|+||+.
T Consensus 288 ---s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 288 ---TGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp ---SHHHHHHHHHHTEEEEEEC
T ss_pred ---CHHHHHHHHHcCCCEEEEh
Confidence 2457788888999999995
No 228
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=46.74 E-value=30 Score=32.19 Aligned_cols=104 Identities=9% Similarity=0.092 Sum_probs=61.9
Q ss_pred hcHHHHHhcccccCCCEEEEcCCC-ChhHHHHHHHHHhccCCCceEEE---EecC------HHHHhcHHHHHhc-----C
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVR-KGSDLVGVRKLLGGHAKNILLMS---KVEN------QEGVANFDDILAN-----S 252 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~-sa~dv~~v~~~l~~~~~~~~Iia---kIEt------~~av~nldeI~~~-----s 252 (505)
.+..+..+.+.++|+|+|=+..-. +..++.++++.+.+.|-.+..+. -+-+ .++++.+...++. +
T Consensus 18 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~ 97 (275)
T 3qc0_A 18 CGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGA 97 (275)
T ss_dssp CCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344444488899999999875421 35678889999988775443222 1211 2345555555554 3
Q ss_pred CeeEEecCcccC-cCC----chhHHHHHHHHHHHHHHcCCCeEE
Q 010627 253 DAFMVARGDLGM-EIP----IEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 253 DgImIaRgDLg~-e~~----~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
+.+.+..|...- +.+ ++.+...-+++.+.|.++|..+.+
T Consensus 98 ~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 98 DCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp SCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 566666654421 112 234455556777778888887664
No 229
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=46.66 E-value=70 Score=31.28 Aligned_cols=69 Identities=19% Similarity=0.265 Sum_probs=50.5
Q ss_pred CCeEEEEecCCCCC---------C----HHHHHHHHHhCCcEEEEec-CC--C-----CHHHHHHHHHHHHHHHHHcCCe
Q 010627 15 PKTKIVCTLGPASR---------S----VPMIEKLLKAGMNVARFNF-SH--G-----SHEYHQETLNNLRTAMVNTGIL 73 (505)
Q Consensus 15 r~tkIi~TiGp~~~---------~----~~~i~~li~~G~~~~RlN~-sh--g-----~~~~~~~~i~~ir~~~~~~~~~ 73 (505)
.+++|++-|.+.-+ + .+..++|+++|+++.=+|. |- | ..||..+++.-++...++++.|
T Consensus 13 ~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~p 92 (282)
T 1aj0_A 13 SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVW 92 (282)
T ss_dssp TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCe
Confidence 57899998866432 1 2345779999999999998 43 2 1588888888888887777766
Q ss_pred eEEEEecCCCee
Q 010627 74 CAVMLDTKGPEI 85 (505)
Q Consensus 74 v~i~~Dl~Gpki 85 (505)
|.+|+.-|++
T Consensus 93 --iSIDT~~~~v 102 (282)
T 1aj0_A 93 --ISVDTSKPEV 102 (282)
T ss_dssp --EEEECCCHHH
T ss_pred --EEEeCCCHHH
Confidence 6678876554
No 230
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=46.53 E-value=1.7e+02 Score=28.55 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=75.4
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC-------------CCChhHHHHHHHHHhccCCCceEEEEecC-------HHHHh
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF-------------VRKGSDLVGVRKLLGGHAKNILLMSKVEN-------QEGVA 243 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf-------------V~sa~dv~~v~~~l~~~~~~~~IiakIEt-------~~av~ 243 (505)
-+|-+|.--- +.+-+.|+|.+.+.. --|.+++..--+.+........|++=.+- .++++
T Consensus 21 ~~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 21 MLTAYESSFA-ALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEECCSHHHH-HHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 3466777777 778889999997752 11244444333333333345677787763 46788
Q ss_pred cHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeE----Eehhhh---HhhhcCCCCCh-HH-HHHH
Q 010627 244 NFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVV----TATQML---ESMIKSPRPTR-AE-ATDV 313 (505)
Q Consensus 244 nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi----~ATqmL---eSM~~~~~ptr-aE-v~Dv 313 (505)
|...+++. +++|-+--|+ .+...|+++.++|.||+ +--|-. .......+..+ .| +.|.
T Consensus 100 na~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA 167 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDA 167 (275)
T ss_dssp HHHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHH
Confidence 88898885 5899886442 23455667778999986 211211 11111111111 22 2455
Q ss_pred HHHHHcCCceeeec
Q 010627 314 ANAVLDGTDCVMLS 327 (505)
Q Consensus 314 ~nav~~G~D~imLs 327 (505)
......|+|+++|-
T Consensus 168 ~a~~eAGA~~ivlE 181 (275)
T 1o66_A 168 KAHDDAGAAVVLME 181 (275)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHHHHcCCcEEEEe
Confidence 55777899999983
No 231
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=46.40 E-value=87 Score=30.36 Aligned_cols=99 Identities=9% Similarity=-0.014 Sum_probs=53.8
Q ss_pred ChhcHHHHHhcccccCCCEEEEcCCC-------------------------C----hhHHHHHHHHHhccCCCceEEEE-
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSFVR-------------------------K----GSDLVGVRKLLGGHAKNILLMSK- 235 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sfV~-------------------------s----a~dv~~v~~~l~~~~~~~~Iiak- 235 (505)
+..+...+.+.+.+.|+|+|.++--- . +..+..++++-+..+.+++||+-
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~G 249 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTG 249 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEES
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEEC
Confidence 44555554477888999999886421 0 11234444433333336777774
Q ss_pred -ecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 010627 236 -VENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 236 -IEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkp 288 (505)
|.|++-+. +-|..-+|++++||+=|. -+..-+..+.+.+-....+.|..
T Consensus 250 GI~~~~da~--~~l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~~ 299 (311)
T 1jub_A 250 GIETGQDAF--EHLLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGYQ 299 (311)
T ss_dssp SCCSHHHHH--HHHHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHH--HHHHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCCC
Confidence 66654332 223334899999998663 01223334445555555555543
No 232
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=46.37 E-value=52 Score=32.57 Aligned_cols=96 Identities=16% Similarity=0.058 Sum_probs=57.7
Q ss_pred HHhcccccCCCEEEEcC------CCChhHHHHH-HHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecCc
Q 010627 193 ILKWGIPNQIDMIALSF------VRKGSDLVGV-RKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARGD 261 (505)
Q Consensus 193 i~~~al~~g~d~V~~sf------V~sa~dv~~v-~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRgD 261 (505)
+.++.++.|+|++++.= .-|.++=.++ +...+..+.+++||+-+= +.++++......+. +|++|+.+-.
T Consensus 50 lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 50 SIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 33788899999987531 2233333333 333444456788999884 56666666665554 6999996544
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
..- ...+.+...-+.| |.+.+.|+++-
T Consensus 130 y~~-~s~~~l~~~f~~v---a~a~~lPiilY 156 (315)
T 3na8_A 130 YWK-LNEAEVFQHYRAV---GEAIGVPVMLY 156 (315)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCcEEEE
Confidence 321 2334544444444 44557999863
No 233
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=46.06 E-value=1e+02 Score=26.91 Aligned_cols=60 Identities=12% Similarity=0.216 Sum_probs=40.9
Q ss_pred EecCCCEEEEEec----CCCCCCccEEEecchhhh-cccCCCCEEEEe--CCe-EEEEEEEEeeeCCeEE
Q 010627 97 QLKQGQEITISTD----YTIKGDENMICMSYKKLA-VDVQPGSVILCS--DGT-ISFTVLECNVKAGLVK 158 (505)
Q Consensus 97 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~-~~v~~Gd~I~id--DG~-i~l~V~~v~~~~~~i~ 158 (505)
-++.|++..|+.. +...+......++-..|. ..+++|+.+.+. ||. +..+|++ ++++.+.
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~--v~~~~v~ 123 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKD--FSATHVM 123 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEE--ECSSEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEE--ECCCEEE
Confidence 3678999998875 333444445567766662 368999999986 575 5667874 4777665
No 234
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=45.90 E-value=36 Score=34.26 Aligned_cols=57 Identities=16% Similarity=0.245 Sum_probs=39.0
Q ss_pred CCCCCCHHHHHHHHHhCCcEEEEecCCCC-------H-HHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 24 GPASRSVPMIEKLLKAGMNVARFNFSHGS-------H-EYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 24 Gp~~~~~~~i~~li~~G~~~~RlN~shg~-------~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
|..-.+++.++.|-+.|+|++||-++... . +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--i~vIldlH~ 113 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHH 113 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 44445789999999999999999987532 1 333444444444455667 558889874
No 235
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=45.76 E-value=1e+02 Score=31.08 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=65.4
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEcC-------------CCChhH----------------HHHHHHHHhccC
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALSF-------------VRKGSD----------------LVGVRKLLGGHA 227 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~sf-------------V~sa~d----------------v~~v~~~l~~~~ 227 (505)
.||..|.+.+. +.+.+.|+|+|=+.. .+...| ++++|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 35665554432 456789999998843 232222 55555555 3
Q ss_pred CCceEEEEecCH---------HHHhcHHHHHh----c-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeh
Q 010627 228 KNILLMSKVENQ---------EGVANFDDILA----N-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 228 ~~~~IiakIEt~---------~av~nldeI~~----~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~AT 293 (505)
.+ .|..||--- ..++...++++ . .|+|-+..+...-. +...+ ..+-...+..+.|+|...
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~----~~~~~i~~~~~iPvi~~G 300 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA-PDTPV----SFKRALREAYQGVLIYAG 300 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCH----HHHHHHHHHCCSEEEEES
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC-CCccH----HHHHHHHHHCCCcEEEeC
Confidence 34 677777321 12233333333 2 58888876543111 10011 112222334578988754
Q ss_pred hhhHhhhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 294 QMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 294 qmLeSM~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
. . |. .+...++..| +|+|++.
T Consensus 301 g---------i-~~---~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 301 R---------Y-NA---EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp S---------C-CH---HHHHHHHHTTSCSEEECC
T ss_pred C---------C-CH---HHHHHHHHCCCcceehhc
Confidence 4 2 33 3446677788 9999995
No 236
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=45.72 E-value=75 Score=33.52 Aligned_cols=123 Identities=16% Similarity=0.236 Sum_probs=70.3
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.++.+- .|..+....+...-..|++-+....+... ..+..+++...+++++....++
T Consensus 126 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~ 193 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIV 193 (527)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEEC
T ss_pred HHHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEe
Confidence 34566888999998653 13333334455666789998777544221 1233455555555544322221
Q ss_pred chhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPLESLASSAVRTANSAR--ATLILVLTRGGSTAKLVAKY----RPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~~----RP~~pIiav 418 (505)
..+ |. . |.++..-....+.++..+++ .++||+.+-+|.|+--++++ .|.+.|+++
T Consensus 194 ~~~-~~-----n--~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigv 254 (527)
T 3pc3_A 194 LDQ-YR-----N--AGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGV 254 (527)
T ss_dssp CCT-TT-----C--THHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCC-CC-----C--cchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 110 10 0 11111112234556666664 79999999999987665554 799999999
No 237
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=45.68 E-value=1.2e+02 Score=30.45 Aligned_cols=122 Identities=12% Similarity=0.052 Sum_probs=64.6
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEE-------------cCCCChhH----------------HHHHHHHHhccC
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIAL-------------SFVRKGSD----------------LVGVRKLLGGHA 227 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~-------------sfV~sa~d----------------v~~v~~~l~~~~ 227 (505)
.||..|...+. +.+.+.|+|+|=+ |..+...| ++++|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEW---S 226 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHS---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhc---C
Confidence 35655554432 4567899999988 44444333 44445444 4
Q ss_pred CCceEEEEecCH---H-------HHhcHHHHHhc-----CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 228 KNILLMSKVENQ---E-------GVANFDDILAN-----SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 228 ~~~~IiakIEt~---~-------av~nldeI~~~-----sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.+ .|..||--- . .++..-++++. .|.|-+..+..... +...+. .+-...+..+.|++..
T Consensus 227 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~~----~~~~v~~~~~iPvi~~ 300 (364)
T 1vyr_A 227 AD-RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYSEA----FRQKVRERFHGVIIGA 300 (364)
T ss_dssp GG-GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCHH----HHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-CcccHH----HHHHHHHHCCCCEEEE
Confidence 44 677777321 1 22232233332 58888865432111 111111 1222334468898875
Q ss_pred hhhhHhhhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 293 TQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 293 TqmLeSM~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
.. . |+ .+...++..| +|+|++.
T Consensus 301 Gg---------i-t~---~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 301 GA---------Y-TA---EKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp SS---------C-CH---HHHHHHHHTTSCSEEEES
T ss_pred CC---------c-CH---HHHHHHHHCCCccEEEEC
Confidence 43 2 33 3446677788 9999995
No 238
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=45.45 E-value=2.2e+02 Score=28.08 Aligned_cols=114 Identities=16% Similarity=0.221 Sum_probs=68.0
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.|+.+- | |..+....+...-..|++-+...+ ..-++.+...+++++-...+.
T Consensus 89 ~a~A~aa~~~G~~~~iv------~-----p~~~~~~k~~~~~~~GA~V~~v~~------~~~~~~~~a~~l~~~~~~~~i 151 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIV------V-----PQTAPDCKKLAIQAYGASIVYCEP------SDESRENVAKRVTEETEGIMV 151 (346)
T ss_dssp HHHHHHHHHTTCCEEEE------E-----ETTSCHHHHHHHHHTTCEEEEECS------SHHHHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHhCCCEEEE------E-----CCCCCHHHHHHHHHCCCEEEEECC------CHHHHHHHHHHHHHhcCCEEE
Confidence 34567799999998763 1 222222345556678999776643 235677777776654332111
Q ss_pred chhhHHhhhhCCCCCCCch--hhHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPL--ESLASSAVRTANSA-RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~--~~ia~~av~~a~~~-~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
.. | .++. ..-...+.++..++ +.+.||+.+-+|.|.--+++ .+|.+.|+++
T Consensus 152 ~~--~----------~np~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigV 209 (346)
T 3l6b_A 152 HP--N----------QEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAA 209 (346)
T ss_dssp CS--S----------SCHHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CC--C----------CChHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 00 0 0111 11222344555555 56899999999998765544 4799999999
No 239
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=45.30 E-value=54 Score=32.36 Aligned_cols=95 Identities=8% Similarity=0.074 Sum_probs=58.6
Q ss_pred HhcccccCCCEEEEcCC------CChhHHHHH-HHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-C-CeeEEecCc
Q 010627 194 LKWGIPNQIDMIALSFV------RKGSDLVGV-RKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-S-DAFMVARGD 261 (505)
Q Consensus 194 ~~~al~~g~d~V~~sfV------~sa~dv~~v-~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-s-DgImIaRgD 261 (505)
.++.++.|+|++++.=- -|.++=.++ +...+..+.+++||+-+ -+.++++......+. . |++|+.+-.
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCC
Confidence 37888999999876431 233333333 33444446678999987 356777777776664 4 999997544
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
..- ...+.+.. ..-..|.+.+.|+++-
T Consensus 114 y~~-~s~~~l~~---~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 114 YNK-PSQEGMYQ---HFKAIADASDLPIIIY 140 (311)
T ss_dssp SSC-CCHHHHHH---HHHHHHHSCSSCEEEE
T ss_pred CCC-CCHHHHHH---HHHHHHHhCCCCEEEE
Confidence 322 23344444 4444445568999874
No 240
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=44.72 E-value=24 Score=37.01 Aligned_cols=48 Identities=27% Similarity=0.474 Sum_probs=39.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 19 IVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 19 Ii~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+.+-+|+.....+.++.++++|++++=++++||......+.++.+|+.
T Consensus 228 vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred cccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 334567655567899999999999999999999887777788888764
No 241
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=44.65 E-value=42 Score=27.72 Aligned_cols=42 Identities=26% Similarity=0.290 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcC--------CchHHHHHHhhCCCCcEEEE
Q 010627 376 SLASSAVRTANSARATLILVLTR--------GGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 376 ~ia~~av~~a~~~~a~~Ivv~T~--------sG~ta~~ls~~RP~~pIiav 418 (505)
..+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~-~pVlvv 142 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAE-CSVLVV 142 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCS-SEEEEE
T ss_pred ChHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCC-CCEEEe
Confidence 35666777889999999999886 3678888888765 999987
No 242
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=44.62 E-value=1.7e+02 Score=28.55 Aligned_cols=95 Identities=15% Similarity=0.060 Sum_probs=57.1
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++ -..||+..|- ..+-.|..+.+. |-..|+
T Consensus 39 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHVG---------CVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhCCC
Confidence 333443 6999985 3222 23445555555555555543 2468876542 334456655554 566799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 108 DAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999997433223345677889999988877
No 243
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=44.48 E-value=31 Score=32.97 Aligned_cols=53 Identities=6% Similarity=0.075 Sum_probs=36.3
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCC-------CHHHHHHHHHHHHHHHHHcCCeeEEEEecC
Q 010627 27 SRSVPMIEKLL-KAGMNVARFNFSHG-------SHEYHQETLNNLRTAMVNTGILCAVMLDTK 81 (505)
Q Consensus 27 ~~~~~~i~~li-~~G~~~~RlN~shg-------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 81 (505)
.-+.+.++.|. +.|+|++|+-+... +++...+.++.+=+.+.+.|.. +++|+-
T Consensus 38 ~~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~--vild~h 98 (291)
T 1egz_A 38 FYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDMY--AIIGWH 98 (291)
T ss_dssp GCSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTCE--EEEEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCCCE--EEEEcC
Confidence 34678999998 79999999987642 2334455555555556677744 677874
No 244
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=44.45 E-value=1.6e+02 Score=31.66 Aligned_cols=150 Identities=16% Similarity=0.205 Sum_probs=86.7
Q ss_pred cEEEecchhhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCcccCCc----------------c-
Q 010627 117 NMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGV----------------I- 179 (505)
Q Consensus 117 ~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgvnlp~~----------------~- 179 (505)
+.|++|.-.+--.| +-++++.+..+|+ .++.+. -+-|.=-++..+++|.. +
T Consensus 191 d~IlidDG~i~l~V-----~~v~~~~v~~~V~----~gG~L~---s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ 258 (550)
T 3gr4_A 191 SKIYVDDGLISLQV-----KQKGADFLVTEVE----NGGSLG---SKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDM 258 (550)
T ss_dssp CEEEETTTTEEEEE-----EEECSSEEEEEEE----ECEEEC---SSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSE
T ss_pred CEEEEeCCEEEEEE-----EEEeCCEEEEEEE----eCcEEc---CCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCE
Confidence 45677643332111 2345667777776 222331 24466667778888842 1
Q ss_pred ccCCCC-ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHh---------------------------------c
Q 010627 180 VDLPTL-TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLG---------------------------------G 225 (505)
Q Consensus 180 ~~l~~l-te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~---------------------------------~ 225 (505)
+-+|.+ +..|...+.++.-+.|.+.-+++++++++-++.+.+++. .
T Consensus 259 ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~ 338 (550)
T 3gr4_A 259 VFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNR 338 (550)
T ss_dssp EEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHH
Confidence 112221 567777774444456777788999999999999888773 1
Q ss_pred cCCCceEEE------EecCH-----HHHhcHHHHHhcCCeeEE----ecCcccCcCCchhHHHHHHHHHHHHHH
Q 010627 226 HAKNILLMS------KVENQ-----EGVANFDDILANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIYKCNI 284 (505)
Q Consensus 226 ~~~~~~Iia------kIEt~-----~av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~~~~ 284 (505)
+| .+.|+| +|+++ |+-+=...|+.-+|++|+ +.|+. |.+- -..+.+|+..+.+
T Consensus 339 ag-kpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~y----Pvea-V~~M~~I~~~aE~ 406 (550)
T 3gr4_A 339 AG-KPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDY----PLEA-VRMQHLIAREAEA 406 (550)
T ss_dssp HT-CCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHHH-HHHHHHHHHHHHH
T ss_pred hC-CCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCC----HHHH-HHHHHHHHHHHhh
Confidence 12 233444 56553 334446777777899999 55543 3333 3344556655554
No 245
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=44.40 E-value=1e+02 Score=27.69 Aligned_cols=61 Identities=18% Similarity=0.377 Sum_probs=41.8
Q ss_pred EecCCCEEEEEec----CCCCCCccEEEecchhhhc--ccCCCCEEEEe--CCe-EEEEEEEEeeeCCeEEE
Q 010627 97 QLKQGQEITISTD----YTIKGDENMICMSYKKLAV--DVQPGSVILCS--DGT-ISFTVLECNVKAGLVKC 159 (505)
Q Consensus 97 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~id--DG~-i~l~V~~v~~~~~~i~~ 159 (505)
-++.|++.+|+.. |..........++-..|.. .+++|+.+.+. ||. +..+|++ ++++.+..
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~--v~~~~V~v 143 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIRE--INGDSITV 143 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEE--EETTEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEE--EcCCEEEE
Confidence 4689999999875 3333444455677666654 48999999986 454 6778884 47776653
No 246
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=44.30 E-value=63 Score=31.84 Aligned_cols=155 Identities=17% Similarity=0.140 Sum_probs=83.3
Q ss_pred HHhcHHHHHh----cCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHH
Q 010627 241 GVANFDDILA----NSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANA 316 (505)
Q Consensus 241 av~nldeI~~----~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~na 316 (505)
+++++++.+. .+|+|++-+|=+.. .... ..++|.|+-..-=+|+.. +.+...-...+..|
T Consensus 71 gl~~~~~~i~~l~~g~dav~~~~G~~~~-------------~~~~--~~~~~lil~l~~~t~~~~-~~~~~~l~~~ve~A 134 (295)
T 3glc_A 71 GLERIDINIAPLFEHADVLMCTRGILRS-------------VVPP--ATNRPVVLRASGANSILA-ELSNEAVALSMDDA 134 (295)
T ss_dssp TCTTHHHHTGGGGGGCSEEEECHHHHHH-------------HSCG--GGCCCEEEECEECCCTTS-CTTCCEECSCHHHH
T ss_pred chhhhHHHHHHhhcCCCEEEECHhHHhh-------------hccc--cCCccEEEEEcCCCcCCC-CCccchhHHHHHHH
Confidence 5555554443 37999987654321 1111 137788875433233322 12222223567889
Q ss_pred HHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEE
Q 010627 317 VLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVL 396 (505)
Q Consensus 317 v~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~ 396 (505)
+..|+|++-+..=.- ..+..+.++.+.+++.+++.+- -.-+... ........+ ..+...++++|.+++|+.|-+
T Consensus 135 v~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~G-lpvIie~-~~G~~~~~d--~e~i~~aariA~elGAD~VKt- 208 (295)
T 3glc_A 135 VRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVG-MPTMAVT-GVGKDMVRD--QRYFSLATRIAAEMGAQIIKT- 208 (295)
T ss_dssp HHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTT-CCEEEEE-CC----CCS--HHHHHHHHHHHHHTTCSEEEE-
T ss_pred HHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcC-CEEEEEC-CCCCccCCC--HHHHHHHHHHHHHhCCCEEEe-
Confidence 999999998853322 3456678888889988887641 0000000 000000111 233345778899999995544
Q ss_pred cCCchHHHHHHhhCCCCcEEEE
Q 010627 397 TRGGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 397 T~sG~ta~~ls~~RP~~pIiav 418 (505)
+.+|.+-+.+...- ++||++.
T Consensus 209 ~~t~e~~~~vv~~~-~vPVv~~ 229 (295)
T 3glc_A 209 YYVEKGFERIVAGC-PVPIVIA 229 (295)
T ss_dssp ECCTTTHHHHHHTC-SSCEEEE
T ss_pred CCCHHHHHHHHHhC-CCcEEEE
Confidence 44554444444332 4788887
No 247
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=44.30 E-value=73 Score=32.06 Aligned_cols=131 Identities=10% Similarity=-0.010 Sum_probs=67.9
Q ss_pred ChhcHHHHHhcccccCCC-EEEEcCC-----------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc--
Q 010627 186 TEKDKEDILKWGIPNQID-MIALSFV-----------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-- 251 (505)
Q Consensus 186 te~D~~di~~~al~~g~d-~V~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 251 (505)
+..|.....+...+.|+| +|-+.+- ++++.+.++-+.+.+. .+++|+.||=--.....+.++++.
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~ag 217 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFN 217 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhC
Confidence 344444443444446776 8776653 3555555555555443 357899999532222333334432
Q ss_pred CCeeE-------------EecCccc----CcC----CchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChH
Q 010627 252 SDAFM-------------VARGDLG----MEI----PIEKIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRA 308 (505)
Q Consensus 252 sDgIm-------------IaRgDLg----~e~----~~~~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptra 308 (505)
+|+|- |.+.-.. .+. |....+...+.+-+..++. ..|+|...-+-
T Consensus 218 a~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~------------ 285 (345)
T 3oix_A 218 XYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX------------ 285 (345)
T ss_dssp TSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC------------
T ss_pred CCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC------------
Confidence 35441 2211110 011 1122333444444444444 47888655432
Q ss_pred HHHHHHHHHHcCCceeeeccc
Q 010627 309 EATDVANAVLDGTDCVMLSGE 329 (505)
Q Consensus 309 Ev~Dv~nav~~G~D~imLs~E 329 (505)
...|+..++..|+|+||+..-
T Consensus 286 s~~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 286 TGRDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp SHHHHHHHHHHTCSEEEESHH
T ss_pred ChHHHHHHHHhCCCEEEEChH
Confidence 245777888899999999643
No 248
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=44.14 E-value=64 Score=31.87 Aligned_cols=99 Identities=9% Similarity=0.080 Sum_probs=57.5
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEec--CHHHHhcHHHHHhc-CCeeEEec
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKVE--NQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakIE--t~~av~nldeI~~~-sDgImIaR 259 (505)
.+.+.++.++.|+|++++. +.-|.++=.++ +...+..+.+++||+-+= +.++++......+. +|++|+.+
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 35 LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3333478889999998753 23344444443 333444456789999885 44555554444433 69999965
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 115 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 143 (314)
T 3d0c_A 115 PVHPY-ITDAGAVEYYRNI---IEALDAPSIIY 143 (314)
T ss_dssp CCCSC-CCHHHHHHHHHHH---HHHSSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 43321 2334444444444 55667998873
No 249
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=44.09 E-value=39 Score=28.03 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=34.0
Q ss_pred hHHHHHHH-HHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010627 376 SLASSAVR-TANSARATLILVLTR---------GGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 376 ~ia~~av~-~a~~~~a~~Ivv~T~---------sG~ta~~ls~~RP~~pIiav 418 (505)
..+...++ .|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 35667777 788899999999875 3688888888876 999987
No 250
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=44.05 E-value=30 Score=34.03 Aligned_cols=64 Identities=14% Similarity=0.140 Sum_probs=47.1
Q ss_pred HHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHH--HhcHHHHHhc-CCeeEEec
Q 010627 190 KEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEG--VANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-sDgImIaR 259 (505)
.+.+ +-+++.|+|+|.+-. -++++++++.+.+...+.+++ ||=--| .+|+.++++. .|+|-+|.
T Consensus 204 ~eea-~eal~aGaD~I~LDn-~~~~~~~~~v~~l~~~~~~v~----ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQL-DAVLPEKPELILLDN-FAVWQTQTAVQRRDSRAPTVM----LESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHH-HHHGGGCCSEEEEET-CCHHHHHHHHHHHHHHCTTCE----EEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeE----EEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 3455 667888999999988 478999999888876444544 333333 3788898887 79999875
No 251
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=43.87 E-value=47 Score=32.41 Aligned_cols=99 Identities=8% Similarity=0.049 Sum_probs=57.8
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEecC---HHHHhcHHHHHhc-CCeeEEe
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVEN---QEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIEt---~~av~nldeI~~~-sDgImIa 258 (505)
.+.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+=+ .++++....-.+. +|++|+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (292)
T 2ojp_A 24 LKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTV 103 (292)
T ss_dssp HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEEC
Confidence 3333478889999999863 2334444444433 34444567889998843 5666555544433 6999986
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 104 ~P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 133 (292)
T 2ojp_A 104 TPYYNR-PSQEGLYQHFKAI---AEHTDLPQILY 133 (292)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 544321 2334444444444 44557898863
No 252
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=43.86 E-value=33 Score=34.29 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=67.6
Q ss_pred hhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCC--CceEEEEe-------cC--HH-HHhcHHHHHhcCCe
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAK--NILLMSKV-------EN--QE-GVANFDDILANSDA 254 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~--~~~IiakI-------Et--~~-av~nldeI~~~sDg 254 (505)
+.|.+.+.+.|.+.|++.++++-+ +.++...+.++.++... .+.+++-+ .. .+ .++.+.+.++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 567777768999999998888765 68888888777654321 11344443 11 11 45566666655433
Q ss_pred eEEecCcccCcCCc-h-hHHHHH----HHHHHHHHH-cCCCeEEeh
Q 010627 255 FMVARGDLGMEIPI-E-KIFLAQ----KVMIYKCNI-QGKPVVTAT 293 (505)
Q Consensus 255 ImIaRgDLg~e~~~-~-~v~~~q----k~Ii~~~~~-~gkpvi~AT 293 (505)
=++|=|+.|.+... . .-...| ++-++.|++ .++|+++-+
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~ 175 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHC 175 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 45566788877643 1 112344 466788999 999999854
No 253
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=43.80 E-value=2.4e+02 Score=27.49 Aligned_cols=94 Identities=11% Similarity=0.027 Sum_probs=62.6
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCC-------------CChhHHH-HHHHHHhccCCCceEEEEecC------HHHH
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFV-------------RKGSDLV-GVRKLLGGHAKNILLMSKVEN------QEGV 242 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV-------------~sa~dv~-~v~~~l~~~~~~~~IiakIEt------~~av 242 (505)
.-+|-+|.--- +.+-+.|+|.|++..- -+.+++. .++... ..-++..|++=+++ .+++
T Consensus 32 ~m~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~-r~~~~~~vvaD~pfgsY~s~~~a~ 109 (275)
T 3vav_A 32 AMLTCYDASFA-ALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVA-RAQPRALIVADLPFGTYGTPADAF 109 (275)
T ss_dssp EEEECCSHHHH-HHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHH-HTCCSSEEEEECCTTSCSSHHHHH
T ss_pred EEEeCcCHHHH-HHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHH-hcCCCCCEEEecCCCCCCCHHHHH
Confidence 34577888887 8888899999987621 1223333 333333 33346889999998 4678
Q ss_pred hcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeE
Q 010627 243 ANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVV 290 (505)
Q Consensus 243 ~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi 290 (505)
+|...+++. +++|-+--|. .+...+++..++|.|++
T Consensus 110 ~~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~ 146 (275)
T 3vav_A 110 ASAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVC 146 (275)
T ss_dssp HHHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEE
Confidence 888888875 6888885442 12345556678999996
No 254
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=43.77 E-value=78 Score=29.16 Aligned_cols=112 Identities=18% Similarity=0.162 Sum_probs=64.7
Q ss_pred HHHHHhcccccCCCEEEEc-----CCCC----hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEec
Q 010627 190 KEDILKWGIPNQIDMIALS-----FVRK----GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s-----fV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaR 259 (505)
.+++ +.+.+.|+|++-+- |+.+ .+.++++++.+ +....+..++..++ +.++...++ +|++.+.-
T Consensus 26 ~~~i-~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 26 GEQV-KAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp HHHH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEEC
T ss_pred HHHH-HHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEe
Confidence 3455 77788899998773 5554 34555554432 33455667887754 445666554 69998862
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
..... +.. ...++.++++|+.++++.. |. |..|. ..++..++|.+++.
T Consensus 100 ~~~~~----~~~----~~~~~~~~~~g~~ig~~~~--------p~-t~~e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 100 EQSST----IHL----HRTINQIKSLGAKAGVVLN--------PG-TPLTA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp STTTC----SCH----HHHHHHHHHTTSEEEEEEC--------TT-CCGGG---GTTTTTTCSEEEEE
T ss_pred cCccc----hhH----HHHHHHHHHcCCcEEEEeC--------CC-CCHHH---HHHHHhhCCEEEEE
Confidence 20011 121 3567778888988887631 11 11121 23445789988553
No 255
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=43.72 E-value=46 Score=28.56 Aligned_cols=41 Identities=27% Similarity=0.343 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTR---------GGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv 154 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLII 154 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEE
Confidence 5666778889999999999887 2567888888865 999999
No 256
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=43.64 E-value=1.1e+02 Score=28.07 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=66.8
Q ss_pred CCCChh--cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEE-----------ecCHHHHhcHHHHH
Q 010627 183 PTLTEK--DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSK-----------VENQEGVANFDDIL 249 (505)
Q Consensus 183 ~~lte~--D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-----------IEt~~av~nldeI~ 249 (505)
|..+.. +...+.+.+.+.|++++.+ .+++.++.+++.. +++++.- |+. -.+.+++.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~ 98 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLA 98 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHH
Confidence 333444 5555547777899999876 4788888887654 2344421 222 233455555
Q ss_pred hc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCcee--
Q 010627 250 AN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV-- 324 (505)
Q Consensus 250 ~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~i-- 324 (505)
+. +|.|.+.-.-+.-.-+ +.+ .++++.+++. ++++++-. -|..| ...+...|+|.+
T Consensus 99 ~~Gad~V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~~e---a~~a~~~Gad~i~~ 159 (234)
T 1yxy_A 99 ALNIAVIAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADI-----------STFDE---GLVAHQAGIDFVGT 159 (234)
T ss_dssp TTTCSEEEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEEC-----------SSHHH---HHHHHHTTCSEEEC
T ss_pred HcCCCEEEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeC-----------CCHHH---HHHHHHcCCCEEee
Confidence 54 6988776432210000 111 4567777776 77776522 12333 566788999999
Q ss_pred eecc
Q 010627 325 MLSG 328 (505)
Q Consensus 325 mLs~ 328 (505)
.+.+
T Consensus 160 ~v~g 163 (234)
T 1yxy_A 160 TLSG 163 (234)
T ss_dssp TTTT
T ss_pred eccc
Confidence 4443
No 257
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=43.34 E-value=2.5e+02 Score=30.07 Aligned_cols=187 Identities=16% Similarity=0.039 Sum_probs=111.2
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcC----CC-----ChhHHHHHHHHHhccCCCceEEEEec--CHHHH---------h
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSF----VR-----KGSDLVGVRKLLGGHAKNILLMSKVE--NQEGV---------A 243 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sf----V~-----sa~dv~~v~~~l~~~~~~~~IiakIE--t~~av---------~ 243 (505)
.++..|+..|.+...+.|++.|=+.+ +. ++++.+.++.+.+. ..++.+.+.+= +..|. .
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccHH
Confidence 56777777775666778999987753 11 55666666554432 34566666552 11122 1
Q ss_pred cHHHHHhc-CCeeEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHc
Q 010627 244 NFDDILAN-SDAFMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLD 319 (505)
Q Consensus 244 nldeI~~~-sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~ 319 (505)
+++..++. .|.|-| +-.|+ .-.+..++.++++|+.+-.+= |+...+.-+...+.+++. +...
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDP----------RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEEEehhHH----------HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHc
Confidence 23444443 465544 22233 234788999999999872110 223444556677777777 5667
Q ss_pred CCceeeecccCCCCCCHHHHHHHHHHHHHHH--hcccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEc
Q 010627 320 GTDCVMLSGETAAGAYPEVAVRTMAQICVEA--ESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLT 397 (505)
Q Consensus 320 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~a--E~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T 397 (505)
|+|.|.| .+|+=+-.|-++-+.+..+.++. .-.+.. |++ + .--+|.+...+|-+.+|+ +|=-|
T Consensus 188 Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~--H~H----------n-d~GlAvAN~laAveAGa~-~VD~t 252 (539)
T 1rqb_A 188 GADSIAL-KDMAALLKPQPAYDIIKAIKDTYGQKTQINL--HCH----------S-TTGVTEVSLMKAIEAGVD-VVDTA 252 (539)
T ss_dssp TCSEEEE-EETTCCCCHHHHHHHHHHHHHHHCTTCCEEE--EEB----------C-TTSCHHHHHHHHHHTTCS-EEEEB
T ss_pred CCCEEEe-CCCCCCcCHHHHHHHHHHHHHhcCCCceEEE--EeC----------C-CCChHHHHHHHHHHhCCC-EEEEe
Confidence 9999999 68888888999988888887665 211211 111 1 112455566677788998 44444
Q ss_pred CCc
Q 010627 398 RGG 400 (505)
Q Consensus 398 ~sG 400 (505)
-.|
T Consensus 253 i~g 255 (539)
T 1rqb_A 253 ISS 255 (539)
T ss_dssp CGG
T ss_pred ccc
Confidence 333
No 258
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=43.13 E-value=41 Score=29.19 Aligned_cols=41 Identities=24% Similarity=0.259 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTR---------GGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 107 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV 156 (163)
T 1tq8_A 107 PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEE
Confidence 3556677888999999999887 2567778888765 999998
No 259
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=43.08 E-value=47 Score=33.25 Aligned_cols=57 Identities=18% Similarity=0.286 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHHhCCcEEEEecCCCCH---------HHHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 25 PASRSVPMIEKLLKAGMNVARFNFSHGSH---------EYHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 25 p~~~~~~~i~~li~~G~~~~RlN~shg~~---------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
+.....+.++.|-+.|+|++||-++.... +...+.++.+=+.+.+.| +.+++|+-..
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vild~H~~ 124 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK--MYVILNTHHD 124 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEeCCCc
Confidence 44457889999999999999998865421 223334444444444556 5588998753
No 260
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=43.03 E-value=1.1e+02 Score=30.11 Aligned_cols=171 Identities=12% Similarity=0.098 Sum_probs=0.0
Q ss_pred cHHHHHhcccccCCCEEEEc---------CCC-----ChhHHHHHHHHHhccCCCceEEEE--ecCHHHHhcHHHHHhc-
Q 010627 189 DKEDILKWGIPNQIDMIALS---------FVR-----KGSDLVGVRKLLGGHAKNILLMSK--VENQEGVANFDDILAN- 251 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~s---------fV~-----sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~- 251 (505)
+.+.. +..-+.|++.|.+= |-. +.++++++++.. .+++++| |-. ++..+.+.+.
T Consensus 30 ~~e~A-~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaG 100 (297)
T 4adt_A 30 NVEQA-KIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELK 100 (297)
T ss_dssp SHHHH-HHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTT
T ss_pred cHHHH-HHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcC
Q ss_pred CCeeEEecCcccCcCCchhHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeeccc
Q 010627 252 SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNI--QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 329 (505)
Q Consensus 252 sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~--~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~E 329 (505)
+|+| |....+...+ ++..+++ .|.++++-.. -..+...++..|+|.|-..++
T Consensus 101 AD~I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~v~--------------~~~Ea~~a~~~Gad~I~v~g~ 154 (297)
T 4adt_A 101 VDML-----DESEVLTMAD-------EYNHINKHKFKTPFVCGCT--------------NLGEALRRISEGASMIRTKGE 154 (297)
T ss_dssp CSEE-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEES--------------SHHHHHHHHHHTCSEEEECCC
T ss_pred CCEE-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEEeC--------------CHHHHHHHHhCCCCEEEECCC
Q ss_pred CCCCCCHHHHHHHHHHHHHHH---------------hcccCchhhHHhhhhCCCCCCC--chhhH-HHHHHHHHHhcCCc
Q 010627 330 TAAGAYPEVAVRTMAQICVEA---------------ESTLDYGDVFKRVMQHSPVPMS--PLESL-ASSAVRTANSARAT 391 (505)
Q Consensus 330 ta~G~yP~~~V~~m~~i~~~a---------------E~~~~~~~~~~~~~~~~~~~~~--~~~~i-a~~av~~a~~~~a~ 391 (505)
+-...-+++|+++..+..+. -....-..+..++....+.|.- ..--| ...-+..+...+|+
T Consensus 155 -~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAd 233 (297)
T 4adt_A 155 -AGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMD 233 (297)
T ss_dssp -TTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCS
T ss_pred -cCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCC
Q ss_pred EEEE
Q 010627 392 LILV 395 (505)
Q Consensus 392 ~Ivv 395 (505)
++++
T Consensus 234 gVlV 237 (297)
T 4adt_A 234 GVFV 237 (297)
T ss_dssp CEEE
T ss_pred EEEE
No 261
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=42.78 E-value=1.1e+02 Score=28.17 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=32.7
Q ss_pred cHHHHHhcccccCCCEEEEcCC-----CChhHHHHHHHHHhccCCCce
Q 010627 189 DKEDILKWGIPNQIDMIALSFV-----RKGSDLVGVRKLLGGHAKNIL 231 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV-----~sa~dv~~v~~~l~~~~~~~~ 231 (505)
+..+..+.+.++|+|+|=+... .+++++.++++.+.+.|-.+.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 4455548889999999987643 368889999999988775433
No 262
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=42.69 E-value=35 Score=33.73 Aligned_cols=73 Identities=11% Similarity=0.133 Sum_probs=44.7
Q ss_pred CChhcHHHHHhcccccCCCEEEEcCCC------------------C--------hhHHHHHHHHHhccCCCceEEE--Ee
Q 010627 185 LTEKDKEDILKWGIPNQIDMIALSFVR------------------K--------GSDLVGVRKLLGGHAKNILLMS--KV 236 (505)
Q Consensus 185 lte~D~~di~~~al~~g~d~V~~sfV~------------------s--------a~dv~~v~~~l~~~~~~~~Iia--kI 236 (505)
++..|...+.+.+.+.|+|+|.++.-. + .+.+.++++.+ +.++.||+ -|
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~~~ipVi~~GGI 298 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---NGRLPIIGVGGI 298 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---TTSSCEEEESSC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---CCCCCEEEECCC
Confidence 565665555578889999999987321 1 13344445444 33577777 47
Q ss_pred cCHHHHhcHHHHHhcCCeeEEecCcc
Q 010627 237 ENQEGVANFDDILANSDAFMVARGDL 262 (505)
Q Consensus 237 Et~~av~nldeI~~~sDgImIaRgDL 262 (505)
.|++-+. +-|..-+|+|++||+=|
T Consensus 299 ~~~~da~--~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 299 DSVIAAR--EKIAAGASLVQIYSGFI 322 (336)
T ss_dssp CSHHHHH--HHHHHTCSEEEESHHHH
T ss_pred CCHHHHH--HHHHCCCCEEEeeHHHH
Confidence 7665442 22333489999998644
No 263
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=42.63 E-value=1.1e+02 Score=30.65 Aligned_cols=130 Identities=17% Similarity=0.140 Sum_probs=67.1
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEcCC-------------CChhH------------HHHHHHHHhc-cCCCc
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALSFV-------------RKGSD------------LVGVRKLLGG-HAKNI 230 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~sfV-------------~sa~d------------v~~v~~~l~~-~~~~~ 230 (505)
.||..|.+.+. +.+.+.|+|+|=+... +...| +.++.+.+++ .+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 57888777663 4677899999877542 22111 2233333333 35567
Q ss_pred eEEEEecC---H----HHHhcHHHHHh----c-CCeeEEecCcccCc--CCchhHHHHHHHHHHHH-HHcCCCeEEehhh
Q 010627 231 LLMSKVEN---Q----EGVANFDDILA----N-SDAFMVARGDLGME--IPIEKIFLAQKVMIYKC-NIQGKPVVTATQM 295 (505)
Q Consensus 231 ~IiakIEt---~----~av~nldeI~~----~-sDgImIaRgDLg~e--~~~~~v~~~qk~Ii~~~-~~~gkpvi~ATqm 295 (505)
.|..||-- . ..++..-++++ . .|.|-+.-|...-. .+... ..+...++.. +..+.|++....+
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEECSST
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEeCCC
Confidence 78888831 1 12333333333 2 58888865543221 11110 0111122222 2347999875432
Q ss_pred hHhhhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 296 LESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 296 LeSM~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
- |. .+...++..| +|+|++.
T Consensus 305 ~---------s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 305 G---------TP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp T---------SH---HHHHHHHHTTSCSEEECC
T ss_pred C---------CH---HHHHHHHHCCCccEEEec
Confidence 1 22 2345677788 9999984
No 264
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=42.57 E-value=26 Score=35.01 Aligned_cols=84 Identities=19% Similarity=0.301 Sum_probs=58.1
Q ss_pred CceEEEEecCH--------HHHhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhh
Q 010627 229 NILLMSKVENQ--------EGVANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESM 299 (505)
Q Consensus 229 ~~~IiakIEt~--------~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM 299 (505)
.++++++.|+. .-...++.++.. ..+|++.|||+- | +.+++.|+++|.|++. |.
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~---p--------eelie~A~~~~IPVL~-T~----- 111 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP---P--------EELIEAAKEHETPLIT-SK----- 111 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC---C--------HHHHHHHHHTTCCEEE-CC-----
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC---C--------HHHHHHHHHCCCeEEE-EC-----
Confidence 56777766652 223445555542 469999999984 2 2478999999999884 43
Q ss_pred hcCCCCChHHHHHHHHHHHc----------------CCceeeecccCCCCC
Q 010627 300 IKSPRPTRAEATDVANAVLD----------------GTDCVMLSGETAAGA 334 (505)
Q Consensus 300 ~~~~~ptraEv~Dv~nav~~----------------G~D~imLs~Eta~G~ 334 (505)
.+|-.=+..+.+++.. | -++++.|++-.||
T Consensus 112 ----~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g-~~vl~~G~sG~GK 157 (314)
T 1ko7_A 112 ----IATTQLMSRLTTFLEHELARTTSLHGVLVDVYG-VGVLITGDSGIGK 157 (314)
T ss_dssp ----SCHHHHHHHHHHHHHHHTCEEEEEESEEEEETT-EEEEEEESTTSSH
T ss_pred ----CchhHHHHHHHHHHHHhhccceeeeEEEEEECC-EEEEEEeCCCCCH
Confidence 4444455666777665 4 5899999999998
No 265
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=42.49 E-value=76 Score=31.97 Aligned_cols=46 Identities=22% Similarity=0.329 Sum_probs=34.7
Q ss_pred HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 32 MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 32 ~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
..+++.++|.+.+.+...|++.++-.+.++.+|++. |.-+.|++|.
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G~d~~l~vDa 191 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---GSSITMILDA 191 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---CTTSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---CCCCEEEEEC
Confidence 345677899999999999988888888888888863 3234455554
No 266
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=42.48 E-value=1.7e+02 Score=28.32 Aligned_cols=98 Identities=9% Similarity=-0.097 Sum_probs=58.9
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEec
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaR 259 (505)
.+.+.++.++.|+|++++. +.-|.++=.++-+...+.... ||+-+= +.++++....-.+. +|++|+-+
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 99 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHS 99 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3344478889999999862 444555555555554443333 888874 46777666665554 69999965
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-...--.+.+.+...-+.| |.+.+.|+++-
T Consensus 100 P~y~~~~s~~~l~~~f~~v---a~a~~lPiilY 129 (288)
T 2nuw_A 100 PYYFPRLPEKFLAKYYEEI---ARISSHSLYIY 129 (288)
T ss_dssp CCSSCSCCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4432212334544444444 45568999863
No 267
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=42.48 E-value=1.4e+02 Score=29.08 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=71.7
Q ss_pred cHHHHHhcccccCCCEEEE-----cCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHh---cHHHHHhc-CCeeEEec
Q 010627 189 DKEDILKWGIPNQIDMIAL-----SFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVA---NFDDILAN-SDAFMVAR 259 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~---nldeI~~~-sDgImIaR 259 (505)
|...+.+...+.|+++|.+ -|-.+.+++.++++.. +++|+.|= .+. .+++.... +|+|++.-
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~Kd----fi~d~~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRKD----FLFDPYQVYEARSWGADCILIIM 150 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEES----CCCSTHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEECC----ccCCHHHHHHHHHcCCCEEEEcc
Confidence 4445545556789999987 3558999999998754 46777661 112 24443333 79999986
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.+|. . .--+.+++.|+..|.-+++-++ |..| +..|...|+|.|-.+
T Consensus 151 a~L~----~----~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGin 196 (272)
T 3tsm_A 151 ASVD----D----DLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVN 196 (272)
T ss_dssp TTSC----H----HHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEE
T ss_pred cccC----H----HHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEEC
Confidence 6662 1 2346788889999998887543 3333 456778899987665
No 268
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=42.40 E-value=1.8e+02 Score=27.29 Aligned_cols=124 Identities=14% Similarity=0.106 Sum_probs=72.0
Q ss_pred hcccccCCCEEEE-----cCCCC----hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccC
Q 010627 195 KWGIPNQIDMIAL-----SFVRK----GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 195 ~~al~~g~d~V~~-----sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+.+ +.|+|++-+ .||.+ +..++++|++. +..+-+--||++++.. ++..+++ +|+|.+-.
T Consensus 20 ~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh~----- 88 (231)
T 3ctl_A 20 EFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDY--IAQLARAGADFITLHP----- 88 (231)
T ss_dssp HHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGT--HHHHHHHTCSEEEECG-----
T ss_pred HHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHHH--HHHHHHcCCCEEEECc-----
Confidence 555 778887533 33333 45666666542 3345677788987553 5666665 79998852
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee-cccCCCC--CCHHHHHH
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGETAAG--AYPEVAVR 341 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL-s~Eta~G--~yP~~~V~ 341 (505)
|-+ -+. -.+.++.++++|+-++++. ||. |..| ....+.+++|.+++ |-+.-.| +|.-.+++
T Consensus 89 Ea~---~~~-~~~~i~~i~~~G~k~gv~l--------np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~ 152 (231)
T 3ctl_A 89 ETI---NGQ-AFRLIDEIRRHDMKVGLIL--------NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIPEMLD 152 (231)
T ss_dssp GGC---TTT-HHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCTTHHH
T ss_pred ccC---Ccc-HHHHHHHHHHcCCeEEEEE--------ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccHHHHH
Confidence 220 112 2588999999999999864 332 2222 13345568998864 5555444 34434444
Q ss_pred HHHH
Q 010627 342 TMAQ 345 (505)
Q Consensus 342 ~m~~ 345 (505)
-+++
T Consensus 153 kI~~ 156 (231)
T 3ctl_A 153 KLAE 156 (231)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
No 269
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=42.25 E-value=1.6e+02 Score=26.94 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=28.5
Q ss_pred cHHHHHhcccccCCCEEEEcCCC------ChhHHHHHHHHHhccCCC
Q 010627 189 DKEDILKWGIPNQIDMIALSFVR------KGSDLVGVRKLLGGHAKN 229 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~------sa~dv~~v~~~l~~~~~~ 229 (505)
+..+..+.+.+.|+|+|=+.... +..++.++++.+.+.|-.
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 61 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIK 61 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCE
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCC
Confidence 33343378889999999987222 346778888888877644
No 270
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=41.83 E-value=50 Score=31.62 Aligned_cols=128 Identities=12% Similarity=0.044 Sum_probs=69.4
Q ss_pred HHHhcccccCCCEEEEcCC-CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh-cCCeeEEecCcccC-cCCc
Q 010627 192 DILKWGIPNQIDMIALSFV-RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA-NSDAFMVARGDLGM-EIPI 268 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV-~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-~sDgImIaRgDLg~-e~~~ 268 (505)
.+ ..++..|+|+|.+.-. -+ ++++++-+...+.| +..+.-+.+.+-++ ..++ -+|.|-+..-+|.. ...+
T Consensus 120 qi-~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG--l~~lvev~~~~E~~---~a~~~gad~IGvn~~~l~~~~~dl 192 (254)
T 1vc4_A 120 ML-EEARAFGASAALLIVALLG-ELTGAYLEEARRLG--LEALVEVHTERELE---IALEAGAEVLGINNRDLATLHINL 192 (254)
T ss_dssp HH-HHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT--CEEEEEECSHHHHH---HHHHHTCSEEEEESBCTTTCCBCT
T ss_pred HH-HHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC--CeEEEEECCHHHHH---HHHHcCCCEEEEccccCcCCCCCH
Confidence 55 6678899999987422 11 45555544333444 33344444443332 2222 25888777655542 1122
Q ss_pred hhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHH
Q 010627 269 EKIFLAQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTM 343 (505)
Q Consensus 269 ~~v~~~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m 343 (505)
+.. +++....... +.|++.. ...-|.+ |+..... |+|+++...---.+..|.++++-|
T Consensus 193 ~~~----~~L~~~i~~~~~~~~vIAe---------gGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 193 ETA----PRLGRLARKRGFGGVLVAE---------SGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp THH----HHHHHHHHHTTCCSEEEEE---------SCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred HHH----HHHHHhCccccCCCeEEEE---------cCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 222 2333333333 5676642 2333444 5566667 999999965555567788877655
No 271
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=41.69 E-value=82 Score=30.97 Aligned_cols=111 Identities=16% Similarity=0.130 Sum_probs=74.1
Q ss_pred ccccCCCEEEEcCCCC--------------hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcc
Q 010627 197 GIPNQIDMIALSFVRK--------------GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDL 262 (505)
Q Consensus 197 al~~g~d~V~~sfV~s--------------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDL 262 (505)
+.+.+..+|+-++.+. .+-++.++++..+.| +.+++-+-.+..++ .+.+..|.+-|+-+++
T Consensus 47 ~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~G--lp~~Tev~d~~~v~---~l~~~vd~lqIgA~~~ 121 (285)
T 3sz8_A 47 TRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFG--VPVITDVHEAEQAA---PVAEIADVLQVPAFLA 121 (285)
T ss_dssp HHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHC--CCEEEECCSGGGHH---HHHTTCSEEEECGGGT
T ss_pred HHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC--CeEEEEeCCHHHHH---HHHHhCCEEEECcccc
Confidence 3345677777763332 366777888886654 77888777766654 4455699999997666
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH-cCCceeeecccCC
Q 010627 263 GMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGETA 331 (505)
Q Consensus 263 g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~-~G~D~imLs~Eta 331 (505)
. ..+ +++++.+.||||++.|-|- -|-.|+...+..+. .|.+-++|..=+.
T Consensus 122 ~------n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 122 R------QTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp T------CHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred C------CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4 222 5555667999999976653 35567766677654 5888788854443
No 272
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=41.57 E-value=91 Score=29.48 Aligned_cols=114 Identities=10% Similarity=0.075 Sum_probs=60.7
Q ss_pred ccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCe-eEEec-Cc-ccCcCCchhHHH
Q 010627 197 GIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDA-FMVAR-GD-LGMEIPIEKIFL 273 (505)
Q Consensus 197 al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDg-ImIaR-gD-Lg~e~~~~~v~~ 273 (505)
+.+.|+|+|.++-.. .+++.++.+.+++.|.+..+...-. ...+.+.++.+..++ +.+.. .. -|..-+.. +.
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g~~~i~~~a~~--t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKNNNLELVLLTTPA--IPEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHHTTCEECEEECTT--SCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHHcCCceEEEECCC--CCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 467799999987543 3567777777776664422222222 234566777776664 43432 11 12211221 12
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 274 AQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 274 ~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
....+-+..+..+.|+++..- .=|. .++..+...|+|++...
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGG---------I~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFG---------ISKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 222222223334789887543 2222 34455666799999874
No 273
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=41.32 E-value=42 Score=33.67 Aligned_cols=61 Identities=13% Similarity=0.215 Sum_probs=41.0
Q ss_pred eEEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 17 TKIVCTLGPASRSVP----MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 17 tkIi~TiGp~~~~~~----~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
....+|.|....+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++. |..+.+++|.
T Consensus 134 v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G~d~~l~vDa 198 (371)
T 2ovl_A 134 VPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---GDSFPLMVDA 198 (371)
T ss_dssp EEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---CTTSCEEEEC
T ss_pred eeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 445556553222443 345678899999999999999888888888888864 3223345554
No 274
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.08 E-value=76 Score=30.82 Aligned_cols=90 Identities=13% Similarity=0.254 Sum_probs=50.8
Q ss_pred HHHHHhcccccCCCE--EEEcC---CCChhHHHH-----------------HHHHHhccCCCceEEEEe-cCH---HHHh
Q 010627 190 KEDILKWGIPNQIDM--IALSF---VRKGSDLVG-----------------VRKLLGGHAKNILLMSKV-ENQ---EGVA 243 (505)
Q Consensus 190 ~~di~~~al~~g~d~--V~~sf---V~sa~dv~~-----------------v~~~l~~~~~~~~IiakI-Et~---~av~ 243 (505)
.+.+ +...+.|+|+ +.+|| +-+..-|++ +.+.+++.+.+++++.+. .++ -|++
T Consensus 37 ~~~~-~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 37 LAIM-QTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHH-HHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHH-HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 4444 5556789997 56778 112222222 222233333466776663 232 2555
Q ss_pred cHHHHHhc--CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeE
Q 010627 244 NFDDILAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVV 290 (505)
Q Consensus 244 nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi 290 (505)
++-+-+.. .||+++. ++|+++ .....+.|+++|...+
T Consensus 116 ~f~~~~~~aGvdGvIip------Dlp~ee----~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIA------DVPTNE----SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp HHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCCCEEEEC------CCCHHH----HHHHHHHHHHcCCeEE
Confidence 55444433 6999994 455554 4668889999998654
No 275
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=40.90 E-value=25 Score=36.29 Aligned_cols=43 Identities=21% Similarity=0.390 Sum_probs=34.3
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHH
Q 010627 21 CTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRT 65 (505)
Q Consensus 21 ~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~ 65 (505)
+.+|+.. .+.++.++++|++++=|+.+||..+...+.++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999988777777777765
No 276
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=40.43 E-value=44 Score=41.65 Aligned_cols=119 Identities=9% Similarity=0.011 Sum_probs=72.0
Q ss_pred HHHHhcccccCCCE--EEEcCCCChhHHHHHHHHHhccCCCceEEEEecCH-HHHhcHHHHHhc-CCeeE---EecCccc
Q 010627 191 EDILKWGIPNQIDM--IALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQ-EGVANFDDILAN-SDAFM---VARGDLG 263 (505)
Q Consensus 191 ~di~~~al~~g~d~--V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~-~av~nldeI~~~-sDgIm---IaRgDLg 263 (505)
+.+ +.+++.|++. |.+++=.- ..+++.+++++. .++++..+-+. +|.+....+.+. +|+|+ +--+|=|
T Consensus 657 ~~~-~~~~~~gv~i~gv~~~~G~p--~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaG 731 (2060)
T 2uva_G 657 PLL-GRLRADGVPIEGLTIGAGVP--SIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGG 731 (2060)
T ss_dssp HHH-HHHHTTTCCEEEEEEESSCC--CHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSS
T ss_pred HHH-HHHHHcCCCcceEeecCCCC--CHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCC
Confidence 455 7788899998 77776431 223344566555 35566665443 344443444554 79998 5434555
Q ss_pred CcCCchhHHHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHH-----------HcCCceeee
Q 010627 264 MEIPIEKIFLAQKVMIYKCNI-QGKPVVTATQMLESMIKSPRPTRAEATDVANAV-----------LDGTDCVML 326 (505)
Q Consensus 264 ~e~~~~~v~~~qk~Ii~~~~~-~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav-----------~~G~D~imL 326 (505)
-+.+.+++....-.++...++ .+.|+|.|..+- .-.|++.++ ..|+||+++
T Consensus 732 GH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------------~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 732 GHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------------GSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC------------SHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC------------CHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 555543322222234444443 479999887654 346889999 999999988
No 277
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=40.41 E-value=2.1e+02 Score=26.40 Aligned_cols=142 Identities=15% Similarity=0.192 Sum_probs=86.1
Q ss_pred ceEEEEecCHHHHhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH
Q 010627 230 ILLMSKVENQEGVANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRA 308 (505)
Q Consensus 230 ~~IiakIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptra 308 (505)
-+|||-|=+.+. +++.++. ++.+++.-||++ --+.+++.++++||++++--.+. ..-.+.+.
T Consensus 10 ~piI~Avr~~~~---l~~al~s~~~~ifll~g~i~----------~l~~~v~~lk~~~K~v~Vh~Dli----~Gls~d~~ 72 (192)
T 3kts_A 10 QSIIPAAHNQKD---MEKILELDLTYMVMLETHVA----------QLKALVKYAQAGGKKVLLHADLV----NGLKNDDY 72 (192)
T ss_dssp CCEEEEESSSHH---HHHHTTSSCCEEEECSEETT----------THHHHHHHHHHTTCEEEEEGGGE----ETCCCSHH
T ss_pred CCEEEEecCHHH---HHHHHcCCCCEEEEecCcHH----------HHHHHHHHHHHcCCeEEEecCch----hccCCcHH
Confidence 468886665444 4554443 589999888874 24678889999999999855444 44456655
Q ss_pred HHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC-chhhHHhhhhCCCCCCCchhhHH-HHHHHHHH
Q 010627 309 EATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD-YGDVFKRVMQHSPVPMSPLESLA-SSAVRTAN 386 (505)
Q Consensus 309 Ev~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~-~~~~~~~~~~~~~~~~~~~~~ia-~~av~~a~ 386 (505)
-+.-+.+ ..++|+++-+. ..+++..++ ..+. -+..| ..|+.+ ..+++...
T Consensus 73 ai~fL~~--~~~pdGIIsTk--------~~~i~~Ak~------~gL~tIqR~F------------liDS~al~~~~~~i~ 124 (192)
T 3kts_A 73 AIDFLCT--EICPDGIISTR--------GNAIMKAKQ------HKMLAIQRLF------------MIDSSAYNKGVALIQ 124 (192)
T ss_dssp HHHHHHH--TTCCSEEEESC--------HHHHHHHHH------TTCEEEEEEE------------CCSHHHHHHHHHHHH
T ss_pred HHHHHHh--CCCCCEEEeCc--------HHHHHHHHH------CCCeEEEEEE------------EEEcchHHHHHHHHh
Confidence 4444443 45899988762 233333222 1110 01111 234555 46677777
Q ss_pred hcCCcEEEEEcCCchHHHHHHhh--CCCCcEEEE
Q 010627 387 SARATLILVLTRGGSTAKLVAKY--RPGMPILSV 418 (505)
Q Consensus 387 ~~~a~~Ivv~T~sG~ta~~ls~~--RP~~pIiav 418 (505)
+.+.++|=++ .|-....+.+. +..+||||.
T Consensus 125 ~~~PD~iEiL--PGi~p~iI~~i~~~~~~PiIaG 156 (192)
T 3kts_A 125 KVQPDCIELL--PGIIPEQVQKMTQKLHIPVIAG 156 (192)
T ss_dssp HHCCSEEEEE--CTTCHHHHHHHHHHHCCCEEEE
T ss_pred hcCCCEEEEC--CchhHHHHHHHHHhcCCCEEEE
Confidence 8888988666 45555544443 367899998
No 278
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=40.31 E-value=1.8e+02 Score=28.37 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=55.9
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++. ..||+..|- ..+-.|..+.+. |-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg---------~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 40 NYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGTG---------SNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCCC---------CCCHHHHHHHHHHHHhcCC
Confidence 333443 6999984 3222 234445555555555555432 478886543 344456655555 666799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--..--+.+.++....|+.++.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996543323345677788888876654
No 279
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=40.21 E-value=1.3e+02 Score=29.28 Aligned_cols=83 Identities=13% Similarity=0.140 Sum_probs=53.9
Q ss_pred CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccC
Q 010627 252 SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGET 330 (505)
Q Consensus 252 sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~g-kpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Et 330 (505)
+|.||--...-|...|+.. +...+.+.+. ... .|||++.. +-| -+|++.++..|+|++++..=-
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~t---psDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LGL---PSHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CCS---HHHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CCC---HHHHHHHHHcCCCEEEEChHH
Confidence 6777764444555555544 3333333221 234 79997543 222 357899999999999998777
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 010627 331 AAGAYPEVAVRTMAQICVE 349 (505)
Q Consensus 331 a~G~yP~~~V~~m~~i~~~ 349 (505)
+.++.|.+-.+.|..-+++
T Consensus 211 ~~a~dP~~ma~af~~Av~a 229 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVEA 229 (268)
T ss_dssp HTSSSHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHH
Confidence 7888998877777665443
No 280
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=40.19 E-value=2.7e+02 Score=27.15 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=25.8
Q ss_pred HhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010627 386 NSARATLILVLTRGGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 386 ~~~~a~~Ivv~T~sG~ta~~ls~~RP~~pIiav 418 (505)
.+.+|.+|++--..-..++.+++--+ +|+|.+
T Consensus 189 ~eAGA~~ivlE~vp~~~a~~it~~l~-iP~igI 220 (281)
T 1oy0_A 189 AEAGAFAVVMEMVPAELATQITGKLT-IPTVGI 220 (281)
T ss_dssp HHHTCSEEEEESCCHHHHHHHHHHCS-SCEEEE
T ss_pred HHcCCcEEEEecCCHHHHHHHHHhCC-CCEEEe
Confidence 45799999998766677888887654 999998
No 281
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=40.02 E-value=2.6e+02 Score=26.95 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=57.7
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++ -..||+..+- ..+-.|..+.+. |-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGTG---------TNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------cccHHHHHHHHHHHHHcCC
Confidence 333433 6999985 3222 22344554455555555542 3468886542 344556655554 666799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
|++|+..=--..--+-+.++..+.|+.++.-
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 9999974433333457788899999888854
No 282
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=39.99 E-value=1.4e+02 Score=26.72 Aligned_cols=123 Identities=7% Similarity=0.009 Sum_probs=65.6
Q ss_pred HHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhH
Q 010627 192 DILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKI 271 (505)
Q Consensus 192 di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v 271 (505)
.+ +.+.+.|+|+| ++-.-.++-++ ++++. .+.+++-+-|+.-+.. ..-.-+|.+-+-++++. ++
T Consensus 75 ~~-~~a~~~Gad~i-v~~~~~~~~~~----~~~~~--g~~vi~g~~t~~e~~~--a~~~Gad~vk~~~~~~~---g~--- 138 (205)
T 1wa3_A 75 QC-RKAVESGAEFI-VSPHLDEEISQ----FCKEK--GVFYMPGVMTPTELVK--AMKLGHTILKLFPGEVV---GP--- 138 (205)
T ss_dssp HH-HHHHHHTCSEE-ECSSCCHHHHH----HHHHH--TCEEECEECSHHHHHH--HHHTTCCEEEETTHHHH---HH---
T ss_pred HH-HHHHHcCCCEE-EcCCCCHHHHH----HHHHc--CCcEECCcCCHHHHHH--HHHcCCCEEEEcCcccc---CH---
Confidence 45 66778899999 55444443333 33333 4677876656542221 11112577766432211 11
Q ss_pred HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCC---HHHHHHHHHHHH
Q 010627 272 FLAQKVMIYKCNIQ-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAY---PEVAVRTMAQIC 347 (505)
Q Consensus 272 ~~~qk~Ii~~~~~~-gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~y---P~~~V~~m~~i~ 347 (505)
..+-+..... +.|++.+.-+ +. .++..+...|+|++....-... .. |.+.++.+.+++
T Consensus 139 ----~~~~~l~~~~~~~pvia~GGI----------~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~ 200 (205)
T 1wa3_A 139 ----QFVKAMKGPFPNVKFVPTGGV----------NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKI 200 (205)
T ss_dssp ----HHHHHHHTTCTTCEEEEBSSC----------CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhCCCCcEEEcCCC----------CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHH
Confidence 1122222233 6787765432 21 2557777889999998644333 45 777776666554
Q ss_pred H
Q 010627 348 V 348 (505)
Q Consensus 348 ~ 348 (505)
+
T Consensus 201 ~ 201 (205)
T 1wa3_A 201 R 201 (205)
T ss_dssp H
T ss_pred H
Confidence 3
No 283
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=39.97 E-value=2.2e+02 Score=27.55 Aligned_cols=90 Identities=16% Similarity=0.178 Sum_probs=55.1
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHH-HHHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~-nav~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++. ..||++.|- ..+-.|..+.+ .|-..|+|++|+..
T Consensus 42 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 42 TDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAK-RVPVIAGTG---------ANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 6999984 2222 234455555555555555532 468887542 34455665544 46678999999964
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
=--...-+-+.++..+.|+.++.-
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~l 134 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATSI 134 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 332333356788888888887753
No 284
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=39.91 E-value=2.3e+02 Score=27.37 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=56.1
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++. ..||+..|- ..+-.|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGTG---------GNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 6999984 2221 234445544555555555432 478876542 345566666555 666799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997433223335677888888887664
No 285
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=39.79 E-value=95 Score=31.05 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=61.9
Q ss_pred hcHHHHHhcccccCCCEEEEcC----------------CCChhHHHHHHHHHhccCCCceEEEEecC-------H-HHHh
Q 010627 188 KDKEDILKWGIPNQIDMIALSF----------------VRKGSDLVGVRKLLGGHAKNILLMSKVEN-------Q-EGVA 243 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sf----------------V~sa~dv~~v~~~l~~~~~~~~IiakIEt-------~-~av~ 243 (505)
.+.....+.+.+.|+|+|-+.+ .++++.+.++-+.+.+.- ++.|..||-. . +.++
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHH
Confidence 3344443777788999998865 233444554444444322 4678888731 1 1222
Q ss_pred cHHHHHhc-CCeeEEecCc--ccCc------CCchhHHHHHHHHHHHH-HHc-CCCeEEehhhhHhhhcCCCCChHHHHH
Q 010627 244 NFDDILAN-SDAFMVARGD--LGME------IPIEKIFLAQKVMIYKC-NIQ-GKPVVTATQMLESMIKSPRPTRAEATD 312 (505)
Q Consensus 244 nldeI~~~-sDgImIaRgD--Lg~e------~~~~~v~~~qk~Ii~~~-~~~-gkpvi~ATqmLeSM~~~~~ptraEv~D 312 (505)
-+..+.+. .|+|.|-.+. .|.. .+...+ ..+... ... +.|||....+ -|.. |
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~-----~~i~~ik~~~~~iPVianGgI---------~s~e---d 211 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRH-----DWVHRLKGDFPQLTFVTNGGI---------RSLE---E 211 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC----------CCCCCH-----HHHHHHHHHCTTSEEEEESSC---------CSHH---H
T ss_pred HHHHHHHcCCCEEEEecCchhcccCcccccCCCcccH-----HHHHHHHHhCCCCeEEEECCc---------CCHH---H
Confidence 22222222 5899885332 1111 111111 223333 334 7899876543 3333 3
Q ss_pred HHHHHHcCCceeeec
Q 010627 313 VANAVLDGTDCVMLS 327 (505)
Q Consensus 313 v~nav~~G~D~imLs 327 (505)
+..++. |+|+||+.
T Consensus 212 a~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 212 ALFHLK-RVDGVMLG 225 (350)
T ss_dssp HHHHHT-TSSEEEEC
T ss_pred HHHHHh-CCCEEEEC
Confidence 444554 99999995
No 286
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=39.76 E-value=65 Score=32.35 Aligned_cols=46 Identities=20% Similarity=0.251 Sum_probs=34.1
Q ss_pred HHHHHHHhCCcEEEEecCCC------CHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 32 MIEKLLKAGMNVARFNFSHG------SHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 32 ~i~~li~~G~~~~RlN~shg------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
..+++.++|.+.+.+++.|+ +.+.-.++++.+|++. +.-+.|++|.
T Consensus 156 ~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~vDa 207 (382)
T 1rvk_A 156 FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLMIDA 207 (382)
T ss_dssp HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEEEEC
T ss_pred HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 35667889999999999997 7777778888888763 3334455555
No 287
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=39.74 E-value=27 Score=33.17 Aligned_cols=58 Identities=14% Similarity=0.068 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHH
Q 010627 275 QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICV 348 (505)
Q Consensus 275 qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 348 (505)
-...++.++++|++|.+-|- .+ .+ -+..++..++..|+|+|+- .||..+.+.+.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv------~~-~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP------WI-FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC------TT-CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeC------CC-CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36789999999999998772 00 11 1223455667789999886 799999998887764
No 288
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=39.73 E-value=27 Score=28.86 Aligned_cols=41 Identities=12% Similarity=0.000 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~sG~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++.-+++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 45666778889999998888774467888888776 999876
No 289
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=39.51 E-value=1.6e+02 Score=29.29 Aligned_cols=95 Identities=17% Similarity=0.218 Sum_probs=56.6
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .|||++. |--| ..+..++-..+.+..++.++. ..|||+.|- ..+-.|..+.+. |-..|+
T Consensus 59 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Ga 127 (343)
T 2v9d_A 59 DDLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGTG---------GTNARETIELSQHAQQAGA 127 (343)
T ss_dssp HHHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------SSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 333443 6999984 2222 234555555555555555432 478886542 345566666555 566799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.+++
T Consensus 128 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 128 DGIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp SEEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997433223335677888888877654
No 290
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=39.46 E-value=1.2e+02 Score=30.51 Aligned_cols=99 Identities=12% Similarity=-0.050 Sum_probs=60.3
Q ss_pred HHHHHhcccccCCCEEEE------cCCCChhHHHHHHHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEec
Q 010627 190 KEDILKWGIPNQIDMIAL------SFVRKGSDLVGVRKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~------sfV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaR 259 (505)
.+.+.++.++.|+|+|++ .+.-|.++=.++-+. ..+.+++||+-+= +.++++....-.+. +|++|+-+
T Consensus 49 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 49 LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 333337888999999986 344555555555554 2345788999884 46677666655544 79999965
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-...--...+.+...-+.|.++ +.+.|+++-
T Consensus 127 P~y~~~~s~~~l~~~f~~IA~a--a~~lPiilY 157 (344)
T 2hmc_A 127 RVLSRGSVIAAQKAHFKAILSA--APEIPAVIY 157 (344)
T ss_dssp CCSSSTTCHHHHHHHHHHHHHH--STTSCEEEE
T ss_pred CccCCCCCHHHHHHHHHHHHhh--CCCCcEEEE
Confidence 4432212334444444444431 457898863
No 291
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.44 E-value=2.2e+02 Score=27.51 Aligned_cols=90 Identities=19% Similarity=0.204 Sum_probs=55.3
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHH-HHHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~-nav~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++. ..||+..+- ..+-.|..+.+ .|-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGTG---------ANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeCC---------CCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 6999884 2222 334555555555555555542 378886542 34455665554 46678999999964
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
=--..--+-+.++..+.|+.++.-
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~l 128 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVEL 128 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 332233356788888888887753
No 292
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=39.42 E-value=38 Score=28.69 Aligned_cols=42 Identities=12% Similarity=0.266 Sum_probs=33.6
Q ss_pred hHHHHHHHH-HHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 010627 376 SLASSAVRT-ANSARATLILVLTRG--------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 376 ~ia~~av~~-a~~~~a~~Ivv~T~s--------G~ta~~ls~~RP~~pIiav 418 (505)
..+...++. |.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 105 ~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~-~PVlvV 155 (156)
T 3fg9_A 105 DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAP-ISVIVV 155 (156)
T ss_dssp CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCS-SEEEEE
T ss_pred CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCC-CCEEEe
Confidence 356666777 888999999998872 778888888765 999987
No 293
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=39.39 E-value=1e+02 Score=29.47 Aligned_cols=129 Identities=15% Similarity=0.111 Sum_probs=75.1
Q ss_pred HHHhcccccCCCEEEE-----cCCCC----hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEecCc
Q 010627 192 DILKWGIPNQIDMIAL-----SFVRK----GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVARGD 261 (505)
Q Consensus 192 di~~~al~~g~d~V~~-----sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaRgD 261 (505)
++ +...+.|+|++-+ .||.+ +.-++++|+.... ..+-+=-||++++.. ++..+++ +|.|-+..
T Consensus 45 ~i-~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~--~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH~-- 117 (246)
T 3inp_A 45 DV-KAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGIT--AGMDVHLMVKPVDAL--IESFAKAGATSIVFHP-- 117 (246)
T ss_dssp HH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCC--SCEEEEEECSSCHHH--HHHHHHHTCSEEEECG--
T ss_pred HH-HHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCC--CeEEEEEeeCCHHHH--HHHHHHcCCCEEEEcc--
Confidence 44 5666789998887 77653 4667777765311 122333568888664 6666655 79998852
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee-cccCCCCC-----C
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGETAAGA-----Y 335 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL-s~Eta~G~-----y 335 (505)
|-+ +. -.+.++.++++|+-++++.. |. |..| ....+.++.|.+++ |-+.-.|- +
T Consensus 118 ---Ea~-~~----~~~~i~~ir~~G~k~Gvaln--------p~-Tp~e---~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 118 ---EAS-EH----IDRSLQLIKSFGIQAGLALN--------PA-TGID---CLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp ---GGC-SC----HHHHHHHHHTTTSEEEEEEC--------TT-CCSG---GGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred ---ccc-hh----HHHHHHHHHHcCCeEEEEec--------CC-CCHH---HHHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 111 11 25678888999999998742 21 1111 12345567998876 44544443 3
Q ss_pred HHHHHHHHHHHH
Q 010627 336 PEVAVRTMAQIC 347 (505)
Q Consensus 336 P~~~V~~m~~i~ 347 (505)
..+=++.+++.+
T Consensus 178 ~l~KI~~lr~~~ 189 (246)
T 3inp_A 178 MLDKAKEISKWI 189 (246)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444444
No 294
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=39.38 E-value=1.7e+02 Score=29.01 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=56.0
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .|||++. |--| ..+..++-..+.+..++.++. ..|||+.|- ..+-+|..+.+. |-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGIG---------ALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEEC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 333443 7999984 3222 234445545555555555432 478876542 344556666555 566799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996433223334677888888887765
No 295
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=39.33 E-value=1.9e+02 Score=27.91 Aligned_cols=95 Identities=14% Similarity=0.109 Sum_probs=55.6
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+-+..++.++. ..||+..|- ..+-.|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGAG---------SNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 6999984 3221 234445544455555554432 478876542 344556665555 566799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997433222335667788888887664
No 296
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=39.15 E-value=2.1e+02 Score=27.70 Aligned_cols=97 Identities=14% Similarity=0.084 Sum_probs=57.9
Q ss_pred HHHHHh-c-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHc
Q 010627 245 FDDILA-N-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLD 319 (505)
Q Consensus 245 ldeI~~-~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~ 319 (505)
++-.++ . .||+++. |--| ..+..++-..+.+..++.++. ..|||..|- ..+-.|..+.+. |-..
T Consensus 30 v~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQVG---------SVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEecC---------CCCHHHHHHHHHHHHhc
Confidence 344555 3 6999984 3222 234455555555555555432 478876542 334456655554 5667
Q ss_pred CCceeeecccCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 320 GTDCVMLSGETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 320 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
|+|++|+..=--...-+-+.++....|+.++.-
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 131 (293)
T 1f6k_A 99 GYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGS 131 (293)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 999999964332233356778888888877754
No 297
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=39.04 E-value=61 Score=27.72 Aligned_cols=41 Identities=24% Similarity=0.244 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTR---------GGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~---------sG~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~-~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKAN-KPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCC-CCEEEe
Confidence 4667777888999999999875 3788999988665 999987
No 298
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=39.03 E-value=2e+02 Score=28.03 Aligned_cols=95 Identities=13% Similarity=0.172 Sum_probs=56.0
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++ -..|||..+- ..+-.|..+.+. |-..|+
T Consensus 44 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 44 AYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGVG---------TNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp HHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 6999985 3222 23444555555555555543 2478876542 345556665555 666799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 113 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 113 DGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997432222235667788888887664
No 299
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=39.00 E-value=1.8e+02 Score=31.02 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=49.5
Q ss_pred EeCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCcccCCcc------c------------cCCCC-ChhcHHHHHhccc
Q 010627 138 CSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVI------V------------DLPTL-TEKDKEDILKWGI 198 (505)
Q Consensus 138 idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgvnlp~~~------~------------~l~~l-te~D~~di~~~al 198 (505)
++++.+..+|. .++.+. .+-|.=-++..+++|... + -++.. +..|...+.++.-
T Consensus 181 ~~~~~v~~~V~----~gG~L~---~~KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~ 253 (520)
T 3khd_A 181 THEDHVITEVL----NSAVIG---ERKNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLG 253 (520)
T ss_dssp ECSSCEEEEEC----C-CCCC---SSCEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHT
T ss_pred EECCEEEEEEE----eCeEEe---CCceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHH
Confidence 45667777775 222321 233555667777777421 1 11211 5677777744444
Q ss_pred ccCCCEEEEcCCCChhHHHHHHHHHh
Q 010627 199 PNQIDMIALSFVRKGSDLVGVRKLLG 224 (505)
Q Consensus 199 ~~g~d~V~~sfV~sa~dv~~v~~~l~ 224 (505)
+.|.+.-+++++++++-++.+.+++.
T Consensus 254 ~~g~~i~IIAKIE~~eav~nldeIl~ 279 (520)
T 3khd_A 254 PRGRHIKIIPKIENIEGIIHFDKILA 279 (520)
T ss_dssp TTTTTSEEEEEECSHHHHHTHHHHHH
T ss_pred hcCCCCcEEEEECCHHHHHhHHHHHH
Confidence 56777788899999999999988773
No 300
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.97 E-value=2.1e+02 Score=28.12 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=55.6
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHH-HHHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~-nav~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++. ..||++.|- ..+-+|..+.+ .|-..|+|++|+..
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGTG---------ANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 6999984 2222 234455555555555555532 368887542 34455665544 46678999999964
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
=--..--+.+.++....|+.++.-
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 333333356788889999887753
No 301
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=38.86 E-value=2e+02 Score=29.06 Aligned_cols=122 Identities=11% Similarity=-0.010 Sum_probs=62.9
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEc-------------CCCChhH----------------HHHHHHHHhccC
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALS-------------FVRKGSD----------------LVGVRKLLGGHA 227 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~s-------------fV~sa~d----------------v~~v~~~l~~~~ 227 (505)
.||..|.+.+. +.+.+.|+|+|=+. ..+...| ++++|+.+ +
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---g 231 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF---G 231 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHc---C
Confidence 45666655442 45678999999873 3332222 34444444 4
Q ss_pred CCceEEEEecC---H------HHHhcHHHHHh----c-CCeeEEecCcccCcCCchhHHHHHHHHHH-HHHHcCCCeEEe
Q 010627 228 KNILLMSKVEN---Q------EGVANFDDILA----N-SDAFMVARGDLGMEIPIEKIFLAQKVMIY-KCNIQGKPVVTA 292 (505)
Q Consensus 228 ~~~~IiakIEt---~------~av~nldeI~~----~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~-~~~~~gkpvi~A 292 (505)
.+ .|..||-. . ...+..-++++ . .|.|-+..|......+...+ ..++ ..+..+.|++..
T Consensus 232 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~-----~~~~~ik~~~~iPvi~~ 305 (377)
T 2r14_A 232 PE-RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPE-----GFREQMRQRFKGGLIYC 305 (377)
T ss_dssp GG-GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCT-----THHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchH-----HHHHHHHHHCCCCEEEE
Confidence 44 78888721 1 11222333333 2 58888865432110110111 1222 233457898875
Q ss_pred hhhhHhhhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 293 TQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 293 TqmLeSM~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
.. . + ..+...++..| +|+|++.
T Consensus 306 Gg---------i-~---~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 306 GN---------Y-D---AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp SS---------C-C---HHHHHHHHHTTSCSEEEES
T ss_pred CC---------C-C---HHHHHHHHHCCCceEEeec
Confidence 43 2 3 23446677788 9999994
No 302
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=38.74 E-value=92 Score=30.65 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=72.1
Q ss_pred ccccCCCEEEEcCCCC--------------hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcc
Q 010627 197 GIPNQIDMIALSFVRK--------------GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDL 262 (505)
Q Consensus 197 al~~g~d~V~~sfV~s--------------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDL 262 (505)
+.+.|+.+|+-+..+. .+-++.++++..+. .+.+++-+-++..++-+.+ ..|.+-|+-+++
T Consensus 44 ~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~ 118 (288)
T 3tml_A 44 CEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC 118 (288)
T ss_dssp HHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT
T ss_pred HHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECcccc
Confidence 3445888888754432 35677777777655 4788888877777665544 589999997665
Q ss_pred cCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH-cCC------ceeeecccCC
Q 010627 263 GMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGT------DCVMLSGETA 331 (505)
Q Consensus 263 g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~-~G~------D~imLs~Eta 331 (505)
. ..+ +++++.+.||||++.|-|. -|-.|+...+..+. .|. +-++|..=++
T Consensus 119 ~------n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~ 175 (288)
T 3tml_A 119 R------QTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACERGV 175 (288)
T ss_dssp T------CHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE
T ss_pred c------CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC
Confidence 4 233 3445668999999977653 35567766666664 365 5577754433
No 303
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=38.70 E-value=2.1e+02 Score=28.26 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=73.6
Q ss_pred ccCCCEEEEcCCCC--------------hhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccC
Q 010627 199 PNQIDMIALSFVRK--------------GSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGM 264 (505)
Q Consensus 199 ~~g~d~V~~sfV~s--------------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~ 264 (505)
+.+..+|+-++.+. .+-++.++++.++. .+.+++-+-+++.++-+ .+..|.+-||-+++.
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~l---~~~vd~lkIgA~~~~- 143 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCAAV---APVVDVLQIPAFLCR- 143 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHHHH---TTTCSEEEECGGGTT-
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HhhCCEEEECccccC-
Confidence 45677787765443 35677777777665 47888888777766544 455899999976654
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH-cCCceeeecccCC
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGETA 331 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~-~G~D~imLs~Eta 331 (505)
..+ +++++.+.||||++.|-|. -|-.|+...++.+. .|.+-++|..=+.
T Consensus 144 -----n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~erg~ 193 (298)
T 3fs2_A 144 -----QTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLATERGV 193 (298)
T ss_dssp -----CHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEEECCE
T ss_pred -----CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 233 3445557899999976652 35677777777665 4787788854433
No 304
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=38.68 E-value=2.3e+02 Score=25.88 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=28.9
Q ss_pred HHHHHhcccccCCCEEEEcCC------CChhHHHHHHHHHhccCCCc
Q 010627 190 KEDILKWGIPNQIDMIALSFV------RKGSDLVGVRKLLGGHAKNI 230 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV------~sa~dv~~v~~~l~~~~~~~ 230 (505)
..+..+.+.+.|+|+|=+..- .+..++.++++.+.+.|-.+
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 334337888999999988642 14567888899888776443
No 305
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=38.62 E-value=1.9e+02 Score=28.04 Aligned_cols=98 Identities=9% Similarity=-0.036 Sum_probs=57.2
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEec
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaR 259 (505)
.+.+.++.++.|+|++++. +.-|.++=.++-+...+.... ||+-+= +.++++......+. +|++|+.+
T Consensus 22 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 22 LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYA 99 (293)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3333478889999998863 334555555555544433333 888874 36666655554443 69999865
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-...-..+.+.+...-+.| |.+.+.|+++-
T Consensus 100 P~y~~~~s~~~l~~~f~~v---a~a~~lPiilY 129 (293)
T 1w3i_A 100 PYYYPRMSEKHLVKYFKTL---CEVSPHPVYLY 129 (293)
T ss_dssp CCSCSSCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHH---HhhCCCCEEEE
Confidence 4432212344544444544 44568998863
No 306
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=38.45 E-value=1.8e+02 Score=28.06 Aligned_cols=94 Identities=12% Similarity=0.073 Sum_probs=55.2
Q ss_pred HhcccccCCCEEEEc------CCCChhHHHHHHHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEecCccc
Q 010627 194 LKWGIPNQIDMIALS------FVRKGSDLVGVRKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVARGDLG 263 (505)
Q Consensus 194 ~~~al~~g~d~V~~s------fV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaRgDLg 263 (505)
.++.++.|+|++++. +.-|.++=.++-+...+.... ||+-+= +.++++....-.+. +|++|+.+-...
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 102 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYF 102 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 378889999999863 334444444444443333223 888873 46777666665554 699999654442
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 264 MEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 264 ~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
--.+.+.+...-+.| |.+.+.|+++-
T Consensus 103 ~~~s~~~l~~~f~~v---a~a~~lPiilY 128 (286)
T 2r91_A 103 PRLSERQIAKYFRDL---CSAVSIPVFLY 128 (286)
T ss_dssp TTCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 102334444444444 45568998863
No 307
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=38.38 E-value=67 Score=32.13 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCCH----------HHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 27 SRSVPMIEKLLKAGMNVARFNFSHGSH----------EYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 27 ~~~~~~i~~li~~G~~~~RlN~shg~~----------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
..+.+.++.|-+.|+|++||-++.... +...+.++.+=+...+.| +.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G--i~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG--AFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 446889999999999999998865311 122333343334444556 558889875
No 308
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=38.35 E-value=95 Score=31.38 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=52.5
Q ss_pred CChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhc-CCeeEEe-cCcccCcCCchhHHHHHHHHHHHHHHcCC
Q 010627 211 RKGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILAN-SDAFMVA-RGDLGMEIPIEKIFLAQKVMIYKCNIQGK 287 (505)
Q Consensus 211 ~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~~~~~gk 287 (505)
-+.++++.+++.. +.+++.| +-+++- .....+. +|+|.|. .|-=..+.+...+ ..-.++.++. ....
T Consensus 216 ~~~~~i~~lr~~~-----~~PvivK~v~~~e~---a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v-~~~i 285 (368)
T 2nli_A 216 ISPRDIEEIAGHS-----GLPVFVKGIQHPED---ADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERV-NKRV 285 (368)
T ss_dssp CCHHHHHHHHHHS-----SSCEEEEEECSHHH---HHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHH-TTSS
T ss_pred hhHHHHHHHHHHc-----CCCEEEEcCCCHHH---HHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHh-CCCC
Confidence 3567777777754 4578887 333322 2222333 6999993 1110011122222 1222222222 1258
Q ss_pred CeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 288 PVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 288 pvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
|||...-+- --.|+..++..|+|++|+..
T Consensus 286 pVia~GGI~------------~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 286 PIVFDSGVR------------RGEHVAKALASGADVVALGR 314 (368)
T ss_dssp CEEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred eEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 998765432 34688999999999999963
No 309
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=38.33 E-value=2e+02 Score=27.38 Aligned_cols=57 Identities=21% Similarity=0.237 Sum_probs=38.8
Q ss_pred HcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 284 IQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 284 ~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
....|+++..-+ -| -.|+..++..|+|+++...--.....|.++++.+.+.+++...
T Consensus 176 ~~~iPviv~gGI---------~t---~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 176 QAKVPVIVDAGI---------GS---PKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp HCSSCBEEESCC---------CS---HHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCC---------CC---HHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 357899875332 22 2456777888999999965333335698988888887766543
No 310
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=38.25 E-value=1.1e+02 Score=30.24 Aligned_cols=117 Identities=14% Similarity=0.149 Sum_probs=68.7
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.|+.+- .|..+....+...-..|++-+....+. .| .++++...++.++-+..+
T Consensus 85 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~- 148 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNAV- 148 (334)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEE-
T ss_pred HHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCEE-
Confidence 45677888999998763 132222344556667899988775432 12 355555555544321111
Q ss_pred chhhHHhhhhCCCCCCCchhh---HHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPLES---LASSAVRTANSA--RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~--~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
|-.-| .++... ....+.++..++ ..+.||+.+-+|.|.--+++ ..|...|+++
T Consensus 149 ~i~~~----------~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (334)
T 3tbh_A 149 LADQF----------ATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAV 210 (334)
T ss_dssp ECCTT----------TCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECCcc----------CChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 11001 112111 122345666665 47999999999998765554 4799999999
No 311
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=38.22 E-value=1e+02 Score=31.33 Aligned_cols=63 Identities=13% Similarity=0.168 Sum_probs=41.7
Q ss_pred CeEEEEec-CCCCCCHHHH-----HHHHHhCCcEEEEecCCC------CHHHHHHHHHHHHHHHHHcCCeeEEEEecC
Q 010627 16 KTKIVCTL-GPASRSVPMI-----EKLLKAGMNVARFNFSHG------SHEYHQETLNNLRTAMVNTGILCAVMLDTK 81 (505)
Q Consensus 16 ~tkIi~Ti-Gp~~~~~~~i-----~~li~~G~~~~RlN~shg------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 81 (505)
+...-+|+ |.-..+++.+ +++++.|.+.+.+..... +.++-.+.++.+|++ .+.-+.+++|..
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g~~~~l~vDaN 199 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LGPDAVIGFDAN 199 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HCTTCCEEEECT
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 45667787 4433456555 566788999999999654 677777778888775 333334666653
No 312
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.10 E-value=55 Score=32.10 Aligned_cols=97 Identities=11% Similarity=-0.002 Sum_probs=57.9
Q ss_pred HHHhcccccCCCEEEEc------CCCChhHHHHH-HHHHhccCCCceEEEEe---cCHHHHhcHHHHHhc-CCeeEEecC
Q 010627 192 DILKWGIPNQIDMIALS------FVRKGSDLVGV-RKLLGGHAKNILLMSKV---ENQEGVANFDDILAN-SDAFMVARG 260 (505)
Q Consensus 192 di~~~al~~g~d~V~~s------fV~sa~dv~~v-~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-sDgImIaRg 260 (505)
.+.++.++.|+|++++. +--|.++=.++ +...+..+.+++||+-+ -+.++++......+. +|++|+.+-
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 33378889999998643 22233333333 33344445678888877 457777766666554 799998654
Q ss_pred cccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 261 DLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 261 DLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
...- ...+.+...-+. .|.+.+.|+++-
T Consensus 109 ~y~~-~~~~~l~~~f~~---va~a~~lPiilY 136 (300)
T 3eb2_A 109 AYFP-LKDAQIESYFRA---IADAVEIPVVIY 136 (300)
T ss_dssp CSSC-CCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHH---HHHHCCCCEEEE
Confidence 4322 233454444444 445568999863
No 313
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=38.10 E-value=2.8e+02 Score=26.59 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+-. |.......+...-..|++-+...++. . ..++.+...++.++ +..++-
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~---~-~~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER---R-MLAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT---H-HHHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHhc-CCCEeC
Confidence 46677889999987631 21122234455566799987765431 1 34666666666554 322111
Q ss_pred hhhHHhhhhCCCCCCCchhh---HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLES---LASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
.+ | .++... ....+.++..+++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 140 ~~-~----------~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 199 (304)
T 1ve1_A 140 DQ-F----------KNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAV 199 (304)
T ss_dssp CT-T----------TCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEE
T ss_pred CC-C----------CChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 10 1 122111 1223456666664 6999999999999776555 4688999999
No 314
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=38.05 E-value=60 Score=31.12 Aligned_cols=96 Identities=15% Similarity=0.287 Sum_probs=59.8
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe--------cCHHHHhcHHHHHhcCCeeEEecC
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV--------ENQEGVANFDDILANSDAFMVARG 260 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--------Et~~av~nldeI~~~sDgImIaRg 260 (505)
|...+.+.+.+.|++.+++ -.+.++...+.++..+. . .+++-+ +..+-++.+.+.+. .. +|=|
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~-~--~v~~~~GiHP~~~~~~~~~l~~l~~~~~--~~--vaIG 85 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAGR-P--HVWTALGFHPEVVSERAADLPWFDRYLP--ET--RFVG 85 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC-T--TEEECBCCCGGGTTTTGGGTHHHHHHGG--GC--SEEE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC-C--CeEEEEeeCcccccccHHHHHHHHHHhh--hc--cEEE
Confidence 6666558888999998775 46888888887766433 1 233332 22233344444442 23 3446
Q ss_pred cccCcCCch--hHHHHH----HHHHHHHHHcCCCeE-Eeh
Q 010627 261 DLGMEIPIE--KIFLAQ----KVMIYKCNIQGKPVV-TAT 293 (505)
Q Consensus 261 DLg~e~~~~--~v~~~q----k~Ii~~~~~~gkpvi-~AT 293 (505)
.-|.+.-.. .-...| ++.++.|++.++|++ +-+
T Consensus 86 EiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~ 125 (254)
T 3gg7_A 86 EVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHS 125 (254)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 777776543 234455 467888999999999 754
No 315
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=38.03 E-value=59 Score=30.60 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=71.0
Q ss_pred HHHHhcccccCCCEEEE-----cCCCC----hhHHHHHHHHHhccCCCce--EEEEecCHHHHhcHHHHHhc-CCeeEEe
Q 010627 191 EDILKWGIPNQIDMIAL-----SFVRK----GSDLVGVRKLLGGHAKNIL--LMSKVENQEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~-----sfV~s----a~dv~~v~~~l~~~~~~~~--IiakIEt~~av~nldeI~~~-sDgImIa 258 (505)
+++ +...+.|+|++.+ .||.+ ++-++++|+.. +.+.. +--|+++++. -++..+++ +|.|-+.
T Consensus 21 ~~i-~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH 94 (228)
T 3ovp_A 21 AEC-LRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH 94 (228)
T ss_dssp HHH-HHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEE
T ss_pred HHH-HHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc
Confidence 345 6667789999999 88754 46677777764 22233 3346888864 46666665 6999985
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeee-cccCCCCC
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGETAAGA 334 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imL-s~Eta~G~ 334 (505)
- |-+. . -.+.++.++++|+.++++. +|.-.-.. ...+.+.+|.+++ |-++-.|-
T Consensus 95 ~-----Ea~~-~----~~~~i~~i~~~G~k~gval--------~p~t~~e~----l~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 95 L-----EATE-N----PGALIKDIRENGMKVGLAI--------KPGTSVEY----LAPWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp G-----GGCS-C----HHHHHHHHHHTTCEEEEEE--------CTTSCGGG----TGGGGGGCSEEEEESSCTTTCS
T ss_pred c-----CCch-h----HHHHHHHHHHcCCCEEEEE--------cCCCCHHH----HHHHhccCCeEEEeeecCCCCC
Confidence 2 1111 1 2567888899999999874 22111111 2244456888876 44555544
No 316
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=37.90 E-value=1.6e+02 Score=27.10 Aligned_cols=103 Identities=16% Similarity=0.216 Sum_probs=56.6
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe------c-CHHHHhcHHHHHhcCCeeEEecCc
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV------E-NQEGVANFDDILANSDAFMVARGD 261 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI------E-t~~av~nldeI~~~sDgImIaRgD 261 (505)
|.+.+.+.+.+.|++.++.+ -.+.++...+.++..+.. ++....-+ + +.+.++.+++.+.....-.+|=|.
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~-~~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGE 97 (259)
T 1zzm_A 20 DEEASLQRAAQAGVGKIIVP-ATEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGE 97 (259)
T ss_dssp CHHHHHHHHHHTTEEEEEEE-CCSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 44343377788899987665 234677777777665433 32222222 1 223455555555431112234466
Q ss_pred ccCcCCch-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010627 262 LGMEIPIE-KIFLAQ----KVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 262 Lg~e~~~~-~v~~~q----k~Ii~~~~~~gkpvi~AT 293 (505)
.|.+.... .-...| +..++.|.+.|+|+++-|
T Consensus 98 iGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 98 IGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 66664321 112334 566778999999999854
No 317
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=37.83 E-value=1.8e+02 Score=28.34 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=56.3
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++. ..||+..+- ..+-.|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGAG---------SNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEccC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 6999884 3222 234445555555555555432 478886542 344566666555 566799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996432222335667788888887665
No 318
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=37.83 E-value=66 Score=32.08 Aligned_cols=46 Identities=17% Similarity=0.301 Sum_probs=34.1
Q ss_pred HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 32 MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 32 ~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
..+++.++|.+.+.+++.|++.++-.+.++.+|++. |.-+.+++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---GSAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---CSSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 345678899999999999988888888888888863 3223455554
No 319
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=37.61 E-value=55 Score=32.76 Aligned_cols=36 Identities=8% Similarity=0.127 Sum_probs=30.0
Q ss_pred HHHHHHH-hCCcEEEEecCCCCHHHHHHHHHHHHHHH
Q 010627 32 MIEKLLK-AGMNVARFNFSHGSHEYHQETLNNLRTAM 67 (505)
Q Consensus 32 ~i~~li~-~G~~~~RlN~shg~~~~~~~~i~~ir~~~ 67 (505)
..+++++ +|.+.+.+++.|++.++-.+.++.+|++.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~ 185 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV 185 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc
Confidence 3456777 99999999999999888788888888763
No 320
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=37.49 E-value=2e+02 Score=27.36 Aligned_cols=118 Identities=12% Similarity=0.058 Sum_probs=67.3
Q ss_pred hcccccCCCEEEE-----cCCCChhHHHHHHHHHhccCCCceEEEEecCH------------HHHhcHHHHHhc--CCee
Q 010627 195 KWGIPNQIDMIAL-----SFVRKGSDLVGVRKLLGGHAKNILLMSKVENQ------------EGVANFDDILAN--SDAF 255 (505)
Q Consensus 195 ~~al~~g~d~V~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~------------~av~nldeI~~~--sDgI 255 (505)
+.+.+.|+|.|=+ ....+.+++.+.-..+++.-.+.++|.-+-+. +-++-+...++. +|.|
T Consensus 39 ~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~i 118 (257)
T 2yr1_A 39 EEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLV 118 (257)
T ss_dssp HHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEE
T ss_pred HHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 4445567776532 22334555554444444332256777766432 222334444442 4554
Q ss_pred EEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeec
Q 010627 256 MVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLS 327 (505)
Q Consensus 256 mIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs 327 (505)
=| |+...+ ..+++++.+++.|..+|.+-+-+ +..|+..|+...++ +...|+|-+=+.
T Consensus 119 Dv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 119 DY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYF-----DGTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp EE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCC-----CCCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 43 333333 66678888999999999865533 34788888766554 667898876653
No 321
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=37.39 E-value=25 Score=21.40 Aligned_cols=16 Identities=56% Similarity=0.549 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 010627 54 EYHQETLNNLRTAMVN 69 (505)
Q Consensus 54 ~~~~~~i~~ir~~~~~ 69 (505)
++.+++++++|+++-+
T Consensus 3 eeyqemlenlreaevk 18 (26)
T 2dpr_A 3 EEYQEMLENLREAEVK 18 (26)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6788999999998654
No 322
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=37.35 E-value=60 Score=29.82 Aligned_cols=80 Identities=16% Similarity=0.017 Sum_probs=46.8
Q ss_pred hcccccCCCEEEEcCCC--------ChhHHHHHHHHHhccCCCceEEE--EecCHHHHhcHHHHHhc-CCeeEEecCccc
Q 010627 195 KWGIPNQIDMIALSFVR--------KGSDLVGVRKLLGGHAKNILLMS--KVENQEGVANFDDILAN-SDAFMVARGDLG 263 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~--------sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-sDgImIaRgDLg 263 (505)
+.+.+.|+|+|.+.-+. +.+.++++++.. ++++++ =|.+. +|+.+.++. +||+++|++=+.
T Consensus 161 ~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~-----~~pvia~GGi~~~---~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 161 KEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV-----RIPVIASGGAGRV---EHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC-----SSCEEEESCCCSH---HHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc-----CCCEEEeCCCCCH---HHHHHHHHcCCcHHHHHHHHHc
Confidence 66778899999875433 233455554432 455555 24432 455566655 799999986554
Q ss_pred CcCCchhHHHHHHHHHHHHHHcCCCe
Q 010627 264 MEIPIEKIFLAQKVMIYKCNIQGKPV 289 (505)
Q Consensus 264 ~e~~~~~v~~~qk~Ii~~~~~~gkpv 289 (505)
...+. +++.+..+++|.++
T Consensus 233 ~~~~~-------~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLSI-------AQVKRYLKERGVEV 251 (253)
T ss_dssp TSSCH-------HHHHHHHHHTTCBC
T ss_pred CCCCH-------HHHHHHHHHcCCCC
Confidence 44342 33444456666654
No 323
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=37.30 E-value=2.9e+02 Score=26.66 Aligned_cols=104 Identities=12% Similarity=0.058 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCceeeecccCC-------CCCCHHHHHHHHHHHHHHHhcccCchh-----hHHhhhhCCCCCCCchhhH
Q 010627 310 ATDVANAVLDGTDCVMLSGETA-------AGAYPEVAVRTMAQICVEAESTLDYGD-----VFKRVMQHSPVPMSPLESL 377 (505)
Q Consensus 310 v~Dv~nav~~G~D~imLs~Eta-------~G~yP~~~V~~m~~i~~~aE~~~~~~~-----~~~~~~~~~~~~~~~~~~i 377 (505)
..|+..++..|+|.|++..-++ .++=+.|.++.+.++++.+-+.-..-+ .|.- ... ...++ ..
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~--e~~-~~~~~--~~ 160 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGC--PYD-GDVDP--RQ 160 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCB--TTT-BCCCH--HH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC--CcC-CCCCH--HH
Confidence 4678889999999999854332 455677888888888877654311100 0100 000 01122 24
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCch-----HHHHHHhhCCCCc--EEEE
Q 010627 378 ASSAVRTANSARATLILVLTRGGS-----TAKLVAKYRPGMP--ILSV 418 (505)
Q Consensus 378 a~~av~~a~~~~a~~Ivv~T~sG~-----ta~~ls~~RP~~p--Iiav 418 (505)
+...++.+.+.+++.|.+.++.|. ...++...|-..| .|.+
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~ 208 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAG 208 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEE
Confidence 555566677889999988887774 3556777776554 2455
No 324
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=37.27 E-value=29 Score=35.63 Aligned_cols=85 Identities=15% Similarity=0.190 Sum_probs=57.7
Q ss_pred hcHHHHHhccccc-CCCEEEEcC-------CCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEec
Q 010627 188 KDKEDILKWGIPN-QIDMIALSF-------VRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVAR 259 (505)
Q Consensus 188 ~D~~di~~~al~~-g~d~V~~sf-------V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaR 259 (505)
.|...| +.+.+. |+++|-++. +-+.+++.++++.+.+.|-. ++-+|+ +.--+.|.. +.
T Consensus 31 ~d~~~L-~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~---i~~i~s---~~~~~~i~~-------~~ 96 (386)
T 3bdk_A 31 KDPVTL-EEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLE---ITVIES---IPVHEDIKQ-------GK 96 (386)
T ss_dssp TCSSCH-HHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCE---EEEEEC---CCCCHHHHT-------TC
T ss_pred CCHHHH-HHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCE---EEEEec---ccccccccc-------Cc
Confidence 455566 777899 999998762 55678999999999887643 333454 111122221 11
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
. ..++....-++.++.|.+.|.++++-
T Consensus 97 ~------~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 97 P------NRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp T------THHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred H------HHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 14566677889999999999999864
No 325
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=37.17 E-value=97 Score=30.71 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=22.7
Q ss_pred CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 286 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 286 gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
+.|+|...-+- .-.|+..++..|+|++++..
T Consensus 251 ~ipvia~GGI~------------~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGGLQ------------DALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEEcH
Confidence 68888654322 24678888889999999964
No 326
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=37.14 E-value=1.9e+02 Score=28.46 Aligned_cols=90 Identities=12% Similarity=0.019 Sum_probs=55.5
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++. ..||++.|- ..+-.|..+.+. |-..|+|++|+..
T Consensus 59 v~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg---------~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 59 VHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAH-RVPTIVSVS---------DLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 6999984 3222 234445544455555554432 478887542 344556655554 6678999999965
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
=--...-+-+.++....|+.++.-
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~l 151 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIGV 151 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 433333467888899999887753
No 327
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=37.09 E-value=1.2e+02 Score=28.44 Aligned_cols=38 Identities=3% Similarity=-0.010 Sum_probs=28.8
Q ss_pred hcccccCCCEEEEcCCC----ChhHHHHHHHHHhccCCCceE
Q 010627 195 KWGIPNQIDMIALSFVR----KGSDLVGVRKLLGGHAKNILL 232 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~----sa~dv~~v~~~l~~~~~~~~I 232 (505)
+.+.++|+|+|=+..-. +.+++.++++.+.+.|-.+..
T Consensus 28 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 69 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTV 69 (290)
T ss_dssp HHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 67788899999888643 467899999999887654433
No 328
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=36.99 E-value=73 Score=31.30 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=47.6
Q ss_pred HHHHHHHHhccCCCceEEEEecCHHHHhcHHHHH-----------hcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHH
Q 010627 216 LVGVRKLLGGHAKNILLMSKVENQEGVANFDDIL-----------ANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNI 284 (505)
Q Consensus 216 v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~-----------~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~ 284 (505)
++.+++.+.+.|.++.|.+--+.....+|+++++ +-.|.|+-+-.+ +..+..+-++|.+
T Consensus 91 a~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn----------~~~R~~in~~c~~ 160 (292)
T 3h8v_A 91 VQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN----------FEARMTINTACNE 160 (292)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc----------hhhhhHHHHHHHH
Confidence 5566677777788888888776666567777765 345777654322 2466788999999
Q ss_pred cCCCeEEe
Q 010627 285 QGKPVVTA 292 (505)
Q Consensus 285 ~gkpvi~A 292 (505)
+|+|.+.+
T Consensus 161 ~~~Pli~~ 168 (292)
T 3h8v_A 161 LGQTWMES 168 (292)
T ss_dssp HTCCEEEE
T ss_pred hCCCEEEe
Confidence 99998753
No 329
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=36.96 E-value=5.5e+02 Score=29.74 Aligned_cols=127 Identities=15% Similarity=0.070 Sum_probs=81.0
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccC-------------------------------CCceEEEEec
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHA-------------------------------KNILLMSKVE 237 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~-------------------------------~~~~IiakIE 237 (505)
..+++++.|.+.|.+.|++.=-.+...+.++.+.....| ....++.--+
T Consensus 133 ~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAk 212 (1041)
T 3f2b_A 133 SVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQ 212 (1041)
T ss_dssp CHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeC
Confidence 344555889999999999987776666665544432111 0123455556
Q ss_pred CHHHHhcHHHHHhc--------------------CCeeEEecCcccCcCC-------------------------c----
Q 010627 238 NQEGVANFDDILAN--------------------SDAFMVARGDLGMEIP-------------------------I---- 268 (505)
Q Consensus 238 t~~av~nldeI~~~--------------------sDgImIaRgDLg~e~~-------------------------~---- 268 (505)
+.+|..||-.+++. ++|++++.|-+.-++. .
T Consensus 213 N~~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~ 292 (1041)
T 3f2b_A 213 NETGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYK 292 (1041)
T ss_dssp SHHHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGC
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccH
Confidence 89999999888763 2577776554322221 0
Q ss_pred -----------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcC
Q 010627 269 -----------EKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 320 (505)
Q Consensus 269 -----------~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G 320 (505)
+....+.+++++.+++.|+|++ ||+=. +-..|.+++..|+..+...|
T Consensus 293 ~l~~~~~~~~~~~~~~~~~~l~~la~~~~~p~V-AT~dv----hy~~~ed~~~~dvL~~~~~~ 350 (1041)
T 3f2b_A 293 PLIEMDYVKDEEMIKNIIRSIVALGEKLDIPVV-ATGNV----HYLNPEDKIYRKILIHSQGG 350 (1041)
T ss_dssp CC----CCSCHHHHHHHHHHHHHHHHHTTCCEE-ECCCB----SBSSGGGHHHHHHHHHTTGG
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHcCCCEE-EeCCc----eecCHhhHHHHHHHHhhccc
Confidence 1123456889999999999987 66422 23367778888877765444
No 330
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=36.94 E-value=64 Score=31.49 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=24.9
Q ss_pred HHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHH
Q 010627 312 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQIC 347 (505)
Q Consensus 312 Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 347 (505)
|+..+...|+|++++..--.....|.++++.+.+.+
T Consensus 223 d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~ 258 (305)
T 2nv1_A 223 DAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEAT 258 (305)
T ss_dssp HHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHH
Confidence 556666789999999655444456877777665544
No 331
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=36.87 E-value=2.4e+02 Score=29.93 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=49.5
Q ss_pred EeCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCcccCCcc------c-c-----------CCC-CChhcHHHHHhccc
Q 010627 138 CSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVI------V-D-----------LPT-LTEKDKEDILKWGI 198 (505)
Q Consensus 138 idDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgvnlp~~~------~-~-----------l~~-lte~D~~di~~~al 198 (505)
++++.+..+|. .++.+. .+=|.--++..+++|... + . ++. =+..|...+.++.-
T Consensus 172 v~~~~i~~~V~----~gG~L~---~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~ 244 (511)
T 3gg8_A 172 VGSDYVITQAQ----NTATIG---ERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLG 244 (511)
T ss_dssp ECSSEEEEEES----SCEEEC---SSCBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHT
T ss_pred EeCCEEEEEEE----eCeEEc---CCcceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHH
Confidence 45667777765 222221 244666677777777421 1 1 111 14677777744444
Q ss_pred ccCCCEEEEcCCCChhHHHHHHHHH
Q 010627 199 PNQIDMIALSFVRKGSDLVGVRKLL 223 (505)
Q Consensus 199 ~~g~d~V~~sfV~sa~dv~~v~~~l 223 (505)
+.|.+.-+++++++++-++.+.+++
T Consensus 245 ~~~~~~~iiaKIE~~eav~nldeIl 269 (511)
T 3gg8_A 245 PRGRHIRIIPKIENVEGLVNFDEIL 269 (511)
T ss_dssp GGGTTCEEEEEECSHHHHHTHHHHH
T ss_pred hcCCCCeEEEEECCHHHHHhHHHHH
Confidence 5677888899999999999888776
No 332
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=36.80 E-value=3.1 Score=43.09 Aligned_cols=121 Identities=17% Similarity=0.130 Sum_probs=0.0
Q ss_pred CCCCCCCCcccccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCCH----HHHHHHHHHHHHHHHHcCCeeEE
Q 010627 1 MDANCGVSTAIEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSH----EYHQETLNNLRTAMVNTGILCAV 76 (505)
Q Consensus 1 ~~~~~~~~~~~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~----~~~~~~i~~ir~~~~~~~~~v~i 76 (505)
.|.|+|++..-.=.-.|+|-+++ | .|+.+++.|..| +=+||-.. +....+---.+..++.+++||..
T Consensus 24 vD~NVP~~~~g~Itdd~RI~aal-p------TI~~ll~~GakV--il~SHlGRP~g~~~~~SL~pva~~L~~lLg~~V~f 94 (403)
T 3q3v_A 24 CDFNVPQDDFLNITDDRRIRSAI-P------TIRYCLDNGCSV--ILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVM 94 (403)
T ss_dssp CCCCCCBCTTCCBSCCHHHHHHH-H------HHHHHHHTTCEE--EEECCCSCCSSCCGGGCSHHHHHHHHHHHTSCCEE
T ss_pred eccCCCcCCCCcccChHHHHHHH-H------HHHHHHHCCCEE--EEEecCCCCCCCCcccCHHHHHHHHHHHHCCCeEe
Q ss_pred EEecCC-CeeEEeecCCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCC
Q 010627 77 MLDTKG-PEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDG 141 (505)
Q Consensus 77 ~~Dl~G-pkiR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG 141 (505)
.-|.-| |+.+- +.+ |+.|+.+.|-.-.-..+.+. |.+.|.+.+..--.||++|.
T Consensus 95 ~~d~~G~~~~~~--v~~-----l~~G~VlLLEN~RF~~~E~~----nd~~fa~~LA~l~DvyVNDA 149 (403)
T 3q3v_A 95 AKDVIGEDAKTK--AMN-----LKAGEILLLENLRFEKGETK----NDENLAKELASMVQVYINDA 149 (403)
T ss_dssp CSSSSSHHHHHH--HHH-----CCTTCEEECSCGGGSTTGGG----TCHHHHHHHHHTCSEEEECC
T ss_pred cCCCCCcHHHHH--Hhc-----CCCCcEEEEeecccccchhh----cHHHHHHHHHhhCCEEEECc
No 333
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=36.44 E-value=68 Score=32.48 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=43.8
Q ss_pred HHHHhcccccCCCEEEEcC------------CCChhHHHHHHHH----HhccCC-CceEEE--EecCHHHHhcHHHHHhc
Q 010627 191 EDILKWGIPNQIDMIALSF------------VRKGSDLVGVRKL----LGGHAK-NILLMS--KVENQEGVANFDDILAN 251 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sf------------V~sa~dv~~v~~~----l~~~~~-~~~Iia--kIEt~~av~nldeI~~~ 251 (505)
++. +.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. ++.||+ -|-+..-+ ...+..=
T Consensus 223 e~a-~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv--~kalalG 299 (393)
T 2qr6_A 223 TTA-LHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDV--VKAIACG 299 (393)
T ss_dssp HHH-HHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHH--HHHHHHT
T ss_pred HHH-HHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHH--HHHHHcC
Confidence 355 666789999999975 3334445555554 222232 378887 35554332 2333334
Q ss_pred CCeeEEecCcccCcC
Q 010627 252 SDAFMVARGDLGMEI 266 (505)
Q Consensus 252 sDgImIaRgDLg~e~ 266 (505)
+|++++||.=|+..-
T Consensus 300 A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 300 ADAVVLGSPLARAEE 314 (393)
T ss_dssp CSEEEECGGGGGSTT
T ss_pred CCEEEECHHHHcCCC
Confidence 899999998766543
No 334
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=36.44 E-value=49 Score=28.64 Aligned_cols=41 Identities=17% Similarity=0.404 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG---------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv 161 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTI 161 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEE
Confidence 45566778888999999998862 567778888775 999999
No 335
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=36.37 E-value=2.1e+02 Score=28.07 Aligned_cols=144 Identities=15% Similarity=0.134 Sum_probs=77.2
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++. ..||++.|- ..+-+|..+.+. |-..|+|++|+..
T Consensus 57 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg---------~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 57 INGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGAG---------SNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp CSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 6999874 3222 234445544555555555432 478887542 344556655544 6678999999964
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhccc-CchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEc-CC---chHH
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAESTL-DYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLT-RG---GSTA 403 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE~~~-~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T-~s---G~ta 403 (505)
=--...-+-+.++....|+.++.--+ -|. ++... . ...+ .+. ..++|.+.. . |+-+= .+ .+..
T Consensus 126 P~y~~~~~~~l~~~f~~va~a~~lPiilYn--~P~~t-g--~~l~-~~~----~~~La~~~p-n-IvgiKdssgd~~~~~ 193 (315)
T 3si9_A 126 PYYNRPNQRGLYTHFSSIAKAISIPIIIYN--IPSRS-V--IDMA-VET----MRDLCRDFK-N-IIGVKDATGKIERAS 193 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEE--CHHHH-S--CCCC-HHH----HHHHHHHCT-T-EEEEEECSCCTHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEe--Cchhh-C--CCCC-HHH----HHHHHhhCC-C-EEEEEeCCCCHHHHH
Confidence 33223335678888888888775322 222 22111 1 1222 222 344554332 2 22221 12 3455
Q ss_pred HHHHhhCCCCcEEEE
Q 010627 404 KLVAKYRPGMPILSV 418 (505)
Q Consensus 404 ~~ls~~RP~~pIiav 418 (505)
+++...+|...|+..
T Consensus 194 ~l~~~~~~~f~v~~G 208 (315)
T 3si9_A 194 EQREKCGKDFVQLSG 208 (315)
T ss_dssp HHHHHHCSSSEEEES
T ss_pred HHHHHcCCCeEEEec
Confidence 667777788777766
No 336
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=36.29 E-value=62 Score=31.48 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=57.8
Q ss_pred HHHHHhcccccCCCEEEEc------CCCChhHHHHHHH-HHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEe
Q 010627 190 KEDILKWGIPNQIDMIALS------FVRKGSDLVGVRK-LLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVA 258 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~s------fV~sa~dv~~v~~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIa 258 (505)
.+.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.+++||+-+= +.++++......+. +|++|+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3333478889999999863 3344444444433 3444456788999884 46677666665554 6999986
Q ss_pred cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 259 RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 259 RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
+-...- .+.+.+...-+.| |.+.+.|+++
T Consensus 104 ~P~y~~-~s~~~l~~~f~~i---a~a~~lPiil 132 (291)
T 3a5f_A 104 TPYYNK-TTQKGLVKHFKAV---SDAVSTPIII 132 (291)
T ss_dssp CCCSSC-CCHHHHHHHC-CT---GGGCCSCEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhcCCCEEE
Confidence 544321 2333433333333 4455788876
No 337
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=36.20 E-value=1.7e+02 Score=29.18 Aligned_cols=130 Identities=17% Similarity=0.104 Sum_probs=66.7
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEc---------C----CCChh------------HHHHHHHHHh-ccCCCc
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALS---------F----VRKGS------------DLVGVRKLLG-GHAKNI 230 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~s---------f----V~sa~------------dv~~v~~~l~-~~~~~~ 230 (505)
.||..|.+.+. +.+.+.|+|+|=+. | .+... -+.++.+.++ ..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 57888777663 46778999999876 2 21111 1222323332 235677
Q ss_pred eEEEEecC----------HHHHhcHHHHHhcCCeeEEecCcccCc-CCchhHHHHHHHHHHHHH-HcCCCeEEehhhhHh
Q 010627 231 LLMSKVEN----------QEGVANFDDILANSDAFMVARGDLGME-IPIEKIFLAQKVMIYKCN-IQGKPVVTATQMLES 298 (505)
Q Consensus 231 ~IiakIEt----------~~av~nldeI~~~sDgImIaRgDLg~e-~~~~~v~~~qk~Ii~~~~-~~gkpvi~ATqmLeS 298 (505)
.|..||-- .++++-+..+-+..|.|-+.-|...-. .+.. +..+-..++..+ ..+.|++....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi--- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLY--PGYQVKYAETIKKRCNIKTSAVGLI--- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCEEEEESSC---
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeeccc--CceeehHHHHHHHhcCcccceeeee---
Confidence 88888843 122222233322368888854433211 1100 011222222222 347998875432
Q ss_pred hhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 299 MIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 299 M~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
-|.. +...++..| +|+|++.
T Consensus 287 ------~t~e---~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 ------TTQE---LAEEILSNERADLVALG 307 (343)
T ss_dssp ------CCHH---HHHHHHHTTSCSEEEES
T ss_pred ------eHHH---HHHHHHhchhhHHHHHH
Confidence 2222 335567778 9999994
No 338
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=36.17 E-value=55 Score=33.15 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=41.0
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 16 KTKIVCTLGPASRSVP----MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~----~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
+....+|+|....+++ ..+++.++|.+.+.++..|++.+.-.+.++.+|++ .|.-+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VPAGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SCTTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hCCCCeEEEEC
Confidence 3455666653222443 34567889999999999998888777788888765 33234455554
No 339
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=36.12 E-value=1.2e+02 Score=28.64 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=27.3
Q ss_pred HHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010627 384 TANSARATLILVLTRG---------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 384 ~a~~~~a~~Ivv~T~s---------G~ta~~ls~~RP~~pIiav 418 (505)
.+.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 160 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIF 160 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEE
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEe
Confidence 7788899998888763 556777777776 999998
No 340
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=36.07 E-value=67 Score=32.47 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=34.2
Q ss_pred HHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 33 IEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 33 i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
.+++.++|.+.+.++..|++.++-.+.++.+|++. +.-+.|++|.
T Consensus 173 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 217 (392)
T 1tzz_A 173 MRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---GKDAQLAVDA 217 (392)
T ss_dssp HHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---TTTCEEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---CCCCeEEEEC
Confidence 46678899999999999999888888888888763 3233455555
No 341
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=36.05 E-value=1.3e+02 Score=29.18 Aligned_cols=88 Identities=8% Similarity=0.025 Sum_probs=56.6
Q ss_pred HHHHHhccCC-CceEEEEecCHHHHhcHHHHHh-cCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhh
Q 010627 219 VRKLLGGHAK-NILLMSKVENQEGVANFDDILA-NSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQML 296 (505)
Q Consensus 219 v~~~l~~~~~-~~~IiakIEt~~av~nldeI~~-~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmL 296 (505)
+|+.|.. |. .+.+++.+.+++.++.+ .. -.|.+++..-|-. . +...++. .+.++...|+|+++=+.
T Consensus 30 ~k~~l~~-G~~~~gl~~~~~~p~~~e~a---~~~GaD~v~lDlEh~~----~-~~~~~~~-~l~a~~~~~~~~~VRv~-- 97 (287)
T 2v5j_A 30 FKAALKA-GRPQIGLWLGLSSSYSAELL---AGAGFDWLLIDGEHAP----N-NVQTVLT-QLQAIAPYPSQPVVRPS-- 97 (287)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHHH---HTSCCSEEEEESSSSS----C-CHHHHHH-HHHHHTTSSSEEEEECS--
T ss_pred HHHHHHC-CCcEEEEEEECCCHHHHHHH---HhCCCCEEEEeCCCcc----c-hHHHHHH-HHHHHHhcCCCEEEEEC--
Confidence 6666654 44 57899999998776432 22 2699999877752 2 2222332 34455667888887432
Q ss_pred HhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 297 ESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 297 eSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
.+.. .|+..++..|+|+||+.-
T Consensus 98 -------~~d~---~di~~~ld~ga~~ImlP~ 119 (287)
T 2v5j_A 98 -------WNDP---VQIKQLLDVGTQTLLVPM 119 (287)
T ss_dssp -------SSCH---HHHHHHHHTTCCEEEESC
T ss_pred -------CCCH---HHHHHHHhCCCCEEEeCC
Confidence 2222 388888889999999963
No 342
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=36.04 E-value=1.8e+02 Score=28.19 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=56.6
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+.+++.++. ..||+..+- ..+-+|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 28 EWQIEEGSFGLVPC-GTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGAG---------SNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHTTCSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CccHHHHHHHHHHHHHcCC
Confidence 334443 6999874 2222 234455555555555555432 478886543 334456665555 666799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+.+.++....|+.++.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999996543323335677888888887765
No 343
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=35.92 E-value=2.1 Score=44.17 Aligned_cols=121 Identities=19% Similarity=0.185 Sum_probs=0.0
Q ss_pred CCCCCCCCcccccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCC-----CCHHHHHHHHHHHHHHHHHcCCeeE
Q 010627 1 MDANCGVSTAIEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSH-----GSHEYHQETLNNLRTAMVNTGILCA 75 (505)
Q Consensus 1 ~~~~~~~~~~~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~sh-----g~~~~~~~~i~~ir~~~~~~~~~v~ 75 (505)
.|.|+|++.. .-.-.|+|-+++ | .|+.+++.|..|.=+ || |..+....+---.+..++.+++||.
T Consensus 20 vD~NVPl~~g-~Itdd~RI~aal-p------TI~~ll~~gakvil~--SHlGRPkg~~~~~~SL~pva~~L~~lLg~~V~ 89 (394)
T 1php_A 20 VDFNVPMEQG-AITDDTRIRAAL-P------TIRYLIEHGAKVILA--SHLGRPKGKVVEELRLDAVAKRLGELLERPVA 89 (394)
T ss_dssp CCCCCCEETT-EESCCHHHHHHH-H------HHHHHHHTTCEEEEE--CCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCE
T ss_pred ecCCCcccCC-ccCChHHHHHHH-H------HHHHHHHCCCEEEEE--ecCCCCCCCCCCccCHHHHHHHHHHHHCCCce
Q ss_pred EEEecCCCeeEEeecCCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCC
Q 010627 76 VMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDG 141 (505)
Q Consensus 76 i~~Dl~GpkiR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG 141 (505)
..-|.-||+.+ -.+.. |+.|+.+.|-.-.-..+.+. |.++|.+.+..--.||++|.
T Consensus 90 f~~d~~G~~~~-~~v~~-----l~~G~VlLLEN~RF~~~E~~----nd~~fa~~LA~l~DvyVNDA 145 (394)
T 1php_A 90 KTNEAVGDEVK-AAVDR-----LNEGDVLLLENVRFYPGEEK----NDPELAKAFAELADLYVNDA 145 (394)
T ss_dssp ECSCSSSHHHH-HHHHT-----CCTTCEEECCCGGGSHHHHH----TCHHHHHHHHTTCSEEEECC
T ss_pred ECCCcCCHHHH-HHHhc-----CCCCeEEEEcccCCCcchhh----CCHHHHHHHHhhCCEEEecc
No 344
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=35.65 E-value=1.5e+02 Score=28.70 Aligned_cols=95 Identities=15% Similarity=0.096 Sum_probs=55.5
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++. ..||+..|- ..+-.|..+.+. |-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGTG---------ANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CccHHHHHHHHHHHHhcCC
Confidence 333443 7999984 3222 234455555555555555432 478886542 345566666555 556699
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--...-+-+.++....|+.++.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997433222335667778777776554
No 345
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=35.54 E-value=2.2e+02 Score=28.26 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=66.6
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEcCC-------------CChh---------H---HHHHHHHHhccCCCce
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALSFV-------------RKGS---------D---LVGVRKLLGGHAKNIL 231 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~sfV-------------~sa~---------d---v~~v~~~l~~~~~~~~ 231 (505)
.||..|.+.+. +.+.+.|+|+|=+..- +... . +.++.+.+++.- +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 57888777664 4677899999877543 2211 1 222222232222 556
Q ss_pred EEEEecCHH------HHhcHHHHHh----c-CCeeEEecCcccCc-CCchhHHHHHHHHHHHH-HHcCCCeEEehhhhHh
Q 010627 232 LMSKVENQE------GVANFDDILA----N-SDAFMVARGDLGME-IPIEKIFLAQKVMIYKC-NIQGKPVVTATQMLES 298 (505)
Q Consensus 232 IiakIEt~~------av~nldeI~~----~-sDgImIaRgDLg~e-~~~~~v~~~qk~Ii~~~-~~~gkpvi~ATqmLeS 298 (505)
|..||---+ .++..-++++ . .|.|-+.-|.+.-. .+.. +..+...++.. +..+.|++....+
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~GgI--- 286 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGLI--- 286 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESSC---
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCCC---
Confidence 788884211 1233333333 2 58888854433211 1100 01122222222 3358999875542
Q ss_pred hhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 299 MIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 299 M~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
-|. .+...++..| +|+|++.
T Consensus 287 ------~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 287 ------TSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCH---HHHHHHHHCCCeeEEEec
Confidence 222 2345677788 9999995
No 346
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=35.42 E-value=1.7e+02 Score=29.29 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHcCCCeEEehhhhHhhhc---C-CC---------CChHHHHH-HHHHHHcCCceeeecccCCC
Q 010627 273 LAQKVMIYKCNIQGKPVVTATQMLESMIK---S-PR---------PTRAEATD-VANAVLDGTDCVMLSGETAA 332 (505)
Q Consensus 273 ~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~---~-~~---------ptraEv~D-v~nav~~G~D~imLs~Eta~ 332 (505)
..-..+.++|.++|.|..+.|+.-.|+.. . |. .++....+ +..+...|++++.++-++..
T Consensus 88 ~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~ 161 (370)
T 1gox_A 88 EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (370)
T ss_dssp THHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred hHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 44467889999999999987655333322 1 21 12322222 33356789999999988754
No 347
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=35.40 E-value=48 Score=32.04 Aligned_cols=53 Identities=23% Similarity=0.276 Sum_probs=34.9
Q ss_pred CHHHHHHHHHhCCcEEEEecCCC---------CH-HHHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSHG---------SH-EYHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~shg---------~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
+.+.++.|-+.|+|++||-++.. .. +...+.++.+=+...+.| +.+++|+-..
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g--i~vild~h~~ 95 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--AYAVVDPHNY 95 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--CEEEEEECCT
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEecccc
Confidence 48899999999999999987531 11 233334444444445566 5588888643
No 348
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=35.37 E-value=64 Score=26.55 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~~-~pVlvv 136 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIK-IDMLVV 136 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcCC-CCEEEe
Confidence 46666778889999999998772 356677776665 999998
No 349
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=35.21 E-value=1e+02 Score=31.24 Aligned_cols=31 Identities=26% Similarity=0.336 Sum_probs=23.9
Q ss_pred CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 286 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 286 gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
..|+|...-+- --.|+..++..|+|++++..
T Consensus 272 ~ipVia~GGI~------------~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 272 KIEVYMDGGVR------------TGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SSEEEEESSCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 57888765533 24789999999999999953
No 350
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=34.78 E-value=1e+02 Score=30.75 Aligned_cols=66 Identities=9% Similarity=-0.038 Sum_probs=49.8
Q ss_pred HHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 215 DLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 215 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-++.+.+.|.+.|..+.+-+.-+.... +.+++++-.|.|+.+-.+ ...+..+-+.|+++++|.+.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 356667778888888888877665543 567888888998877432 356778999999999999865
No 351
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=34.76 E-value=33 Score=34.90 Aligned_cols=46 Identities=24% Similarity=0.369 Sum_probs=36.7
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 21 CTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 21 ~TiGp~~~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+.+|-.....+.++.++++|++++=++.+||..+...+.|+.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 4455444457889999999999999999999887777788888874
No 352
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=34.76 E-value=3.2e+02 Score=28.92 Aligned_cols=150 Identities=15% Similarity=0.184 Sum_probs=86.0
Q ss_pred cEEEecchhhhcccCCCCEEEEe-CCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCcccCCc----------------c
Q 010627 117 NMICMSYKKLAVDVQPGSVILCS-DGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGV----------------I 179 (505)
Q Consensus 117 ~~i~v~~~~~~~~v~~Gd~I~id-DG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgvnlp~~----------------~ 179 (505)
+.|++|.-.+--. .+-++ ++.+..+|. .++.+. .+-|.=-++..+++|.. +
T Consensus 140 ~~ilidDG~i~l~-----V~~~~~~~~i~~~v~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD 207 (499)
T 3hqn_D 140 NYIYIDDGILILQ-----VQSHEDEQTLECTVT----NSHTIS---DRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVD 207 (499)
T ss_dssp CEEEETTTTEEEE-----EEEEEETTEEEEEEC----SCEEEE---TTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCS
T ss_pred CEEEEeCCEEEEE-----EEEEcCCCeEEEEEE----eCcEee---CCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCC
Confidence 4577765332211 12344 446666665 233332 34466677888888852 1
Q ss_pred -ccCCCC-ChhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHh---------------------------------
Q 010627 180 -VDLPTL-TEKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLG--------------------------------- 224 (505)
Q Consensus 180 -~~l~~l-te~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~--------------------------------- 224 (505)
+-+|.. +..|...+.++.-+.|-+.-+++++++++-++.+.+++.
T Consensus 208 ~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~ 287 (499)
T 3hqn_D 208 MIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCN 287 (499)
T ss_dssp EEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHH
Confidence 112222 567777774444446677778899999999999888763
Q ss_pred ccCCCceEEE------EecCH-----HHHhcHHHHHhcCCeeEE----ecCcccCcCCchhHHHHHHHHHHHHHH
Q 010627 225 GHAKNILLMS------KVENQ-----EGVANFDDILANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIYKCNI 284 (505)
Q Consensus 225 ~~~~~~~Iia------kIEt~-----~av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~~~~ 284 (505)
.+| .+.|+| +|+++ |+-+=...|+.-+|++|+ +.|+. |.+- -..+.+|+..+.+
T Consensus 288 ~ag-kpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~y----Pvea-V~~m~~I~~~aE~ 356 (499)
T 3hqn_D 288 VAG-KPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKY----PNEV-VQYMARICLEAQS 356 (499)
T ss_dssp HHT-CCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHHH-HHHHHHHHHHHHH
T ss_pred HcC-CCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCC----HHHH-HHHHHHHHHHHHh
Confidence 122 233443 56553 333446677777899999 55543 3333 3445566655544
No 353
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=34.75 E-value=1.9e+02 Score=26.62 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=57.9
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe---c----CHHHHhcHHHHHhcCCeeEEecCc
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV---E----NQEGVANFDDILANSDAFMVARGD 261 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---E----t~~av~nldeI~~~sDgImIaRgD 261 (505)
|.+++.+.+.+.|++.++++-+ ++++.+.+.++.++.. ++....-+ + +.+.++.+++.++..-. +|=|.
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~--~~iGE 95 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS-SCWSTAGVHPHDSSQWQAATEEAIIELAAQPEV--VAIGE 95 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST-TEEEEECCCGGGGGGCCHHHHHHHHHHHTSTTE--EEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC-CEEEEEEECCcccccCCHHHHHHHHHHhcCCCe--EEEEE
Confidence 4555547778899998776543 5778887777665532 32211111 1 12344555555542222 34466
Q ss_pred ccCcCCch-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010627 262 LGMEIPIE-KIFLAQ----KVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 262 Lg~e~~~~-~v~~~q----k~Ii~~~~~~gkpvi~AT 293 (505)
.|.+.... .-...| +..++.|.+.|+|+++-|
T Consensus 96 ~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~ 132 (264)
T 1xwy_A 96 CGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC 132 (264)
T ss_dssp EEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 66665321 112333 467889999999999854
No 354
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=34.70 E-value=89 Score=28.58 Aligned_cols=50 Identities=10% Similarity=0.063 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCCCCH---HHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHH
Q 010627 15 PKTKIVCTLGPASRSV---PMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRT 65 (505)
Q Consensus 15 r~tkIi~TiGp~~~~~---~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~ 65 (505)
+..|+. -|-|+..+. +.+++++++|++.+-+.--..+.++..++++.+++
T Consensus 15 ~~~~l~-~It~~~~~~~~l~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~ 67 (221)
T 1yad_A 15 SHMELH-AITDDSKPVEELARIIITIQNEVDFIHIRERSKSAADILKLLDLIFE 67 (221)
T ss_dssp --CEEE-EECCSCSCHHHHHHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cCccEE-EEECCCcCcchHHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHH
Confidence 444554 455654433 44677889999998877666778888888888875
No 355
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=34.68 E-value=28 Score=34.27 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=46.8
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHH--HhcHHHHHhc-CCeeEEec
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEG--VANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-sDgImIaR 259 (505)
+.+.+ +-+++.|+|+|.+.. -++++++++.+.+...+.++++.| --| .+|+.++++. +|+|-+|.
T Consensus 202 tleea-~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDA-LRAVEAGADIVMLDN-LSPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHH-HHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 35566 667889999999998 588999999888865434444433 222 3677777776 79999976
No 356
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=34.50 E-value=1.5e+02 Score=27.73 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=59.5
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe---cC----HHHHhcHHHHHhcCCeeEEecC
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV---EN----QEGVANFDDILANSDAFMVARG 260 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---Et----~~av~nldeI~~~sDgImIaRg 260 (505)
.|.+++.+.+.+.|++.++++-. ++++...+.++.++.. ++....-+ +. .++++.+++.+. +.-.++-|
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~--~~~~~~iG 102 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLEKFAK--DEKVVAIG 102 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHHHHTT--STTEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEeeccccccccCHHHHHHHHHHhc--cCCEEEEE
Confidence 46666657788899998776543 6778888777765543 33222222 10 123444444443 22344556
Q ss_pred cccCcCCch-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010627 261 DLGMEIPIE-KIFLAQ----KVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 261 DLg~e~~~~-~v~~~q----k~Ii~~~~~~gkpvi~AT 293 (505)
..|++.... .-...| ...++.|.+.|+|+++-+
T Consensus 103 e~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~ 140 (268)
T 1j6o_A 103 ETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHI 140 (268)
T ss_dssp EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 666665431 112334 577889999999999854
No 357
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=34.48 E-value=1.8e+02 Score=28.54 Aligned_cols=41 Identities=22% Similarity=0.210 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhcCC----cEEEEEcCCchHHHHHHhh--CCCCcEEEE
Q 010627 377 LASSAVRTANSARA----TLILVLTRGGSTAKLVAKY--RPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a----~~Ivv~T~sG~ta~~ls~~--RP~~pIiav 418 (505)
-+...+..|.+.+. +.||.. .+|++++.+|.+ +-..|.+.+
T Consensus 56 ~a~~~l~~a~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv 102 (325)
T 3dwg_A 56 PAVRMIEQAEADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICV 102 (325)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEE
Confidence 34444444444443 444443 356665544332 224555544
No 358
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=34.31 E-value=68 Score=32.20 Aligned_cols=49 Identities=6% Similarity=0.087 Sum_probs=36.1
Q ss_pred CeEEEEecCCCCCCHHH----HHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 16 KTKIVCTLGPASRSVPM----IEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~~~----i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
+...-+|+|- .+++. .+++.++|.+.+.+++.|++.++-.+.++.+|++
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a 186 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG 186 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH
Confidence 4555677764 34443 4567889999999999998887777788888764
No 359
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=34.25 E-value=80 Score=29.83 Aligned_cols=66 Identities=14% Similarity=0.195 Sum_probs=45.1
Q ss_pred HHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 216 LVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 216 v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
++.+++.+.+.+..+.+.+.-+... -+|++++++-.|.|+.+-++. ..+..+.+.|++.|+|++.+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDNV----------AVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSSH----------HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEe
Confidence 4555566666666666655433322 257788888889998874332 36678889999999999875
No 360
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=34.22 E-value=1.5e+02 Score=28.91 Aligned_cols=51 Identities=22% Similarity=0.331 Sum_probs=38.9
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHH
Q 010627 275 QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQ 345 (505)
Q Consensus 275 qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~ 345 (505)
-+..++.|+++|++|.+=| .+ +-.++..++..|+|+|+- .||-.+.+.+.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WT--Vn-----------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWT--VN-----------EPEDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBC--CC-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEc--CC-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 4688999999999999876 11 224566677789999986 789888777643
No 361
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=34.22 E-value=1.9e+02 Score=28.13 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=55.2
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++. ..||+..|- ..+-+|..+.+. |-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGvg---------~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 40 RYQLENGVNALIVL-GTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGAG---------TNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcCC---------CccHHHHHHHHHHHHhcCC
Confidence 334443 6999984 3222 234445545555555555432 478886542 344566666555 566799
Q ss_pred ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 322 DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 322 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|++|+..=--..--+.+.++....|+.++.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 109 NGVLVVTPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999996433222235667778878776554
No 362
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=34.09 E-value=68 Score=30.06 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=58.7
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe------c-------CHHHHhcHHHHHhcCCe
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV------E-------NQEGVANFDDILANSDA 254 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI------E-------t~~av~nldeI~~~sDg 254 (505)
.|.+.+.+.+.+.|++.++.+- .+.++...+.++..+.+..+....-| . +.+.++.+.+.+.....
T Consensus 20 ~~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (272)
T 2y1h_A 20 RDLDDVLEKAKKANVVALVAVA-EHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKD 98 (272)
T ss_dssp TTHHHHHHHHHHTTEEEEEECC-SSGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGG
T ss_pred cCHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCC
Confidence 3555554777889999877763 34677777777665443222211111 1 22344445444432211
Q ss_pred eEEecCcccCcCC--c--h-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010627 255 FMVARGDLGMEIP--I--E-KIFLAQ----KVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 255 ImIaRgDLg~e~~--~--~-~v~~~q----k~Ii~~~~~~gkpvi~AT 293 (505)
-.+|=|..|.+.. . . .....| +..++.|++.|+|+++-|
T Consensus 99 ~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~ 146 (272)
T 2y1h_A 99 RLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHS 146 (272)
T ss_dssp GCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 2234467777762 1 1 123444 467888999999999855
No 363
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=33.96 E-value=4.5e+02 Score=27.79 Aligned_cols=148 Identities=18% Similarity=0.217 Sum_probs=83.7
Q ss_pred ceEEEEecCHHHHhcH------HHHHhcC-----CeeEEe-cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhH
Q 010627 230 ILLMSKVENQEGVANF------DDILANS-----DAFMVA-RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLE 297 (505)
Q Consensus 230 ~~IiakIEt~~av~nl------deI~~~s-----DgImIa-RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLe 297 (505)
..|+.|.|+.+-.-.+ .-|.... .+|+-+ -|+-| .-+..+|++.|.|+.+-
T Consensus 46 ~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~~~gVV~aSsGNhg------------~avA~aa~~lGi~~~Iv----- 108 (514)
T 1tdj_A 46 NVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHA------------QGVAFSSARLGVKALIV----- 108 (514)
T ss_dssp SEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSCSSSCEEEECSSSH------------HHHHHHHHHTTCCEEEE-----
T ss_pred CeEEEEECCCCCcccHHHHHHHHHHHHHHHhcCCCEEEEECCcHHH------------HHHHHHHHHcCCcEEEE-----
Confidence 4799999987654322 1232222 244432 23332 23567788999998763
Q ss_pred hhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCch--h
Q 010627 298 SMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPL--E 375 (505)
Q Consensus 298 SM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~--~ 375 (505)
.|...-...+...-..|++-++. + ...-++.+...+++++-...+-.. | .++. .
T Consensus 109 ------mP~~~p~~Kv~~~r~~GAeVvlv-~-----~~~dda~~~a~ela~e~g~~~v~p--f----------dnp~~ia 164 (514)
T 1tdj_A 109 ------MPTATADIKVDAVRGFGGEVLLH-G-----ANFDEAKAKAIELSQQQGFTWVPP--F----------DHPMVIA 164 (514)
T ss_dssp ------CCSSCCHHHHHHHHHHSCEEECC-C-----SSHHHHHHHHHHHHHHHCCEECCS--S----------CCHHHHH
T ss_pred ------ECCCCCHHHHHHHHHCCCEEEEE-C-----CCHHHHHHHHHHHHHhcCCEeeCC--C----------CCHHHHH
Confidence 12222234455566679986653 2 234567776666654422111100 0 1121 1
Q ss_pred hHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 376 SLASSAVRTANSAR-ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 376 ~ia~~av~~a~~~~-a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
.-..-+.++..+++ .++|++.+-+|.++--+++ .+|...||++
T Consensus 165 GqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgV 212 (514)
T 1tdj_A 165 GQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAV 212 (514)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEE
Confidence 11223556666664 7999999999998766555 4799999999
No 364
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=33.90 E-value=1.4e+02 Score=31.04 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=68.8
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.++.+- .|..+....+...-..|++-+....+. .| -++++...+++++-+..++
T Consensus 188 ~AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~~~ 252 (430)
T 4aec_A 188 IGLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDAYM 252 (430)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCcEE
Confidence 34566789999998653 133333345566667899988775321 12 3555555555443222111
Q ss_pred chhhHHhhhhCCCCCCCchhhHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPLESLASSAVRTANSA--RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
.. -|. .|..+..-....+.++.+++ ..++||+..-+|.|.--+++ ..|.+.|+++
T Consensus 253 i~-~~~-------np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigV 313 (430)
T 4aec_A 253 LQ-QFD-------NPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGV 313 (430)
T ss_dssp CC-TTT-------CTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ec-CCC-------CccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 00 010 01111111223345666666 46899999999998765554 4899999999
No 365
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=33.82 E-value=1.2e+02 Score=29.66 Aligned_cols=124 Identities=9% Similarity=-0.004 Sum_probs=67.3
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.|+.+- |-.+..| ...+...-..|++-+....+... .++.++.+...+++++-...+.
T Consensus 85 ~alA~~a~~~G~~~~iv------~p~~~~~----~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~~ 153 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILV------LRGKEEL----KGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPYV 153 (325)
T ss_dssp HHHHHHHHHTTCEEEEE------EESCCCS----CHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEEE
T ss_pred HHHHHHHHHhCCcEEEE------ECCCCCC----CchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceEE
Confidence 45667899999998653 1111101 22334455689997776543321 1123455554444322111111
Q ss_pred chhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPLESLASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
+..-+. .+ ...+.....+.++..+++ .+.||+..-+|.|+--+++ ..|...|+++
T Consensus 154 ~p~~~~-------n~-~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigV 214 (325)
T 1j0a_A 154 IPPGGA-------SP-IGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214 (325)
T ss_dssp ECGGGC-------SH-HHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EcCCCC-------CH-HHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEE
Confidence 110000 00 011222344567777764 7999999999999766554 5699999999
No 366
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=33.64 E-value=51 Score=31.55 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=36.1
Q ss_pred EEEEecC-CC-CCCHHHHHHHHHhCCcEEEEecCCCCHHH-HHHHHHHHHHHHHHcCCeeEEE
Q 010627 18 KIVCTLG-PA-SRSVPMIEKLLKAGMNVARFNFSHGSHEY-HQETLNNLRTAMVNTGILCAVM 77 (505)
Q Consensus 18 kIi~TiG-p~-~~~~~~i~~li~~G~~~~RlN~shg~~~~-~~~~i~~ir~~~~~~~~~v~i~ 77 (505)
+...|.| |. ..+.+.++.|.++|+|.+=+-.|.|...+ ..++++.+|+ ...|+-+|
T Consensus 9 ~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~----~~~Pivlm 67 (240)
T 1viz_A 9 WKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR----FLVPCVLE 67 (240)
T ss_dssp CCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT----SSSCEEEE
T ss_pred ceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC----cCCCEEEe
Confidence 3334444 54 35789999999999999999999986643 5556666654 56676554
No 367
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=33.57 E-value=1.8e+02 Score=28.35 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=53.4
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++ -..||++.+- ..+-+|..+.+. |-..|+|++|+..
T Consensus 50 v~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 50 CDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGAG---------TYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 6999984 2222 23444554455555555543 2468876542 345566666554 6667999999964
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHh
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
=--..--+.+.++....|+.++.
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33222235677888888877664
No 368
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.52 E-value=2.4e+02 Score=27.63 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=54.1
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.+ -..|||..|- ..+-+|..+.+. |-..|+|++|+..
T Consensus 43 v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGvg---------~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGVS---------APGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEecC---------CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 6999984 3222 2344455445555555555 3578876542 345566666554 6667999999953
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHh
Q 010627 329 ETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 329 Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
=- .-.-+-+.++....|+.++.
T Consensus 111 P~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 PP-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp CT-TCCSHHHHHHHHHHHHHHHC
T ss_pred CC-CCCCHHHHHHHHHHHHHhCC
Confidence 32 11234678888999998886
No 369
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=33.44 E-value=1.9e+02 Score=28.15 Aligned_cols=119 Identities=11% Similarity=0.142 Sum_probs=66.9
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++++- .|.......+...-..|++-+....+. .| .++.+...+++++-...+ |
T Consensus 81 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~-~ 144 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPNGY-M 144 (322)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEE-E
T ss_pred HHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCeE-e
Confidence 4567788999998762 122222334555666799977654321 12 356666665544431211 1
Q ss_pred hhhHHhhhhCCCCCCCchhhHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLESLASSAVRTANSA--RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
-.-|. . +..+..-....+.++..++ +.+.||+.+-+|.+.--+++ ..|...|+++
T Consensus 145 i~~~~-----n--~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 205 (322)
T 1z7w_A 145 LQQFE-----N--PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGV 205 (322)
T ss_dssp CCTTT-----C--THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCCC-----C--hhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEE
Confidence 00010 0 1011111122346666666 47999999999999766554 4799999999
No 370
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=33.43 E-value=2.7e+02 Score=27.41 Aligned_cols=127 Identities=8% Similarity=0.059 Sum_probs=0.0
Q ss_pred CChhcHHHHH-------hcccccCCCEEEEcCC-------------------------CChhHHHHHHHHHhccCCCceE
Q 010627 185 LTEKDKEDIL-------KWGIPNQIDMIALSFV-------------------------RKGSDLVGVRKLLGGHAKNILL 232 (505)
Q Consensus 185 lte~D~~di~-------~~al~~g~d~V~~sfV-------------------------~sa~dv~~v~~~l~~~~~~~~I 232 (505)
||..|.+.+. +.+.+.|+|+|=+... +.++-+.++.+.+++.- +..|
T Consensus 134 mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv 212 (338)
T 1z41_A 134 MSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPL 212 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcE
Q ss_pred EEEe----------cCHHHHhcHHHHHhc-CCeeEEecCccc---CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHh
Q 010627 233 MSKV----------ENQEGVANFDDILAN-SDAFMVARGDLG---MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLES 298 (505)
Q Consensus 233 iakI----------Et~~av~nldeI~~~-sDgImIaRgDLg---~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeS 298 (505)
..|| ...++++-+..+.+. .|+|-+.-|... ...+...-....+++-+.. +.|++....+-
T Consensus 213 ~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~Ggi~-- 287 (338)
T 1z41_A 213 FVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA---DMATGAVGMIT-- 287 (338)
T ss_dssp EEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---CCEEEECSSCC--
T ss_pred EEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC---CCCEEEECCCC--
Q ss_pred hhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 299 MIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 299 M~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
...+...++..| +|+|++.
T Consensus 288 ----------s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 288 ----------DGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ----------SHHHHHHHHHTTSCSEEEEC
T ss_pred ----------CHHHHHHHHHcCCceEEeec
No 371
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=33.38 E-value=1.3e+02 Score=26.84 Aligned_cols=47 Identities=15% Similarity=0.200 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEE
Q 010627 30 VPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVML 78 (505)
Q Consensus 30 ~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~ 78 (505)
.+.++.+.++|++.+-+.+...+.++..+.++.+++.....+.+ +++
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~--v~v 75 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDAL--FFV 75 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCE--EEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCe--EEE
Confidence 47889999999999988877778888888888888876665544 444
No 372
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=33.27 E-value=60 Score=31.51 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=39.9
Q ss_pred HHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 31 PMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 31 ~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
+..++|+++|+++.=+|+--...++..++..-++...+..+.| |.+|+.=|
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~p--isIDT~~~ 88 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLP--CCLDSTNP 88 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCC--EEEECSCH
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCe--EEEeCCCH
Confidence 3456799999999999997777778888888888877777766 66787633
No 373
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=32.89 E-value=2.9e+02 Score=27.64 Aligned_cols=114 Identities=17% Similarity=0.231 Sum_probs=66.0
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- .|..+....+...-..|++-+...+ .| .++.+...++..+.+..+ |
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~~-~ 168 (372)
T 1p5j_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGWV-Y 168 (372)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTEE-E
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCcE-E
Confidence 3566789999998762 1222223345555667998775432 23 456666666554422211 1
Q ss_pred hhhHHhhhhCCCCCCCc--hhhHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hC-CCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSP--LESLASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YR-PGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~R-P~~pIiav 418 (505)
-.-| .++ ...-...+.++..+++ .+.||+.+-+|.|+--+++ +. |...|+++
T Consensus 169 v~~~----------~n~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigV 229 (372)
T 1p5j_A 169 IPPF----------DDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAM 229 (372)
T ss_dssp CCSS----------CCHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred eCCC----------CCHHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEE
Confidence 1000 112 1222234466666664 6899999999999766554 23 88999999
No 374
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=32.88 E-value=1.3e+02 Score=31.27 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=64.8
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++++- .|.......+...-..|++-+....+...+ .+...++...++.++....+..
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 4667788999998763 122222234555666799977764332111 1222344444444332221110
Q ss_pred hhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLESLASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
.+ |. . +.++..-....+.++..+++ .++||+.+-+|.|+--+++ ..|.+.||++
T Consensus 243 ~q-~~-----n--~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigV 302 (435)
T 1jbq_A 243 DQ-YR-----N--ASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGV 302 (435)
T ss_dssp CT-TT-----C--THHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred Cc-cC-----C--cccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 00 00 0 10111111223456666663 6999999999999766554 4699999999
No 375
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=32.45 E-value=70 Score=30.83 Aligned_cols=53 Identities=11% Similarity=0.098 Sum_probs=34.7
Q ss_pred CCHHHHHHHHH-hCCcEEEEecCCC------CHHHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 28 RSVPMIEKLLK-AGMNVARFNFSHG------SHEYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 28 ~~~~~i~~li~-~G~~~~RlN~shg------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
.+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--l~vild~h~ 102 (306)
T 2cks_A 43 LTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG--LYVIVDWHI 102 (306)
T ss_dssp CSHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT--CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 35788988986 7999999987642 22224455555555556666 447788753
No 376
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=32.23 E-value=1.9e+02 Score=28.00 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=54.0
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCC
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 321 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~ 321 (505)
+-.++. .||+++. |--| ..+..++-..+.+..++.++ -..||+..|- ..+-.|..+.+. |-..|+
T Consensus 31 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~A~~~Ga 99 (294)
T 3b4u_A 31 RRCLSNGCDSVTLF-GTTGEGCSVGSRERQAILSSFIAAGI-APSRIVTGVL---------VDSIEDAADQSAEALNAGA 99 (294)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHTTC-CGGGEEEEEC---------CSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CccHHHHHHHHHHHHhcCC
Confidence 334443 6999984 2222 23444443333343333332 1367876542 334456655555 566799
Q ss_pred ceeeecccCCCC-CCHHHHHHHHHHHHHHH
Q 010627 322 DCVMLSGETAAG-AYPEVAVRTMAQICVEA 350 (505)
Q Consensus 322 D~imLs~Eta~G-~yP~~~V~~m~~i~~~a 350 (505)
|++|+..=--.. .-+-+.++....|+.++
T Consensus 100 davlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 100 RNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp SEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 999997433223 24577888999998887
No 377
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=32.20 E-value=2.1e+02 Score=27.98 Aligned_cols=98 Identities=10% Similarity=0.090 Sum_probs=61.0
Q ss_pred HHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehh
Q 010627 215 DLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQ 294 (505)
Q Consensus 215 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATq 294 (505)
.++.+++++.+. .+.+++-+-.+..++-+.+ ..|.+-||.+++.. .+ +++++.+.||||++.|-
T Consensus 77 gl~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~n------~~-----Ll~~~a~~~kPV~lk~G 140 (292)
T 1o60_A 77 GLKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLARQ------TD-----LVEAMAKTGAVINVKKP 140 (292)
T ss_dssp HHHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTTC------HH-----HHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECcccccC------HH-----HHHHHHcCCCcEEEeCC
Confidence 355556665544 4688887777766655544 58999999777642 22 55555688999999776
Q ss_pred hhHhhhcCCCCChHHHHHHHHHHH-cCCceeeecccCCCCCCH
Q 010627 295 MLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGETAAGAYP 336 (505)
Q Consensus 295 mLeSM~~~~~ptraEv~Dv~nav~-~G~D~imLs~Eta~G~yP 336 (505)
|- -|-.|+...+..+. .|.+-++|--=+..-.|+
T Consensus 141 ~~--------~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~ 175 (292)
T 1o60_A 141 QF--------LSPSQMGNIVEKIEECGNDKIILCDRGTNFGYD 175 (292)
T ss_dssp TT--------SCGGGHHHHHHHHHHTTCCCEEEEECCEECSTT
T ss_pred CC--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCC
Confidence 53 24457777676654 576545553322222554
No 378
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=32.17 E-value=3.4e+02 Score=25.82 Aligned_cols=119 Identities=14% Similarity=0.097 Sum_probs=65.7
Q ss_pred CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccC---CCCCCHHHHHHHHHHHHHHHhcccCchhhHHh
Q 010627 286 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGET---AAGAYPEVAVRTMAQICVEAESTLDYGDVFKR 362 (505)
Q Consensus 286 gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Et---a~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~ 362 (505)
|.++-++|-+ ..-..+.|+..-+..+..|+.+|+|.|=+---- -.|+|. ...+-+..+.+.+... .-+-.++.
T Consensus 76 ~s~v~v~tVi--gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~-~v~~eI~~v~~a~~~~-~lKVIlEt 151 (239)
T 3ngj_A 76 GTGVKVCTVI--GFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYD-DVEKDVKAVVDASGKA-LTKVIIEC 151 (239)
T ss_dssp TSSCEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHHTTS-EEEEECCG
T ss_pred CCCCeEEEEe--ccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHH-HHHHHHHHHHHHhcCC-ceEEEEec
Confidence 4444444432 222345677788899999999999998542111 125555 3666666666666531 11111111
Q ss_pred hhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchH-----HHHHHhh----CCCCcEEEE
Q 010627 363 VMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGST-----AKLVAKY----RPGMPILSV 418 (505)
Q Consensus 363 ~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t-----a~~ls~~----RP~~pIiav 418 (505)
. ..+ +.-...++++|.+.+|+ ++=|.||.+ ..-+.-+ .++++|.|-
T Consensus 152 ----~--~Lt--~eei~~a~~ia~~aGAD--fVKTSTGf~~ggAt~~dv~lmr~~vg~~v~VKas 206 (239)
T 3ngj_A 152 ----C--YLT--NEEKVEVCKRCVAAGAE--YVKTSTGFGTHGATPEDVKLMKDTVGDKALVKAA 206 (239)
T ss_dssp ----G--GSC--HHHHHHHHHHHHHHTCS--EEECCCSSSSCCCCHHHHHHHHHHHGGGSEEEEE
T ss_pred ----C--CCC--HHHHHHHHHHHHHHCcC--EEECCCCCCCCCCCHHHHHHHHHhhCCCceEEEe
Confidence 0 112 22355678899999999 556666643 2222222 356777665
No 379
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=32.15 E-value=1.2e+02 Score=31.49 Aligned_cols=87 Identities=11% Similarity=0.162 Sum_probs=48.3
Q ss_pred Cce-EEEEecCHHHHhcHHHHHhc-----CCeeEEecC-----cc---cCcCC-ch--hHHHHHHHHHHHHHH-c--CCC
Q 010627 229 NIL-LMSKVENQEGVANFDDILAN-----SDAFMVARG-----DL---GMEIP-IE--KIFLAQKVMIYKCNI-Q--GKP 288 (505)
Q Consensus 229 ~~~-IiakIEt~~av~nldeI~~~-----sDgImIaRg-----DL---g~e~~-~~--~v~~~qk~Ii~~~~~-~--gkp 288 (505)
+.+ |+.||=--...+++.+|++. +|||.+.-+ |+ +.+.+ +. .+....-+++...++ . ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 466 89998421112245555543 599988432 21 11111 11 111222344444444 4 789
Q ss_pred eEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 289 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 289 vi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
+|...-+- ...|+..++..|+|+|++.
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEES
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEc
Confidence 98765533 3467788889999999996
No 380
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=32.02 E-value=1.4e+02 Score=29.54 Aligned_cols=116 Identities=14% Similarity=0.163 Sum_probs=68.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- .|.......+...-..|++-+...++. .| .++.+...++.++....+.+
T Consensus 92 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 4667888999998763 122222334555666799987765421 12 35666655555432221011
Q ss_pred hhhHHhhhhCCCCCCCchh--h-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLE--S-LASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~--~-ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
..-| .++.. + ....+ ++..+++ .+.||+.+-+|.++--+++ ..|...|+++
T Consensus 157 ~~~~----------~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigV 216 (343)
T 2pqm_A 157 ANQF----------GNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAV 216 (343)
T ss_dssp CCTT----------TCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCC----------CChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEE
Confidence 0001 12211 1 23344 7777775 6899999999999776554 4799999999
No 381
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=32.01 E-value=88 Score=29.34 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=54.5
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHH-HHhcCCeeEEecCcccCcCCchhHHH
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDD-ILANSDAFMVARGDLGMEIPIEKIFL 273 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nlde-I~~~sDgImIaRgDLg~e~~~~~v~~ 273 (505)
+.+.+.|+|++.+|= ..++++..+|+.+. .-..+..=|= +++ .+..+ +..-+|.++|||+=...+=|.+....
T Consensus 129 ~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~---~~~~vtPGI~-~~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~ 202 (222)
T 4dbe_A 129 NVIREISPKGIVVGG-TKLDHITQYRRDFE---KMTIVSPGMG-SQG-GSYGDAVCAGADYEIIGRSIYNAGNPLTALRT 202 (222)
T ss_dssp HHHHHHCCSEEEECT-TCHHHHHHHHHHCT---TCEEEECCBS-TTS-BCTTHHHHHTCSEEEECHHHHTSSSHHHHHHH
T ss_pred HHHHHhCCCEEEECC-CCHHHHHHHHHhCC---CCEEEcCCcc-cCc-cCHHHHHHcCCCEEEECHHhcCCCCHHHHHHH
Confidence 778889999998764 34688999988774 2222333342 222 14544 44458999999999998888776666
Q ss_pred HHHHHHHHH
Q 010627 274 AQKVMIYKC 282 (505)
Q Consensus 274 ~qk~Ii~~~ 282 (505)
+++.+-+.-
T Consensus 203 i~~~i~~~~ 211 (222)
T 4dbe_A 203 INKIIEDKV 211 (222)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666554443
No 382
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=31.92 E-value=1.1e+02 Score=29.00 Aligned_cols=66 Identities=15% Similarity=0.198 Sum_probs=46.2
Q ss_pred HHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 216 LVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 216 v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
++.+++.+.+.+..+.+-+.-+... -+|++++++-.|.|+-+-.++ ..+..+-+.|+++++|.+.+
T Consensus 84 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 84 SQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDNM----------ATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSSH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCCH----------HHHHHHHHHHHHhCCCEEEE
Confidence 5556666766677777766544322 257888888889888764322 35678889999999998865
No 383
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=31.79 E-value=3.8e+02 Score=26.25 Aligned_cols=116 Identities=13% Similarity=0.218 Sum_probs=67.4
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.++.+- .|.......+...-..|++-+...+ . ..++.+...++.++- ..+
T Consensus 101 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~-~~~- 161 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVV-----------MPKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETE-GRI- 161 (342)
T ss_dssp HHHHHHHHHHTCCEEEE-----------ECTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHH-CCE-
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhc-CCE-
Confidence 35667888999998763 1222223345556667998765432 2 346666666665442 211
Q ss_pred chhhHHhhhhCCCCCCCchhhHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSPLESLASSAVRTANSA-RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
|-.-|. . + .........+.++..++ +.+.||+.+-+|.|+--+++ ..|...|+++
T Consensus 162 ~~~~~~-----n--~-~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 221 (342)
T 2gn0_A 162 FIPPYD-----D--P-KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGV 221 (342)
T ss_dssp ECCSSS-----S--H-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred EeCCCC-----C--H-HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEE
Confidence 110010 0 0 01112233356666666 47999999999999765554 4799999999
No 384
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=31.77 E-value=2.9e+02 Score=25.70 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG---------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.++++||+-++. |+++..+.+.-| ||++.+
T Consensus 77 ~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~-~PVlvv 126 (290)
T 3mt0_A 77 LHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAP-CPVLMT 126 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCC-CCEEEe
Confidence 35555667778899999988763 678888887665 999999
No 385
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=31.67 E-value=81 Score=31.91 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=37.9
Q ss_pred HHHHhcccccCCCEEEEcC---------CCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh----cCCeeEE
Q 010627 191 EDILKWGIPNQIDMIALSF---------VRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA----NSDAFMV 257 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sf---------V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~----~sDgImI 257 (505)
++. +.+.+.|+|+|.+|. .-+.+-+.++++.+ +.++.||+- -||.+-.++++ -+|+++|
T Consensus 241 e~a-~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v---~~~ipVia~----GGI~~g~D~~kalalGAd~V~i 312 (368)
T 2nli_A 241 EDA-DMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV---NKRVPIVFD----SGVRRGEHVAKALASGADVVAL 312 (368)
T ss_dssp HHH-HHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH---TTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHH-HHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh---CCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 455 667899999999964 22334445555544 335777773 24444444443 3799999
Q ss_pred ec
Q 010627 258 AR 259 (505)
Q Consensus 258 aR 259 (505)
||
T Consensus 313 Gr 314 (368)
T 2nli_A 313 GR 314 (368)
T ss_dssp CH
T ss_pred CH
Confidence 98
No 386
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=31.45 E-value=42 Score=27.57 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG--------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s--------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|. +++.||+-++. |+++..+.+.-| |||+.+
T Consensus 91 ~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 91 PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 4555566666 99999998874 778888888776 999987
No 387
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=31.41 E-value=1.1e+02 Score=23.79 Aligned_cols=71 Identities=15% Similarity=0.228 Sum_probs=37.5
Q ss_pred CcEEecCCCEEEEEecCCCCCCccE-EEecchhhhcccCCCCEEEEeCCeEEEEEEEEee-eCCeEEEEEeeC
Q 010627 94 KPIQLKQGQEITISTDYTIKGDENM-ICMSYKKLAVDVQPGSVILCSDGTISFTVLECNV-KAGLVKCRCENS 164 (505)
Q Consensus 94 ~~i~l~~G~~v~l~~~~~~~~~~~~-i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~-~~~~i~~~v~~g 164 (505)
..+.+.+|+.++|.+.-.-.-..+. .+-|...+...-..--.+.-+++.-.|.+..+.. +.+...|.+.|.
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 85 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEEC
Confidence 3588999999999875210111222 2334333321111011234456666777764332 345788999876
No 388
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=31.34 E-value=87 Score=29.12 Aligned_cols=36 Identities=6% Similarity=-0.124 Sum_probs=26.1
Q ss_pred HHHhcccccCCCEEEEcC---CCChhHHHHHHHHHhccCCC
Q 010627 192 DILKWGIPNQIDMIALSF---VRKGSDLVGVRKLLGGHAKN 229 (505)
Q Consensus 192 di~~~al~~g~d~V~~sf---V~sa~dv~~v~~~l~~~~~~ 229 (505)
.+ +.+.++|+|+|=+.. -.+. ++.++++.+.+.|-.
T Consensus 28 ~l-~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~ 66 (264)
T 1yx1_A 28 FL-PLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLE 66 (264)
T ss_dssp GH-HHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCE
T ss_pred HH-HHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCE
Confidence 44 778889999998752 2233 788999999887643
No 389
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=31.24 E-value=71 Score=32.67 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=48.7
Q ss_pred ChhHHHHHHHHHhccCCCceEEEE-ecCHHHHhcHHHHHhc-CCeeEEe-cCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 010627 212 KGSDLVGVRKLLGGHAKNILLMSK-VENQEGVANFDDILAN-SDAFMVA-RGDLGMEIPIEKIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 212 sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkp 288 (505)
+.++++++++.. +.+|+.| +-+ .+......+. +|+|.|. +|-=..+.+...+ ..-.++.++. .-..|
T Consensus 240 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~-~~l~~v~~av-~~~ip 309 (392)
T 2nzl_A 240 SWEDIKWLRRLT-----SLPIVAKGILR---GDDAREAVKHGLNGILVSNHGARQLDGVPATI-DVLPEIVEAV-EGKVE 309 (392)
T ss_dssp CHHHHHHHC--C-----CSCEEEEEECC---HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH-HHHHHHHHHH-TTSSE
T ss_pred HHHHHHHHHHhh-----CCCEEEEecCC---HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH-HHHHHHHHHc-CCCCE
Confidence 355566555433 4678887 323 2223333333 6999993 1110011122221 1112222221 12488
Q ss_pred eEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 289 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 289 vi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
||....+- --.|+..++..|+|++|+..
T Consensus 310 Via~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 310 VFLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EEEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 88765433 34788999999999999964
No 390
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=31.24 E-value=42 Score=32.46 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=51.4
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEE-EEecCHHHHh--------cHHHHHhc-CCeeEEecCcccC
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLM-SKVENQEGVA--------NFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Ii-akIEt~~av~--------nldeI~~~-sDgImIaRgDLg~ 264 (505)
+.+.+.|.|++.+| +.++..+|+.+ +.+..++ .=|- +++-+ +..+.++. +|.+++||+=++.
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~---g~~fl~VtPGIr-~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHL---GREFKLVTPGIR-PAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHH---CTTSEEEEECCC-CTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhc---CCCcEEEeCCcc-cCcCCccceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 55667899999766 88999999887 3444444 5553 23322 35555554 8999999988887
Q ss_pred cCCchhHHHHHHHH
Q 010627 265 EIPIEKIFLAQKVM 278 (505)
Q Consensus 265 e~~~~~v~~~qk~I 278 (505)
+=|.+....+++.|
T Consensus 241 ~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 241 AHPEVVLEEINSSL 254 (255)
T ss_dssp SCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhh
Confidence 77766655555543
No 391
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=31.23 E-value=90 Score=30.15 Aligned_cols=52 Identities=6% Similarity=0.180 Sum_probs=34.6
Q ss_pred CHHHHHHHHHhCCcEEEEecCC---------CCH-HHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSH---------GSH-EYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~sh---------g~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
+.+.++.|-+.|+|++|+-++. +.. ++..+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--LVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 5889999999999999997642 221 223344444444455667 457888865
No 392
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=30.91 E-value=86 Score=31.56 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=35.2
Q ss_pred HHHHHHHHHhCCcEEEEecCC--CCHHHHHHHHHHHHHHHHHcCCeeEEEEecC
Q 010627 30 VPMIEKLLKAGMNVARFNFSH--GSHEYHQETLNNLRTAMVNTGILCAVMLDTK 81 (505)
Q Consensus 30 ~~~i~~li~~G~~~~RlN~sh--g~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 81 (505)
.+..+++++.|.+.+.+++.| ++.++-.+.++.+|++ .+.-+.+++|..
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a---~g~~~~l~vDan 201 (374)
T 3sjn_A 151 VAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA---AGPEMEVQIDLA 201 (374)
T ss_dssp HHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred HHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 355677888999999999987 4677777788888875 343344555543
No 393
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=30.86 E-value=1e+02 Score=28.89 Aligned_cols=54 Identities=11% Similarity=0.109 Sum_probs=40.1
Q ss_pred HH-HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecccCCCCCCHHHHHHHHHHH
Q 010627 273 LA-QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGETAAGAYPEVAVRTMAQI 346 (505)
Q Consensus 273 ~~-qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~Eta~G~yP~~~V~~m~~i 346 (505)
.+ ....++.++++|++|.+=|- ++ -.++.. ++..|+|+|+- .||..+.+.+...
T Consensus 180 ~~~~~~~v~~~~~~G~~v~~wTv------n~-------~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~ 235 (248)
T 1zcc_A 180 QMRRPGIIEASRKAGLEIMVYYG------GD-------DMAVHREIATSDVDYINL-------DRPDLFAAVRSGM 235 (248)
T ss_dssp HHHSHHHHHHHHHHTCEEEEECC------CC-------CHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHCCCEEEEECC------CC-------HHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHh
Confidence 44 57899999999999998771 21 134556 77789999886 6898887776643
No 394
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=30.42 E-value=1.3e+02 Score=30.47 Aligned_cols=90 Identities=16% Similarity=0.183 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhccCCCceEEEE-e---cCHHHHhcHHHHHhcCCeeEE-ecCcccC---------------cCCchhHHH
Q 010627 214 SDLVGVRKLLGGHAKNILLMSK-V---ENQEGVANFDDILANSDAFMV-ARGDLGM---------------EIPIEKIFL 273 (505)
Q Consensus 214 ~dv~~v~~~l~~~~~~~~Iiak-I---Et~~av~nldeI~~~sDgImI-aRgDLg~---------------e~~~~~v~~ 273 (505)
+.++++++.. +++|++| + -+++....+.+. -+|+|.| ++|--.. +.+.+....
T Consensus 196 ~~I~~l~~~~-----~~PVivK~vg~g~s~e~A~~l~~a--Gad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~ 268 (365)
T 3sr7_A 196 KHLSDYAKKL-----QLPFILKEVGFGMDVKTIQTAIDL--GVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQV 268 (365)
T ss_dssp HHHHHHHHHC-----CSCEEEEECSSCCCHHHHHHHHHH--TCCEEECCCBC--------------CGGGTTCSCBHHHH
T ss_pred HHHHHHHHhh-----CCCEEEEECCCCCCHHHHHHHHHc--CCCEEEEeCCCCcccchhhccccccccccccccccHHHH
Q ss_pred HHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 274 AQKVMIYKCNIQ--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 274 ~qk~Ii~~~~~~--gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
+. .++.. ..|+|...-+- --.|++.++..|||++++.
T Consensus 269 L~-----~v~~~~~~ipvia~GGI~------------~g~Dv~KaLalGAdaV~ig 307 (365)
T 3sr7_A 269 LL-----NAQPLMDKVEILASGGIR------------HPLDIIKALVLGAKAVGLS 307 (365)
T ss_dssp HH-----HHGGGTTTSEEEECSSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred HH-----HHHHhcCCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
No 395
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=30.24 E-value=1.3e+02 Score=29.83 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=53.7
Q ss_pred hcccccCCCEEEEcCCCChh---------------HHHHHHHHH----hccCCCceEEEEecCHHHHhcHH----HHHhc
Q 010627 195 KWGIPNQIDMIALSFVRKGS---------------DLVGVRKLL----GGHAKNILLMSKVENQEGVANFD----DILAN 251 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~---------------dv~~v~~~l----~~~~~~~~IiakIEt~~av~nld----eI~~~ 251 (505)
+.+++.|+|+|.+=-|.+-. +...+-..| ++.+.++.|+.+ .|.+-++ ++...
T Consensus 129 ~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~~ 204 (309)
T 2aam_A 129 DRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAST 204 (309)
T ss_dssp HHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHHH
T ss_pred HHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHhh
Confidence 56788999999998886532 322222233 555666767665 2555556 77777
Q ss_pred CCeeEEecCcccC----cCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 252 SDAFMVARGDLGM----EIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 252 sDgImIaRgDLg~----e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
.||++.-- +-. +.+. +-......-+..++++||||+.
T Consensus 205 id~v~~Es--~~~~~~~~~~~-~e~~~~~~~l~~~~~~GkpV~~ 245 (309)
T 2aam_A 205 VSGWAVEN--LFYLKTIPLEE-NETKSRLEYLIRLNRKGKFILS 245 (309)
T ss_dssp CSEEEEES--SSEETTEECCH-HHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCEEEeee--EEecCCCCCCH-HHHHHHHHHHHHHHHcCCcEEE
Confidence 89887731 111 1121 2222234455677788999996
No 396
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=30.19 E-value=2.2e+02 Score=31.20 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCCcccCCccccCCCCChhcHHHHHhcccccCCCEEEEcCCCCh---------------hHHHHHHHHHhccCCCceEEE
Q 010627 170 RKNVNLPGVIVDLPTLTEKDKEDILKWGIPNQIDMIALSFVRKG---------------SDLVGVRKLLGGHAKNILLMS 234 (505)
Q Consensus 170 ~Kgvnlp~~~~~l~~lte~D~~di~~~al~~g~d~V~~sfV~sa---------------~dv~~v~~~l~~~~~~~~Iia 234 (505)
.+++++....- ++.-+.-| +||.++|.++|.+ ... .|++++.+|.+++| +.|+-
T Consensus 297 ~~~~~~~~g~n-----~~~~k~yI-DfAa~~G~~yvlv---D~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kg--V~i~l 365 (641)
T 3a24_A 297 LDGVDFVTGVN-----NPTYKAYI-DFASANGIEYVIL---DEGWAVNLQADLMQVVKEIDLKELVDYAASKN--VGIIL 365 (641)
T ss_dssp CCSCSSCCSSS-----HHHHHHHH-HHHHHTTCCEEEE---CTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTT--CEEEE
T ss_pred CCCcCCcCCCC-----HHHHHHHH-HHHHHcCCCEEEE---ecccccCCCCCccccCCcCCHHHHHHHHHhcC--CEEEE
Q ss_pred EecCHHHHhcHHHHHhc-----CCeeEE---ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 235 KVENQEGVANFDDILAN-----SDAFMV---ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 235 kIEt~~av~nldeI~~~-----sDgImI---aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
--|+..--+++++.++. .+||-+ .|+| +.+.....++++.|.+++.-|..
T Consensus 366 w~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~-------Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 366 WAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDD-------QEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp EEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCS-------HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCc-------HHHHHHHHHHHHHHHHcCCEEEc
No 397
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=30.01 E-value=2.9e+02 Score=26.75 Aligned_cols=106 Identities=11% Similarity=0.130 Sum_probs=62.9
Q ss_pred HHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhh
Q 010627 216 LVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQM 295 (505)
Q Consensus 216 v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqm 295 (505)
++.+++++.+. .+.+++-+=.+..++-+.+ .+|.+-||.+++. ..+ +++++.+.||||++.|-|
T Consensus 75 l~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~~d~~kIga~~~~------n~~-----ll~~~a~~~kPV~lk~G~ 138 (280)
T 2qkf_A 75 LKIFEKVKAEF--GIPVITDVHEPHQCQPVAE---VCDVIQLPAFLAR------QTD-----LVVAMAKTGNVVNIKKPQ 138 (280)
T ss_dssp HHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGTT------BHH-----HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---hCCEEEECccccc------CHH-----HHHHHHcCCCcEEEECCC
Confidence 44455555443 3677777777766665555 4799999876654 233 555556789999997765
Q ss_pred hHhhhcCCCCChHHHHHHHHHHH-cCCceeeecccCCCCCCHH-----HHHHHHHH
Q 010627 296 LESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGETAAGAYPE-----VAVRTMAQ 345 (505)
Q Consensus 296 LeSM~~~~~ptraEv~Dv~nav~-~G~D~imLs~Eta~G~yP~-----~~V~~m~~ 345 (505)
- -|-.|+...+..+. .|.+-++|-.=+..-.|+- .++..|++
T Consensus 139 ~--------~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~ 186 (280)
T 2qkf_A 139 F--------LSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQ 186 (280)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHH
Confidence 3 24457777666654 5765455533332224432 35555543
No 398
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=29.80 E-value=2.3e+02 Score=28.20 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|++.|.++.+- .|..+....+...-..|++-+...+ .| -++.+...+++++-...+ |
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~-~ 168 (364)
T 4h27_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWV-Y 168 (364)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEE-E
T ss_pred HHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeE-E
Confidence 4667789999998763 1222222344555567998776642 23 356666666554321111 1
Q ss_pred hhhHHhhhhCCCCCCCc--hhhHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hC-CCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSP--LESLASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YR-PGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~R-P~~pIiav 418 (505)
-.-| .++ .+.-...+.++..+++ .+.||+.+-+|.|.--+++ .. |.++|+++
T Consensus 169 ~~~~----------~np~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigV 229 (364)
T 4h27_A 169 IPPF----------DDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAM 229 (364)
T ss_dssp ECSS----------CSHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred eCCC----------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEE
Confidence 1001 112 1111233456666764 6999999999998665443 33 88999999
No 399
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=29.79 E-value=1.1e+02 Score=28.33 Aligned_cols=127 Identities=15% Similarity=0.177 Sum_probs=82.3
Q ss_pred hcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHH----Hh--cCCeeEEecCc
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDI----LA--NSDAFMVARGD 261 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI----~~--~sDgImIaRgD 261 (505)
+|.+++ +.+++..++++++.+. +-..+.++.+.++++++ .++.-++..+|+.+=+.= .. -+|||+=
T Consensus 17 r~~~~l-~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIs---- 88 (192)
T 3kts_A 17 HNQKDM-EKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIIS---- 88 (192)
T ss_dssp SSSHHH-HHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEE----
T ss_pred cCHHHH-HHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEe----
Confidence 577788 8889999999999986 55778888888888775 555588877777542221 11 2577763
Q ss_pred ccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHH
Q 010627 262 LGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVR 341 (505)
Q Consensus 262 Lg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~ 341 (505)
.+...+..+++.|..+|-=-=++||+.. -+-+...-....|++ |---|-.| +
T Consensus 89 ------------Tk~~~i~~Ak~~gL~tIqR~FliDS~al--------~~~~~~i~~~~PD~i----EiLPGi~p----~ 140 (192)
T 3kts_A 89 ------------TRGNAIMKAKQHKMLAIQRLFMIDSSAY--------NKGVALIQKVQPDCI----ELLPGIIP----E 140 (192)
T ss_dssp ------------SCHHHHHHHHHTTCEEEEEEECCSHHHH--------HHHHHHHHHHCCSEE----EEECTTCH----H
T ss_pred ------------CcHHHHHHHHHCCCeEEEEEEEEEcchH--------HHHHHHHhhcCCCEE----EECCchhH----H
Confidence 3567889999999998754446676532 122333334467887 33345556 3
Q ss_pred HHHHHHHHH
Q 010627 342 TMAQICVEA 350 (505)
Q Consensus 342 ~m~~i~~~a 350 (505)
++.++.++.
T Consensus 141 iI~~i~~~~ 149 (192)
T 3kts_A 141 QVQKMTQKL 149 (192)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 445554443
No 400
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=29.74 E-value=4.1 Score=42.33 Aligned_cols=122 Identities=18% Similarity=0.203 Sum_probs=0.0
Q ss_pred CCCCCCCCcccccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCC-----CCHHHHHHHHHHHHHHHHHcCCeeE
Q 010627 1 MDANCGVSTAIEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSH-----GSHEYHQETLNNLRTAMVNTGILCA 75 (505)
Q Consensus 1 ~~~~~~~~~~~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~sh-----g~~~~~~~~i~~ir~~~~~~~~~v~ 75 (505)
.|.|.|++.. .-.-.|+|-+++ | .|+.+++.|....=| +|| |..+....+---.+..++.+++||.
T Consensus 22 vD~NVPl~~g-~Itdd~RI~aal-p------TIk~ll~~gak~Vil-~SHlGRP~g~~~~~~SL~pva~~L~~lLg~~V~ 92 (415)
T 1qpg_A 22 VDFNVPLDGK-KITSNQRIVAAL-P------TIKYVLEHHPRYVVL-ASHLGQPNGERNEKYSLAPVAKELQSLLGKDVT 92 (415)
T ss_dssp CCCCCCBSSS-SBSCCHHHHHHH-H------HHHHHHTTCCSEEEE-ECCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCE
T ss_pred ecCCCcccCC-ccCChHHHHHHH-H------HHHHHHHCCCCEEEE-EecCCCCCCCCCCccCHHHHHHHHHHHHCCCce
Q ss_pred EEEecCCCeeEEeecCCCCcEEecCCCEEEEEecCCCCCCc----------cEEEecchh----hhcccCCCCEEEEeCC
Q 010627 76 VMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDE----------NMICMSYKK----LAVDVQPGSVILCSDG 141 (505)
Q Consensus 76 i~~Dl~GpkiR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~----------~~i~v~~~~----~~~~v~~Gd~I~idDG 141 (505)
..-|.-||+.+ -.+.. |+.|+.+.|-.-.-..+.+ + |.++ |.+.+..--.||++|.
T Consensus 93 f~~d~~G~~~~-~~v~~-----l~~G~VlLLEN~RF~~~E~g~~~~~~~~~k----nd~~~~~~fa~~LA~l~DvyVNDA 162 (415)
T 1qpg_A 93 FLNDCVGPEVE-AAVKA-----SAPGSVILLENLRYHIEEEGSRKVDGQKVK----ASKEDVQKFRHELSSLADVYINDA 162 (415)
T ss_dssp EESCSSSHHHH-HHHHT-----CCTTEEEEECCGGGSHHHHTEEEETTEEEE----CCHHHHHHHHHHHHHTCSEEEECC
T ss_pred eCCCcCCHHHH-HHHhc-----CCCCeEEEeccCccChhhccccccccchhc----cCHHHHHHHHHHHHhhCCEEEecc
No 401
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=29.60 E-value=70 Score=31.10 Aligned_cols=82 Identities=9% Similarity=0.083 Sum_probs=52.2
Q ss_pred cccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHH
Q 010627 196 WGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQ 275 (505)
Q Consensus 196 ~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~q 275 (505)
|.++..+=.-.+..-=+..+.-.+--.+ |. .++++ + +.+-++|+++.+|++.|+.|=|. ++.....
T Consensus 12 ~~~~~~Plvh~iTN~V~~n~~AN~~La~---Ga-sP~M~--~---~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~ 77 (273)
T 3dzv_A 12 FPLTTAPLIQCITNEITCESMANALLYI---DA-KPIMA--D---DPREFPQMFQQTSALVLNLGHLS-----QEREQSL 77 (273)
T ss_dssp CSCCSCCEEEEECCTTTHHHHHHHHHHT---TC-EEECC--C---CGGGHHHHHTTCSEEEEECCSCC-----HHHHHHH
T ss_pred ccCCCCCEEEEecCcchhhhHHHHHHHc---CC-chhhc--C---CHHHHHHHHHHCCeEEEecCCCC-----hHHHHHH
Confidence 4444444333444444555555544333 32 35555 2 35678889999999999988763 3445566
Q ss_pred HHHHHHHHHcCCCeEE
Q 010627 276 KVMIYKCNIQGKPVVT 291 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ 291 (505)
...++.++++++|+++
T Consensus 78 ~~a~~~a~~~~~PvVl 93 (273)
T 3dzv_A 78 LAASDYARQVNKLTVV 93 (273)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCcEEE
Confidence 7777889999999876
No 402
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=29.50 E-value=72 Score=34.07 Aligned_cols=67 Identities=7% Similarity=-0.054 Sum_probs=50.4
Q ss_pred HHHHHHHHhccCCCceEEEEecCHHHH-hcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 216 LVGVRKLLGGHAKNILLMSKVENQEGV-ANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 216 v~~v~~~l~~~~~~~~IiakIEt~~av-~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
+..+++.|.+.|..+.+.+--+....+ +|.+++++-.|.|+.+-.++ ..+..+-+.|+++++|+|.+
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~----------~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPE----------STSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEE
Confidence 566677788888888887776666554 46667777789888874322 36788889999999999876
No 403
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=29.44 E-value=2.7e+02 Score=26.83 Aligned_cols=117 Identities=11% Similarity=0.133 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- .|.......+...-..|++-+...++. .| .++.+...+++++-...+++
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 4667888999998763 122222334555666799977765431 12 35666555554432211011
Q ss_pred hhhHHhhhhCCCCCCCchhh---HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----C-CCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLES---LASSAVRTANSAR--ATLILVLTRGGSTAKLVAKY----R-PGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~~----R-P~~pIiav 418 (505)
-.-| .++... ....+.++..+++ .+.||+.+-+|.++--++++ . |...|+++
T Consensus 141 ~~~~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~v 202 (316)
T 1y7l_A 141 LKQF----------ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAV 202 (316)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEE
T ss_pred CCCC----------CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEE
Confidence 0001 122111 2233566777765 68999999999997766653 4 99999999
No 404
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=29.41 E-value=2.4e+02 Score=27.40 Aligned_cols=92 Identities=12% Similarity=0.188 Sum_probs=52.9
Q ss_pred HHHHHHHHcCCceeeecccCC-CCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCc-hhhHHHHHHHHHHhc
Q 010627 311 TDVANAVLDGTDCVMLSGETA-AGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSP-LESLASSAVRTANSA 388 (505)
Q Consensus 311 ~Dv~nav~~G~D~imLs~Eta-~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~~av~~a~~~ 388 (505)
...-..+.+|+|-|=+.+|.+ -|.-|+..-+-+.++..-.|... ..+ ..+...+. ...++.+|+ +.
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~---~~~-----~~piSIDT~~~~va~aAl----~a 109 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIA---QRF-----EVWISVDTSKPEVIRESA----KV 109 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHH---HHC-----CCEEEEECCCHHHHHHHH----HT
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHH---hhc-----CCeEEEeCCCHHHHHHHH----Hc
Confidence 345568899999999999865 56556555555555554444310 000 11111111 122444444 44
Q ss_pred CCcEEEEEcCCc----hHHHHHHhhCCCCcEEEE
Q 010627 389 RATLILVLTRGG----STAKLVAKYRPGMPILSV 418 (505)
Q Consensus 389 ~a~~Ivv~T~sG----~ta~~ls~~RP~~pIiav 418 (505)
+++. +-.-|| ..+..+++| .+|++.+
T Consensus 110 Ga~i--INdvsg~~d~~~~~~~a~~--~~~vVlm 139 (282)
T 1aj0_A 110 GAHI--INDIRSLSEPGALEAAAET--GLPVCLM 139 (282)
T ss_dssp TCCE--EEETTTTCSTTHHHHHHHH--TCCEEEE
T ss_pred CCCE--EEECCCCCCHHHHHHHHHh--CCeEEEE
Confidence 8884 444444 677888888 4899998
No 405
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=29.41 E-value=5.6e+02 Score=27.55 Aligned_cols=133 Identities=19% Similarity=0.292 Sum_probs=80.5
Q ss_pred eCCeEEEEEEEEeeeCCeEEEEEeeCceecCCCCcccCCcc-----------------ccCCCC-ChhcHHHHHhccccc
Q 010627 139 SDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVI-----------------VDLPTL-TEKDKEDILKWGIPN 200 (505)
Q Consensus 139 dDG~i~l~V~~v~~~~~~i~~~v~~gG~l~s~Kgvnlp~~~-----------------~~l~~l-te~D~~di~~~al~~ 200 (505)
+++.+..+|. .+..+. -+=|.--++..+++|... +-+|.+ +..|.+.++++..+.
T Consensus 139 ~~~~i~~~v~----~gg~l~---~~KgvnlPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~ 211 (587)
T 2e28_A 139 QAGEIVTTVL----NGGVLK---NKKGVNVPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAH 211 (587)
T ss_dssp TTTEEEEECC----SCCCBC---SSCBEECTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEe----cCCEEc---CCceeecCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4556666665 233332 234667788888888421 112322 677888874454456
Q ss_pred CC-CEEEEcCCCChhHHHHHHHHHh---------------------------------ccCCCceEEE------EecC--
Q 010627 201 QI-DMIALSFVRKGSDLVGVRKLLG---------------------------------GHAKNILLMS------KVEN-- 238 (505)
Q Consensus 201 g~-d~V~~sfV~sa~dv~~v~~~l~---------------------------------~~~~~~~Iia------kIEt-- 238 (505)
|. +..+++++++++-++.+.+++. .+| .+.++| +|++
T Consensus 212 ~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~g-kpvi~ATQmLeSMi~~p~ 290 (587)
T 2e28_A 212 DALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLG-KPVITATQMLDSMQRNPR 290 (587)
T ss_dssp TCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHT-CCEEEESSSSGGGGTCSS
T ss_pred CCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcC-CCeEEechhhHhhccCCC
Confidence 64 6788999999999988877663 112 233443 5555
Q ss_pred ---HHHHhcHHHHHhcCCeeEE----ecCcccCcCCchhHHHHHHHHHHHHHH
Q 010627 239 ---QEGVANFDDILANSDAFMV----ARGDLGMEIPIEKIFLAQKVMIYKCNI 284 (505)
Q Consensus 239 ---~~av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~~~~ 284 (505)
+|.-+=...|+.-+|++|+ +.|+ +|.+- -..+.+|+..+.+
T Consensus 291 PTRAE~sDvanav~dG~DavMLSgETA~G~----yPvea-V~~m~~I~~~~E~ 338 (587)
T 2e28_A 291 PTRAEASDVANAIFDGTDAVMLSGETAAGQ----YPVEA-VKTMHQIALRTEQ 338 (587)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEESHHHHTCS----CHHHH-HHHHHHHHHHHHT
T ss_pred ccHHHHhccchhhhhCcceeeecccccCCC----CHHHH-HHHHHHHHHHHhh
Confidence 4666667778888999998 4443 33332 2344555555544
No 406
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=29.28 E-value=1.7e+02 Score=28.12 Aligned_cols=27 Identities=26% Similarity=0.400 Sum_probs=17.5
Q ss_pred cCCCeeEEeecCCCCcEEecCCCEEEE
Q 010627 80 TKGPEIRTGFLKDGKPIQLKQGQEITI 106 (505)
Q Consensus 80 l~GpkiR~g~~~~~~~i~l~~G~~v~l 106 (505)
..||+.|+.-...-..=.|++|+.|.|
T Consensus 117 s~Gr~~~V~Vsp~Vd~e~LkPG~rVaL 143 (251)
T 3m9b_A 117 TSGRKMRLTCSPNIDAASLKKGQTVRL 143 (251)
T ss_dssp CSSSCCEECBCTTSCTTTSCSSCEEEE
T ss_pred eCCceEEEEeCCCCCHHHCCCCCEEEe
Confidence 468888886443201125899999988
No 407
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=29.23 E-value=2.3e+02 Score=25.91 Aligned_cols=44 Identities=9% Similarity=0.004 Sum_probs=32.4
Q ss_pred cHHHHHhcccccCCCEEEEcCC---------------CChhHHHHHHHHHhccCCCceE
Q 010627 189 DKEDILKWGIPNQIDMIALSFV---------------RKGSDLVGVRKLLGGHAKNILL 232 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV---------------~sa~dv~~v~~~l~~~~~~~~I 232 (505)
+..+..+.+.++|+|+|=+... .+++++.++++.+.+.|-.+..
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 81 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG 81 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 3444448888999999988642 3578899999999888755443
No 408
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=29.08 E-value=84 Score=31.20 Aligned_cols=69 Identities=10% Similarity=0.008 Sum_probs=37.2
Q ss_pred HHHHHhcccccCCCEEEEcCC-----------CC-----------hhHHHHHHHHHhccCCCceEEE--EecCHHHHhcH
Q 010627 190 KEDILKWGIPNQIDMIALSFV-----------RK-----------GSDLVGVRKLLGGHAKNILLMS--KVENQEGVANF 245 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV-----------~s-----------a~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nl 245 (505)
.+++ +.+.+.|+|+|.++-- +. ......+++..... .++.||+ -|-+++-+ .
T Consensus 192 ~~~a-~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~--~ 267 (349)
T 1p0k_A 192 KASA-GKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDV--A 267 (349)
T ss_dssp HHHH-HHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHH--H
T ss_pred HHHH-HHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHH--H
Confidence 4456 6778899999999721 10 11122233222222 3567776 35554333 2
Q ss_pred HHHHhcCCeeEEecCcc
Q 010627 246 DDILANSDAFMVARGDL 262 (505)
Q Consensus 246 deI~~~sDgImIaRgDL 262 (505)
+.+..-+|+++|||.=|
T Consensus 268 k~l~~GAd~V~iG~~~l 284 (349)
T 1p0k_A 268 KAIALGASCTGMAGHFL 284 (349)
T ss_dssp HHHHTTCSEEEECHHHH
T ss_pred HHHHcCCCEEEEcHHHH
Confidence 22333489999998543
No 409
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=29.02 E-value=78 Score=29.83 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=60.9
Q ss_pred CEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc--CCeeEEecCcccCcCCchhHHHHHHHHHH
Q 010627 203 DMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIY 280 (505)
Q Consensus 203 d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~ 280 (505)
..++.|| +.+.+..+++.. .++.+..-.+.. -.+..+.++. .+++-..- ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~~----p~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~~------------~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKALW----PEIARGYNVSAI--PSAWQERLEHLDCAGLHIHQ------------SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHHC----TTSCEEEECSSC--CTTHHHHHHHHTCSEEEEEG------------GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHHC----CCCcEEEEEecC--chhHHHHHHHcCCeEEecch------------hhCCHHHHH
Confidence 4677787 666677776643 334444433321 0122233332 23333221 122357899
Q ss_pred HHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHH
Q 010627 281 KCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMA 344 (505)
Q Consensus 281 ~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~ 344 (505)
.++++|++|.+=|- - +-.++..++..|+|+|+- .||....+.+.
T Consensus 205 ~~~~~G~~v~~WTv----------n---~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI----------N---DESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp HHHHTTCEEEEECC----------C---CHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC----------C---CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 99999999988661 1 234567777899999987 68988877764
No 410
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=28.97 E-value=57 Score=31.95 Aligned_cols=52 Identities=19% Similarity=0.411 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCcEEEEecCC-----CC----HH-----------HHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 30 VPMIEKLLKAGMNVARFNFSH-----GS----HE-----------YHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 30 ~~~i~~li~~G~~~~RlN~sh-----g~----~~-----------~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
.+.++.|-+.|+|++|+-++. +. .+ ...+.++.+=+.+.+.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G--i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG--LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 678899999999999999873 21 00 13445555445555677 4478888754
No 411
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=28.89 E-value=47 Score=33.03 Aligned_cols=47 Identities=9% Similarity=0.225 Sum_probs=35.7
Q ss_pred EEecCCCCCCHHHHHHHHHhC--CcEEEEecCCCCHHHHHHHHHHHHHH
Q 010627 20 VCTLGPASRSVPMIEKLLKAG--MNVARFNFSHGSHEYHQETLNNLRTA 66 (505)
Q Consensus 20 i~TiGp~~~~~~~i~~li~~G--~~~~RlN~shg~~~~~~~~i~~ir~~ 66 (505)
.+-+|...+..+..+.++++| ++..-+|++||+.....+.|+.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 333565444556778899999 99999999999887777788888764
No 412
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=28.85 E-value=85 Score=30.08 Aligned_cols=52 Identities=12% Similarity=0.238 Sum_probs=33.5
Q ss_pred CHHHHHHHHHhCCcEEEEecCCC---------CH-HHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSHG---------SH-EYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~shg---------~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
+.+.++.|-+.|+|++|+-++.. .. +...+.++.+=+.+.+.| +.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG--LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 57889999999999999986521 11 222334444444455666 447788853
No 413
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=28.79 E-value=2.2e+02 Score=27.91 Aligned_cols=92 Identities=11% Similarity=0.164 Sum_probs=54.2
Q ss_pred HHHHhc-CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHc---CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHc
Q 010627 246 DDILAN-SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQ---GKPVVTATQMLESMIKSPRPTRAEATDVANAVLD 319 (505)
Q Consensus 246 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~---gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~ 319 (505)
+-.++. .||+++. |--| ..+..++- +++++.+.++ ..||+..|- ..+-.|..+.+....+
T Consensus 35 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er----~~v~~~~~~~~~grvpViaGvg---------~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 35 EHLLAHHTDGILLA-GTTAESPTLTHDEE----LELFAAVQKVVNGRVPLIAGVG---------TNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHTTCCCEEES-STTTTGGGSCHHHH----HHHHHHHHHHSCSSSCEEEECC---------CSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHH----HHHHHHHHHHhCCCCcEEEeCC---------CcCHHHHHHHHHHHHh
Confidence 344433 6999985 3222 22333443 3444444432 368886542 3455677777776665
Q ss_pred -CC-ceeeecccCCCCCCHHHHHHHHHHHHHHHh
Q 010627 320 -GT-DCVMLSGETAAGAYPEVAVRTMAQICVEAE 351 (505)
Q Consensus 320 -G~-D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 351 (505)
|+ |++|+..=--...-+-+.++....|+.++.
T Consensus 101 ~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~ 134 (311)
T 3h5d_A 101 FGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASD 134 (311)
T ss_dssp SCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCS
T ss_pred cCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 87 999996443333345678888888887664
No 414
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=28.76 E-value=2.1e+02 Score=27.60 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=64.6
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- | |.......+...-..|++-+....+. .| .++.+...+++++-.. + +
T Consensus 79 a~A~~a~~~G~~~~iv------~-----p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~-~-~ 141 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLV------M-----PDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY-F-M 141 (308)
T ss_dssp HHHHHHHHHTCEEEEE------E-----ESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC-B-C
T ss_pred HHHHHHHHcCCCEEEE------E-----CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC-C-c
Confidence 4677888999998663 1 21111234455566799987775431 12 4666666666544322 1 1
Q ss_pred hhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLESLASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
..-|. . +.....-....+.++..+++ .+.||+.+-+|.++--+++ ..|...|+++
T Consensus 142 ~~~~~-----n--~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigv 202 (308)
T 2egu_A 142 PQQFK-----N--EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAV 202 (308)
T ss_dssp C---------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCcCC-----C--hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 11111 1 11110001222344555543 6899999999999765554 4699999999
No 415
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=28.72 E-value=3.3e+02 Score=32.92 Aligned_cols=116 Identities=14% Similarity=0.044 Sum_probs=69.4
Q ss_pred ccccCCCEEEEcC---CCChhHHHHHHHHHhccCCCceEEEEecCHHHHhc-HHHHHhc-CCeeEEecCccc--------
Q 010627 197 GIPNQIDMIALSF---VRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVAN-FDDILAN-SDAFMVARGDLG-------- 263 (505)
Q Consensus 197 al~~g~d~V~~sf---V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~n-ldeI~~~-sDgImIaRgDLg-------- 263 (505)
.+..|++.+.-+- ..+.+++.++-+.+++.+...+|+.|+=.-.++.. .....++ +|+|.|.-.+=|
T Consensus 993 ~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~ 1072 (1520)
T 1ofd_A 993 RSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSS 1072 (1520)
T ss_dssp TSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHH
T ss_pred CCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchh
Confidence 4667787664332 35667777766677766667788888643212211 1223333 799999422211
Q ss_pred ---CcCCchhHHHHHHHHHHHHHHc----CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 264 ---MEIPIEKIFLAQKVMIYKCNIQ----GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 264 ---~e~~~~~v~~~qk~Ii~~~~~~----gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.-+|. ...-..+.++..+. ..|+|.+..+- --.||+.|+..|||++.+.
T Consensus 1073 ~~~~GlPt---~~aL~ev~~al~~~glr~~IpVIAdGGIr------------tG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1073 IKHAGSPW---ELGVTEVHRVLMENQLRDRVLLRADGGLK------------TGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp HHHBCCCH---HHHHHHHHHHHHHTTCGGGCEEEEESSCC------------SHHHHHHHHHTTCSEEECS
T ss_pred hcCCchhH---HHHHHHHHHHHHhcCCCCCceEEEECCCC------------CHHHHHHHHHcCCCeeEEc
Confidence 11222 23334444555544 47888877655 3579999999999999884
No 416
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=28.64 E-value=2e+02 Score=27.66 Aligned_cols=115 Identities=13% Similarity=0.119 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- .|.......+...-..|++-+....+ |. ..++.+...+++++.+.. |
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~--~ 137 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK--L 137 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE--E
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc--c
Confidence 4667888999998662 12222233445566679998777542 12 335555554444331111 1
Q ss_pred hhhHHhhhhCCCCCCCchhh---HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLES---LASSAVRTANSAR--ATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~~--a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
...| .++... ....+.++..+++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 138 ~~~~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 198 (303)
T 2v03_A 138 LDQF----------NNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGL 198 (303)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEE
T ss_pred cCCc----------CChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEE
Confidence 1001 112111 1223456666664 6999999999999776554 3688999999
No 417
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=28.63 E-value=83 Score=30.40 Aligned_cols=74 Identities=19% Similarity=0.110 Sum_probs=47.4
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceE-EEEecCHHH--------HhcHHHHHhc-CCeeEEecCcccC
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILL-MSKVENQEG--------VANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~I-iakIEt~~a--------v~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+.+.+.|+|+|..| +.++..+|+.+. .+..+ ..=|-- ++ +-++.+.++. +|.+++||+=+..
T Consensus 151 ~~a~~~G~dGvV~s----~~e~~~ir~~~~---~~f~~vtPGIr~-~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a 222 (259)
T 3tfx_A 151 KMAKHSGADGVICS----PLEVKKLHENIG---DDFLYVTPGIRP-AGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLA 222 (259)
T ss_dssp HHHHHTTCCEEECC----GGGHHHHHHHHC---SSSEEEECCCCC-C-----------CHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHhCCCEEEEC----HHHHHHHHhhcC---CccEEEcCCcCC-CCCCcCCccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 55677899999876 889999999874 33333 333321 22 2356666665 8999999987777
Q ss_pred cCCchhHHHHHH
Q 010627 265 EIPIEKIFLAQK 276 (505)
Q Consensus 265 e~~~~~v~~~qk 276 (505)
+=|.+.+..+++
T Consensus 223 ~dp~~a~~~i~~ 234 (259)
T 3tfx_A 223 SDPKAAYEAIKK 234 (259)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 656554444443
No 418
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=28.38 E-value=92 Score=31.48 Aligned_cols=62 Identities=11% Similarity=0.192 Sum_probs=41.7
Q ss_pred CeEEEEecCCCCC-CHH----HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 16 KTKIVCTLGPASR-SVP----MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 16 ~tkIi~TiGp~~~-~~~----~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
+....+|+|-... +++ ..+++.++|.+.+.+...|++.+.-.+.++.+|++. +.-+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---GDAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---CTTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---CCCCEEEEEC
Confidence 3445566543322 454 445678899999999999988888888888888863 3223355554
No 419
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=28.31 E-value=1.1e+02 Score=30.51 Aligned_cols=54 Identities=19% Similarity=0.224 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCC---------H-HHHHHHHHHHHHHHHHcCCeeEEEEecCCC
Q 010627 28 RSVPMIEKLLKAGMNVARFNFSHGS---------H-EYHQETLNNLRTAMVNTGILCAVMLDTKGP 83 (505)
Q Consensus 28 ~~~~~i~~li~~G~~~~RlN~shg~---------~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 83 (505)
.+.+.++.|-+.|+|++||-++... . +...+.++.+=+...+.| +.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G--i~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG--LYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCCc
Confidence 3688999999999999999876421 1 223334444444444556 5588898753
No 420
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=28.30 E-value=77 Score=31.96 Aligned_cols=63 Identities=19% Similarity=0.180 Sum_probs=36.2
Q ss_pred HHHHhcccccCCCEEEEcCCC---------ChhHHHHHHHHHhccCCCceEEE--EecCHHHHhcHHHHHhcCCeeEEec
Q 010627 191 EDILKWGIPNQIDMIALSFVR---------KGSDLVGVRKLLGGHAKNILLMS--KVENQEGVANFDDILANSDAFMVAR 259 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~---------sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~sDgImIaR 259 (505)
+++ +.+.+.|+|+|.++--- +.+-+.++++.+ ..++.||+ -|-+.+-+ ...+..-+|+++|||
T Consensus 237 e~a-~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~---~~~ipvia~GGI~~~~D~--~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 237 EDA-RLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAA---QGRIPVFLDGGVRRGTDV--FKALALGAAGVFIGR 310 (370)
T ss_dssp HHH-HHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHT---TTSSCEEEESSCCSHHHH--HHHHHHTCSEEEECH
T ss_pred HHH-HHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHh---CCCCEEEEECCCCCHHHH--HHHHHcCCCEEeecH
Confidence 456 77789999999996421 122244444433 33567776 35554322 222222379999987
No 421
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=28.27 E-value=4.2e+02 Score=25.75 Aligned_cols=145 Identities=9% Similarity=0.031 Sum_probs=0.0
Q ss_pred HhcccccCCCEEEEcCCCCh--------hHHHHHHHHHhccCCCceEEE-----Ee---cCH-HHHhcHHHHHhc--CCe
Q 010627 194 LKWGIPNQIDMIALSFVRKG--------SDLVGVRKLLGGHAKNILLMS-----KV---ENQ-EGVANFDDILAN--SDA 254 (505)
Q Consensus 194 ~~~al~~g~d~V~~sfV~sa--------~dv~~v~~~l~~~~~~~~Iia-----kI---Et~-~av~nldeI~~~--sDg 254 (505)
++.+++.|+|+|-+--.-.. +.+.++.+.+.+.|....+.. .+ -.+ +.+...-.++.. +|.
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~ 193 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADL 193 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSE
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCE
Q ss_pred eEEec-CcccCcCCchhHHHHHHHHHHHHHHcCCC-eEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCC
Q 010627 255 FMVAR-GDLGMEIPIEKIFLAQKVMIYKCNIQGKP-VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAA 332 (505)
Q Consensus 255 ImIaR-gDLg~e~~~~~v~~~qk~Ii~~~~~~gkp-vi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~ 332 (505)
+=+.. .| +......+.+.+-......+.| |+++.-. +...=...+..++..|++++....-+.-
T Consensus 194 iKv~~~~~-----~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~---------~~~~~~~~~~~a~~aGa~Gv~vGRaI~q 259 (304)
T 1to3_A 194 YKVEMPLY-----GKGARSDLLTASQRLNGHINMPWVILSSGV---------DEKLFPRAVRVAMEAGASGFLAGRAVWS 259 (304)
T ss_dssp EEECCGGG-----GCSCHHHHHHHHHHHHHTCCSCEEECCTTS---------CTTTHHHHHHHHHHTTCCEEEESHHHHG
T ss_pred EEeCCCcC-----CCCCHHHHHHHHHhccccCCCCeEEEecCC---------CHHHHHHHHHHHHHcCCeEEEEehHHhC
Q ss_pred C----CCHHHHH--------HHHHHHHHHHhc
Q 010627 333 G----AYPEVAV--------RTMAQICVEAES 352 (505)
Q Consensus 333 G----~yP~~~V--------~~m~~i~~~aE~ 352 (505)
- ..|.+.+ +.+++++.+...
T Consensus 260 ~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~ 291 (304)
T 1to3_A 260 SVIGLPDTELMLRDVSAPKLQRLGEIVDEMMG 291 (304)
T ss_dssp GGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHhhchHHHHHHHHHHhcCCC
No 422
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=28.17 E-value=1.1e+02 Score=31.04 Aligned_cols=95 Identities=12% Similarity=0.109 Sum_probs=52.5
Q ss_pred HHHHhcccccCCCEEEEcCCC------ChhHHHHHHHHHhccCCCceEEEE--ecCHHHHhcHHHHHhcCCeeEEecCcc
Q 010627 191 EDILKWGIPNQIDMIALSFVR------KGSDLVGVRKLLGGHAKNILLMSK--VENQEGVANFDDILANSDAFMVARGDL 262 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sfV~------sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~sDgImIaRgDL 262 (505)
++. +.+.+.|+|+|.++.-. .+..+..+.+.....+.++.||+- |-+..-+ +..++.-+|+++|||.=|
T Consensus 229 e~A-~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv--~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 229 EDA-ELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDV--LKALALGARCIFLGRPIL 305 (352)
T ss_dssp HHH-HHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHH--HHHHHTTCSEEEESHHHH
T ss_pred HHH-HHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHH--HHHHHcCCCEEEECHHHH
Confidence 455 67789999999995421 122333333333222446788873 5553322 445554589999999654
Q ss_pred cCc--CCch----hHHHHHHHHHHHHHHcCCC
Q 010627 263 GME--IPIE----KIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 263 g~e--~~~~----~v~~~qk~Ii~~~~~~gkp 288 (505)
-.. .|.+ .+..+++++-......|..
T Consensus 306 ~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 337 (352)
T 3sgz_A 306 WGLACKGEDGVKEVLDILTAELHRCMTLSGCQ 337 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 210 1222 3344455555556666654
No 423
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=28.14 E-value=3.9e+02 Score=25.33 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=74.5
Q ss_pred CCccccCCCCChhcH-HHHHhcccccCCCEEE-----EcCCCChhHHHHHHHHHhccCCCceEEEEecCH----------
Q 010627 176 PGVIVDLPTLTEKDK-EDILKWGIPNQIDMIA-----LSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQ---------- 239 (505)
Q Consensus 176 p~~~~~l~~lte~D~-~di~~~al~~g~d~V~-----~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~---------- 239 (505)
|-.++++..-|.+|. +.+ +.+...|+|.|= +....+.+++.++-..+++.-.+.++|.-+=+.
T Consensus 20 PkIcvpl~~~t~~e~l~~a-~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~ 98 (258)
T 4h3d_A 20 PKICVPIIGKNKKDIIKEA-KELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISR 98 (258)
T ss_dssp CEEEEEECCSSHHHHHHHH-HHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCH
T ss_pred CEEEEEeCCCCHHHHHHHH-HHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCH
Confidence 555555544343332 233 455677888763 233444555555444444433456777766332
Q ss_pred -HHHhcHHHHHhc--CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHH-HHH
Q 010627 240 -EGVANFDDILAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATD-VAN 315 (505)
Q Consensus 240 -~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~D-v~n 315 (505)
+-++-+.+++.. +|.|=| |+. .-....+.+++.+++.|..+|++-+=+ +..|+..|+.. +..
T Consensus 99 ~~~~~ll~~~~~~~~~d~iDv-------El~--~~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP~~~el~~~~~~ 164 (258)
T 4h3d_A 99 DYYTTLNKEISNTGLVDLIDV-------ELF--MGDEVIDEVVNFAHKKEVKVIISNHDF-----NKTPKKEEIVSRLCR 164 (258)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE-------EGG--GCHHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCchhhHH-------hhh--ccHHHHHHHHHHHHhCCCEEEEEEecC-----CCCCCHHHHHHHHHH
Confidence 111222333322 344322 222 123467788999999999999876543 34788888755 444
Q ss_pred HHHcCCceeee
Q 010627 316 AVLDGTDCVML 326 (505)
Q Consensus 316 av~~G~D~imL 326 (505)
+...|+|-+=+
T Consensus 165 ~~~~gaDIvKi 175 (258)
T 4h3d_A 165 MQELGADLPKI 175 (258)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHhCCCEEEE
Confidence 66678887554
No 424
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=28.12 E-value=2.6e+02 Score=27.88 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=40.1
Q ss_pred eEEEEec-CCCCCCHHHH----HHHHHh-CCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 17 TKIVCTL-GPASRSVPMI----EKLLKA-GMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 17 tkIi~Ti-Gp~~~~~~~i----~~li~~-G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
...-+|+ |-...+++.+ +++++. |.+.+.+.+...+.++-.+.++.+|++ .|.-+.+++|.
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~---~g~~~~l~vDa 204 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER---VDSAVRIAIDG 204 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH---SCTTCEEEEEC
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH---cCCCCcEEeeC
Confidence 5677774 3223345443 357778 999999999877777777777777765 44334455554
No 425
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=28.06 E-value=96 Score=31.82 Aligned_cols=56 Identities=13% Similarity=0.159 Sum_probs=35.4
Q ss_pred CceEEEEecCHHHHhcHHHHHh--cCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 229 NILLMSKVENQEGVANFDDILA--NSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 229 ~~~IiakIEt~~av~nldeI~~--~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
.++|++ =|+......+.++++ .+|.|.+..+-+| .+ .--.+|...|+++|.|+..-
T Consensus 281 ~iPIa~-dE~~~~~~~~~~li~~~a~D~v~ik~~~~G------Gi-t~a~kia~~A~a~gi~v~~h 338 (412)
T 3stp_A 281 IVPISG-GEHEFSVIGCAELINRKAVSVLQYDTNRVG------GI-TAAQKINAIAEAAQIPVIPH 338 (412)
T ss_dssp SSCEEE-CTTCCSHHHHHHHHHTTCCSEECCCHHHHT------HH-HHHHHHHHHHHHHTCCBCCS
T ss_pred CCCEEe-CCCCCCHHHHHHHHHcCCCCEEecChhhcC------CH-HHHHHHHHHHHHcCCEEEec
Confidence 344443 466556666677775 3688887544333 12 22368899999999998754
No 426
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=28.01 E-value=2.7e+02 Score=26.35 Aligned_cols=107 Identities=16% Similarity=0.102 Sum_probs=70.4
Q ss_pred cHHHHHhcccccCCCEEEEc-----CCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh---c-CCeeEEec
Q 010627 189 DKEDILKWGIPNQIDMIALS-----FVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA---N-SDAFMVAR 259 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~s-----fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~---~-sDgImIaR 259 (505)
|..++.+...+.|+++|.+. |-.+.++++.+++.. +++|+.| ..+.+-..|.. . +|+|.++-
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v-----~lPvl~k----dfI~d~~qi~~a~~~GAD~VlL~~ 136 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV-----DLPLLRK----DFVVDPFMLEEARAFGASAALLIV 136 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC-----CSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEH
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc-----CCCEEEC----CcCCCHHHHHHHHHcCCCEEEECc
Confidence 44455466678899999883 445899999998854 4566554 34444433332 2 69999986
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeec
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 327 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs 327 (505)
.+|. ..-++++..++..|..+.+.++ +..|. ..+...|+|.+-++
T Consensus 137 ~~l~---------~~l~~l~~~a~~lGl~~lvev~-----------~~~E~---~~a~~~gad~IGvn 181 (254)
T 1vc4_A 137 ALLG---------ELTGAYLEEARRLGLEALVEVH-----------TEREL---EIALEAGAEVLGIN 181 (254)
T ss_dssp HHHG---------GGHHHHHHHHHHHTCEEEEEEC-----------SHHHH---HHHHHHTCSEEEEE
T ss_pred cchH---------HHHHHHHHHHHHCCCeEEEEEC-----------CHHHH---HHHHHcCCCEEEEc
Confidence 6663 1345677888889988776543 33444 46777899887664
No 427
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=28.00 E-value=78 Score=30.80 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHhCCcEEEEecCC---------CCH-HHHHHHHHHHHHHHHHcCCeeEEEEecC
Q 010627 28 RSVPMIEKLLKAGMNVARFNFSH---------GSH-EYHQETLNNLRTAMVNTGILCAVMLDTK 81 (505)
Q Consensus 28 ~~~~~i~~li~~G~~~~RlN~sh---------g~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 81 (505)
.+.+.++.|-+.|+|++||-++. |.. +...+.++.+=+.+.+.| +.+++|+-
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G--i~vildlh 90 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN--LGLVLDMH 90 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 35788999999999999998652 121 223344444444455666 44777774
No 428
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=27.94 E-value=93 Score=26.99 Aligned_cols=53 Identities=9% Similarity=0.079 Sum_probs=38.9
Q ss_pred HHhcHHHHHh--cCCeeEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeh
Q 010627 241 GVANFDDILA--NSDAFMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 241 av~nldeI~~--~sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~AT 293 (505)
.+..+++.+. ..|.|+| |-.|+....+.+.+..-.+.+++.+++.|.++++.|
T Consensus 50 ~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 50 GLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3444555443 3687666 555988777888888888999999999988887654
No 429
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=27.89 E-value=63 Score=30.93 Aligned_cols=52 Identities=13% Similarity=0.242 Sum_probs=33.5
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCC--HHHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSHGS--HEYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~shg~--~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
+.+.++.|-+.|+|++|+-++.|. .+...+.++.+=+.+.+.| +.+++|+-+
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--MVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 457899999999999999886441 1112333444444455566 457888864
No 430
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=27.89 E-value=1.4e+02 Score=30.25 Aligned_cols=96 Identities=11% Similarity=0.158 Sum_probs=56.6
Q ss_pred HHHHhcccccCCCEEEEcC-------CCChhHHHHHHHHHhccCCCceEEEEec---CHHHHhcHHHHHhc-CCeeEEec
Q 010627 191 EDILKWGIPNQIDMIALSF-------VRKGSDLVGVRKLLGGHAKNILLMSKVE---NQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 191 ~di~~~al~~g~d~V~~sf-------V~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-sDgImIaR 259 (505)
+.+.++.++.|+|++++.= ....|..+-++...+..+.+++||+-+= +.++++....-.+. +|++|+-+
T Consensus 83 ~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 83 DDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3333788899999998732 2223333333444444566789999873 55666655554444 69999865
Q ss_pred CcccCcCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010627 260 GDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTA 292 (505)
Q Consensus 260 gDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~A 292 (505)
-... ..+.+.+...-+.|.++ .|+++-
T Consensus 163 PyY~-k~sq~gl~~hf~~IA~a-----~PiilY 189 (360)
T 4dpp_A 163 PYYG-KTSIEGLIAHFQSVLHM-----GPTIIY 189 (360)
T ss_dssp CCSS-CCCHHHHHHHHHTTGGG-----SCEEEE
T ss_pred CCCC-CCCHHHHHHHHHHHHHh-----CCEEEE
Confidence 4332 23445555555555542 488763
No 431
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=27.83 E-value=1.2e+02 Score=28.47 Aligned_cols=40 Identities=8% Similarity=-0.162 Sum_probs=28.1
Q ss_pred HHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCce
Q 010627 190 KEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNIL 231 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~ 231 (505)
..+..+.+.++|+|+|=+..-- + ++.++++.+.+.|-.+.
T Consensus 33 ~~~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~ 72 (301)
T 3cny_A 33 LQQLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIA 72 (301)
T ss_dssp HHHHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEE
Confidence 3333377888999999776332 3 78889999988765443
No 432
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=27.79 E-value=1.4e+02 Score=29.21 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.5
Q ss_pred HHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010627 385 ANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 385 a~~~~a~~Ivv~T~sG~ta~~ls~~RP~~pIiav 418 (505)
-.+.+|.+|++--..-..++.+++--+ +|+|.+
T Consensus 170 ~~eAGA~~ivlE~vp~~~a~~it~~l~-iP~igI 202 (275)
T 1o66_A 170 HDDAGAAVVLMECVLAELAKKVTETVS-CPTIGI 202 (275)
T ss_dssp HHHTTCSEEEEESCCHHHHHHHHHHCS-SCEEEE
T ss_pred HHHcCCcEEEEecCCHHHHHHHHHhCC-CCEEEE
Confidence 356799999998776677888887664 999998
No 433
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=27.73 E-value=68 Score=30.76 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=34.1
Q ss_pred HhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 242 VANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 242 v~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
++.+.++++.+|.+.|+.|=+ -++.......+++.+++.++|+++
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVl 91 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEE
Confidence 556778888899999987654 334445566778889999999876
No 434
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=27.72 E-value=4.2e+02 Score=25.53 Aligned_cols=130 Identities=14% Similarity=0.126 Sum_probs=75.8
Q ss_pred CCChhcHHHHHhcccccCCCEEEEcCC-------------CChhHHHHHHHHHhccCCCceEEEEecC------HHHHhc
Q 010627 184 TLTEKDKEDILKWGIPNQIDMIALSFV-------------RKGSDLVGVRKLLGGHAKNILLMSKVEN------QEGVAN 244 (505)
Q Consensus 184 ~lte~D~~di~~~al~~g~d~V~~sfV-------------~sa~dv~~v~~~l~~~~~~~~IiakIEt------~~av~n 244 (505)
-+|-+|.--- +.+-+.|+|.+.+..- -|.+++..--+.+........|++=.+- .++++|
T Consensus 21 ~~tayD~~sA-~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 21 TITAYDYSFA-KLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp EEECCSHHHH-HHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred EEeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 3466777776 7778889999988631 1123333222223332345677777764 467888
Q ss_pred HHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeE----EehhhhHhh---hcCCCCChHH----HHH
Q 010627 245 FDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVV----TATQMLESM---IKSPRPTRAE----ATD 312 (505)
Q Consensus 245 ldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi----~ATqmLeSM---~~~~~ptraE----v~D 312 (505)
...+++. +++|-+--|+ -+...|+++.++|.||+ +--|-...+ ....+ |.++ +.|
T Consensus 100 a~rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~gr-t~~~a~~~i~r 166 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGR-GDEAGDQLLSD 166 (264)
T ss_dssp HHHHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCC-SHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeC-CHHHHHHHHHH
Confidence 8888874 5888875441 23455667778999986 222322111 11111 2222 244
Q ss_pred HHHHHHcCCceeeec
Q 010627 313 VANAVLDGTDCVMLS 327 (505)
Q Consensus 313 v~nav~~G~D~imLs 327 (505)
.......|+|+++|-
T Consensus 167 A~a~~eAGA~~ivlE 181 (264)
T 1m3u_A 167 ALALEAAGAQLLVLE 181 (264)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHHCCCcEEEEe
Confidence 455677799999883
No 435
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=27.61 E-value=53 Score=30.79 Aligned_cols=84 Identities=13% Similarity=0.030 Sum_probs=53.8
Q ss_pred HHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEE-EEecCHHHHhcHHHHHh-cCCeeEEecCcccCcCC
Q 010627 190 KEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLM-SKVENQEGVANFDDILA-NSDAFMVARGDLGMEIP 267 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~Ii-akIEt~~av~nldeI~~-~sDgImIaRgDLg~e~~ 267 (505)
...+.+.+.+.|+|++.+| ...++++..+|+.+. . ..++ .-|-- ++- ++.+.++ -+|.+++||+=+..+=|
T Consensus 117 v~~~a~~a~~~G~~GvV~s-at~~~e~~~ir~~~~---~-f~~v~pGI~~-~g~-~~~~a~~~Gad~iVvGr~I~~a~dp 189 (215)
T 3ve9_A 117 YPYLREVARRVNPKGFVAP-ATRPSMISRVKGDFP---D-KLVISPGVGT-QGA-KPGIALCHGADYEIVGRSVYQSADP 189 (215)
T ss_dssp HHHHHHHHHHHCCSEEECC-TTSHHHHHHHHHHCT---T-SEEEECCTTS-TTC-CTTHHHHTTCSEEEECHHHHTSSSH
T ss_pred HHHHHHHHHHcCCCceeeC-CCCHHHHHHHHHhCC---C-cEEEcCCCCc-CcC-CHHHHHHcCCCEEEeCHHHcCCCCH
Confidence 3344477888999998876 244788988888763 2 2333 33421 111 3444444 48999999999988877
Q ss_pred chhHHHHHHHHHH
Q 010627 268 IEKIFLAQKVMIY 280 (505)
Q Consensus 268 ~~~v~~~qk~Ii~ 280 (505)
.+....+++.+-+
T Consensus 190 ~~a~~~i~~~i~~ 202 (215)
T 3ve9_A 190 VRKLEEIVRSQEE 202 (215)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7666666555533
No 436
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=27.57 E-value=86 Score=32.17 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=42.3
Q ss_pred ceEEEEecCHHHHhcHHHHHhcCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010627 230 ILLMSKVENQEGVANFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 230 ~~IiakIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
-.+.+=||-..-.-++++.++-+|-|+-|-|=|=.+.-..++|. .+.+.|+++|+|||.
T Consensus 266 a~l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~---gVa~~A~~~~vPvia 324 (383)
T 3cwc_A 266 AQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIG 324 (383)
T ss_dssp CEEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEE
T ss_pred CEEccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHH---HHHHHHHHhCCCEEE
Confidence 34666667666677999999999999998776655554556664 566689999999974
No 437
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=27.53 E-value=1.6e+02 Score=26.01 Aligned_cols=59 Identities=12% Similarity=0.254 Sum_probs=39.6
Q ss_pred EEecCCCEEEEEec----CCCCCCccEEEecchhhhc---ccCCCCEEEEeCCeEEEEEEEEeeeCCeEE
Q 010627 96 IQLKQGQEITISTD----YTIKGDENMICMSYKKLAV---DVQPGSVILCSDGTISFTVLECNVKAGLVK 158 (505)
Q Consensus 96 i~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~---~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~ 158 (505)
.-++.|++.+++.. +...+......++-..|.. .+++|+.+.++ |. ..+|++ ++++.+.
T Consensus 62 ~gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~-~~-~~~V~~--v~~~~V~ 127 (157)
T 3pr9_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITID-GI-PGKIVS--INSGRVL 127 (157)
T ss_dssp HHCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEET-TE-EEEEEE--EETTEEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEec-CC-CeEEEE--EcCCEEE
Confidence 34789999999875 3344555566677677764 25679999986 44 357774 4666655
No 438
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=27.37 E-value=3.7e+02 Score=25.92 Aligned_cols=114 Identities=18% Similarity=0.195 Sum_probs=65.7
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccC
Q 010627 276 KVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLD 355 (505)
Q Consensus 276 k~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 355 (505)
.-+..+|+..|.++.+- | |....-..+...-..|++-+...+. | .++.+...+++.+-. .+
T Consensus 87 ~alA~~a~~~G~~~~iv------~-----p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~~- 147 (323)
T 1v71_A 87 QAIALSAKILGIPAKII------M-----PLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-LT- 147 (323)
T ss_dssp HHHHHHHHHTTCCEEEE------E-----ETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-CB-
T ss_pred HHHHHHHHHcCCCEEEE------C-----CCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-CE-
Confidence 34667789999998763 1 1111122455666679998766433 2 135555555544322 11
Q ss_pred chhhHHhhhhCCCCCCCc--hhhHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 356 YGDVFKRVMQHSPVPMSP--LESLASSAVRTANSA-RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~-~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
|-..| .++ .......+.++..++ +.+.||+.+-+|.|+--+++ +.|...|+++
T Consensus 148 ~i~~~----------~n~~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigv 207 (323)
T 1v71_A 148 IIPPY----------DHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGV 207 (323)
T ss_dssp CCCSS----------SSHHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ecCCC----------CCcchhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEE
Confidence 11001 011 111223345555555 47999999999999776554 4699999999
No 439
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=27.17 E-value=3.2e+02 Score=26.13 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=63.3
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- .|....-..+...-..|++-+...+. | .++.+...++.++- ..+ |
T Consensus 79 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~~~-~ 139 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-GYA-L 139 (311)
T ss_dssp HHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-CCE-E
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-CcE-e
Confidence 4667789999998763 12211122345556679887654332 3 24666666655432 111 1
Q ss_pred hhhHHhhhhCCCCCCCchhhHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLESLASSAVRTANSA-----RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-----~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
-.-|. . + .........+.++..++ +.+.|++.+-+|.|+--+++ ..|...|+++
T Consensus 140 ~~~~~-----n--~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigv 202 (311)
T 1ve5_A 140 IHPFD-----D--P-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGV 202 (311)
T ss_dssp CCSSS-----S--H-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCCC-----C--c-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 10010 0 0 01111222334444444 47899999999999776554 4799999999
No 440
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=27.15 E-value=1.2e+02 Score=30.01 Aligned_cols=102 Identities=17% Similarity=0.131 Sum_probs=50.3
Q ss_pred hhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHH
Q 010627 299 MIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLA 378 (505)
Q Consensus 299 M~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia 378 (505)
|..++.+|.+++.+.++-+.+. +|.=|+.-...+.+ ..-..++.+.-+ .+| .-+-.+..+
T Consensus 1 ~~~~~~~~~~~i~~a~~~i~~~-----------i~~TPL~~~~~l~~---~~g~~i~~K~E~-----~~p-tGSfK~Rga 60 (346)
T 3l6b_A 1 MDAQYDISFADVEKAHINIRDS-----------IHLTPVLTSSILNQ---LTGRNLFFKCEL-----FQK-TGSFKIRGA 60 (346)
T ss_dssp --CCCSSCHHHHHHHHHHHGGG-----------SCCCCEECCHHHHH---HHTSEEEEEEGG-----GSG-GGBTHHHHH
T ss_pred CCcccCCCHHHHHHHHHHHhcc-----------cCCCCeEEchhhHH---HhCCeEEEEeCC-----CCC-CCCcHHHHH
Confidence 3445678888888888877654 33334433333332 222223322110 111 111123345
Q ss_pred HHHHHHHHh----cCCcEEEEEcCCchHHHHHHhh--CCCCcEEEEeecc
Q 010627 379 SSAVRTANS----ARATLILVLTRGGSTAKLVAKY--RPGMPILSVVVPE 422 (505)
Q Consensus 379 ~~av~~a~~----~~a~~Ivv~T~sG~ta~~ls~~--RP~~pIiav~~p~ 422 (505)
...+..+.. .+.+.||..| +|++++.+|.+ +-..|.+.+ +|.
T Consensus 61 ~~~i~~a~~~g~~~~~~~vv~~S-sGNhg~a~A~aa~~~G~~~~iv-~p~ 108 (346)
T 3l6b_A 61 LNAVRSLVPDALERKPKAVVTHS-SGNHGQALTYAAKLEGIPAYIV-VPQ 108 (346)
T ss_dssp HHHHHTTC-----CCCSCEEEEC-SSHHHHHHHHHHHHTTCCEEEE-EET
T ss_pred HHHHHHHHHhccccCCCEEEEeC-CCHHHHHHHHHHHHhCCCEEEE-ECC
Confidence 555544433 2556666665 68888765543 346777777 564
No 441
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=26.84 E-value=2.1e+02 Score=28.14 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=47.4
Q ss_pred CCeEEEEecC--CCCCC-----------HHHHHHHHHhCCcEEEEecCCC--------CHHHHHHHHHHHHHHHHHcCCe
Q 010627 15 PKTKIVCTLG--PASRS-----------VPMIEKLLKAGMNVARFNFSHG--------SHEYHQETLNNLRTAMVNTGIL 73 (505)
Q Consensus 15 r~tkIi~TiG--p~~~~-----------~~~i~~li~~G~~~~RlN~shg--------~~~~~~~~i~~ir~~~~~~~~~ 73 (505)
.+++|++-+. |-|.+ .+..++|+++|+++.=+|.--. ..|+..+++..++...++.+.|
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vp 117 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLP 117 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSC
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCce
Confidence 4788988874 32221 2345789999999999997331 2577888887777776666766
Q ss_pred eEEEEecCCCee
Q 010627 74 CAVMLDTKGPEI 85 (505)
Q Consensus 74 v~i~~Dl~Gpki 85 (505)
|.+|+.-|++
T Consensus 118 --iSIDT~~~~V 127 (297)
T 1tx2_A 118 --ISIDTYKAEV 127 (297)
T ss_dssp --EEEECSCHHH
T ss_pred --EEEeCCCHHH
Confidence 6678865443
No 442
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=26.71 E-value=56 Score=28.13 Aligned_cols=54 Identities=11% Similarity=0.187 Sum_probs=40.3
Q ss_pred HHHhcHHHHHh--cCCeeEE--ecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeh
Q 010627 240 EGVANFDDILA--NSDAFMV--ARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 240 ~av~nldeI~~--~sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~AT 293 (505)
+.+.+++..+. ..|.|+| |-.|+....+.+.+..-.+++++.+++.+.++++.+
T Consensus 53 ~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 53 GALRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 34455666554 4687666 455887778888888889999999999998887654
No 443
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.69 E-value=1.4e+02 Score=27.70 Aligned_cols=44 Identities=9% Similarity=0.024 Sum_probs=30.9
Q ss_pred cHHHHHhcccccCCCEEEEcCCCCh----hHHHHHHHHHhccCCCceE
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKG----SDLVGVRKLLGGHAKNILL 232 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa----~dv~~v~~~l~~~~~~~~I 232 (505)
+..+..+.+.+.|+|+|=+..-... .++.++++.+.+.|-.+..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 3444337888899999988764422 6788999999877654443
No 444
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=26.60 E-value=1.4e+02 Score=29.37 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=37.8
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTG 71 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~ 71 (505)
+.+.+++.+++|.+-.-+..||-..|++.+.-+.+-+.+...|
T Consensus 86 ~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~g 128 (286)
T 1gvf_A 86 SLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQD 128 (286)
T ss_dssp CHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999998777777777776666
No 445
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=26.53 E-value=1.4e+02 Score=28.19 Aligned_cols=46 Identities=15% Similarity=0.123 Sum_probs=30.6
Q ss_pred HHHHHhcCCeeEEecC-c-----ccCcC----C--chhHHHHHHHHHHHHHHcCCCeE
Q 010627 245 FDDILANSDAFMVARG-D-----LGMEI----P--IEKIFLAQKVMIYKCNIQGKPVV 290 (505)
Q Consensus 245 ldeI~~~sDgImIaRg-D-----Lg~e~----~--~~~v~~~qk~Ii~~~~~~gkpvi 290 (505)
+++.++..||+++.-| | .+-+. + ...-......+++.+.+.+||++
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 6777888999999766 2 11111 0 12233456788899999999984
No 446
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=26.37 E-value=2.6e+02 Score=25.33 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=24.7
Q ss_pred hcccccCCCEEEEcCCCChhHHHHHHHHHhccCC
Q 010627 195 KWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAK 228 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~ 228 (505)
+.+.+.|+|+|=+.+- ...++.++++.+.+.|-
T Consensus 22 ~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl 54 (260)
T 1k77_A 22 AAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHL 54 (260)
T ss_dssp HHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTC
T ss_pred HHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCC
Confidence 7778899999988753 34567888888877653
No 447
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=26.25 E-value=75 Score=30.72 Aligned_cols=54 Identities=20% Similarity=0.157 Sum_probs=36.8
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCCC-----HHHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 27 SRSVPMIEKLL-KAGMNVARFNFSHGS-----HEYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 27 ~~~~~~i~~li-~~G~~~~RlN~shg~-----~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
..+.+.++.|. +.|+|++|+-+.+.. .++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDI--YVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTC--EEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 44678899998 579999999875421 12245566666666667774 47788864
No 448
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=26.24 E-value=1.4e+02 Score=28.61 Aligned_cols=86 Identities=10% Similarity=0.016 Sum_probs=46.2
Q ss_pred hcccccCCCEEEEcC--------CCCh--------------h----HHHHHHHHHhccCCCceEEE--EecCHHHHhcHH
Q 010627 195 KWGIPNQIDMIALSF--------VRKG--------------S----DLVGVRKLLGGHAKNILLMS--KVENQEGVANFD 246 (505)
Q Consensus 195 ~~al~~g~d~V~~sf--------V~sa--------------~----dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nld 246 (505)
+.+.+.|+|+|.++- .++. . .+..++++.+. .+++||+ -|-+++-+ .
T Consensus 183 ~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~--~~ipvia~GGI~~~~d~---~ 257 (311)
T 1ep3_A 183 KAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD--VDIPIIGMGGVANAQDV---L 257 (311)
T ss_dssp HHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT--CSSCEEECSSCCSHHHH---H
T ss_pred HHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh--cCCCEEEECCcCCHHHH---H
Confidence 667788999999952 2221 1 12333333222 2567776 35554433 3
Q ss_pred HHHh-cCCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCC
Q 010627 247 DILA-NSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKP 288 (505)
Q Consensus 247 eI~~-~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkp 288 (505)
+.++ -+|++++||+=|. +.+-+..+.+.+-......|.+
T Consensus 258 ~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 258 EMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp HHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCCC
Confidence 3332 3899999998665 3334444455444444444543
No 449
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=26.17 E-value=75 Score=31.15 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=45.4
Q ss_pred cHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-CCeeEEec
Q 010627 189 DKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN-SDAFMVAR 259 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-sDgImIaR 259 (505)
+.+.+ +.+++.|+|+|.+..+ ++++++++.+.+. .++++.| +=. --.+|+.++++. +|+|-++.
T Consensus 205 t~eea-~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A-sGG-It~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 205 SLEEL-EEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA-SGN-MTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SHHHH-HHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE-ESS-CCHHHHHHHHHHTCSEEECTH
T ss_pred CHHHH-HHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE-EcC-CCHHHHHHHHHcCCCEEEEcH
Confidence 45666 6778899999999986 7788888877764 2455555 111 015788888887 79998853
No 450
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=26.15 E-value=3.9e+02 Score=26.44 Aligned_cols=138 Identities=15% Similarity=0.211 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCceeeeccc-CCCCCC----HHHHHHHHHHHHHHHhcccCchhhHHhhhhCCCCCCCchhhHHHHHHHH
Q 010627 310 ATDVANAVLDGTDCVMLSGE-TAAGAY----PEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRT 384 (505)
Q Consensus 310 v~Dv~nav~~G~D~imLs~E-ta~G~y----P~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~ 384 (505)
+...-..+.+|||-|=+.+| |.-|.- |+..-+-+.++. ...+.+......|.+. |+.--.+.+.
T Consensus 52 l~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~----------pvI~~l~~~~~vpISI-DT~~~~Va~a 120 (314)
T 3tr9_A 52 LRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLL----------PVIDAIKKRFPQLISV-DTSRPRVMRE 120 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHH----------HHHHHHHHHCCSEEEE-ECSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHH----------HHHHHHHhhCCCeEEE-eCCCHHHHHH
Q ss_pred HHhcCCcEEEEEcCCc----hHHHHHHhhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCCCCCCCC
Q 010627 385 ANSARATLILVLTRGG----STAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASD 460 (505)
Q Consensus 385 a~~~~a~~Ivv~T~sG----~ta~~ls~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~ 460 (505)
|-+.+|+ ++-+-|| ..+..+++|. +|++.+ +.. ..+.+..+..-| .+
T Consensus 121 Al~aGa~--iINDVsg~~~~~m~~v~a~~g--~~vVlM-----h~~------G~P~tmq~~~~y-dv------------- 171 (314)
T 3tr9_A 121 AVNTGAD--MINDQRALQLDDALTTVSALK--TPVCLM-----HFP------SETRKPGSTTHF-YF------------- 171 (314)
T ss_dssp HHHHTCC--EEEETTTTCSTTHHHHHHHHT--CCEEEE-----CCC------CTTCCTTSSCHH-HH-------------
T ss_pred HHHcCCC--EEEECCCCCchHHHHHHHHhC--CeEEEE-----CCC------CCCccccccccc-ch-------------
Q ss_pred ccCHHHHHHHHHHHHHHcCCCCCCCEEE
Q 010627 461 AETTEEALEFAIELGKKKGLCKKGDSVV 488 (505)
Q Consensus 461 ~~~~e~~i~~al~~~~~~g~~~~GD~VV 488 (505)
.++.-..++..++.+.+.| +.+.+.++
T Consensus 172 v~ev~~~l~~~i~~a~~~G-I~~~~Iil 198 (314)
T 3tr9_A 172 LQSVKKELQESIQRCKKAG-ISEDRIII 198 (314)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCGGGEEE
T ss_pred HHHHHHHHHHHHHHHHHcC-CCHhHEEE
No 451
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=26.14 E-value=3.4e+02 Score=25.11 Aligned_cols=51 Identities=14% Similarity=0.210 Sum_probs=38.6
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHH
Q 010627 275 QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQ 345 (505)
Q Consensus 275 qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~ 345 (505)
-...++.|+++|++|.+=|- - +..++..++..|+|+|+- .||....+.+.+
T Consensus 185 ~~~~v~~~~~~G~~v~~WTV----------n---~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 185 HPDWVKDCKVLGMTSNVWTV----------D---DPKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp STTHHHHHHHTTCEEEEECC----------C---SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEECC----------C---CHHHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 35789999999999998761 1 234556677789999986 689888877653
No 452
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=26.14 E-value=4.6e+02 Score=25.49 Aligned_cols=110 Identities=12% Similarity=0.027 Sum_probs=58.2
Q ss_pred cHHHHHhcccccCC-CEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe--cCHHHHhcHHHHHhc-CCeeEEecCcccC
Q 010627 189 DKEDILKWGIPNQI-DMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV--ENQEGVANFDDILAN-SDAFMVARGDLGM 264 (505)
Q Consensus 189 D~~di~~~al~~g~-d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--Et~~av~nldeI~~~-sDgImIaRgDLg~ 264 (505)
+.+.. ..+.+.|. .++...++ +++.+.+.-+.+.+.-. ..+.+.+ -++.--+.++...+. .|+|.++-|.
T Consensus 25 ~~~la-~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~-~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~--- 98 (332)
T 2z6i_A 25 DGDLA-GAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTD-KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN--- 98 (332)
T ss_dssp CHHHH-HHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCC-SCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC---
T ss_pred cHHHH-HHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC---
Confidence 34455 66677776 55655554 56655443333332211 1222322 133211223333333 6999987542
Q ss_pred cCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecc
Q 010627 265 EIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 328 (505)
Q Consensus 265 e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~ 328 (505)
|. .+++.+++.|.|++.-. .+.. +...+...|+|++.+++
T Consensus 99 --p~--------~~i~~l~~~g~~v~~~v-----------~~~~---~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 99 --PS--------KYMERFHEAGIIVIPVV-----------PSVA---LAKRMEKIGADAVIAEG 138 (332)
T ss_dssp --GG--------GTHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred --hH--------HHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 22 35666777899988532 2222 33456678999999965
No 453
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=26.11 E-value=6.7 Score=40.43 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=0.0
Q ss_pred CCCCCCCCcccccCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCC-----CCHHHHHHHHHHHHHHHHHcCCeeE
Q 010627 1 MDANCGVSTAIEKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSH-----GSHEYHQETLNNLRTAMVNTGILCA 75 (505)
Q Consensus 1 ~~~~~~~~~~~~~~r~tkIi~TiGp~~~~~~~i~~li~~G~~~~RlN~sh-----g~~~~~~~~i~~ir~~~~~~~~~v~ 75 (505)
.|.|+|++.. .-.-.|+|-+++ | .|+.+++.|.. =+=+|| | .+....+---.+..++.++ ||.
T Consensus 18 vD~NVPl~~g-~Itdd~RI~aal-p------TI~~ll~~gak--vil~SHlGRPkg-~~~~~SL~pva~~L~~lLg-~V~ 85 (390)
T 1v6s_A 18 VDYNVPVQDG-KVQDETRILESL-P------TLRHLLAGGAS--LVLLSHLGRPKG-PDPKYSLAPVGEALRAHLP-EAR 85 (390)
T ss_dssp CCCCCCEETT-EESCCHHHHHHH-H------HHHHHHHTTCE--EEEECCCSCCSS-CCGGGCSHHHHHHHHHHCT-TEE
T ss_pred ecCCCcccCC-ccCChHHHHHHH-H------HHHHHHHCCCE--EEEECCCCCCCC-CCCCcCHHHHHHHHHHHhC-Cce
Q ss_pred EEEecCC-CeeEEeecCCCCcEEecCCCEEEEEecCCCCCCccEEEecchhhhcccCCCCEEEEeCC
Q 010627 76 VMLDTKG-PEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDG 141 (505)
Q Consensus 76 i~~Dl~G-pkiR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG 141 (505)
..-|.-| |+.+ -.+.. |+.|+.+.|-.-.-..+.+. |.++|.+.+..--.||++|.
T Consensus 86 f~~d~~G~~~~~-~~v~~-----l~~G~VlLLEN~RF~~~E~~----nd~~fa~~LA~l~DvyVNDA 142 (390)
T 1v6s_A 86 FAPFPPGSEEAR-REAEA-----LRPGEVLLLENVRFEPGEEK----NDPELSARYARLGEAFVLDA 142 (390)
T ss_dssp ECCSCTTSHHHH-HHHHT-----CCTTCEEECSCGGGSTTTTT----TCHHHHHHHGGGCSEEEECC
T ss_pred eccccCCcHHHH-HHHhc-----CCCCeEEEEccccccccccc----CCHHHHHHHHhhCCEEEEcC
No 454
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=26.08 E-value=3e+02 Score=25.98 Aligned_cols=124 Identities=14% Similarity=0.105 Sum_probs=67.5
Q ss_pred cCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCC---CCCCHHHHHHHHHHHHHHHhcccCchhhHH
Q 010627 285 QGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETA---AGAYPEVAVRTMAQICVEAESTLDYGDVFK 361 (505)
Q Consensus 285 ~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta---~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~ 361 (505)
.|.++-++|-+ ..-..+.|+..-+..+..|+.+|+|.|=+----. .|+|. ...+-+..+.+.+.... -+-.++
T Consensus 60 ~~~~v~v~tVi--gFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~-~v~~ei~~v~~a~~~~~-lKvIiE 135 (231)
T 3ndo_A 60 APSGLAIAAVA--GFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLD-AVSADITAVRKAVRAAT-LKVIVE 135 (231)
T ss_dssp CCTTCEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHTTTSE-EEEECC
T ss_pred cCCCCeEEEEe--cCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHH-HHHHHHHHHHHHccCCc-eEEEEE
Confidence 45556555543 3335556777888999999999999985421111 14443 55566666666654311 011111
Q ss_pred hhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchH------H---HHH-HhhCCCCcEEEE
Q 010627 362 RVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGST------A---KLV-AKYRPGMPILSV 418 (505)
Q Consensus 362 ~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t------a---~~l-s~~RP~~pIiav 418 (505)
.- ... .+ ..+.--..++++|.+.+|+. +=|.||.+ . +++ ....+++||-|-
T Consensus 136 t~-~L~-~~--~t~eei~~a~~ia~~aGADf--VKTSTGf~~~~gAt~edv~lm~~~v~~~v~VKaa 196 (231)
T 3ndo_A 136 SA-ALL-EF--SGEPLLADVCRVARDAGADF--VKTSTGFHPSGGASVQAVEIMARTVGERLGVKAS 196 (231)
T ss_dssp HH-HHH-HH--TCHHHHHHHHHHHHHTTCSE--EECCCSCCTTCSCCHHHHHHHHHHHTTTSEEEEE
T ss_pred Cc-ccC-CC--CCHHHHHHHHHHHHHHCcCE--EEcCCCCCCCCCCCHHHHHHHHHHhCCCceEEEe
Confidence 00 000 00 02334556788999999994 45555543 1 222 223467777776
No 455
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=26.05 E-value=2.5e+02 Score=31.20 Aligned_cols=102 Identities=15% Similarity=0.122 Sum_probs=70.4
Q ss_pred ChhcHHHHHhcccccCCCEEEE-------------------cCCCCh--hHHHHHHHHHhccCCCceEEEEecCHHHHh-
Q 010627 186 TEKDKEDILKWGIPNQIDMIAL-------------------SFVRKG--SDLVGVRKLLGGHAKNILLMSKVENQEGVA- 243 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~-------------------sfV~sa--~dv~~v~~~l~~~~~~~~IiakIEt~~av~- 243 (505)
++.-++-| +||.++|.++|.+ +|++-- -|+.+|.+|.+++ .+.||.-.|+..++.
T Consensus 370 te~~K~YI-DFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 370 TANVKRYI-DFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRN 446 (738)
T ss_dssp HHHHHHHH-HHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhh
Confidence 45557778 9999999999999 221111 2499999999875 488999999987444
Q ss_pred ---cHHHHHhc-----CCeeEEec-CcccCcCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 010627 244 ---NFDDILAN-----SDAFMVAR-GDLGMEIPI----EKIFLAQKVMIYKCNIQGKPVVT 291 (505)
Q Consensus 244 ---nldeI~~~-----sDgImIaR-gDLg~e~~~----~~v~~~qk~Ii~~~~~~gkpvi~ 291 (505)
++|+.++. ..||-++= ||. .+-+- +.+-....++++.|.+++.-|..
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 45556553 36777741 111 11111 45777888999999999988775
No 456
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=25.96 E-value=4.6e+02 Score=25.43 Aligned_cols=89 Identities=13% Similarity=0.128 Sum_probs=53.6
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHH-HHHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~-nav~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.++ -..||++.|- ..+-+|..+.+ .|-..|+|++|+..
T Consensus 43 v~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 43 SDGLCIL-ANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTTS---------HYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp CSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 6999994 3222 23444554444455554442 2478887542 34455665544 46778999999964
Q ss_pred cCCCC----CCHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAG----AYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G----~yP~~~V~~m~~i~~~aE~ 352 (505)
.-.+ --+-+.++....|+.++.-
T Consensus 112 -Pyy~~~~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 112 -PYHGATFRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp -SCBTTTBCCCHHHHHHHHHHHHHHCSS
T ss_pred -CCCccCCCCCHHHHHHHHHHHHHhcCC
Confidence 2221 1257888888888887753
No 457
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=25.86 E-value=4.7e+02 Score=25.53 Aligned_cols=134 Identities=17% Similarity=0.150 Sum_probs=0.0
Q ss_pred cHHHHHhcccccCCCEEEEcCCC--------ChhHHHHHHHHHhccCCCceEEEEecCHHH------------HhcHHHH
Q 010627 189 DKEDILKWGIPNQIDMIALSFVR--------KGSDLVGVRKLLGGHAKNILLMSKVENQEG------------VANFDDI 248 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV~--------sa~dv~~v~~~l~~~~~~~~IiakIEt~~a------------v~nldeI 248 (505)
+.+++ ..|.+.|+|.|=+- -. |...++.++++. ++.|.++|.-..| .+.++..
T Consensus 48 s~~~a-~~A~~gGAdRIELc-~~l~~GGlTPS~g~i~~a~~~~-----~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 48 SVESA-VNAERGGADRIELC-SGLSEGGTTPSMGVLQVVKQSV-----QIPVFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp SHHHH-HHHHHHTCSEEEEC-BCGGGTCBCCCHHHHHHHHTTC-----CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred CHHHH-HHHHHhCCCEEEEC-CCCCCCCCCCCHHHHHHHHHhc-----CCCeEEEEecCCCCcccCHHHHHHHHHHHHHH
Q ss_pred Hhc-CCeeEEecCcccCc--CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH------HHHHHHHHHHc
Q 010627 249 LAN-SDAFMVARGDLGME--IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRA------EATDVANAVLD 319 (505)
Q Consensus 249 ~~~-sDgImIaRgDLg~e--~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptra------Ev~Dv~nav~~ 319 (505)
.++ +|||.+ |=|..+ +..+.+..+.+ .+.+.++-+ .|| -..-+...+..
T Consensus 121 ~~~GAdGvVf--G~L~~dg~iD~~~~~~Li~------~a~~l~vTF--------------HRAFD~~~d~~~Ale~Li~l 178 (287)
T 3iwp_A 121 KLYGADGLVF--GALTEDGHIDKELCMSLMA------ICRPLPVTF--------------HRAFDMVHDPMAALETLLTL 178 (287)
T ss_dssp HHTTCSEEEE--CCBCTTSCBCHHHHHHHHH------HHTTSCEEE--------------CGGGGGCSCHHHHHHHHHHH
T ss_pred HHcCCCEEEE--eeeCCCCCcCHHHHHHHHH------HcCCCcEEE--------------ECchhccCCHHHHHHHHHHc
Q ss_pred CCceeeecccCCCCCCHHHHHHHHHHHHHHHhccc
Q 010627 320 GTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTL 354 (505)
Q Consensus 320 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~ 354 (505)
|+|-|+.||--..- .+-+..+++++..+...+
T Consensus 179 GvdrILTSG~~~~a---~~Gl~~Lk~Lv~~a~~rI 210 (287)
T 3iwp_A 179 GFERVLTSGCDSSA---LEGLPLIKRLIEQAKGRI 210 (287)
T ss_dssp TCSEEEECTTSSST---TTTHHHHHHHHHHHTTSS
T ss_pred CCCEEECCCCCCCh---HHhHHHHHHHHHHhCCCC
No 458
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=25.57 E-value=1.6e+02 Score=27.87 Aligned_cols=44 Identities=16% Similarity=0.134 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCcEEEEecCC---------CCHHHHHHHHHHHHHHHHHcCCe
Q 010627 30 VPMIEKLLKAGMNVARFNFSH---------GSHEYHQETLNNLRTAMVNTGIL 73 (505)
Q Consensus 30 ~~~i~~li~~G~~~~RlN~sh---------g~~~~~~~~i~~ir~~~~~~~~~ 73 (505)
.+.+++++++|++++-|---+ .+.++..+..+.+++..++++.|
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~ 98 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGAL 98 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCE
Confidence 688999999999999998777 45778888899999998888866
No 459
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=25.38 E-value=4.8e+02 Score=25.39 Aligned_cols=131 Identities=18% Similarity=0.159 Sum_probs=73.6
Q ss_pred CCCChhcHHHHHhcccccCCCEEEEcCC-------------CChhHHH-HHHHHHhccCCCceEEEEecC-------HHH
Q 010627 183 PTLTEKDKEDILKWGIPNQIDMIALSFV-------------RKGSDLV-GVRKLLGGHAKNILLMSKVEN-------QEG 241 (505)
Q Consensus 183 ~~lte~D~~di~~~al~~g~d~V~~sfV-------------~sa~dv~-~v~~~l~~~~~~~~IiakIEt-------~~a 241 (505)
.-+|-+|.--- +.+-+.|+|.|.+..- -+.+++. ..+...+ ......|++=.+- .++
T Consensus 37 ~~~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r-~~~~~~vvaD~pfgsy~~s~~~a 114 (281)
T 1oy0_A 37 AMLTAYDYSTA-RIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVR-GAPHALVVADLPFGSYEAGPTAA 114 (281)
T ss_dssp EEEECCSHHHH-HHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHH-HCTTSEEEEECCTTSSTTCHHHH
T ss_pred EEEeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh-cCCCCeEEEECCCCcccCCHHHH
Confidence 34567777777 7788899999977520 1233433 3443332 2345667776652 457
Q ss_pred HhcHHHHHhc--CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeE----Eehhh---hHhhhcCCCCCh-HH-H
Q 010627 242 VANFDDILAN--SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVV----TATQM---LESMIKSPRPTR-AE-A 310 (505)
Q Consensus 242 v~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi----~ATqm---LeSM~~~~~ptr-aE-v 310 (505)
++|.-.+++. +++|-+--|+ .+...|+++.++|.||+ +--|- +.-.....+..+ .| +
T Consensus 115 ~~na~rl~~eaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i 182 (281)
T 1oy0_A 115 LAAATRFLKDGGAHAVKLEGGE------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTI 182 (281)
T ss_dssp HHHHHHHHHTTCCSEEEEEBSG------------GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCcH------------HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHH
Confidence 7888888873 5898885442 23455666678899986 11111 111111111111 12 2
Q ss_pred HHHHHHHHcCCceeeec
Q 010627 311 TDVANAVLDGTDCVMLS 327 (505)
Q Consensus 311 ~Dv~nav~~G~D~imLs 327 (505)
.|.......|+|+++|=
T Consensus 183 ~rA~a~~eAGA~~ivlE 199 (281)
T 1oy0_A 183 ADAIAVAEAGAFAVVME 199 (281)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCcEEEEe
Confidence 45555677899999994
No 460
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=25.25 E-value=1.9e+02 Score=27.28 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010627 377 LASSAVRTANSARATLILVLTRG---------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 377 ia~~av~~a~~~~a~~Ivv~T~s---------G~ta~~ls~~RP~~pIiav 418 (505)
.+...++.|.+.++++||+-++. |+++..+.+.-| |||+.+
T Consensus 99 ~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 148 (319)
T 3olq_A 99 PYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP-APVWMV 148 (319)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC-CCEEEe
Confidence 45566677778899999997763 778888887765 999998
No 461
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=25.25 E-value=91 Score=32.34 Aligned_cols=53 Identities=21% Similarity=0.219 Sum_probs=32.7
Q ss_pred CCCHHHH-HHHHHhCCcEEEEecCCCCH--------HHHHHHHHHHHHHHHHcCCeeEEEEecC
Q 010627 27 SRSVPMI-EKLLKAGMNVARFNFSHGSH--------EYHQETLNNLRTAMVNTGILCAVMLDTK 81 (505)
Q Consensus 27 ~~~~~~i-~~li~~G~~~~RlN~shg~~--------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 81 (505)
....+.+ +.|-+.|+|++|+-++.... +...+.++.+=+.+++.| +.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~G--i~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERG--YKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence 4567888 89999999999998762211 222233333333345666 44788854
No 462
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=25.24 E-value=4.7e+02 Score=25.22 Aligned_cols=147 Identities=17% Similarity=0.155 Sum_probs=75.6
Q ss_pred CCeeEEecCc-ccC-cCCch-----hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHH-HHHHHHHHcCCce
Q 010627 252 SDAFMVARGD-LGM-EIPIE-----KIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEA-TDVANAVLDGTDC 323 (505)
Q Consensus 252 sDgImIaRgD-Lg~-e~~~~-----~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv-~Dv~nav~~G~D~ 323 (505)
.|.|++ || |++ .+|.+ .+.......-..++....|.+++= +.-|... +..+. .-+...+.-|+++
T Consensus 38 ~d~ilv--Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD--~pfgsy~---~~~~a~~~a~rl~kaGa~a 110 (264)
T 1m3u_A 38 LNVMLV--GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLAD--LPFMAYA---TPEQAFENAATVMRAGANM 110 (264)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEE--CCTTSSS---SHHHHHHHHHHHHHTTCSE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEE--CCCCCcC---CHHHHHHHHHHHHHcCCCE
Confidence 599999 54 553 35654 234444444455566666665542 2222222 33333 3344566789999
Q ss_pred eeecccCCCCCCHHHHHHHHHHHHHHHhcccC---c----hhhHHhhhhCCCCCCCchhhHHHHHHHHH---HhcCCcEE
Q 010627 324 VMLSGETAAGAYPEVAVRTMAQICVEAESTLD---Y----GDVFKRVMQHSPVPMSPLESLASSAVRTA---NSARATLI 393 (505)
Q Consensus 324 imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~---~----~~~~~~~~~~~~~~~~~~~~ia~~av~~a---~~~~a~~I 393 (505)
+-|=+- . +.+..++.+. +.-+. | .+....+.... -.-..++-+..+++-| .+.+|.+|
T Consensus 111 VklEgg----~---e~~~~I~al~---~agipV~gHiGLtPq~v~~~ggf~--v~grt~~~a~~~i~rA~a~~eAGA~~i 178 (264)
T 1m3u_A 111 VKIEGG----E---WLVETVQMLT---ERAVPVCGHLGLTPQSVNIFGGYK--VQGRGDEAGDQLLSDALALEAAGAQLL 178 (264)
T ss_dssp EECCCS----G---GGHHHHHHHH---HTTCCEEEEEESCGGGHHHHTSSC--CCCCSHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEECCc----H---HHHHHHHHHH---HCCCCeEeeecCCceeecccCCeE--EEeCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 998432 1 3334443333 32211 0 01111110010 0112233334443333 45799999
Q ss_pred EEEcCCchHHHHHHhhCCCCcEEEE
Q 010627 394 LVLTRGGSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 394 vv~T~sG~ta~~ls~~RP~~pIiav 418 (505)
++--..-..++.+++--+ +|+|.+
T Consensus 179 vlE~vp~~~a~~it~~l~-iP~igI 202 (264)
T 1m3u_A 179 VLECVPVELAKRITEALA-IPVIGI 202 (264)
T ss_dssp EEESCCHHHHHHHHHHCS-SCEEEE
T ss_pred EEecCCHHHHHHHHHhCC-CCEEEe
Confidence 998776677888887664 999998
No 463
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=25.07 E-value=1.1e+02 Score=32.81 Aligned_cols=44 Identities=9% Similarity=0.156 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCe
Q 010627 30 VPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGIL 73 (505)
Q Consensus 30 ~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~ 73 (505)
.+.+++++++|++.+-|-.-+.+.++..+.++.+|+..++++.|
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~ 71 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVP 71 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCE
Confidence 48899999999999999999999999999999999999988866
No 464
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=24.99 E-value=2.7e+02 Score=26.22 Aligned_cols=132 Identities=11% Similarity=0.068 Sum_probs=66.7
Q ss_pred hcHHHHHhcccccCCCEEEEcCCC------ChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhcCCeeEEecCc
Q 010627 188 KDKEDILKWGIPNQIDMIALSFVR------KGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILANSDAFMVARGD 261 (505)
Q Consensus 188 ~D~~di~~~al~~g~d~V~~sfV~------sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~sDgImIaRgD 261 (505)
.+..+..+.+.+.|+|+|=+.+-. +..++.++++.+.+.|-.+..+. . .++
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~---~--------------------~~~ 92 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVE---Y--------------------ITQ 92 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEE---C--------------------BCC
T ss_pred CCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeeh---h--------------------hhc
Confidence 344444488899999999887521 23456667777766543322221 1 122
Q ss_pred ccCc--CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHH
Q 010627 262 LGME--IPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVA 339 (505)
Q Consensus 262 Lg~e--~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~ 339 (505)
+... -..+. ....++.++.|.+.|.+.++..-. .+.+ .+...+..+.+.+-+-++.|.=|+-.+.+ +.+
T Consensus 93 ~~~~~~~~~~~-~~~~~~~i~~A~~lGa~~v~~g~~------~~~~-~~~~~~~l~~l~~~a~Gv~l~lE~~~~~~-~~~ 163 (296)
T 2g0w_A 93 WGTAEDRTAEQ-QKKEQTTFHMARLFGVKHINCGLL------EKIP-EEQIIVALGELCDRAEELIIGLEFMPYSG-VAD 163 (296)
T ss_dssp CSSTTTCCHHH-HHHHHHHHHHHHHHTCCEEEECCC------SCCC-HHHHHHHHHHHHHHHTTSEEEEECCTTSS-SCS
T ss_pred cccCChHHHHH-HHHHHHHHHHHHHcCCCEEEEcCC------CCCC-HHHHHHHHHHHHHHhcCCEEEEEecCCCC-CCC
Confidence 2110 01111 233467888888889887753211 1112 33333333322221144666667654433 344
Q ss_pred HHHHHHHHHHHh
Q 010627 340 VRTMAQICVEAE 351 (505)
Q Consensus 340 V~~m~~i~~~aE 351 (505)
.+.+.+++++..
T Consensus 164 ~~~~~~l~~~v~ 175 (296)
T 2g0w_A 164 LQAAWRVAEACG 175 (296)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 555555666554
No 465
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=24.88 E-value=1.4e+02 Score=27.67 Aligned_cols=84 Identities=15% Similarity=0.046 Sum_probs=49.8
Q ss_pred hcccccCCCEEEEcCCC-----ChhHHHHHHHHHhccCCCceEEEE--ecCHHHHhcHHHHHhc-CCeeEEecCcccCcC
Q 010627 195 KWGIPNQIDMIALSFVR-----KGSDLVGVRKLLGGHAKNILLMSK--VENQEGVANFDDILAN-SDAFMVARGDLGMEI 266 (505)
Q Consensus 195 ~~al~~g~d~V~~sfV~-----sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-sDgImIaRgDLg~e~ 266 (505)
+.+.+.|++.|.+.-+. +.-+...++++.... +++++|- |-++ +++.++.+. +||+++|++=+..+.
T Consensus 158 ~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~--~ipvia~GGI~~~---~d~~~~~~~Gadgv~vGsal~~~~~ 232 (253)
T 1thf_D 158 VEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKM---EHFLEAFLAGADAALAASVFHFREI 232 (253)
T ss_dssp HHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGC--CSCEEEESCCCSH---HHHHHHHHTTCSEEEESHHHHTTCS
T ss_pred HHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhc--CCCEEEECCCCCH---HHHHHHHHcCChHHHHHHHHHcCCC
Confidence 66778899988875332 122455555544322 5667762 3333 445555555 799999987665544
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeE
Q 010627 267 PIEKIFLAQKVMIYKCNIQGKPVV 290 (505)
Q Consensus 267 ~~~~v~~~qk~Ii~~~~~~gkpvi 290 (505)
.+ ++..+.+++.|.|+=
T Consensus 233 ~~-------~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 233 DV-------RELKEYLKKHGVNVR 249 (253)
T ss_dssp CH-------HHHHHHHHHTTCCCC
T ss_pred CH-------HHHHHHHHHcCCccc
Confidence 42 233445677787763
No 466
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=24.83 E-value=80 Score=30.95 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=59.3
Q ss_pred hcccccCCCEEEEcC----------------CCChhHHHHHHHHHhccCCCceEEEEec----CHHHHhcHHHHHhc-CC
Q 010627 195 KWGIPNQIDMIALSF----------------VRKGSDLVGVRKLLGGHAKNILLMSKVE----NQEGVANFDDILAN-SD 253 (505)
Q Consensus 195 ~~al~~g~d~V~~sf----------------V~sa~dv~~v~~~l~~~~~~~~IiakIE----t~~av~nldeI~~~-sD 253 (505)
+.+.+. +|+|-+.+ .++++-+.++-+.+.+.- ..+|..||= ..+.++-+..+.+. .|
T Consensus 78 ~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~~l~~~G~d 155 (318)
T 1vhn_A 78 RILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYRILVEEGVD 155 (318)
T ss_dssp HHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHHHHHHTTCC
T ss_pred HHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHHHHHHhCCC
Confidence 666667 88776643 234444555544444321 368999962 22233223333333 58
Q ss_pred eeEEe-cCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHH-cCCceeeec
Q 010627 254 AFMVA-RGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLS 327 (505)
Q Consensus 254 gImIa-RgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~-~G~D~imLs 327 (505)
+|.|- |..+..--+...+ ..+...++ +.||+....+ -| ..|+..++. .|+|+||+.
T Consensus 156 ~i~v~g~~~~~~~~~~~~~-----~~i~~i~~-~ipVi~~GgI---------~s---~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 156 EVFIHTRTVVQSFTGRAEW-----KALSVLEK-RIPTFVSGDI---------FT---PEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp EEEEESSCTTTTTSSCCCG-----GGGGGSCC-SSCEEEESSC---------CS---HHHHHHHHHHHCCSEEEES
T ss_pred EEEEcCCCccccCCCCcCH-----HHHHHHHc-CCeEEEECCc---------CC---HHHHHHHHHcCCCCEEEEC
Confidence 88884 3222211121122 12222333 8999876543 22 345666776 599999995
No 467
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=24.81 E-value=3.4e+02 Score=26.19 Aligned_cols=119 Identities=16% Similarity=0.137 Sum_probs=66.4
Q ss_pred CCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccC-C--CCCCHHHHHHHHHHHHHHHhcccCchhhHHh
Q 010627 286 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGET-A--AGAYPEVAVRTMAQICVEAESTLDYGDVFKR 362 (505)
Q Consensus 286 gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Et-a--~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~ 362 (505)
|.++-++|-+ +.-..+.|+..-+..+..|+.+|+|.|=+---- + .|+|. ...+-+..+.+.+.... -+-.++.
T Consensus 92 gs~v~v~tVi--gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~-~v~~eI~~v~~a~~~~~-lKVIlEt 167 (260)
T 3r12_A 92 GTDVKVVTVV--GFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWE-YVYEDIRSVVESVKGKV-VKVIIET 167 (260)
T ss_dssp TSCCEEEEEE--STTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHTTTSE-EEEECCG
T ss_pred CCCCeEEEEe--cCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHH-HHHHHHHHHHHhcCCCc-EEEEEeC
Confidence 4455555533 333455677788899999999999998542111 1 13433 45555666655544211 1111110
Q ss_pred hhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchH--------HH-HHHhhCCCCcEEEE
Q 010627 363 VMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGST--------AK-LVAKYRPGMPILSV 418 (505)
Q Consensus 363 ~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t--------a~-~ls~~RP~~pIiav 418 (505)
...+. +. -..|+++|...+|+ ++=|.||.. .+ +.....+++||-|-
T Consensus 168 ------~~Lt~-ee-i~~A~~ia~eaGAD--fVKTSTGf~~~GAT~edV~lm~~~vg~~v~VKaA 222 (260)
T 3r12_A 168 ------CYLDT-EE-KIAACVISKLAGAH--FVKTSTGFGTGGATAEDVHLMKWIVGDEMGVKAS 222 (260)
T ss_dssp ------GGCCH-HH-HHHHHHHHHHTTCS--EEECCCSSSSCCCCHHHHHHHHHHHCTTSEEEEE
T ss_pred ------CCCCH-HH-HHHHHHHHHHhCcC--EEEcCCCCCCCCCCHHHHHHHHHHhCCCceEEEe
Confidence 01122 33 46678999999999 556666632 22 22234677888886
No 468
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=24.79 E-value=1.2e+02 Score=30.92 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=37.8
Q ss_pred HHHHHhcccccCCCEEEEcCC---------CChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHh----cCCeeE
Q 010627 190 KEDILKWGIPNQIDMIALSFV---------RKGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILA----NSDAFM 256 (505)
Q Consensus 190 ~~di~~~al~~g~d~V~~sfV---------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~----~sDgIm 256 (505)
.++. +.+.+.|+|+|.++-- .+.+-+.++++.+ +.++.||+- -||.+-.++++ -+|+++
T Consensus 263 ~e~A-~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av---~~~ipVia~----GGI~~g~Dv~kalalGAd~V~ 334 (392)
T 2nzl_A 263 GDDA-REAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV---EGKVEVFLD----GGVRKGTDVLKALALGAKAVF 334 (392)
T ss_dssp HHHH-HHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHH---TTSSEEEEC----SSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHH-HHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHc---CCCCEEEEE----CCCCCHHHHHHHHHhCCCeeE
Confidence 3455 6778999999999632 1223334444443 345777772 24444444444 379999
Q ss_pred EecC
Q 010627 257 VARG 260 (505)
Q Consensus 257 IaRg 260 (505)
|||.
T Consensus 335 iGr~ 338 (392)
T 2nzl_A 335 VGRP 338 (392)
T ss_dssp ECHH
T ss_pred ECHH
Confidence 9983
No 469
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=24.78 E-value=1.5e+02 Score=27.84 Aligned_cols=86 Identities=8% Similarity=-0.012 Sum_probs=52.9
Q ss_pred CCCeEEEEec-----CCCCCC-HHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCee-EEEEecCCCeeE
Q 010627 14 KPKTKIVCTL-----GPASRS-VPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILC-AVMLDTKGPEIR 86 (505)
Q Consensus 14 ~r~tkIi~Ti-----Gp~~~~-~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v-~i~~Dl~GpkiR 86 (505)
...+|||++- .|+..+ .+.+++|.+.|+|+.+|-.---+.++..++++..+++......|+ ++-+ |+.=|
T Consensus 123 ~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~M---G~~G~ 199 (238)
T 1sfl_A 123 QYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISM---SKLGL 199 (238)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEEC---TGGGH
T ss_pred hcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEEC---CCCch
Confidence 3579999986 243111 233556777999999999777778888888888777744456673 4433 44333
Q ss_pred EeecCCCCcEEecCCCEEEEE
Q 010627 87 TGFLKDGKPIQLKQGQEITIS 107 (505)
Q Consensus 87 ~g~~~~~~~i~l~~G~~v~l~ 107 (505)
+.++-+ -.-|..+++.
T Consensus 200 ~SRi~~-----~~~GS~~tf~ 215 (238)
T 1sfl_A 200 ISRTAQ-----GVFGGALTYG 215 (238)
T ss_dssp HHHHTG-----GGGTBCEEEE
T ss_pred HHHHHH-----HHhCCCeeec
Confidence 333332 1345555554
No 470
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=24.75 E-value=69 Score=31.12 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=27.8
Q ss_pred EecCCCCCCHHHHHHHHHhC--CcEEEEecCCCCHH
Q 010627 21 CTLGPASRSVPMIEKLLKAG--MNVARFNFSHGSHE 54 (505)
Q Consensus 21 ~TiGp~~~~~~~i~~li~~G--~~~~RlN~shg~~~ 54 (505)
.|.-|..-+++.++.|.++| ++-+-+.+-+++.+
T Consensus 92 ~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~ 127 (304)
T 2qgq_A 92 MYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDK 127 (304)
T ss_dssp CCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHH
T ss_pred eeeecccCCHHHHHHHHhCCCCccEEEEecccCCHH
Confidence 46778888999999999999 77777777787754
No 471
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=24.73 E-value=1.6e+02 Score=29.01 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=47.7
Q ss_pred CCCceEEEEecCH------HHHhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhh
Q 010627 227 AKNILLMSKVENQ------EGVANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESM 299 (505)
Q Consensus 227 ~~~~~IiakIEt~------~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM 299 (505)
+.+..|+|+.|.. +++++.....++ +|+|++-- ++ . ...+-+.|++..+|++. +|++-
T Consensus 157 ~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~------~~--~----~~~~~~i~~~~~~P~~~--n~~~~- 221 (305)
T 3ih1_A 157 APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEA------LQ--S----EEEFRLFNSKVNAPLLA--NMTEF- 221 (305)
T ss_dssp CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETT------CC--S----HHHHHHHHHHSCSCBEE--ECCTT-
T ss_pred CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcC------CC--C----HHHHHHHHHHcCCCEEE--eecCC-
Confidence 4567899999876 566666666655 79999831 11 1 13344556667889864 23321
Q ss_pred hcCCCCChHHHHHHHHHHHcCCceeee
Q 010627 300 IKSPRPTRAEATDVANAVLDGTDCVML 326 (505)
Q Consensus 300 ~~~~~ptraEv~Dv~nav~~G~D~imL 326 (505)
-..|.+|.+|..+ .|+.-+..
T Consensus 222 g~tp~~~~~eL~~------lGv~~v~~ 242 (305)
T 3ih1_A 222 GKTPYYSAEEFAN------MGFQMVIY 242 (305)
T ss_dssp SSSCCCCHHHHHH------TTCSEEEE
T ss_pred CCCCCCCHHHHHH------cCCCEEEE
Confidence 1235666665543 48877765
No 472
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=24.68 E-value=2.5e+02 Score=30.76 Aligned_cols=132 Identities=13% Similarity=0.155 Sum_probs=65.1
Q ss_pred CCChhcHHHHH-------hcccccCCCEEEEc-------------CCCChhH------------HHHHHHHHhc-cCCCc
Q 010627 184 TLTEKDKEDIL-------KWGIPNQIDMIALS-------------FVRKGSD------------LVGVRKLLGG-HAKNI 230 (505)
Q Consensus 184 ~lte~D~~di~-------~~al~~g~d~V~~s-------------fV~sa~d------------v~~v~~~l~~-~~~~~ 230 (505)
.||..|.+.+. +.+.+.|+|+|=+. ..+...| +.++.+.+++ .+.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 45666555442 56778999998773 3433222 2333222222 25677
Q ss_pred eEEEEec------------CHHHHhcHHHHHhcCCeeEEecCcc---cC-cCCchhHH-HHHHHHHHHHH-HcCCCeEEe
Q 010627 231 LLMSKVE------------NQEGVANFDDILANSDAFMVARGDL---GM-EIPIEKIF-LAQKVMIYKCN-IQGKPVVTA 292 (505)
Q Consensus 231 ~IiakIE------------t~~av~nldeI~~~sDgImIaRgDL---g~-e~~~~~v~-~~qk~Ii~~~~-~~gkpvi~A 292 (505)
.|..||- ..++++-...+-+..|.+-+.-|.+ .. ..+....+ ..+-..++..+ ..+.|+|.+
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 8888882 1233332222222357776665532 11 11110000 01122333333 358898865
Q ss_pred hhhhHhhhcCCCCChHHHHHHHHHHHcC-Cceeeec
Q 010627 293 TQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 327 (505)
Q Consensus 293 TqmLeSM~~~~~ptraEv~Dv~nav~~G-~D~imLs 327 (505)
..+ -|.. +...++..| +|+|++.
T Consensus 298 G~i---------~~~~---~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 GRY---------TDPE---KMIEIVTKGYADIIGCA 321 (729)
T ss_dssp SCC---------CCHH---HHHHHHHTTSCSBEEES
T ss_pred CCC---------CCHH---HHHHHHHCCCCCEEEeC
Confidence 432 2333 335567777 9999995
No 473
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=24.64 E-value=1.7e+02 Score=27.86 Aligned_cols=65 Identities=14% Similarity=0.120 Sum_probs=44.9
Q ss_pred CCCeEEEEec-----CCCCCC-HHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCe-eEEEE
Q 010627 14 KPKTKIVCTL-----GPASRS-VPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGIL-CAVML 78 (505)
Q Consensus 14 ~r~tkIi~Ti-----Gp~~~~-~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~-v~i~~ 78 (505)
...+|||++- .|+..+ .+.+++|.+.|+|+.+|-.---+.++..++++..+++......| +++-+
T Consensus 137 ~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~M 208 (257)
T 2yr1_A 137 ECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAM 208 (257)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred hCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEEC
Confidence 4579999986 243111 23356677899999999977777888888888877774445566 34444
No 474
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=24.56 E-value=1.2e+02 Score=30.16 Aligned_cols=41 Identities=10% Similarity=0.235 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHhCC---------------------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q 010627 28 RSVPMIEKLLKAGM---------------------NVARFNFSHGSHEYHQETLNNLRTAMVN 69 (505)
Q Consensus 28 ~~~~~i~~li~~G~---------------------~~~RlN~shg~~~~~~~~i~~ir~~~~~ 69 (505)
...+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 378 ~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 378 STLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp CHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHH
Confidence 44566667777775 468999999 999999999999987654
No 475
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=24.55 E-value=92 Score=30.63 Aligned_cols=54 Identities=17% Similarity=0.104 Sum_probs=35.6
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCCCH-----HHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 27 SRSVPMIEKLL-KAGMNVARFNFSHGSH-----EYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 27 ~~~~~~i~~li-~~G~~~~RlN~shg~~-----~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
..+.+.++.|. +.|+|++|+-+.+... ++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGI--YVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTC--EEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 34678899986 5899999997765321 2234455555556667774 47788754
No 476
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=24.53 E-value=3.7e+02 Score=25.81 Aligned_cols=116 Identities=14% Similarity=0.212 Sum_probs=66.5
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhcccCc
Q 010627 277 VMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDY 356 (505)
Q Consensus 277 ~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 356 (505)
-+..+|+..|.++.+- .|.......+...-..|++-+....+. .| .++.+...+++++-...+ +
T Consensus 81 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~-~ 144 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLT-----------MPETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQRYF-V 144 (313)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEE-C
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCEE-e
Confidence 3667888999998763 122222234455556799987775431 12 356665555543321101 1
Q ss_pred hhhHHhhhhCCCCCCCchh--h-HHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010627 357 GDVFKRVMQHSPVPMSPLE--S-LASSAVRTANSA--RATLILVLTRGGSTAKLVAK----YRPGMPILSV 418 (505)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~--~-ia~~av~~a~~~--~a~~Ivv~T~sG~ta~~ls~----~RP~~pIiav 418 (505)
..-| .++.. . ....+.++..++ +.+.||+.+-+|.++--+++ ..|...|+++
T Consensus 145 ~~~~----------~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 205 (313)
T 2q3b_A 145 PQQF----------ENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAV 205 (313)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCC----------CChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEE
Confidence 0000 12211 1 222356666666 37899999999999766554 4699999999
No 477
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=24.52 E-value=1e+02 Score=30.80 Aligned_cols=72 Identities=15% Similarity=0.047 Sum_probs=42.0
Q ss_pred ChhcHHHHHhcccccCCCEEEEcC---CC----------ChhHHHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc-
Q 010627 186 TEKDKEDILKWGIPNQIDMIALSF---VR----------KGSDLVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN- 251 (505)
Q Consensus 186 te~D~~di~~~al~~g~d~V~~sf---V~----------sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~- 251 (505)
+..|...+.+...+.|+|+|.++- -. ..+-+.++++.+ ++.|++- ......++.+++++.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~-Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAV-GLITTPEQAETLLQAG 310 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEEC-SSCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEEE-CCCCCHHHHHHHHHCC
Confidence 444544443666678999999983 10 112344455443 3556552 222223456677764
Q ss_pred -CCeeEEecCccc
Q 010627 252 -SDAFMVARGDLG 263 (505)
Q Consensus 252 -sDgImIaRgDLg 263 (505)
+|+|++||+=|+
T Consensus 311 ~aD~V~iGR~~la 323 (349)
T 3hgj_A 311 SADLVLLGRVLLR 323 (349)
T ss_dssp SCSEEEESTHHHH
T ss_pred CceEEEecHHHHh
Confidence 799999998654
No 478
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=24.47 E-value=1.5e+02 Score=27.15 Aligned_cols=54 Identities=22% Similarity=0.228 Sum_probs=37.2
Q ss_pred EEEecch-hhhcccCCCCEEEEeCCeEEEEEEEEeeeCCeEEEEEeeC-------ceecCCCCcccC
Q 010627 118 MICMSYK-KLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENS-------AMLGERKNVNLP 176 (505)
Q Consensus 118 ~i~v~~~-~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~~~v~~g-------G~l~s~Kgvnlp 176 (505)
.+.+..+ .+++.++.||.|-+|. ++|.|.+ .+++.+.+.+ .. |.++....||+-
T Consensus 23 ~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~--~~~~~f~vdv-~ETl~~T~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 23 RHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVR--ILGDMVYFDI-DQALGTTTFDGLKEGDQVNLE 84 (186)
T ss_dssp EEEEECCTTTGGGCCTTCEEEETT--EEEEEEE--EETTEEEEEE-CTTTTTSSGGGCCTTCEEEEE
T ss_pred EEEEEeChHHhccCCCCCeEEEee--EEEEEEE--EcCCEEEEEh-HHhhhhCchhhcCCCCEEEEC
Confidence 4455443 4788999999999983 6799995 5788888887 22 344445555553
No 479
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=24.47 E-value=69 Score=32.81 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhCCcEEEEecCC-------CCH--HHHHHHHHHHHHHHHHcCCeeEEEEecC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSH-------GSH--EYHQETLNNLRTAMVNTGILCAVMLDTK 81 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~sh-------g~~--~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 81 (505)
+.+.++.|-++|+|++||-+++ +.+ ....+.++++=+.+.+.| +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G--l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 5788999999999999998752 211 012345555555556677 55888873
No 480
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=24.35 E-value=2.8e+02 Score=27.84 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=41.8
Q ss_pred CCeEEEEecCCCCCCHHH----HHHHHHh-CCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 15 PKTKIVCTLGPASRSVPM----IEKLLKA-GMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 15 r~tkIi~TiGp~~~~~~~----i~~li~~-G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
.+...-+|+|- .+++. .+++++. |.+.+.+.....+.++-.+.++.+|++ .|.-+.+++|.
T Consensus 155 ~~v~~y~s~g~--~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a---~G~~~~l~vDa 220 (383)
T 3toy_A 155 RPIPAYDSYGV--LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRAL---LGPDIALMLDF 220 (383)
T ss_dssp CCEEEEEECSS--CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHH---HCTTSEEEEEC
T ss_pred CceEEeEecCC--CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHH---hCCCCeEEEeC
Confidence 34566677664 44544 4557778 999999999887888877888888876 33334455554
No 481
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=24.27 E-value=97 Score=30.74 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHhCC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q 010627 28 RSVPMIEKLLKAGM-------------NVARFNFSHGSHEYHQETLNNLRTAMVN 69 (505)
Q Consensus 28 ~~~~~i~~li~~G~-------------~~~RlN~shg~~~~~~~~i~~ir~~~~~ 69 (505)
...+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.++
T Consensus 382 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 382 DSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 44667777888875 6799999988999999999999987653
No 482
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=24.17 E-value=87 Score=27.45 Aligned_cols=58 Identities=22% Similarity=0.312 Sum_probs=38.5
Q ss_pred EecCCCEEEEEec----CCCCCCccEEEecchhhhc---ccCCCCEEEEeCCeEEEEEEEEeeeCCeEE
Q 010627 97 QLKQGQEITISTD----YTIKGDENMICMSYKKLAV---DVQPGSVILCSDGTISFTVLECNVKAGLVK 158 (505)
Q Consensus 97 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~---~v~~Gd~I~idDG~i~l~V~~v~~~~~~i~ 158 (505)
-++.|++.+++.. +...+......++-..|.. .+++|+.+.+.+ ...+|++ +.++.+.
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~--v~~~~v~ 128 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITE--VTDNEVT 128 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEE--EETTEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEE--EcCCEEE
Confidence 4678888888765 2233334444566566654 589999999887 6667774 4777665
No 483
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=24.11 E-value=1.2e+02 Score=30.56 Aligned_cols=62 Identities=15% Similarity=0.160 Sum_probs=42.0
Q ss_pred CeEEEEecCCCCC-CHH----HHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 16 KTKIVCTLGPASR-SVP----MIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 16 ~tkIi~TiGp~~~-~~~----~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
+....+|+|-... +++ ..+++.++|.+.+.+...|++.+...+.++.+|++. |.-+.|++|.
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G~d~~l~vDa 227 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---GDEFPLMVDA 227 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---CCCCeEEEEC
Confidence 4455666644322 454 456678899999999999888888888888888863 3223345554
No 484
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=24.05 E-value=1.1e+02 Score=30.71 Aligned_cols=59 Identities=10% Similarity=0.015 Sum_probs=37.6
Q ss_pred CeEEEEecCCCCCCH----HHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEec
Q 010627 16 KTKIVCTLGPASRSV----PMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTGILCAVMLDT 80 (505)
Q Consensus 16 ~tkIi~TiGp~~~~~----~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 80 (505)
+...-+|+|- .++ +..+++.++|.+.+.+++.| +.+.-.++++.+|++ .+.-+.|++|.
T Consensus 134 ~v~~~~~~~~--~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g~d~~l~vDa 196 (379)
T 2rdx_A 134 GAPMYRVAPQ--RSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPL---LEPGEKAMADA 196 (379)
T ss_dssp SEEBCEECCC--SCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGG---SCTTCEEEEEC
T ss_pred ceeEEEEecC--CCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHh---cCCCCEEEEEC
Confidence 4455567763 233 34566789999999999998 566666677777664 33233355554
No 485
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=24.01 E-value=1.4e+02 Score=29.22 Aligned_cols=44 Identities=18% Similarity=0.167 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Q 010627 28 RSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTG 71 (505)
Q Consensus 28 ~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~ 71 (505)
.+.+.+++.+++|.+-.-+..||-..|++.+.-+.+-+.+...|
T Consensus 91 ~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~g 134 (288)
T 3q94_A 91 SSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARN 134 (288)
T ss_dssp CSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 37999999999999999999999999997777777666666665
No 486
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=23.97 E-value=4.2e+02 Score=24.23 Aligned_cols=99 Identities=19% Similarity=0.159 Sum_probs=51.6
Q ss_pred CceEEEEec-CH---HH-HhcHHHHHhc-CCeeEEecCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcC
Q 010627 229 NILLMSKVE-NQ---EG-VANFDDILAN-SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKS 302 (505)
Q Consensus 229 ~~~IiakIE-t~---~a-v~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~ 302 (505)
++.|..+.- ++ .+ .+.++..++. +|++.++ |+.. ++ -+++++.|+++|..++++- +
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~g~~~~~~i--------~ 141 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREEGIKTVFLA--------A 141 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHHTCEEEEEE--------C
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHhCCCeEEEE--------C
Confidence 456777763 33 11 2334444444 7999994 5543 33 3567889999998887632 1
Q ss_pred CCCChHHHHHHHHHHHcCCceeeecccC--CCCC---CHHHHHHHHHHHHHH
Q 010627 303 PRPTRAEATDVANAVLDGTDCVMLSGET--AAGA---YPEVAVRTMAQICVE 349 (505)
Q Consensus 303 ~~ptraEv~Dv~nav~~G~D~imLs~Et--a~G~---yP~~~V~~m~~i~~~ 349 (505)
|. |..|. ..++..++|+++....+ ..|. ++....+.++++...
T Consensus 142 ~~-t~~e~---~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~ 189 (248)
T 1geq_A 142 PN-TPDER---LKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI 189 (248)
T ss_dssp TT-CCHHH---HHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHH
T ss_pred CC-CHHHH---HHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh
Confidence 21 22332 44555567744322111 1122 555666676666543
No 487
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=23.96 E-value=84 Score=31.21 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=35.4
Q ss_pred CCHHHHHHHH-HhCCcEEEEecCCCC-----HHHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 28 RSVPMIEKLL-KAGMNVARFNFSHGS-----HEYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 28 ~~~~~i~~li-~~G~~~~RlN~shg~-----~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
.+.+.++.|. +.|+|++|+-++.+. .++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 54 ~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi--~VIld~H~ 112 (364)
T 1g01_A 54 VNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHDM--YVIVDWHV 112 (364)
T ss_dssp CSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTTC--EEEEEEEC
T ss_pred cCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 4678899997 899999999877421 12233455555555566774 47888875
No 488
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=23.80 E-value=3.1e+02 Score=25.06 Aligned_cols=31 Identities=35% Similarity=0.548 Sum_probs=25.0
Q ss_pred hcCCcEEEEEcCC----------chHHHHHHhhCCCCcEEEE
Q 010627 387 SARATLILVLTRG----------GSTAKLVAKYRPGMPILSV 418 (505)
Q Consensus 387 ~~~a~~Ivv~T~s----------G~ta~~ls~~RP~~pIiav 418 (505)
+.+++.||+-++. |+++..+.+.-| |||+.+
T Consensus 107 ~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~-~PVlvv 147 (268)
T 3ab8_A 107 ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASP-VPVLLA 147 (268)
T ss_dssp HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCS-SCEEEE
T ss_pred ccCCCEEEEeccCCCccccccccchhHHHHHHhCC-CCEEEE
Confidence 7789999998762 567888888765 999988
No 489
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=23.73 E-value=96 Score=31.63 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhCCcEEEEecCC-------CCH---HHHHHHHHHHHHHHHHcCCeeEEEEecCC
Q 010627 29 SVPMIEKLLKAGMNVARFNFSH-------GSH---EYHQETLNNLRTAMVNTGILCAVMLDTKG 82 (505)
Q Consensus 29 ~~~~i~~li~~G~~~~RlN~sh-------g~~---~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 82 (505)
+.+.++.|-++|+|++||-++. |++ +...+.++.+=+.+++.| +.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G--i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS--LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT--CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 4788999999999999997641 211 113445555555556677 458888863
No 490
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=23.69 E-value=3e+02 Score=22.38 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=37.1
Q ss_pred CCCeeEEeecCCCCcEEec-CCCEEEEEecCCCCCCccEEEecchhhh-cccCCCCEEEE
Q 010627 81 KGPEIRTGFLKDGKPIQLK-QGQEITISTDYTIKGDENMICMSYKKLA-VDVQPGSVILC 138 (505)
Q Consensus 81 ~GpkiR~g~~~~~~~i~l~-~G~~v~l~~~~~~~~~~~~i~v~~~~~~-~~v~~Gd~I~i 138 (505)
.|..+|+|-+-...++.-. .|..++|...+. ......++|.|..++ +..+.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~-~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDK-DNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECS-SCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcC-CCCCcEEEEEECCCCCccccCCCeEEE
Confidence 6889999865332345444 477888875321 122467999998766 55678887766
No 491
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=23.61 E-value=1.5e+02 Score=27.69 Aligned_cols=49 Identities=16% Similarity=0.320 Sum_probs=36.8
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHHHHHcCCceeeecccCCCCCCHHHHHHHH
Q 010627 275 QKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTM 343 (505)
Q Consensus 275 qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m 343 (505)
....++.++++|++|.+=| + + +-.++..++..|+|+|+- .||..+.+.+
T Consensus 200 ~~~~v~~~~~~G~~v~~wT--v----n-------~~~~~~~l~~~GvdgIiT-------D~P~~~~~~l 248 (252)
T 2pz0_A 200 IPELVEGCKKNGVKLFPWT--V----D-------RKEDMERMIKAGVDGIIT-------DDPETLINLV 248 (252)
T ss_dssp CHHHHHHHHHTTCEECCBC--C----C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEC--C----C-------CHHHHHHHHHcCCCEEEc-------CCHHHHHHHH
Confidence 3678999999999998876 1 1 123556677789999876 6898777665
No 492
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=23.58 E-value=4.7e+02 Score=24.63 Aligned_cols=115 Identities=22% Similarity=0.209 Sum_probs=74.7
Q ss_pred HHHcCCCeEEehhhhHhhhcCCC-----CChHHH----HHHHHHHHcCCceeeecccCCCCCCHHHHHHHHHHHHHHHhc
Q 010627 282 CNIQGKPVVTATQMLESMIKSPR-----PTRAEA----TDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAES 352 (505)
Q Consensus 282 ~~~~gkpvi~ATqmLeSM~~~~~-----ptraEv----~Dv~nav~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 352 (505)
|+....||.+ |+. |+ -+..|+ .|+..+...|+|++++..=|..|.--.++.+.|-..+...+
T Consensus 50 ~~~~~ipV~v-------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~- 120 (224)
T 2bdq_A 50 LHEKGISVAV-------MIR-PRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLP- 120 (224)
T ss_dssp HHHTTCEEEE-------ECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCC-
T ss_pred hhhcCCceEE-------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCe-
Confidence 7788999987 554 32 355566 68899999999999999999999988888777765544322
Q ss_pred ccCchhhHHhhhhCCCCCCCchhhHHHHHHHHHHhcCCcEEEEEcCCchH-----------HHHHHhhCCCCcEEEE
Q 010627 353 TLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGST-----------AKLVAKYRPGMPILSV 418 (505)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t-----------a~~ls~~RP~~pIiav 418 (505)
..+..-|+. .+ ..++. .+.+...+++.+-|+ |..|.. .+++.+..++.-|++.
T Consensus 121 -vTFHRAFD~----~~-~~d~~-----~ale~L~~lGv~rIL--TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~G 184 (224)
T 2bdq_A 121 -LVFHMAFDV----IP-KSDQK-----KSIDQLVALGFTRIL--LHGSSNGEPIIENIKHIKALVEYANNRIEIMVG 184 (224)
T ss_dssp -EEECGGGGG----SC-TTTHH-----HHHHHHHHTTCCEEE--ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEEC
T ss_pred -EEEECchhc----cC-CcCHH-----HHHHHHHHcCCCEEE--CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeC
Confidence 222334432 21 11232 345666678999776 443322 2456666777778775
No 493
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=23.52 E-value=50 Score=31.32 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=39.9
Q ss_pred cccccCCCEEEEcCCCChhH--------HHHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc----CCeeEEecC
Q 010627 196 WGIPNQIDMIALSFVRKGSD--------LVGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN----SDAFMVARG 260 (505)
Q Consensus 196 ~al~~g~d~V~~sfV~sa~d--------v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~----sDgImIaRg 260 (505)
.|.+.|++|| .|||..-+| ++++.++++..+.++.|++ .+++|..+|.++ +|.+-+.+.
T Consensus 120 ~Aa~AGa~yI-SPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip~~ 190 (223)
T 3s1x_A 120 LAAKAGVTYV-SPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVPFN 190 (223)
T ss_dssp HHHHTTCSEE-EEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHcCCeEE-EeecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeCHH
Confidence 4677899987 489976544 5666666766677777777 457777777652 466666543
No 494
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.51 E-value=2.7e+02 Score=22.59 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=36.6
Q ss_pred HHHHHHhcCCcEEEEEcC----CchH-HHHHHhhCCCCcEEEEeecccccCCCCcCCCChhhhhccccccccEEEEeCC
Q 010627 381 AVRTANSARATLILVLTR----GGST-AKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAG 454 (505)
Q Consensus 381 av~~a~~~~a~~Ivv~T~----sG~t-a~~ls~~RP~~pIiav~~p~~~~t~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 454 (505)
+.+...+...+.|++-.. +|.. .+.+.+..|.+|||.+ |. ........-.+..|+.-++...
T Consensus 53 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~-------s~-----~~~~~~~~~~~~~g~~~~l~Kp 119 (152)
T 3eul_A 53 ALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLI-------SA-----HDEPAIVYQALQQGAAGFLLKD 119 (152)
T ss_dssp HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEE-------ES-----CCCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEE-------Ec-----cCCHHHHHHHHHcCCCEEEecC
Confidence 344445557787777433 4433 4466677899999999 41 2222223334456888877764
No 495
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=23.45 E-value=83 Score=29.13 Aligned_cols=70 Identities=7% Similarity=0.037 Sum_probs=44.2
Q ss_pred cHHHHHhcccccCCCEEEEcCC-CChhHH--HHHHHHHhccCCCceEEEEecCHHHHhcHHHHHhc--CCeeEEecCc
Q 010627 189 DKEDILKWGIPNQIDMIALSFV-RKGSDL--VGVRKLLGGHAKNILLMSKVENQEGVANFDDILAN--SDAFMVARGD 261 (505)
Q Consensus 189 D~~di~~~al~~g~d~V~~sfV-~sa~dv--~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--sDgImIaRgD 261 (505)
+.+|+ +.+.++|+|++.+-|. .|+..| .+++++.......+..+.-.-++ ..+.+.+|++. .|.+=+- ||
T Consensus 10 ~~eda-~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH-G~ 84 (203)
T 1v5x_A 10 RLEDA-LLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH-GE 84 (203)
T ss_dssp CHHHH-HHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC-SC
T ss_pred cHHHH-HHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC-CC
Confidence 56688 8889999999999975 455544 55555544433445544444343 35566667665 4888875 44
No 496
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=23.30 E-value=5.2e+02 Score=25.19 Aligned_cols=90 Identities=11% Similarity=0.119 Sum_probs=53.3
Q ss_pred CCeeEEecCccc--CcCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHHHHHHHH-HHHcCCceeeecc
Q 010627 252 SDAFMVARGDLG--MEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 328 (505)
Q Consensus 252 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~~~~~gkpvi~ATqmLeSM~~~~~ptraEv~Dv~n-av~~G~D~imLs~ 328 (505)
.||+++. |--| ..+..++-..+.+..++.+ .-..|||..|- ..+-+|..+.+. |-..|+|++|+..
T Consensus 46 v~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~-~grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 46 LTGLVIL-GTNAEAFLLTREERAQLIATARKAV-GPDFPIMAGVG---------AHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp CSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHH-CTTSCEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-ccccChhhCCHHHHHHHHHHHHHHh-CCCCcEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 6999985 3332 2344455444445555444 22468887542 345566666554 6667999999954
Q ss_pred cCCCCC--CHHHHHHHHHHHHHHHhc
Q 010627 329 ETAAGA--YPEVAVRTMAQICVEAES 352 (505)
Q Consensus 329 Eta~G~--yP~~~V~~m~~i~~~aE~ 352 (505)
=--..+ -+-+.++....|+.++.-
T Consensus 115 P~y~~kp~~~~~l~~~f~~ia~a~~l 140 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDDVSCQSPL 140 (318)
T ss_dssp CCC---CCCHHHHHHHHHHHHHHCSS
T ss_pred CcccCCCCCHHHHHHHHHHHHhhCCC
Confidence 322232 246778888888887653
No 497
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=23.26 E-value=1.5e+02 Score=29.66 Aligned_cols=44 Identities=7% Similarity=0.114 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Q 010627 28 RSVPMIEKLLKAGMNVARFNFSHGSHEYHQETLNNLRTAMVNTG 71 (505)
Q Consensus 28 ~~~~~i~~li~~G~~~~RlN~shg~~~~~~~~i~~ir~~~~~~~ 71 (505)
.+.+.+++.+++|.+-.-+..||-+.|++.+.-+.+-+.+...|
T Consensus 86 ~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~g 129 (323)
T 2isw_A 86 DTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARS 129 (323)
T ss_dssp CSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999997777777777666665
No 498
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=23.26 E-value=2.5e+02 Score=26.97 Aligned_cols=22 Identities=14% Similarity=0.027 Sum_probs=12.7
Q ss_pred HHHHHHHHcCCCCCCCEEEEEeec
Q 010627 470 FAIELGKKKGLCKKGDSVVALHRV 493 (505)
Q Consensus 470 ~al~~~~~~g~~~~GD~VVvv~g~ 493 (505)
.+.+...+.+. .-|.|++-.|.
T Consensus 154 ~~~Ei~~q~~~--~~d~vvvpvG~ 175 (303)
T 2v03_A 154 TGPEIWQQTGG--RITHFVSSMGT 175 (303)
T ss_dssp HHHHHHHHTTT--CCCEEEEECSS
T ss_pred cHHHHHHHhCC--CCCEEEEEeCc
Confidence 34455555432 34888887765
No 499
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=23.12 E-value=74 Score=31.47 Aligned_cols=58 Identities=9% Similarity=0.105 Sum_probs=46.2
Q ss_pred hhcHHHHHhcccccCCCEEEEcCCCChhHHHHHHHHHhccCCCceEEEEe---cCHHHHhcH
Q 010627 187 EKDKEDILKWGIPNQIDMIALSFVRKGSDLVGVRKLLGGHAKNILLMSKV---ENQEGVANF 245 (505)
Q Consensus 187 e~D~~di~~~al~~g~d~V~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---Et~~av~nl 245 (505)
+.|.+.+ +.=+++|+||++--++-+++...+..+.+++.|-+++|++=| -|...+..+
T Consensus 163 ~~d~~~L-k~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 163 QADLLNL-KRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp HHHHHHH-HHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred HHHHHHH-HHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 3577777 777889999999999999999999999998888788888765 444444444
No 500
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=23.10 E-value=96 Score=27.67 Aligned_cols=55 Identities=9% Similarity=0.067 Sum_probs=39.6
Q ss_pred HHHHhcHHHHHhc---CCeeEE--ecCcc----cCcCCchhHHHHHHHHHHHHHHcCCCeEEeh
Q 010627 239 QEGVANFDDILAN---SDAFMV--ARGDL----GMEIPIEKIFLAQKVMIYKCNIQGKPVVTAT 293 (505)
Q Consensus 239 ~~av~nldeI~~~---sDgImI--aRgDL----g~e~~~~~v~~~qk~Ii~~~~~~gkpvi~AT 293 (505)
...+.+++.+++. .|.|+| |-.|+ ....+.+.+..-.+.+++.++++|.++++.|
T Consensus 57 ~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 57 RWALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 3455566666653 575554 66688 4566778888888999999999998888755
Done!