Query 010629
Match_columns 505
No_of_seqs 47 out of 49
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 10:53:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010629.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010629hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kb0a2 b.70.1.1 (A:1-573) Qui 68.5 22 0.0016 35.0 12.8 78 337-428 77-156 (573)
2 d2dg1a1 b.68.6.1 (A:6-324) Lac 68.1 3.3 0.00024 37.7 5.8 47 408-455 246-295 (319)
3 d1flga_ b.70.1.1 (A:) Ethanol 65.6 52 0.0038 32.3 14.9 87 338-440 69-163 (582)
4 d1w6sa_ b.70.1.1 (A:) Methanol 63.5 45 0.0033 33.1 14.1 126 317-467 159-343 (596)
5 d2ad6a1 b.70.1.1 (A:1-571) Met 55.2 63 0.0046 31.7 13.3 87 337-440 62-160 (571)
6 d1pbyb_ b.69.2.2 (B:) Quinohem 52.6 16 0.0012 30.5 7.1 56 403-460 2-61 (337)
7 d1dava_ a.139.1.1 (A:) Cellulo 51.7 1.9 0.00014 32.5 0.7 19 230-248 2-20 (71)
8 d1tyea_ b.69.8.1 (A:) Integrin 51.3 22 0.0016 33.9 8.9 40 413-452 267-309 (452)
9 d1tyea_ b.69.8.1 (A:) Integrin 51.2 3.8 0.00027 39.7 3.0 18 437-454 423-440 (452)
10 d2ghsa1 b.68.6.1 (A:20-314) Re 50.3 19 0.0014 32.2 7.6 53 399-454 207-260 (295)
11 d1q7fa_ b.68.9.1 (A:) Brain tu 49.8 50 0.0037 28.4 10.4 62 403-467 212-278 (279)
12 d1kv9a2 b.70.1.1 (A:1-560) Qui 49.6 86 0.0063 30.5 13.2 79 338-430 67-147 (560)
13 d1kv9a2 b.70.1.1 (A:1-560) Qui 48.2 53 0.0039 32.1 11.3 83 344-453 436-520 (560)
14 d1utca2 b.69.6.1 (A:4-330) Cla 47.8 46 0.0034 31.6 10.2 97 344-460 146-282 (327)
15 d1jv2a4 b.69.8.1 (A:1-438) Int 36.5 8.2 0.0006 36.6 2.8 25 437-461 410-436 (438)
16 d1nr0a1 b.69.4.1 (A:2-312) Act 33.2 70 0.0051 27.6 8.5 52 403-457 251-304 (311)
17 d1wp5a_ b.68.10.1 (A:) Topoiso 30.9 88 0.0064 28.6 9.2 64 336-425 106-170 (323)
18 d1suua_ b.68.10.1 (A:) DNA gyr 29.3 62 0.0045 29.3 7.7 95 335-457 106-216 (304)
19 d1l0qa2 b.69.2.3 (A:1-301) Sur 28.0 52 0.0038 26.7 6.3 37 407-447 8-45 (301)
20 d1wp5a_ b.68.10.1 (A:) Topoiso 26.8 80 0.0058 28.9 8.0 17 336-352 50-66 (323)
21 d1kb0a2 b.70.1.1 (A:1-573) Qui 26.7 2.3E+02 0.016 27.3 11.9 82 346-454 457-540 (573)
22 d1ri9a_ b.34.2.1 (A:) Fyn-bind 26.5 39 0.0029 25.9 4.7 40 423-464 34-73 (77)
23 d1jmxb_ b.69.2.2 (B:) Quinohem 26.0 76 0.0055 26.1 7.1 56 403-460 9-67 (346)
24 d1flga_ b.70.1.1 (A:) Ethanol 25.9 72 0.0052 31.2 7.9 74 344-442 464-539 (582)
25 d1jmxb_ b.69.2.2 (B:) Quinohem 25.9 89 0.0065 25.7 7.5 56 400-460 261-318 (346)
26 d2ad6a1 b.70.1.1 (A:1-571) Met 25.1 94 0.0069 30.4 8.7 83 345-454 443-527 (571)
27 d1pbyb_ b.69.2.2 (B:) Quinohem 24.0 82 0.006 25.8 6.9 52 404-460 253-306 (337)
28 d1l0qa2 b.69.2.3 (A:1-301) Sur 20.8 60 0.0044 26.3 5.2 38 204-241 5-43 (301)
No 1
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=68.51 E-value=22 Score=35.03 Aligned_cols=78 Identities=9% Similarity=0.057 Sum_probs=44.0
Q ss_pred ccEEEEec-CceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEEeecceEEE
Q 010629 337 GDVVFLTN-RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVV 415 (505)
Q Consensus 337 ~D~vFL~s-~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~i 415 (505)
.++||+++ +|.|-|++.. .|..+|+.+....-....... . ....-.... .....++++.+..+.-
T Consensus 77 ~g~vyv~t~~~~v~AlDa~----TG~~~W~~~~~~~~~~~~~~~---~-~~~~~g~~~------~~~~v~~~t~~g~l~a 142 (573)
T d1kb0a2 77 DGIMYVSASWSVVHAIDTR----TGNRIWTYDPQIDRSTGFKGC---C-DVVNRGVAL------WKGKVYVGAWDGRLIA 142 (573)
T ss_dssp TTEEEEECGGGCEEEEETT----TTEEEEEECCCCCGGGGGGSS---S-CSCCCCCEE------ETTEEEEECTTSEEEE
T ss_pred CCEEEEECCCCeEEEEeCC----CCCeEEEeCCCCCcccccccc---c-ccccccceE------ECCcEEEEecccceee
Confidence 34566665 6999999985 349999976543322110000 0 000000111 1234566666667777
Q ss_pred ECC-CCCEEEEEeC
Q 010629 416 ISP-GGSILTSIDL 428 (505)
Q Consensus 416 ls~-~G~vl~s~~L 428 (505)
||. +|+++-...+
T Consensus 143 lda~tG~~~W~~~~ 156 (573)
T d1kb0a2 143 LDAATGKEVWHQNT 156 (573)
T ss_dssp EETTTCCEEEEEET
T ss_pred eccccccceecccC
Confidence 885 9999988876
No 2
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=68.09 E-value=3.3 Score=37.65 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=32.7
Q ss_pred eecceEEEECCCCCEEEEEeCCCCCCc---ccEEeecCCCCcccEEEecCC
Q 010629 408 GGDQEAVVISPGGSILTSIDLPAPPTH---ALVCEDFSNDGLTDVILMTSN 455 (505)
Q Consensus 408 ~Ge~~~~ils~~G~vl~s~~Lp~pP~a---p~Iv~DfngDG~nDiIVvT~~ 455 (505)
.|...+.++|++|++|..++||..+.. -+...-|. ++.+++++.|.+
T Consensus 246 ~~~g~V~~~~p~G~~l~~i~~P~~~~~~~~~~~~~~~~-~~~~~~~~t~~~ 295 (319)
T d2dg1a1 246 YGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFI-PGTNQLIICSND 295 (319)
T ss_dssp ETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEEC-TTSCEEEEEEEC
T ss_pred cCCCEEEEECCCCcEEEEEeCCCcCCCcCceeeeEEEe-CCCCEEEEEcCC
Confidence 366889999999999999999985432 23344553 345667776653
No 3
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=65.59 E-value=52 Score=32.30 Aligned_cols=87 Identities=10% Similarity=0.153 Sum_probs=49.4
Q ss_pred cEEEE-ecCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEEeecceEEEE
Q 010629 338 DVVFL-TNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVI 416 (505)
Q Consensus 338 D~vFL-~s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~il 416 (505)
++||+ +.+|.|-|+++. .|..+|+.++...=.. .+.. ..+-..++. ..+..++.+.+..++-|
T Consensus 69 g~vy~~t~~~~v~AlDa~----TG~~lW~~~~~~~~~~--~~~~----~~~~rg~a~------~~~~i~~~t~~~~l~al 132 (582)
T d1flga_ 69 GVIYVTASYSRLFALDAK----TGKRLWTYNHRLPDDI--RPCC----DVVNRGAAI------YGDKVFFGTLDASVVAL 132 (582)
T ss_dssp TEEEEEETTTEEEEEESS----SCCEEEEEECCCCTTC--CCSS----CSCCCCCEE------ETTEEEEEETTTEEEEE
T ss_pred CEEEEeCCCCeEEEEeCC----CCCeEEEEcCCCCCcc--cccc----ccccCCceE------eCCceEEecCCCeEEEe
Confidence 44554 556999999985 3489999765321000 0000 000001111 12456777777778888
Q ss_pred CC-CCCEEEEEeCCCC------CCcccEEee
Q 010629 417 SP-GGSILTSIDLPAP------PTHALVCED 440 (505)
Q Consensus 417 s~-~G~vl~s~~Lp~p------P~ap~Iv~D 440 (505)
|. +|+++-...+..+ -.+|+++.|
T Consensus 133 da~tG~~~W~~~~~~~~~~~~~~~~p~~~~~ 163 (582)
T d1flga_ 133 NKNTGKVVWKKKFADHGAGYTMTGAPTIVKD 163 (582)
T ss_dssp ESSSCCEEEEEECSCGGGTCBCCSCCEEEEC
T ss_pred cccccceeeeecccCCCccceeecCceEecC
Confidence 87 8999988877542 245555554
No 4
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=63.55 E-value=45 Score=33.15 Aligned_cols=126 Identities=15% Similarity=0.177 Sum_probs=0.0
Q ss_pred ccCceEeeCCCCCCCCccccccEEEEecC-------ceEEEecCCCCCCcceeeeeecccc-------------------
Q 010629 317 VATPILIPRSDGHRHRKGSHGDVVFLTNR-------GEVTAYSPGLHGHDAIWQWQLLTDA------------------- 370 (505)
Q Consensus 317 v~~Plii~~~~g~~~r~~~~~D~vFL~s~-------G~vTs~~~~g~g~~~~~~Wq~~T~a------------------- 370 (505)
..+|+++ .|.|++-++ |.|.+||. ..|.++|+..|..
T Consensus 159 t~~P~v~-------------~~~vivg~~~~e~~~~G~v~A~Da----~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g 221 (596)
T d1w6sa_ 159 TIAPYVV-------------KDKVIIGSSGAELGVRGYLTAYDV----KTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (596)
T ss_dssp CSCCEEE-------------TTEEEECCBCGGGTCCCEEEEEET----TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred ccCCcEE-------------CCeEEEeeccccccccCceEEEEC----CCCcEEEEeeccCCcccccccccccccccccc
Q ss_pred -------ccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEEee----------------cceEEEECC-CCCEEEEE
Q 010629 371 -------TWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGG----------------DQEAVVISP-GGSILTSI 426 (505)
Q Consensus 371 -------~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~G----------------e~~~~ils~-~G~vl~s~ 426 (505)
+|....-..|... .-.-+++-+ ...-+.+.+| ..+++-||. +|+++-.+
T Consensus 222 ~~~~~~~tw~g~~~~~gg~~-~W~~~s~D~------~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~ 294 (596)
T d1w6sa_ 222 QKGLGTGTWEGDAWKIGGGT-NWGWYAYDP------GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (596)
T ss_dssp CTTHHHHTSSTTGGGGCCCC-CCSCCEEET------TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred ccccccccCCCCceecCCCc-ccccccccc------CCCeeecccccccccccccccccccccccccccccccccccccc
Q ss_pred eCCC-------CCCcccEEe--ecCCCCcccEEEecCCeEEEEEEeccCC
Q 010629 427 DLPA-------PPTHALVCE--DFSNDGLTDVILMTSNGVYGFVQTRQPG 467 (505)
Q Consensus 427 ~Lp~-------pP~ap~Iv~--DfngDG~nDiIVvT~~Giygfv~~~~~g 467 (505)
..-. .|..|.++. +.+|.+..=++..+++| +-|++.+..|
T Consensus 295 Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G-~~~vlDr~tG 343 (596)
T d1w6sa_ 295 QKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNG-IVYTLDRTDG 343 (596)
T ss_dssp ESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTS-EEEEEETTTC
T ss_pred cceeccccCCccccceeeeeccccccccccceecccccc-ceeeecCCCC
No 5
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=55.20 E-value=63 Score=31.73 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=50.5
Q ss_pred ccEEEEec--CceEEEecCC--CCCCcceeeeeeccc--cccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEEeec
Q 010629 337 GDVVFLTN--RGEVTAYSPG--LHGHDAIWQWQLLTD--ATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGD 410 (505)
Q Consensus 337 ~D~vFL~s--~G~vTs~~~~--g~g~~~~~~Wq~~T~--a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge 410 (505)
.++||+.+ .|.|-+++.. | ..+|+.+.. +.+........ .--.++. ....+++...+
T Consensus 62 ~g~vyv~t~~~~~v~Alda~~tG-----~~~W~~~~~~~~~~~~~~~~~~------~~rg~a~------~~~~i~~~~~~ 124 (571)
T d2ad6a1 62 GDMMYVHSAFPNNTYALNLNDPG-----KIVWQHKPKQDASTKAVMCCDV------VDRGLAY------GAGQIVKKQAN 124 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTT-----SEEEEECCCCCGGGGGGCTTCS------CCCCCEE------ETTEEEEECTT
T ss_pred CCEEEEecCCCCeEEEEeCCCCC-----ceEEEecCCCCcccccccccCc------CCCccee------eCCeEEEEeCC
Confidence 56788765 5899999962 5 899986543 22221100000 0001111 12345666666
Q ss_pred ceEEEECC-CCCEEEEEeCCC-----CCCcccEEee
Q 010629 411 QEAVVISP-GGSILTSIDLPA-----PPTHALVCED 440 (505)
Q Consensus 411 ~~~~ils~-~G~vl~s~~Lp~-----pP~ap~Iv~D 440 (505)
-++.-||. +|+++-...+.. ..+.+|+|.+
T Consensus 125 g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~ 160 (571)
T d2ad6a1 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK 160 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET
T ss_pred CcEEeeehhhhhhhccccccccccccceeecCeEeC
Confidence 77888886 999999888743 4455666654
No 6
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=52.63 E-value=16 Score=30.54 Aligned_cols=56 Identities=14% Similarity=0.142 Sum_probs=39.6
Q ss_pred ceEEEeec-ceEEEECC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEe-cCCe-EEEE
Q 010629 403 QMILAGGD-QEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILM-TSNG-VYGF 460 (505)
Q Consensus 403 ~~IlA~Ge-~~~~ils~-~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVv-T~~G-iygf 460 (505)
+|+++++. ..+.|+|. +++++.+++++.....| .-.-|+.||.. ++|. +.+| |+.|
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~-~~i~~spDg~~-l~v~~~~~~~v~v~ 61 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTP-MVPMVAPGGRI-AYATVNKSESLVKI 61 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCC-CCEEECTTSSE-EEEEETTTTEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCc-cEEEECCCCCE-EEEEECCCCeEEEE
Confidence 56677665 78999997 99999999998765543 23468889853 3333 3455 7777
No 7
>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}
Probab=51.71 E-value=1.9 Score=32.49 Aligned_cols=19 Identities=32% Similarity=0.504 Sum_probs=15.5
Q ss_pred CCCeeeeccCCCceeEEEe
Q 010629 230 EGGLHADINGDGVLDHVQA 248 (505)
Q Consensus 230 ~~~l~aDINgDGVlD~V~a 248 (505)
+..+|.|+|+||.||..-+
T Consensus 2 s~~l~GDvN~DG~Vd~~D~ 20 (71)
T d1dava_ 2 STKLYGDVNDDGKVNSTDA 20 (71)
T ss_dssp CCCCBSCSSSSSBSSGGGH
T ss_pred CCcceeccCCCCCCcHHHH
Confidence 4678999999999987643
No 8
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform IIb [TaxId: 9606]}
Probab=51.31 E-value=22 Score=33.89 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=27.3
Q ss_pred EEEECCCCCEEEEEeCCC---CCCcccEEeecCCCCcccEEEe
Q 010629 413 AVVISPGGSILTSIDLPA---PPTHALVCEDFSNDGLTDVILM 452 (505)
Q Consensus 413 ~~ils~~G~vl~s~~Lp~---pP~ap~Iv~DfngDG~nDiIVv 452 (505)
+.|...++..+.++.-.. .--.-+.+.|||+||..||+|.
T Consensus 267 v~i~~~~~~~~~~~~~~~~g~~fg~sv~~~D~ngDG~~Dl~Vg 309 (452)
T d1tyea_ 267 VEILDSYYQRLHRLRAEQMASYFGHSVAVTDVNGDGRHDLLVG 309 (452)
T ss_dssp EEEECTTCCEEEEEECSSTTSCTTSEEEEECTTSSSSCEEEEE
T ss_pred EEEEecCCceEEEecccccCCceeeEEEEeecCCCCCccEEEe
Confidence 445566777776655432 2223457899999999999885
No 9
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform IIb [TaxId: 9606]}
Probab=51.17 E-value=3.8 Score=39.72 Aligned_cols=18 Identities=22% Similarity=0.373 Sum_probs=15.0
Q ss_pred EEeecCCCCcccEEEecC
Q 010629 437 VCEDFSNDGLTDVILMTS 454 (505)
Q Consensus 437 Iv~DfngDG~nDiIVvT~ 454 (505)
.+.|+|+||..||||-..
T Consensus 423 ~~~D~d~DG~~DlvVGa~ 440 (452)
T d1tyea_ 423 GAVDIDDNGYPDLIVGAY 440 (452)
T ss_dssp EEECSSCSSSCEEEEEEG
T ss_pred eeeeeCCCCCeeEEEEcc
Confidence 467999999999998653
No 10
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=50.25 E-value=19 Score=32.16 Aligned_cols=53 Identities=11% Similarity=0.292 Sum_probs=38.1
Q ss_pred CCccceEEEe-ecceEEEECCCCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecC
Q 010629 399 HDNQQMILAG-GDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTS 454 (505)
Q Consensus 399 ~~~~~~IlA~-Ge~~~~ils~~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~ 454 (505)
+.+.-+.+|. |...+..+|++|+++..++||.+ -|...=|-|...+.|.|.|.
T Consensus 207 D~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~---~~T~~~FGG~d~~~LyvTta 260 (295)
T d2ghsa1 207 DAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGK---QTTCPAFIGPDASRLLVTSA 260 (295)
T ss_dssp CTTSCEEEEEETTTEEEEECTTCCEEEEEECSCS---BEEEEEEESTTSCEEEEEEB
T ss_pred cCCCCEEeeeeCCCceEEecCCCcEeeEecCCCC---ceEEEEEeCCCCCEEEEEEC
Confidence 4444556664 55679999999999999999864 23444466777778877765
No 11
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=49.80 E-value=50 Score=28.36 Aligned_cols=62 Identities=16% Similarity=0.414 Sum_probs=36.4
Q ss_pred ceEEEee-c-ceEEEECCCCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-E--EEEEEeccCC
Q 010629 403 QMILAGG-D-QEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-V--YGFVQTRQPG 467 (505)
Q Consensus 403 ~~IlA~G-e-~~~~ils~~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~~G-i--ygfv~~~~~g 467 (505)
.+++|-. . ..+.+.+++|+.+.++..+.....|. -.-++.||. |+|...+. | |=|+|....|
T Consensus 212 ~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~-~vav~~dG~--l~V~~~n~~v~~fr~~~~~~~~ 278 (279)
T d1q7fa_ 212 EILIADNHNNFNLTIFTQDGQLISALESKVKHAQCF-DVALMDDGS--VVLASKDYRLYIYRYVQLAPVG 278 (279)
T ss_dssp CEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEE-EEEEETTTE--EEEEETTTEEEEEECSCCCCTT
T ss_pred eEEEEECCCCcEEEEECCCCCEEEEEeCCCCCCCEe-EEEEeCCCc--EEEEeCCCeEEEEEeeeecCCC
Confidence 4566642 3 35778899999999987665443332 234667884 55554443 4 4445544333
No 12
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=49.60 E-value=86 Score=30.48 Aligned_cols=79 Identities=10% Similarity=0.109 Sum_probs=45.9
Q ss_pred cEEE-EecCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEEeecceEEEE
Q 010629 338 DVVF-LTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVI 416 (505)
Q Consensus 338 D~vF-L~s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~il 416 (505)
++|| -+.+|.|-|+|.. .|..+|+...+..-....... - ..+-..... .....++...+..+.-|
T Consensus 67 g~vyv~t~~~~v~AlDa~----tG~~lW~~~~~~~~~~~~~~~---~-~~~~~~~~~------~~~~v~~~~~~g~l~Al 132 (560)
T d1kv9a2 67 GVIYTSMSWSRVIAVDAA----SGKELWRYDPEVAKVKARTSC---C-DAVNRGVAL------WGDKVYVGTLDGRLIAL 132 (560)
T ss_dssp TEEEEEEGGGEEEEEETT----TCCEEEEECCCCCGGGGGGCT---T-CSCCCCCEE------EBTEEEEECTTSEEEEE
T ss_pred CEEEEECCCCeEEEEeCC----CCCEEEEECCCCCcccccccc---c-cccccCcce------eCCeEEEEeCCCEEEEE
Confidence 3455 5688999999975 459999965443221110000 0 011111111 12345666667777778
Q ss_pred CC-CCCEEEEEeCCC
Q 010629 417 SP-GGSILTSIDLPA 430 (505)
Q Consensus 417 s~-~G~vl~s~~Lp~ 430 (505)
|. +|+++-...+..
T Consensus 133 da~tG~~~w~~~~~~ 147 (560)
T d1kv9a2 133 DAKTGKAIWSQQTTD 147 (560)
T ss_dssp ETTTCCEEEEEECSC
T ss_pred ECCCCcEEeccCccC
Confidence 86 999999888743
No 13
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=48.19 E-value=53 Score=32.11 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=54.3
Q ss_pred cCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEE-EeecceEEEECC-CCC
Q 010629 344 NRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL-AGGDQEAVVISP-GGS 421 (505)
Q Consensus 344 s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~Il-A~Ge~~~~ils~-~G~ 421 (505)
..|.|+++|..- +..+||...+..+.- | .|+. -+ -+|. ...+..+--+|. +|+
T Consensus 436 ~~G~l~A~D~~t----Gk~~W~~~~~~~~~g-----g---------~l~T-----ag--glVF~G~~dg~l~A~Da~tGe 490 (560)
T d1kv9a2 436 VSGALLAWDPVK----QKAAWKVPYPTHWNG-----G---------TLST-----AG--NLVFQGTAAGQMHAYSADKGE 490 (560)
T ss_dssp CEEEEEEEETTT----TEEEEEEEESSSCCC-----C---------EEEE-----TT--TEEEEECTTSEEEEEETTTCC
T ss_pred cccceEEEeCCC----CeEeeeccCCCCCCC-----c---------eeEE-----CC--CEEEEECCCCcEEEEECCCCc
Confidence 359999999753 499999876654421 1 1111 11 2233 344567788886 999
Q ss_pred EEEEEeCCCCCCcccEEeecCCCCcccEEEec
Q 010629 422 ILTSIDLPAPPTHALVCEDFSNDGLTDVILMT 453 (505)
Q Consensus 422 vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT 453 (505)
+|=+++||+...++||.-..+ |.-=|+|++
T Consensus 491 ~LW~~~l~~~~~~~P~ty~~d--Gkqyv~v~a 520 (560)
T d1kv9a2 491 ALWQFEAQSGIVAAPMTFELA--GRQYVAIMA 520 (560)
T ss_dssp EEEEEECSSCCCSCCEEEEET--TEEEEEEEE
T ss_pred EeEEEECCCCccccCEEEEEC--CEEEEEEEe
Confidence 999999999999999875544 443344444
No 14
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=47.85 E-value=46 Score=31.65 Aligned_cols=97 Identities=22% Similarity=0.343 Sum_probs=64.8
Q ss_pred cCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccC--------------------Cccc
Q 010629 344 NRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVH--------------------DNQQ 403 (505)
Q Consensus 344 s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~--------------------~~~~ 403 (505)
++-+|..|..+- ..+|-+-++.+=.+ .+++-.|+.||...+ ....
T Consensus 146 ~~~QIInY~~d~-----~~kW~~l~GI~~~~----------~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~ 210 (327)
T d1utca2 146 AGCQIINYRTDA-----KQKWLLLTGISAQQ----------NRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEES 210 (327)
T ss_dssp TTCEEEEEEECT-----TSCEEEEEEEEEET----------TEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCE
T ss_pred cCceEEEEEECC-----CCCEEEEEeEecCC----------CceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCc
Confidence 467888887643 77999999987322 346667777776433 2345
Q ss_pred eEEEeecceEEEECCCCCEEEEEeCCCCCCc-cc-----EEeecCCCCccc-------------EEEecCCe-EEEE
Q 010629 404 MILAGGDQEAVVISPGGSILTSIDLPAPPTH-AL-----VCEDFSNDGLTD-------------VILMTSNG-VYGF 460 (505)
Q Consensus 404 ~IlA~Ge~~~~ils~~G~vl~s~~Lp~pP~a-p~-----Iv~DfngDG~nD-------------iIVvT~~G-iygf 460 (505)
-+++-+++ ...|.-|--+|+.++|.. |+ +-.=|..|..|| |-|+|+.| +|-|
T Consensus 211 ~lf~fa~r-----~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~ly 282 (327)
T d1utca2 211 TLFCFAVR-----GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLY 282 (327)
T ss_dssp EEEEEEEE-----ETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred eEEEEEEC-----CCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEE
Confidence 57777766 356777888999887763 33 334567788888 66777777 4444
No 15
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform V [TaxId: 9606]}
Probab=36.51 E-value=8.2 Score=36.61 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=19.4
Q ss_pred EEeecCCCCcccEEEecC--CeEEEEE
Q 010629 437 VCEDFSNDGLTDVILMTS--NGVYGFV 461 (505)
Q Consensus 437 Iv~DfngDG~nDiIVvT~--~Giygfv 461 (505)
++.|||+||..||||-.. +.+|-|.
T Consensus 410 ~~~D~dgDG~~DlvVGa~~~d~~~l~r 436 (438)
T d1jv2a4 410 GATDIDKNGYPDLIVGAFGVDRAILYR 436 (438)
T ss_dssp CCSCCSSSSSCEEEEEETTTTEEEEEE
T ss_pred eeeeeCCCCCccEEEEecCCCcEEEEe
Confidence 467999999999998664 3577664
No 16
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=33.19 E-value=70 Score=27.56 Aligned_cols=52 Identities=8% Similarity=0.107 Sum_probs=38.5
Q ss_pred ceEEEeecc-eEEEECC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCeE
Q 010629 403 QMILAGGDQ-EAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGV 457 (505)
Q Consensus 403 ~~IlA~Ge~-~~~ils~-~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~~Gi 457 (505)
.++++.|.+ .+-|.|. +|+++.+++...+.....+..+++++. |+..+.+|.
T Consensus 251 ~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~---l~s~s~dG~ 304 (311)
T d1nr0a1 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA---LVSISANGF 304 (311)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC---EEEEETTCC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCE---EEEEECCCE
Confidence 566666654 4666685 999999998887766666777788765 788888884
No 17
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.86 E-value=88 Score=28.59 Aligned_cols=64 Identities=20% Similarity=0.276 Sum_probs=41.9
Q ss_pred cccEEEEecCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCc-cceEEEeecceEE
Q 010629 336 HGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDN-QQMILAGGDQEAV 414 (505)
Q Consensus 336 ~~D~vFL~s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~-~~~IlA~Ge~~~~ 414 (505)
...++|+|.+|.+-...-.- |.+.. -.=.+.++.|..+++ ..+.++.++++++
T Consensus 106 ~~~l~~~Tk~G~iKr~~l~~----------------f~~~~----------~~~g~~~i~L~~~D~l~~v~~~~~~~~i~ 159 (323)
T d1wp5a_ 106 NGYFLFVTRNGMVKKTELKH----------------YKAQR----------YSKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGG----------------GCCSC----------CSSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred ceeEEEEeehhheeeccHHH----------------hhhhh----------ccchhhhccccccccccceeccCCCeEEE
Confidence 46899999999998876421 11110 001245666655544 3566778888899
Q ss_pred EECCCCCEEEE
Q 010629 415 VISPGGSILTS 425 (505)
Q Consensus 415 ils~~G~vl~s 425 (505)
|++.+|+.++-
T Consensus 160 l~t~~G~~lrf 170 (323)
T d1wp5a_ 160 LVTHNGYALWF 170 (323)
T ss_dssp EEETTSEEEEE
T ss_pred EEEecceeeEe
Confidence 99999998654
No 18
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=29.34 E-value=62 Score=29.31 Aligned_cols=95 Identities=12% Similarity=0.164 Sum_probs=0.0
Q ss_pred ccccEEEEecCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCcc-ceEEEeecceE
Q 010629 335 SHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQ-QMILAGGDQEA 413 (505)
Q Consensus 335 ~~~D~vFL~s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~-~~IlA~Ge~~~ 413 (505)
...+++|+|.+|.|-.+.-.- .. ...-=.+.+..|..+++. .+.+..+++.+
T Consensus 106 ~~~~l~~~T~~G~iKr~~l~~--------------------------f~-~~~~~~~~a~kL~~~D~lv~v~~~~~~~~v 158 (304)
T d1suua_ 106 DDAYLLLTTASGKIARFESTD--------------------------FK-AVKSRGVIVIKLNDKDFVTSAEIVFKDEKV 158 (304)
T ss_dssp TTCEEEEEETTSEEEEEEGGG--------------------------GC-C----CEECBCCCTTCCEEEEEEECTTCEE
T ss_pred ccceEEEEEehhhhhhcccch--------------------------hh-ccccccceeecccchhhcccccccccccee
Q ss_pred EEECCCCCEEEEEeCCCCCCcccEEeecCCCCccc---------------EEEecCCeE
Q 010629 414 VVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTD---------------VILMTSNGV 457 (505)
Q Consensus 414 ~ils~~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nD---------------iIVvT~~Gi 457 (505)
++++.+|+.+. +.....|...---.-.-+-.+.+ |+++|++|+
T Consensus 159 ~~~t~~G~~lr-f~~~~v~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~ 216 (304)
T d1suua_ 159 ICLSKKGSAFI-FNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGY 216 (304)
T ss_dssp EEEETTSEEEE-EEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSE
T ss_pred Eeeccccceee-eccccccccCccccceeeecccccccceeeeeccCCceEEEEecCCc
No 19
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=28.01 E-value=52 Score=26.74 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=28.3
Q ss_pred EeecceEEEECC-CCCEEEEEeCCCCCCcccEEeecCCCCcc
Q 010629 407 AGGDQEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLT 447 (505)
Q Consensus 407 A~Ge~~~~ils~-~G~vl~s~~Lp~pP~ap~Iv~DfngDG~n 447 (505)
..++..+.|+|+ +|+++.+++++..| .-..|+.||..
T Consensus 8 ~~~~~~v~v~D~~t~~~~~~i~~g~~p----~~va~spdG~~ 45 (301)
T d1l0qa2 8 NSESDNISVIDVTSNKVTATIPVGSNP----MGAVISPDGTK 45 (301)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSSSE----EEEEECTTSSE
T ss_pred ECCCCEEEEEECCCCeEEEEEECCCCc----eEEEEeCCCCE
Confidence 446678999996 99999999998654 34568888843
No 20
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.83 E-value=80 Score=28.90 Aligned_cols=17 Identities=18% Similarity=0.339 Sum_probs=13.9
Q ss_pred cccEEEEecCceEEEec
Q 010629 336 HGDVVFLTNRGEVTAYS 352 (505)
Q Consensus 336 ~~D~vFL~s~G~vTs~~ 352 (505)
+-.++|+||.|.|=++.
T Consensus 50 ~d~ll~fT~~Grvy~l~ 66 (323)
T d1wp5a_ 50 KDVLLLFTNKGNYLYCP 66 (323)
T ss_dssp TSEEEEEETTSEEEEEE
T ss_pred CCEEEEEecCCEEEEEe
Confidence 46789999999987776
No 21
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=26.74 E-value=2.3e+02 Score=27.29 Aligned_cols=82 Identities=18% Similarity=0.222 Sum_probs=53.7
Q ss_pred ceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEE-eecceEEEECC-CCCEE
Q 010629 346 GEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA-GGDQEAVVISP-GGSIL 423 (505)
Q Consensus 346 G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA-~Ge~~~~ils~-~G~vl 423 (505)
|.++++++. .++.+||...+..|.- ++|+. . .-+|++ ..+..+..+|. +|++|
T Consensus 457 G~l~AiD~~----tGk~~W~~~~~~p~~g--------------g~lst-----a--gglVF~G~~dg~l~A~Da~TGe~L 511 (573)
T d1kb0a2 457 GRLLAWDPV----AQKAAWSVEHVSPWNG--------------GTLTT-----A--GNVVFQGTADGRLVAYHAATGEKL 511 (573)
T ss_dssp EEEEEEETT----TTEEEEEEEESSSCCC--------------CEEEE-----T--TTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccEEEeCCC----CCceEeeecCCCCCCC--------------ceEEE-----c--CCEEEEECCCCeEEEEECCCCcEe
Confidence 889999985 3499999877654421 11211 0 123333 34567888886 99999
Q ss_pred EEEeCCCCCCcccEEeecCCCCcccEEEecC
Q 010629 424 TSIDLPAPPTHALVCEDFSNDGLTDVILMTS 454 (505)
Q Consensus 424 ~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~ 454 (505)
-+++||....++||.=-. ||.-=|+|++.
T Consensus 512 W~~~~~~~~~~~P~ty~~--~GkQYv~v~~G 540 (573)
T d1kb0a2 512 WEAPTGTGVVAAPSTYMV--DGRQYVSVAVG 540 (573)
T ss_dssp EEEECSSCCCSCCEEEEE--TTEEEEEEEEC
T ss_pred EEEECCCCccccCEEEEE--CCEEEEEEEeC
Confidence 999999999999974322 45544444443
No 22
>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.48 E-value=39 Score=25.87 Aligned_cols=40 Identities=25% Similarity=0.393 Sum_probs=32.0
Q ss_pred EEEEeCCCCCCcccEEeecCCCCcccEEEecCCeEEEEEEec
Q 010629 423 LTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTR 464 (505)
Q Consensus 423 l~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~~Giygfv~~~ 464 (505)
-....||-.|=--+=|.++|.+|. +|.-...|=||||.+.
T Consensus 34 ~g~~dL~vk~GE~ldVIr~t~~~k--~LcRN~~GkYGYV~~~ 73 (77)
T d1ri9a_ 34 WGTRDLQVKPGESLEVIQTTDDTK--VLCRNEEGKYGYVLRS 73 (77)
T ss_dssp CCTTBCCCCTTCBCEEEEESSSSE--EEEEETTTEEEEEEGG
T ss_pred CCcccCCcCCCCEEEEEEeCCCCe--EEEEcCCCcEEEEEee
Confidence 344578888888888888887655 8888999999999864
No 23
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=26.03 E-value=76 Score=26.15 Aligned_cols=56 Identities=16% Similarity=0.265 Sum_probs=34.8
Q ss_pred ceEEEee-cceEEEECC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-EEEE
Q 010629 403 QMILAGG-DQEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-VYGF 460 (505)
Q Consensus 403 ~~IlA~G-e~~~~ils~-~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~~G-iygf 460 (505)
++++..+ +..+.|+|. +|+++.++++|..- -|--..|+.||..=++..+.+| |+.|
T Consensus 9 ~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~--~p~~l~~spDG~~l~v~~~~~~~v~~~ 67 (346)
T d1jmxb_ 9 EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF--GPGTAMMAPDNRTAYVLNNHYGDIYGI 67 (346)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECSSCC--SSCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCCEEEEEEcCCCC--CcceEEECCCCCEEEEEECCCCcEEEE
Confidence 4444444 478999997 99999999998631 1234566777763222222344 6665
No 24
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.94 E-value=72 Score=31.20 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=48.7
Q ss_pred cCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEEE-eecceEEEECC-CCC
Q 010629 344 NRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA-GGDQEAVVISP-GGS 421 (505)
Q Consensus 344 s~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA-~Ge~~~~ils~-~G~ 421 (505)
..|.|++++..- +..+||...+..+. +| .|+. .+ -+|.+ ..+..+--+|. +|+
T Consensus 464 ~~G~l~AiD~~T----G~i~W~~~~~~p~~-----~g---------~lst-----ag--glVF~Gt~dg~l~A~Da~TGe 518 (582)
T d1flga_ 464 HVGSLRAMDPVS----GKVVWEHKEHLPLW-----AG---------VLAT-----AG--NLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp CSEEEEEECTTT----CCEEEEEEESSCCC-----SC---------CEEE-----TT--TEEEEECTTSEEEEEETTTCC
T ss_pred CCCeEEEEcCCC----CcEEeecCCCCCCc-----cc---------eeEE-----cC--CeEEEeCCCCeEEEEECCCCc
Confidence 469999999753 48999987654321 11 0111 11 12322 23456777886 999
Q ss_pred EEEEEeCCCCCCcccEEeecC
Q 010629 422 ILTSIDLPAPPTHALVCEDFS 442 (505)
Q Consensus 422 vl~s~~Lp~pP~ap~Iv~Dfn 442 (505)
+|=+++||....++||.=..|
T Consensus 519 ~LW~~~~~~~~~~~P~ty~~~ 539 (582)
T d1flga_ 519 ELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp EEEEEECSSCCCSCCEEEEET
T ss_pred EeEEEECCCCccccCEEEEEC
Confidence 999999999999999875443
No 25
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=25.90 E-value=89 Score=25.66 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=40.0
Q ss_pred CccceEEEeecceEEEECC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-EEEE
Q 010629 400 DNQQMILAGGDQEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-VYGF 460 (505)
Q Consensus 400 ~~~~~IlA~Ge~~~~ils~-~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~~G-iygf 460 (505)
....+++.....++.++|. +|+++..++++..|. -.-|+.||. =|.+...+| |..|
T Consensus 261 ~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~----~va~s~DG~-~l~v~~~d~~v~v~ 318 (346)
T d1jmxb_ 261 PKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYY----CVAFDKKGD-KLYLGGTFNDLAVF 318 (346)
T ss_dssp SSCTTEEEEEESEEEEEETTTTEEEEEEECSSCCC----EEEECSSSS-CEEEESBSSEEEEE
T ss_pred CCCCEEEEecCCeEEEEECCCCcEEEEEcCCCCEE----EEEEcCCCC-EEEEEeCCCcEEEE
Confidence 3445566677778999996 999999999886544 567888886 344445555 6666
No 26
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=25.10 E-value=94 Score=30.35 Aligned_cols=83 Identities=16% Similarity=0.184 Sum_probs=52.4
Q ss_pred CceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCCcCeeeeeeEEeecccCCccceEE-EeecceEEEECC-CCCE
Q 010629 345 RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL-AGGDQEAVVISP-GGSI 422 (505)
Q Consensus 345 ~G~vTs~~~~g~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~Il-A~Ge~~~~ils~-~G~v 422 (505)
.|.++|+|+. .++.+||..++..+. +| . |.. - .-+|+ +.-+..+--+|. +|++
T Consensus 443 ~G~l~AiD~~----TG~~~W~~~~~~~~~-----~g----~-----l~T-----a--gglVf~G~~dg~l~A~Da~tGe~ 497 (571)
T d2ad6a1 443 MGQIRAFDLT----TGKAKWTKWEKFAAW-----GG----T-----LYT-----K--GGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CEEEEEECTT----TCCEEEEEEESSCCC-----SB----C-----EEE-----T--TTEEEEECTTSEEEEEETTTCCE
T ss_pred cccEEEeccC----CCceeeEcCCCCCCC-----cc----e-----eEe-----c--CCEEEEECCCCeEEEEECCCCcE
Confidence 4899999976 249999987653321 11 1 110 0 11122 334466777786 9999
Q ss_pred EEEEeCCCCCCcccEEeecCCCCcccEEEecC
Q 010629 423 LTSIDLPAPPTHALVCEDFSNDGLTDVILMTS 454 (505)
Q Consensus 423 l~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~ 454 (505)
|-+++||.+..++||.=-. ||.-=|+|++.
T Consensus 498 lW~~~l~~~~~a~P~ty~~--dGkqYi~v~~g 527 (571)
T d2ad6a1 498 LWNFKMPSGGIGSPMTYSF--KGKQYIGSMYG 527 (571)
T ss_dssp EEEEECSSCCCSCCEEEEE--TTEEEEEEEEC
T ss_pred EEEEECCCCceecceEEEE--CCEEEEEEEec
Confidence 9999999999999985322 45544555544
No 27
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=23.99 E-value=82 Score=25.79 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=38.3
Q ss_pred eEEEeecceEEEECC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-EEEE
Q 010629 404 MILAGGDQEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-VYGF 460 (505)
Q Consensus 404 ~IlA~Ge~~~~ils~-~G~vl~s~~Lp~pP~ap~Iv~DfngDG~nDiIVvT~~G-iygf 460 (505)
..++++...+.++|. +|+++..+.++..| ....|+.||. =|.|...+| |..|
T Consensus 253 ~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~----~~~~~s~dG~-~l~v~~~~~~i~v~ 306 (337)
T d1pbyb_ 253 TRAFGAYNVLESFDLEKNASIKRVPLPHSY----YSVNVSTDGS-TVWLGGALGDLAAY 306 (337)
T ss_dssp SEEEEEESEEEEEETTTTEEEEEEECSSCC----CEEEECTTSC-EEEEESBSSEEEEE
T ss_pred eEEEEccccEEEEECCCCcEEEEEcCCCCE----EEEEECCCCC-EEEEEeCCCcEEEE
Confidence 345666788999997 99999999987654 4567888886 345555666 6666
No 28
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=20.76 E-value=60 Score=26.34 Aligned_cols=38 Identities=18% Similarity=0.356 Sum_probs=27.0
Q ss_pred EEEeccCc-eeEEEccCCCeeEEEecCCCCeeeeccCCC
Q 010629 204 VVAHQKEG-IEAVHLASGRTVCKLHLQEGGLHADINGDG 241 (505)
Q Consensus 204 iVaH~~~G-IEViHL~SGrtlckL~L~~~~l~aDINgDG 241 (505)
.|+-.+.| |.|+.+.||+.+-.+.+........++-||
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG 43 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDG 43 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred EEEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCC
Confidence 45554544 999999999988888876654455666666
Done!