BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010640
(505 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/505 (48%), Positives = 316/505 (62%), Gaps = 13/505 (2%)
Query: 9 EDGFSADRLFSQGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVT 68
+DG +A +LF+ G TY+D + LP YIDF D V L++ LT+ I L P V+SPMDTVT
Sbjct: 15 DDGLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVT 74
Query: 69 EDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCIND--- 125
E GGIG +H NCT QA V K + V +P + D
Sbjct: 75 EAGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKKYEQGFITDP--VVLSPKDRVRDVFE 132
Query: 126 ANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIF--DYMRDCSSNVSVPANY 183
A G + +T++G SR++G ++ D + L + + F + M V PA
Sbjct: 133 AKARHGFCGIPITDTGRMGSRLVGIISSRDIDFLKEEEHDCFLEEIMTKREDLVVAPAGI 192
Query: 184 DLGQIDEVLEKNDV-DFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAA 242
L + +E+L+++ ++ +D E + ++ R D+++ + YP K + + GAA
Sbjct: 193 TLKEANEILQRSKKGKLPIVNEDDELVAIIARTDLKKNRDYPLASKDA---KKQLLCGAA 249
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQ 302
IGT E DK RL+ L +AGV+VVVLDSSQGNS FQI MIKY K YP L VIGGNVVT Q
Sbjct: 250 IGTHEDDKYRLDLLAQAGVDVVVLDSSQGNSIFQINMIKYIKDKYPNLQVIGGNVVTAAQ 309
Query: 303 AQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN 362
A+NLI+AGVD LRVGMGSGSIC TQEV A GR QATAVYKVS A + GVPVIADGGI N
Sbjct: 310 AKNLIDAGVDALRVGMGSGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQN 369
Query: 363 SGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTK--GSDQR 420
GHI KAL LGASTVMMGS LA +TEAPG Y + +G R+KKYRGMGSL+AM K S R
Sbjct: 370 VGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNR 429
Query: 421 YLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLR 480
Y + K+K+AQGV GAV DKGS+ KF+PY + ++ QD+GA SL ++ S L+
Sbjct: 430 YFSEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELK 489
Query: 481 LEVRTGAAQVEGGVHGLVSYEKKSF 505
E RT +AQVEGGVH L SYEK+ F
Sbjct: 490 FEKRTSSAQVEGGVHSLHSYEKRLF 514
>pdb|1JCN|A Chain A, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
pdb|1JCN|B Chain B, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
Length = 514
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/508 (47%), Positives = 324/508 (63%), Gaps = 19/508 (3%)
Query: 9 EDGFSADRLFSQGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVT 68
EDG +A +LF+ TY+D + LP +IDF D V L++ LTR I L P ++SPMDTVT
Sbjct: 15 EDGLTAQQLFASADDLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVT 74
Query: 69 EDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSL---DVFKAPDGCIND 125
E +GGIG +H NCT QA V R+V F V +P + D
Sbjct: 75 EADMAIAMALMGGIGFIHHNCTPEFQANEV-----RKVKNFEQGFITDPVVLSPSHTVGD 129
Query: 126 ---ANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLS--DNKVKIFDYMRDCSSNVSVP 180
A G + + +TE+GT S+++G VT D + L+ D+ + + M V P
Sbjct: 130 VLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIELVVAP 189
Query: 181 ANYDLGQIDEVLEKNDVDFVVLEKDGERL-DVVTREDVERLKGYPNLGKGTVGPDGKWMV 239
A L + +E+L+++ + + D + L ++ R D+++ + YP K + + +
Sbjct: 190 AGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLASKDS---QKQLLC 246
Query: 240 GAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVT 299
GAA+GTRE DK RL+ L +AGV+V+VLDSSQGNS +QI M+ Y K+ YP L VIGGNVVT
Sbjct: 247 GAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVT 306
Query: 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGG 359
QA+NLI+AGVDGLRVGMG GSIC TQEV A GR Q TAVYKV+ A + GVP+IADGG
Sbjct: 307 AAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGG 366
Query: 360 ISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTK--GS 417
I GH+VKAL LGASTVMMGS LA +TEAPG Y + +G R+KKYRGMGSL+AM K S
Sbjct: 367 IQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSS 426
Query: 418 DQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSR 477
+RY + K+KIAQGV G++ DKGS+ KF+PY + ++ G QD+GA SL ++ S
Sbjct: 427 QKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSG 486
Query: 478 TLRLEVRTGAAQVEGGVHGLVSYEKKSF 505
L+ E RT +AQ+EGGVHGL SYEK+ +
Sbjct: 487 ELKFEKRTMSAQIEGGVHGLHSYEKRLY 514
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/505 (48%), Positives = 315/505 (62%), Gaps = 13/505 (2%)
Query: 9 EDGFSADRLFSQGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVT 68
+DG +A +LF+ G TY+D + LP YIDF D V L++ LT+ I L P V+SPMDTVT
Sbjct: 15 DDGLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVT 74
Query: 69 EDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCIND--- 125
E GGIG +H NCT QA V K + V +P + D
Sbjct: 75 EAGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKKYEQGFITDP--VVLSPKDRVRDVFE 132
Query: 126 ANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIF--DYMRDCSSNVSVPANY 183
A G + +T++G SR++G ++ D + L + + F + M V PA
Sbjct: 133 AKARHGFCGIPITDTGRMGSRLVGIISSRDIDFLKEEEHDRFLEEIMTKREDLVVAPAGI 192
Query: 184 DLGQIDEVLEKNDV-DFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAA 242
L + +E+L+++ ++ ++ E + ++ R D+++ + YP K + + GAA
Sbjct: 193 TLKEANEILQRSKKGKLPIVNENDELVAIIARTDLKKNRDYPLASKDA---KKQLLCGAA 249
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQ 302
IGT E DK RL+ L AGV+VVVLDSSQGNS FQI MIKY K+ YP L VIGGNVVT Q
Sbjct: 250 IGTHEDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQ 309
Query: 303 AQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN 362
A+NLI+AGVD LRVGMG GSIC TQEV A GR QATAVYKVS A + GVPVIADGGI N
Sbjct: 310 AKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQN 369
Query: 363 SGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTK--GSDQR 420
GHI KAL LGASTVMMGS LA +TEAPG Y + +G R+KKYRGMGSL+AM K S R
Sbjct: 370 VGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNR 429
Query: 421 YLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLR 480
Y + K+K+AQGV GAV DKGS+ KF+PY + ++ QD+GA SL ++ S L+
Sbjct: 430 YFSEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELK 489
Query: 481 LEVRTGAAQVEGGVHGLVSYEKKSF 505
E RT +AQVEGGVH L SYEK+ F
Sbjct: 490 FEKRTSSAQVEGGVHSLHSYEKRLF 514
>pdb|4AF0|B Chain B, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/523 (45%), Positives = 312/523 (59%), Gaps = 32/523 (6%)
Query: 7 PIEDGFSADRLFS--QGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPM 64
P DG S L + TY+D + LP +I+FP VSL ++ T+NI L+ P ++SPM
Sbjct: 41 PRGDGLSLQELMDSRKNGGLTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPM 100
Query: 65 DTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCIN 124
DTVTED GG+GI+H NC+A +QA +V K + L + PD +
Sbjct: 101 DTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYENGFITDPLCL--GPDATVG 158
Query: 125 DANDFD---GSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPA 181
D + G V +TE+G S++LG VT D + D + I M S P
Sbjct: 159 DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ-FQDAETPIKSVMTTEVVTGSSPI 217
Query: 182 NYDLGQIDEVL-EKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWM-V 239
L + + +L E +++ +G + +V R D+ + + YP K P+ K +
Sbjct: 218 T--LEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKV---PESKQLYC 272
Query: 240 GAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVT 299
GAAIGTR DK+RL+ L +AG++VVVLDSSQGNS +QIE IK+ K+TYP++DVI GNVVT
Sbjct: 273 GAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVT 332
Query: 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGG 359
QA LI AG DGLR+GMGSGSIC TQEV AVGR Q TAVY V+ A++ G+P IADGG
Sbjct: 333 REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGG 392
Query: 360 ISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAM---TKG 416
I N GHI KAL LGAS VMMG LAG+TE+PG Y Y G+RVK YRGMGS+EAM +G
Sbjct: 393 IGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRG 452
Query: 417 S--------------DQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDL 462
S RY + +K+AQGV G VADKGS+ KF+PY ++ QD
Sbjct: 453 SASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDA 512
Query: 463 GASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVSYEKKSF 505
G S+ H RS +LR E+RT +AQ+EGGVHGL SY K+ F
Sbjct: 513 GIKSVSELHSCARSGSLRFELRTASAQLEGGVHGLNSYTKRLF 555
>pdb|4AF0|A Chain A, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/523 (45%), Positives = 311/523 (59%), Gaps = 32/523 (6%)
Query: 7 PIEDGFSADRLFS--QGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPM 64
P DG S L + TY+D + LP +I+FP VSL ++ T+NI L+ P ++SPM
Sbjct: 41 PRGDGLSLQELMDSRKNGGLTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPM 100
Query: 65 DTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCIN 124
DTVTED GG+GI+H NC+A +QA +V K + L + PD +
Sbjct: 101 DTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYENGFITDPLCL--GPDATVG 158
Query: 125 DANDFD---GSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPA 181
D + G V +TE+G S++LG VT D + D + I M S P
Sbjct: 159 DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ-FQDAETPIKSVMTTEVVTGSSPI 217
Query: 182 NYDLGQIDEVL-EKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWM-V 239
L + + +L E +++ +G + +V R D+ + + YP K P+ K +
Sbjct: 218 T--LEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKV---PESKQLYC 272
Query: 240 GAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVT 299
GAAIGTR DK+RL+ L +AG++VVVLDSSQGNS +QIE IK+ K+TYP++DVI GNVVT
Sbjct: 273 GAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVT 332
Query: 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGG 359
QA LI AG DGLR+GMGSGSIC TQEV AVGR Q TAVY V+ A++ G+P IADGG
Sbjct: 333 REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGG 392
Query: 360 ISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAM---TKG 416
I N GHI KAL LGAS VMMG LAG+TE+PG Y Y G+RVK YRGMGS+EAM +G
Sbjct: 393 IGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRG 452
Query: 417 S--------------DQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDL 462
S RY + +K+AQGV G VADKGS+ KF+PY ++ QD
Sbjct: 453 SASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDA 512
Query: 463 GASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVSYEKKSF 505
S+ H RS +LR E+RT +AQ+EGGVHGL SY K+ F
Sbjct: 513 AIKSVSELHSCARSGSLRFELRTASAQLEGGVHGLNSYTKRLF 555
>pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
Length = 494
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 251/455 (55%), Gaps = 14/455 (3%)
Query: 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGI 82
+ T+DDV+ +P Y + V + TRLTR I +++P V++ MDTVTE GGI
Sbjct: 16 ALTFDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVTEAALAKALAREGGI 75
Query: 83 GIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYV----FVT 138
GI+H N T +QAR V K I + V PD + +A D + V
Sbjct: 76 GIIHKNLTPDEQARQVSIVKKTENGIIYDPITV--TPDMTVKEAIDLMAEYKIGGLPVVD 133
Query: 139 ESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVD 198
E G R++G +T D + KI D M + P + L + E+L ++ ++
Sbjct: 134 EEG----RLVGLLTNRDVRFEKNLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIE 189
Query: 199 -FVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLV 257
++ KD + + ++T +D+ + +PN + G+ +VGAA+GT ER+E LV
Sbjct: 190 KLPLVSKDNKLVGLITIKDIMSVIEHPNAARDE---KGRLLVGAAVGTSPETMERVEKLV 246
Query: 258 KAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG 317
KAGV+V+V+D++ G+S IE ++ K YP+L V+ GNV T + LI+AG D ++VG
Sbjct: 247 KAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVG 306
Query: 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTV 377
+G GSICTT+ V VG Q TAV + S +A + VP+IADGGI SG IVKAL GA +V
Sbjct: 307 VGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESV 366
Query: 378 MMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGA 437
M+GS AG+ EAPG + GR+ K YRGMGSL AM GS RY + + +G+ G
Sbjct: 367 MVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGM 426
Query: 438 VADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHD 472
V KG+V + + ++ G +GA +++ +
Sbjct: 427 VPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQE 461
>pdb|3TSB|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSB|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
pdb|3TSD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
Length = 511
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 244/448 (54%), Gaps = 11/448 (2%)
Query: 25 TYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGI 84
T+DDV+ +P D VS+ T L+ ++ L++P +++ MDTVTE GG+GI
Sbjct: 36 TFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVTEADMAIAMARQGGLGI 95
Query: 85 VHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS---NYVFVTESG 141
+H N + QA V K + S F P+ + DA G + V V +
Sbjct: 96 IHKNMSIEQQAEQVDKVKRSESGVISDPF--FLTPEHQVYDAEHLMGKYRISGVPVVNNL 153
Query: 142 TRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVD-FV 200
R +++G +T D + D +KI D M ++ P L + +++L+K ++
Sbjct: 154 DER-KLVGIITNRDMRFIQDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLP 211
Query: 201 VLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG 260
+++ +G ++T +D+E++ +PN K G+ +VGAA+G R++ LVKA
Sbjct: 212 LVDNNGVLQGLITIKDIEKVIEFPNSAKDK---QGRLLVGAAVGVTADAMTRIDALVKAS 268
Query: 261 VNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS 320
V+ +VLD++ G+S I+ +K + YP L++I GNV T + LIEAG + ++VG+G
Sbjct: 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGP 328
Query: 321 GSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
GSICTT+ V VG Q TAVY ++ A + G+PVIADGGI SG +VKAL GA VM+G
Sbjct: 329 GSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLG 388
Query: 381 SFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVAD 440
S AG E+PG GR+ K YRGMGS+ AM KGS RY + K + +G+ G V
Sbjct: 389 SMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIEGRVPY 448
Query: 441 KGSVLKFIPYTMQAVKQGFQDLGASSLQ 468
KG + + + ++ G GA L+
Sbjct: 449 KGPLADTVHQLVGGLRAGMGYCGAQDLE 476
>pdb|3USB|A Chain A, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
pdb|3USB|B Chain B, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
Length = 511
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 241/448 (53%), Gaps = 11/448 (2%)
Query: 25 TYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGI 84
T+DDV+ +P D VS+ T L+ ++ L++P +++ DTVTE GG+GI
Sbjct: 36 TFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGXDTVTEADXAIAXARQGGLGI 95
Query: 85 VHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS---NYVFVTESG 141
+H N + QA V K + S F P+ + DA G + V V +
Sbjct: 96 IHKNXSIEQQAEQVDKVKRSESGVISDPF--FLTPEHQVYDAEHLXGKYRISGVPVVNNL 153
Query: 142 TRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVD-FV 200
R +++G +T D + D +KI D + ++ P L + +++L+K ++
Sbjct: 154 DER-KLVGIITNRDXRFIQDYSIKISD-VXTKEQLITAPVGTTLSEAEKILQKYKIEKLP 211
Query: 201 VLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG 260
+++ +G ++T +D+E++ +PN K G+ +VGAA+G R++ LVKA
Sbjct: 212 LVDNNGVLQGLITIKDIEKVIEFPNSAKDK---QGRLLVGAAVGVTADAXTRIDALVKAS 268
Query: 261 VNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS 320
V+ +VLD++ G+S I+ +K + YP L++I GNV T + LIEAG + ++VG+G
Sbjct: 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGP 328
Query: 321 GSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
GSICTT+ V VG Q TAVY ++ A + G+PVIADGGI SG VKAL GA V +G
Sbjct: 329 GSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDXVKALAAGAHVVXLG 388
Query: 381 SFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVAD 440
S AG E+PG GR+ K YRG GS+ A KGS RY + K + +G+ G V
Sbjct: 389 SXFAGVAESPGETEIYQGRQFKVYRGXGSVGAXEKGSKDRYFQEGNKKLVPEGIEGRVPY 448
Query: 441 KGSVLKFIPYTMQAVKQGFQDLGASSLQ 468
KG + + + ++ G GA L+
Sbjct: 449 KGPLADTVHQLVGGLRAGXGYCGAQDLE 476
>pdb|4FXS|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae Complexed With Imp And Mycophenolic Acid
Length = 496
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 256/483 (53%), Gaps = 27/483 (5%)
Query: 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGI 82
+ T+DDV+ +P + + L TRLT+NI L++P V++ DTVTE GGI
Sbjct: 10 ALTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPXVSASXDTVTEARLAIALAQEGGI 69
Query: 83 GIVHSNCTAADQARLVVSAKSRRVPIFSSSL---DVFKAPDGCINDANDFDG----SNYV 135
G +H N + QA A+ +V IF + + V P+ I D + + +
Sbjct: 70 GFIHKNXSIEQQA-----AQVHQVKIFEAGVVTHPVTVRPEQTIADVXELTHYHGFAGFP 124
Query: 136 FVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKN 195
VTE+ + ++G +T D ++D + +V ++ E K
Sbjct: 125 VVTEN----NELVGIITGRDVRFVTDLTKSVAAVXTPKERLATVKEGATGAEVQEKXHKA 180
Query: 196 DVDFVVLEKDGERLD-VVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLE 254
V+ +++ D +L +T +D + + PN K G+ VGAA+G ++ER++
Sbjct: 181 RVEKILVVNDEFQLKGXITAKDFHKAESKPNACKDE---QGRLRVGAAVGAAPGNEERVK 237
Query: 255 HLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGL 314
LV+AGV+V+++DSS G+S ++ I+ + YP L++IGGNV T A+ LIEAGV +
Sbjct: 238 ALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAV 297
Query: 315 RVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGA 374
+VG+G GSICTT+ V VG Q TA+ + +A + G+PVIADGGI SG I KA+ GA
Sbjct: 298 KVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGA 357
Query: 375 STVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYL-GDKAKLK-IAQ 432
S V +GS AG+ EAPG + GR K YRG GSL A +KGS RY D A K + +
Sbjct: 358 SCVXVGSXFAGTEEAPGEVILYQGRSYKAYRGXGSLGAXSKGSSDRYFQTDNAADKLVPE 417
Query: 433 GVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEG 492
G+ G +A KG + + I ++ G+++++ LR++ + + +GA E
Sbjct: 418 GIEGRIAYKGHLKEIIHQQXGGLRSCXGLTGSATVED----LRTKAQFVRI-SGAGXKES 472
Query: 493 GVH 495
VH
Sbjct: 473 HVH 475
>pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
From Streptococcus Pyogenes
Length = 491
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 239/456 (52%), Gaps = 14/456 (3%)
Query: 24 YTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIG 83
YT+DDV+ +P + V L T+L N+ L++P + + DTVT GG+G
Sbjct: 12 YTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAXDTVTGSKXAIAIARAGGLG 71
Query: 84 IVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS---NYVFVTES 140
++H N + +QA V K + F P+ +++A + + V + E+
Sbjct: 72 VIHKNXSITEQAEEVRKVKRSENGVIIDPF--FLTPEHKVSEAEELXQRYRISGVPIVET 129
Query: 141 GTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFV 200
R +++G +T D +SD I ++ V+ DL + +L ++ ++ +
Sbjct: 130 LANR-KLVGIITNRDXRFISDYNAPISEHX-TSEHLVTAAVGTDLETAERILHEHRIEKL 187
Query: 201 VLEKDGERLD-VVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKA 259
L + RL ++T +D+E++ +P+ K G + +V AA+G ER E L +A
Sbjct: 188 PLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFG---RLLVAAAVGVTSDTFERAEALFEA 244
Query: 260 GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMG 319
G + +V+D++ G+S+ + I + +P +I GN+ T A+ L +AGVD ++VG+G
Sbjct: 245 GADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIG 304
Query: 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379
GSICTT+ V VG Q TA+Y +++A + G +IADGGI SG IVKAL G + V +
Sbjct: 305 PGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVXL 364
Query: 380 GSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLG---DKAKLKIAQGVVG 436
GS AG+ EAPG GR+ K YRG GS+ A KGS RY ++A + +G+ G
Sbjct: 365 GSXFAGTDEAPGETEIYQGRKYKTYRGXGSIAAXKKGSSDRYFQGSVNEANKLVPEGIEG 424
Query: 437 AVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHD 472
VA KG+ + + ++ G +GA +Q H+
Sbjct: 425 RVAYKGAASDIVFQXLGGIRSGXGYVGAGDIQELHE 460
>pdb|3ZFH|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Inosine
5'-monophosphate Dehydrogenase
Length = 510
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 261/496 (52%), Gaps = 28/496 (5%)
Query: 15 DRLFSQGY-------SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTV 67
+ L+ QG+ + T+DDV+ +P Y + VSL TRLTR I+L++P V++ MDTV
Sbjct: 14 ENLYFQGHMLRISQEALTFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTV 73
Query: 68 TEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPD--GCIND 125
TE GGIGI+H N QA V K I + V + +
Sbjct: 74 TEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAIVRDPVTVTPSTKIIELLQM 133
Query: 126 ANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDL 185
A ++ S + V + ++G VT D + + M V+ L
Sbjct: 134 AREYGFSGFPVVEQG-----ELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTAREGTPL 188
Query: 186 GQIDEVLEKNDVD-FVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIG 244
++ L +N ++ +V++++ +VT D+E+ K YP K G+ VGAA+G
Sbjct: 189 EEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDE---QGRLRVGAAVG 245
Query: 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQ 304
T ER+ LV AGV+VVV+D++ G+S IE +++ K+T+P++ VIGGN+ T A+
Sbjct: 246 TGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAK 305
Query: 305 NLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSG 364
L EAG D ++VG+G GSICTT+ V VG Q +A+ V++ +GVP+IADGGI SG
Sbjct: 306 ALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSG 365
Query: 365 HIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAM--TKGSDQRYL 422
+ KA+V GA VMMGS AG+ EAPG GR K YRGMGSL AM ++GS RY
Sbjct: 366 DLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYF 425
Query: 423 GDK---AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTL 479
D A+ + +G+ G V KG++ + M ++ G++ +Q +R++
Sbjct: 426 QDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQ----MRTQPQ 481
Query: 480 RLEVRTGAAQVEGGVH 495
+ + TGA E VH
Sbjct: 482 FVRI-TGAGMAESHVH 496
>pdb|4AVF|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
Length = 490
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 255/481 (53%), Gaps = 21/481 (4%)
Query: 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGI 82
+ T+DDV+ +P Y + VSL TRLTR I+L++P V++ MDTVTE GGI
Sbjct: 9 ALTFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGI 68
Query: 83 GIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPD--GCINDANDFDGSNYVFVTES 140
GI+H N QA V K I + V + + A ++ S + V +
Sbjct: 69 GIIHKNMGIEQQAAEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQG 128
Query: 141 GTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVD-F 199
++G VT D + + M V+ L ++ L +N ++
Sbjct: 129 -----ELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKM 183
Query: 200 VVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKA 259
+V++++ +VT D+E+ K YP K G+ VGAA+GT ER+ LV A
Sbjct: 184 LVVDENFYLRGLVTFRDIEKAKTYPLASKDE---QGRLRVGAAVGTGADTGERVAALVAA 240
Query: 260 GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMG 319
GV+VVV+D++ G+S IE +++ K+T+P++ VIGGN+ T A+ L EAG D ++VG+G
Sbjct: 241 GVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIG 300
Query: 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379
GSICTT+ V VG Q +A+ V++ +GVP+IADGGI SG + KA+V GA VMM
Sbjct: 301 PGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360
Query: 380 GSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAM--TKGSDQRYLGDK---AKLKIAQGV 434
GS AG+ EAPG GR K YRGMGSL AM ++GS RY D A+ + +G+
Sbjct: 361 GSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLVPEGI 420
Query: 435 VGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGV 494
G V KG++ + M ++ G++ +Q +R++ + + TGA E V
Sbjct: 421 EGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQ----MRTQPQFVRI-TGAGMAESHV 475
Query: 495 H 495
H
Sbjct: 476 H 476
>pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
Length = 486
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 245/456 (53%), Gaps = 25/456 (5%)
Query: 24 YTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIG 83
YT+DDV+ +P + V +STR+T N+ L++P +++ MDTVTE GG+G
Sbjct: 15 YTFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLG 74
Query: 84 IVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDA---NDFDGSNYVFVTES 140
++H N +Q V K I + + APD ++ A + G + + V E
Sbjct: 75 VIHRNMGIEEQVEQVKRVKRAERLIVEDVITI--APDETVDFALFLMEKHGIDGLPVVED 132
Query: 141 GTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVD-F 199
+++G +TK D VK + M ++VP + ++ + +++ +N +D
Sbjct: 133 ----EKVVGIITKKDIAAREGKLVK--ELM--TKEVITVPESIEVEEALKIMIENRIDRL 184
Query: 200 VVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKA 259
V+++ G+ + ++T D+ K Y N + +G+ +V AA+ D +R L KA
Sbjct: 185 PVVDERGKLVGLITMSDLVARKKYKNAVRDE---NGELLVAAAVSP--FDIKRAIELDKA 239
Query: 260 GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMG 319
GV+V+V+D++ ++ I+ +K ++ + D I GN+ +L A D ++VG+G
Sbjct: 240 GVDVIVVDTAHAHNLKAIKSMKEMRQKV-DADFIVGNIANPKAVDDLTFA--DAVKVGIG 296
Query: 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379
GSICTT+ V VG Q TAV V+ A + G+ VIADGGI SG IVKA+ GA VM+
Sbjct: 297 PGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVML 356
Query: 380 GSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGD---KAKLKIAQGVVG 436
G+ LAG+ EAPG V NGR+ K+YRGMGSL AM KG +RY K + + +GV G
Sbjct: 357 GNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEG 416
Query: 437 AVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHD 472
V +G+V + + + +K G +GA +++ +
Sbjct: 417 VVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKE 452
>pdb|4FEZ|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant
pdb|4FEZ|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant
Length = 388
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 172/283 (60%), Gaps = 10/283 (3%)
Query: 215 EDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSS 274
+D + + PN K G+ VGAA+G ++ER++ LV+AGV+V+++DSS G+S
Sbjct: 100 KDFHKAESKPNACKDE---QGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSE 156
Query: 275 FQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGR 334
++ I+ + YP L++IGGNV T A+ LIEAGV ++VG+G GSICTT+ V VG
Sbjct: 157 GVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGV 216
Query: 335 GQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYV 394
Q TA+ + +A + G+PVIADGGI SG I KA+ GAS VM+GS AG+ EAPG +
Sbjct: 217 PQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVI 276
Query: 395 YQNGRRVKKYRGMGSLEAMTKGSDQRYL-GDKAKLK-IAQGVVGAVADKGSVLKFIPYTM 452
GR K YRGMGSL AM+KGS RY D A K + +G+ G +A KG + + I M
Sbjct: 277 LYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQM 336
Query: 453 QAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVH 495
++ G+++++ LR++ + + +GA E VH
Sbjct: 337 GGLRSCMGLTGSATVED----LRTKAQFVRI-SGAGMKESHVH 374
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGI 82
+ T+DDV+ +P + + L TRLT+NI L++P V++ MDTVTE GGI
Sbjct: 13 ALTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGI 72
Query: 83 GIVHSNCTAADQARLVVSAKSRRVPIFSS--SLDVFKA---PDGCIND 125
G +H N + QA A+ +V IF S + D KA P+ C ++
Sbjct: 73 GFIHKNMSIEQQA-----AQVHQVKIFESGGAKDFHKAESKPNACKDE 115
>pdb|4FO4|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp And
Mycophenolic Acid
pdb|4FO4|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp And
Mycophenolic Acid
pdb|4HLV|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, In Complex With Nad And Imp
pdb|4HLV|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, In Complex With Nad And Imp
pdb|4IX2|A Chain A, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|B Chain B, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|C Chain C, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|D Chain D, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
Length = 366
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 164/263 (62%), Gaps = 7/263 (2%)
Query: 235 GKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG 294
G VGAA+G ++ER++ LV+AGV+V+++DSS G+S ++ I+ + YP L++IG
Sbjct: 95 GGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG 154
Query: 295 GNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPV 354
GNV T A+ LIEAGV ++VG+G GSICTT+ V VG Q TA+ + +A + G+PV
Sbjct: 155 GNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPV 214
Query: 355 IADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMT 414
IADGGI SG I KA+ GAS VM+GS AG+ EAPG + GR K YRGMGSL AM+
Sbjct: 215 IADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMS 274
Query: 415 KGSDQRYL-GDKAKLK-IAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHD 472
KGS RY D A K + +G+ G +A KG + + I M ++ G+++++
Sbjct: 275 KGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVED--- 331
Query: 473 LLRSRTLRLEVRTGAAQVEGGVH 495
LR++ + + +GA E VH
Sbjct: 332 -LRTKAQFVRI-SGAGMKESHVH 352
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGI 82
+ T+DDV+ +P + + L TRLT+NI L++P V++ MDTVTE GGI
Sbjct: 13 ALTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGI 72
Query: 83 GIVHSNCTAADQARLVVSAK 102
G +H N + QA V K
Sbjct: 73 GFIHKNMSIEQQAAQVHQVK 92
>pdb|3FFS|A Chain A, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|B Chain B, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|C Chain C, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|D Chain D, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
Length = 400
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 226/478 (47%), Gaps = 100/478 (20%)
Query: 21 GYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLG 80
G T++D++ +P+Y + VSL T+LT+N+ L
Sbjct: 7 GKGLTFEDILLVPNYSEVLPREVSLETKLTKNVSL------------------------- 41
Query: 81 GIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTES 140
++P+ SS++D +
Sbjct: 42 ------------------------KIPLISSAMDTVTE-----------------HLMAV 60
Query: 141 GTRRSRILGYVTKS-DWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDF 199
G R +G + K+ D E+ + +K+ +++ + N S P D+ L+K D
Sbjct: 61 GMARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEKNESTP--------DQNLDKESTDG 112
Query: 200 VVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKA 259
K +D + E+++ G+ VGAAIG E ++ +L LV+A
Sbjct: 113 KDT-KSNNNIDAYSNENLDN--------------KGRLRVGAAIGVNEIERAKL--LVEA 155
Query: 260 GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMG 319
GV+V+VLDS+ G+S I +K K +DVI GNVVT + LIE G DG++VG+G
Sbjct: 156 GVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVGIG 214
Query: 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379
GSICTT+ V VG Q TA+ K SS+A++ G+P+IADGGI SG I KAL +GAS+VM+
Sbjct: 215 PGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274
Query: 380 GSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDK--AKLKIAQGVVGA 437
GS LAG+ E+PG K YRGMGS+ AM GS RY +K + +G+ G
Sbjct: 275 GSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGR 334
Query: 438 VADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVH 495
V KG + + + ++ LG++S++ L ++ +E+ T + E VH
Sbjct: 335 VKYKGEMEGVVYQLVGGLRSCMGYLGSASIEE----LWKKSSYVEITTSGLR-ESHVH 387
>pdb|1EEP|A Chain A, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi
Inosine 5'- Monphosphate Dehydrogenase In Complex With A
Sulfate Ion
pdb|1EEP|B Chain B, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi
Inosine 5'- Monphosphate Dehydrogenase In Complex With A
Sulfate Ion
Length = 404
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 149/256 (58%), Gaps = 6/256 (2%)
Query: 215 EDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSS 274
++ E + +PN K + K VGAA+ ER+E LVKA V+++V+DS+ G+S+
Sbjct: 123 KNAEHKEDFPNACKDL---NNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHST 179
Query: 275 FQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGR 334
IE+IK K YP LD+I GN+VT A +LI G D L+VG+G GSICTT+ V VG
Sbjct: 180 RIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGV 239
Query: 335 GQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYV 394
Q TA+ V + + +IADGGI SG +VKA+ GA +VM+G+ AG+ E+P +
Sbjct: 240 PQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEI 299
Query: 395 YQNGRRVKKYRGMGSLEAMTKGSDQRYL---GDKAKLKIAQGVVGAVADKGSVLKFIPYT 451
NG++ K Y GMGS+ AM +GS RY ++ K + +G+ G V G + +
Sbjct: 300 IYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQL 359
Query: 452 MQAVKQGFQDLGASSL 467
+ G LGA+++
Sbjct: 360 KGGLMSGMGYLGAATI 375
>pdb|3KHJ|A Chain A, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|B Chain B, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|C Chain C, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|D Chain D, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|E Chain E, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|F Chain F, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|G Chain G, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|H Chain H, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
Length = 361
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 146/236 (61%), Gaps = 5/236 (2%)
Query: 235 GKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG 294
G VGAAIG E ++ +L LV+AGV+V+VLDS+ G+S I +K K +DVI
Sbjct: 94 GGLRVGAAIGVNEIERAKL--LVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIV 150
Query: 295 GNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPV 354
GNVVT + LIE G DG++VG+G GSICTT+ V VG Q TA+ K SS+A++ G+P+
Sbjct: 151 GNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPI 210
Query: 355 IADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMT 414
IADGGI SG I KAL +GAS+VM+GS LAG+ E+PG K YRGMGS+ AM
Sbjct: 211 IADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMK 270
Query: 415 KGSDQRYLGDK--AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQ 468
GS RY +K + +G+ G V KG + + + ++ LG++S++
Sbjct: 271 SGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIE 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 21 GYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLG 80
G T++D++ +P+Y + VSL T+LT+N+ L +P ++S MDTVTE LG
Sbjct: 10 GKGLTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLG 69
Query: 81 GIGIVHSNCTAADQARLVVSAKS 103
GIGI+H N Q V+ K+
Sbjct: 70 GIGIIHKNMDMESQVNEVLKVKN 92
>pdb|1ME8|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Rvp Bound
pdb|1ME9|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Imp Bound
pdb|1MEH|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Imp And Moa Bound
Length = 503
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 251/497 (50%), Gaps = 36/497 (7%)
Query: 24 YTYDDVIFLP--HYIDFPIDAVSLSTRLTR-------NIDLSLPCVASPMDTVTEDYXXX 74
+T+++ + +P +D V+LST L + I+L +P V++ M +V+ +
Sbjct: 10 HTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAI 69
Query: 75 XXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDA---NDFDG 131
GGI + + + QA +V + K+ + S +V PD D +
Sbjct: 70 ALAREGGISFIFGSQSIESQAAMVHAVKNFKAGFVVSDSNV--KPDQTFADVLAISQRTT 127
Query: 132 SNYVFVTESGTRRSRILGYVTKSDWE-NLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDE 190
N V VT+ GT +LG VT+ D+ +L+ + K+ D M S V+ + L + ++
Sbjct: 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANK 187
Query: 191 VLEKNDVDFVVLEKDGERLD-VVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESD 249
++ + ++ + + D + L +V R+D +R + N V +++VGA I TR+
Sbjct: 188 IIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHN---ELVDSQKRYLVGAGINTRDF- 243
Query: 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGGNVVTMYQAQNLIE 308
+ER+ LV+AG +V+ +DSS G S +Q I + ++ Y ++ V GN+V + L +
Sbjct: 244 RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLAD 303
Query: 309 AGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKV----SSIAAQSGV--PVIADGGISN 362
AG D +++G+G GSI T+E +GRGQATAV V + ++G+ PV +DGGI
Sbjct: 304 AGADFIKIGIGGGSIXITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVY 363
Query: 363 SGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRY- 421
H+ AL +GA +M+G + A E+P V NG +K+Y G GS A QRY
Sbjct: 364 DYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNW---QRYD 420
Query: 422 LGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRL 481
LG K KL +GV V G + + ++ VK + GA ++ L+S+ ++
Sbjct: 421 LGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQ----LQSKA-KI 475
Query: 482 EVRTGAAQVEGGVHGLV 498
+ + + VEGG H ++
Sbjct: 476 TLVSSVSIVEGGAHDVI 492
>pdb|1ME7|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Rvp And Moa Bound
pdb|1MEI|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Xmp And Mycophenolic Acid
Bound
pdb|1MEW|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Xmp And Nad Bound
pdb|1AK5|A Chain A, Inosine Monophosphate Dehydrogenase (impdh) From
Tritrichomonas Foetus
Length = 503
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 252/497 (50%), Gaps = 36/497 (7%)
Query: 24 YTYDDVIFLP--HYIDFPIDAVSLSTRLTR-------NIDLSLPCVASPMDTVTEDYXXX 74
+T+++ + +P +D V+LST L + I+L +P V++ M +V+ +
Sbjct: 10 HTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAI 69
Query: 75 XXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDA---NDFDG 131
GGI + + + QA +V + K+ + S +V PD D +
Sbjct: 70 ALAREGGISFIFGSQSIESQAAMVHAVKNFKAGFVVSDSNV--KPDQTFADVLAISQRTT 127
Query: 132 SNYVFVTESGTRRSRILGYVTKSDWE-NLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDE 190
N V VT+ GT +LG VT+ D+ +L+ + K+ D M S V+ + L + ++
Sbjct: 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANK 187
Query: 191 VLEKNDVDFVVLEKDGERLD-VVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESD 249
++ + ++ + + D + L +V R+D +R + N V +++VGA I TR+
Sbjct: 188 IIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHN---ELVDSQKRYLVGAGINTRDF- 243
Query: 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGGNVVTMYQAQNLIE 308
+ER+ LV+AG +V+ +DSS G S +Q I + ++ Y ++ V GN+V + L +
Sbjct: 244 RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLAD 303
Query: 309 AGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKV----SSIAAQSG--VPVIADGGISN 362
AG D +++G+G GSIC T+E +GRGQATAV V + ++G +PV +DGGI
Sbjct: 304 AGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVY 363
Query: 363 SGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRY- 421
H+ AL +GA +M+G + A E+P V NG +K+Y G GS A QRY
Sbjct: 364 DYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNW---QRYD 420
Query: 422 LGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRL 481
LG K KL +GV V G + + ++ VK + GA ++ L+S+ ++
Sbjct: 421 LGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQ----LQSKA-KI 475
Query: 482 EVRTGAAQVEGGVHGLV 498
+ + + VEGG H ++
Sbjct: 476 TLVSSVSIVEGGAHDVI 492
>pdb|2A7R|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
Length = 366
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 11/253 (4%)
Query: 233 PDGKWMVGAAIGTRESDKERLEHLVKA--GVNVVVLDSSQGNSSFQIEMIKYAKKTYPEL 290
PD + A+ GT SD E+LE +++A V + LD + G S +E +K +K +P+
Sbjct: 111 PDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQH 170
Query: 291 DVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS 350
++ GNVVT + LI +G D ++VG+G GS+CTT++ VG Q +AV + + A
Sbjct: 171 TIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGL 230
Query: 351 GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSL 410
+I+DGG S G + KA GA VM+G LAG +E+ G + ++G++ K + GM S
Sbjct: 231 KGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSE 290
Query: 411 EAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSA 470
AM K Y G A+ + ++G V KG V I + ++ +GA+ L+
Sbjct: 291 MAMKK-----YAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKE- 344
Query: 471 HDLLRSRTLRLEV 483
L RT + V
Sbjct: 345 ---LSRRTTFIRV 354
>pdb|2BZN|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|E Chain E, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|F Chain F, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|G Chain G, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|H Chain H, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2C6Q|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|E Chain E, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|F Chain F, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|G Chain G, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|H Chain H, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
Length = 351
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 11/253 (4%)
Query: 233 PDGKWMVGAAIGTRESDKERLEHLVKA--GVNVVVLDSSQGNSSFQIEMIKYAKKTYPEL 290
PD + A+ GT SD E+LE +++A V + LD + G S +E +K +K +P+
Sbjct: 103 PDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQH 162
Query: 291 DVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS 350
++ GNVVT + LI +G D ++VG+G GS+CTT++ VG Q +AV + + A
Sbjct: 163 TIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGL 222
Query: 351 GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSL 410
+I+DGG S G + KA GA VM+G LAG +E+ G + ++G++ K + GM S
Sbjct: 223 KGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSE 282
Query: 411 EAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSA 470
AM K Y G A+ + ++G V KG V I + ++ +GA+ L+
Sbjct: 283 MAMKK-----YAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKE- 336
Query: 471 HDLLRSRTLRLEV 483
L RT + V
Sbjct: 337 ---LSRRTTFIRV 346
>pdb|2BLE|A Chain A, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|A Chain A, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|B Chain B, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|C Chain C, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|D Chain D, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
Length = 367
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 125/238 (52%), Gaps = 7/238 (2%)
Query: 233 PDGKWMVGAAIGTRESDKERLEHLVKA--GVNVVVLDSSQGNSSFQIEMIKYAKKTYPEL 290
P+ V + G+ ++D E++ +++A V + LD + G S +E +K + +PE
Sbjct: 115 PECLQNVAVSSGSGQNDLEKMTSILEAVPQVKFICLDVANGYSEHFVEFVKLVRAKFPEH 174
Query: 291 DVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS 350
++ GNVVT + LI +G D ++VG+G GS+CTT+ VG Q +AV + + A
Sbjct: 175 TIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGL 234
Query: 351 GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSL 410
+I+DGG + G + KA GA VM+G +G TE G + +NGR++K + GM S
Sbjct: 235 KGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGRKLKLFYGMSSD 294
Query: 411 EAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQ 468
AM K + G A+ + ++G V KG V I + ++ +GA+ L+
Sbjct: 295 TAMNK-----HAGGVAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLK 347
>pdb|3R2G|A Chain A, Crystal Structure Of Inosine 5' Monophosphate
Dehydrogenase From Legionella Pneumophila
Length = 361
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 17/265 (6%)
Query: 236 KWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG 295
K V ++G E++ +R E L AG + +D + ++ + + +K ++ ++ G
Sbjct: 88 KGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAG 147
Query: 296 NVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355
NV T A L G D ++ G+G GS+C+T+ G T + S ++ ++
Sbjct: 148 NVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCS----RADRSIV 203
Query: 356 ADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ--NGRRVKKYRGMGSLEAM 413
ADGGI SG IVKAL GA VM+G LAGS PG V+Q +G +VK+YRGM S EA
Sbjct: 204 ADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGE-VFQKDDGSKVKRYRGMASREA- 261
Query: 414 TKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473
+ +LG + K A+GV V K + I + ++ G GA S+
Sbjct: 262 ----QEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQ-- 315
Query: 474 LRSRTLRLEVRTGAAQVEGGVHGLV 498
R L + T A ++E H L+
Sbjct: 316 ---RKLNYVIVTQAGRIESLPHKLL 337
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTR--NIDLSLPCVASPMDTVTEDYXXXXXXXLG 80
+ T+DDV+ +P Y V +T R + L+LP +++ MDT+TE G
Sbjct: 7 AITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANMDTITESNMANFMHSKG 66
Query: 81 GIGIVHSNCTAADQARLVVSAKSRRVPIFSS 111
+G +H T + + K + P+F S
Sbjct: 67 AMGALHRFMTIEEN---IQEFKKCKGPVFVS 94
>pdb|1PVN|A Chain A, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|B Chain B, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|C Chain C, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|D Chain D, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
Length = 376
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 150/271 (55%), Gaps = 17/271 (6%)
Query: 236 KWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIG 294
+++VGA I TR+ +ER+ LV+AG +V+ +DSS G S +Q I + ++ Y ++ V
Sbjct: 104 RYLVGAGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGA 162
Query: 295 GNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKV----SSIAAQS 350
GN+V + L +AG D +++G+G GSIC T+E +GRGQATAV V + ++
Sbjct: 163 GNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEET 222
Query: 351 G--VPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMG 408
G +PV +DGGI H+ AL +GA +M+G + A E+P V NG +K+Y G G
Sbjct: 223 GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEG 282
Query: 409 SLEAMTKGSDQRY-LGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSL 467
S A QRY LG K KL +GV V G + + ++ VK + GA ++
Sbjct: 283 SSRARNW---QRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTI 339
Query: 468 QSAHDLLRSRTLRLEVRTGAAQVEGGVHGLV 498
L+S+ ++ + + + VEGG H ++
Sbjct: 340 PQ----LQSKA-KITLVSSVSIVEGGAHDVI 365
>pdb|1LRT|A Chain A, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|B Chain B, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|C Chain C, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|D Chain D, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
Length = 376
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 17/271 (6%)
Query: 236 KWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIG 294
+++VGA I TR+ +ER+ LV+AG +V+ +DSS G S +Q I + + Y ++ V
Sbjct: 104 RYLVGAGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIRDKYGDKVKVGA 162
Query: 295 GNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKV----SSIAAQS 350
GN+V + L +AG D +++G+G GSIC T+E +GRGQATAV V + ++
Sbjct: 163 GNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEET 222
Query: 351 G--VPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMG 408
G +PV +DGGI H+ AL +GA +M+G + A E+P V NG +K+Y G G
Sbjct: 223 GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEG 282
Query: 409 SLEAMTKGSDQRY-LGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSL 467
S A QRY LG K KL +GV V G + + ++ VK + GA ++
Sbjct: 283 SSRARNW---QRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTI 339
Query: 468 QSAHDLLRSRTLRLEVRTGAAQVEGGVHGLV 498
L+S+ ++ + + + VEGG H ++
Sbjct: 340 PQ----LQSKA-KITLVSSVSIVEGGAHDVI 365
>pdb|1YPF|A Chain A, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis
At 1.8 A Resolution
pdb|1YPF|B Chain B, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis
At 1.8 A Resolution
pdb|2A1Y|A Chain A, Crystal Structure Of Guac-Gmp Complex From Bacillus
Anthracis At 2.26 A Resolution
Length = 336
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 242 AIGTRESDKERLEHLVKAGVN--VVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVT 299
++G +E + E ++ L + + +D + G+S+ I MI++ KK PE VI GNV T
Sbjct: 100 SVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGT 159
Query: 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRG--QATAVYKVSSIAAQSGVPVIAD 357
+ L AG D +VG+G G +C T+ G G Q A+ + A++ P+IAD
Sbjct: 160 PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASK---PIIAD 216
Query: 358 GGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGS 417
GGI +G + K++ GA+ VM+GS AG E+PG + ++G+ K+Y GS KG
Sbjct: 217 GGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEY--FGSASEFQKGE 274
Query: 418 DQRYLGDK 425
+ G K
Sbjct: 275 KKNVEGKK 282
>pdb|2A7N|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
Of (S)- Mandelate Dehydrogenase
pdb|2A7P|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
Of (S)- Mandelate Dehydrogenase In Complex With Its
Substrate 3-Indolelactate
pdb|2A85|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
Of (S)- Mandelate Dehydrogenase In Complex With Its
Substrate 2- Hydroxyoctanoate
pdb|3GIY|A Chain A, Crystal Structures Of The G81a Mutant Of The Active
Chimera Of (S)-Mandelate Dehydrogenase And Its Complex
With Two Of Its Substrates
Length = 380
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 266 LDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325
L S Q ++SF E +++ + +P ++ G +++ A I G DG+ + G
Sbjct: 203 LMSRQMDASFNWEALRWLRDLWPHKLLVKG-LLSAEDADRCIAEGADGVILSNHGGR--- 258
Query: 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
Q CA+ + + ++ A++G PV+ D G IVKAL LGA V++G
Sbjct: 259 -QLDCAI-----SPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLG 307
>pdb|1HUV|A Chain A, Crystal Structure Of A Soluble Mutant Of The
Membrane-Associated (S)- Mandelate Dehydrogenase From
Pseudomonas Putida At 2.15a Resolution
pdb|1P4C|A Chain A, High Resolution Structure Of Oxidized Active Mutant Of
(S)- Mandelate Dehydrogenase
pdb|1P5B|A Chain A, High Resolution Structure Of Reduced Active Mutant Of
(S)-Mandelate Dehydrogenase
Length = 380
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 266 LDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325
L S Q ++SF E +++ + +P ++ G +++ A I G DG+ + G
Sbjct: 203 LMSRQMDASFNWEALRWLRDLWPHKLLVKG-LLSAEDADRCIAEGADGVILSNHGGR--- 258
Query: 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
Q CA+ + + ++ A++G PV+ D G IVKAL LGA V++G
Sbjct: 259 -QLDCAI-----SPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLG 307
>pdb|2QR6|A Chain A, Crystal Structure Of Imp DehydrogenaseGMP REDUCTASE-Like
Protein (Np_599840.1) From Corynebacterium Glutamicum
Atcc 13032 Kitasato At 1.50 A Resolution
Length = 393
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 352 VPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPG 391
V +IADG I NSG +VKA+ GA V++GS LA + EA G
Sbjct: 278 VHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAG 317
>pdb|1GYL|A Chain A, Involvement Of Tyr24 And Trp108 In Substrate Binding And
Substrate Specificity Of Glycolate Oxidase
pdb|1GYL|B Chain B, Involvement Of Tyr24 And Trp108 In Substrate Binding And
Substrate Specificity Of Glycolate Oxidase
Length = 369
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPG 391
AAQ +PV DGG+ + KAL LGA+ V +G + S A G
Sbjct: 275 AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEG 319
>pdb|1AL7|A Chain A, Three-Dimensional Structures Of Glycolate Oxidase With
Bound Active- Site Inhibitors
pdb|1AL8|A Chain A, Three-Dimensional Structure Of Glycolate Oxidase With
Bound Active- Site Inhibitors
Length = 359
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPG 391
AAQ +PV DGG+ + KAL LGA+ V +G + S A G
Sbjct: 275 AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEG 319
>pdb|1GOX|A Chain A, Refined Structure Of Spinach Glycolate Oxidase At 2
Angstroms Resolution
Length = 370
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPG 391
AAQ +PV DGG+ + KAL LGA+ V +G + S A G
Sbjct: 276 AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEG 320
>pdb|2GJL|A Chain A, Crystal Structure Of 2-Nitropropane Dioxygenase
pdb|2GJN|A Chain A, Crystal Structure Of 2-Nitropropane Dioxygenase Complexed
With Fmn And Substrate
Length = 328
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 352 VPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAP 390
VP+IA GG ++ +V AL LGA + MG+ + E P
Sbjct: 173 VPIIASGGFADGRGLVAALALGADAINMGTRFLATRECP 211
>pdb|1KA9|F Chain F, Imidazole Glycerol Phosphate Synthase
Length = 252
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 287 YPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSI 346
+PE+ V GG V T A +E V G V +G+G I T + G + + +
Sbjct: 138 FPEVHVAGGRVPTGLHA---VEWAVKG--VELGAGEILLTS-MDRDGTKEGYDLRLTRMV 191
Query: 347 AAQSGVPVIADGGISNSGHIVKAL 370
A GVPVIA GG H ++A
Sbjct: 192 AEAVGVPVIASGGAGRMEHFLEAF 215
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 14/159 (8%)
Query: 280 IKYAKKTYPELDVIGGNVVTMYQAQNLIEAG--VDGLRVGMGSGS-ICTTQEVCAVGRGQ 336
+ AK+ P LDV G VV NL +AG V+ R +G+ ++ A +
Sbjct: 1 MSLAKRIVPCLDVHAGRVVKGVNFVNLRDAGDPVEAARAYDEAGADELVFLDISATHEER 60
Query: 337 ATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ 396
A + V+ +A + +P+ GG+ + K L+ GA V + S E
Sbjct: 61 AILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPEL------- 113
Query: 397 NGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVV 435
+++ +A+ D R+ GD ++ +A G V
Sbjct: 114 ----IRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRV 148
>pdb|2CDH|0 Chain 0, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|1 Chain 1, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|2 Chain 2, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|3 Chain 3, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|Y Chain Y, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|Z Chain Z, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 226
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPG 391
AAQ +PV DGG+ + KAL LGA+ V +G + S A G
Sbjct: 159 AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEG 203
>pdb|3SR7|A Chain A, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
pdb|3SR7|B Chain B, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
pdb|3SR7|C Chain C, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
pdb|3SR7|D Chain D, Crystal Structure Of S. Mutans Isopentenyl Pyrophosphate
Isomerase
Length = 365
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 335 GQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTV 377
GQ TA +++ V ++A GGI + I+KALVLGA V
Sbjct: 262 GQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAV 304
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate
Kinase In Complex With Citrate And Fbp.
pdb|4IP7|B Chain B, Structure Of The S12d Variant Of Human Liver Pyruvate
Kinase In Complex With Citrate And Fbp.
pdb|4IP7|C Chain C, Structure Of The S12d Variant Of Human Liver Pyruvate
Kinase In Complex With Citrate And Fbp.
pdb|4IP7|D Chain D, Structure Of The S12d Variant Of Human Liver Pyruvate
Kinase In Complex With Citrate And Fbp
Length = 543
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK 285
A IG ERL+ ++KAG+N+ L+ S G+ + E I ++
Sbjct: 61 ATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVRE 105
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant
pdb|2VGI|B Chain B, Human Erythrocyte Pyruvate Kinase: R486w Mutant
pdb|2VGI|C Chain C, Human Erythrocyte Pyruvate Kinase: R486w Mutant
pdb|2VGI|D Chain D, Human Erythrocyte Pyruvate Kinase: R486w Mutant
Length = 528
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK 285
A IG ERL+ ++KAG+N+ L+ S G+ + E I ++
Sbjct: 46 ATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVRE 90
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With
Citrate/mn/atp/fru-1,6-bp
pdb|4IMA|B Chain B, The Structure Of C436m-hlpyk In Complex With
Citrate/mn/atp/fru-1,6-bp
pdb|4IMA|C Chain C, The Structure Of C436m-hlpyk In Complex With
Citrate/mn/atp/fru-1,6-bp
pdb|4IMA|D Chain D, The Structure Of C436m-hlpyk In Complex With
Citrate/mn/atp/fru-1,6-bp
Length = 543
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK 285
A IG ERL+ ++KAG+N+ L+ S G+ + E I ++
Sbjct: 61 ATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVRE 105
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant
pdb|2VGF|B Chain B, Human Erythrocyte Pyruvate Kinase: T384m Mutant
pdb|2VGF|C Chain C, Human Erythrocyte Pyruvate Kinase: T384m Mutant
pdb|2VGF|D Chain D, Human Erythrocyte Pyruvate Kinase: T384m Mutant
Length = 528
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK 285
A IG ERL+ ++KAG+N+ L+ S G+ + E I ++
Sbjct: 46 ATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVRE 90
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant
pdb|2VGG|B Chain B, Human Erythrocyte Pyruvate Kinase: R479h Mutant
pdb|2VGG|C Chain C, Human Erythrocyte Pyruvate Kinase: R479h Mutant
pdb|2VGG|D Chain D, Human Erythrocyte Pyruvate Kinase: R479h Mutant
Length = 528
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK 285
A IG ERL+ ++KAG+N+ L+ S G+ + E I ++
Sbjct: 46 ATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVRE 90
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase
pdb|2VGB|B Chain B, Human Erythrocyte Pyruvate Kinase
pdb|2VGB|C Chain C, Human Erythrocyte Pyruvate Kinase
pdb|2VGB|D Chain D, Human Erythrocyte Pyruvate Kinase
Length = 528
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK 285
A IG ERL+ ++KAG+N+ L+ S G+ + E I ++
Sbjct: 46 ATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVRE 90
>pdb|2D0I|A Chain A, Crystal Structure Ph0520 Protein From Pyrococcus
Horikoshii Ot3
pdb|2D0I|B Chain B, Crystal Structure Ph0520 Protein From Pyrococcus
Horikoshii Ot3
pdb|2D0I|C Chain C, Crystal Structure Ph0520 Protein From Pyrococcus
Horikoshii Ot3
pdb|2D0I|D Chain D, Crystal Structure Ph0520 Protein From Pyrococcus
Horikoshii Ot3
Length = 333
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG- 222
VK++ + R NV IDE+LEK+D+ + L + ++ E V++L+G
Sbjct: 170 VKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK 229
Query: 223 -YPNLGKGTV 231
N+G+G +
Sbjct: 230 YLVNIGRGAL 239
>pdb|3IX0|A Chain A, Crystal Structure Of Human Seminal Plasma Protein Psp94
pdb|3IX0|B Chain B, Crystal Structure Of Human Seminal Plasma Protein Psp94
pdb|3IX0|C Chain C, Crystal Structure Of Human Seminal Plasma Protein Psp94
pdb|3IX0|D Chain D, Crystal Structure Of Human Seminal Plasma Protein Psp94
Length = 94
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 154 SDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEK 204
S+W+ + ++ C + VS P YD + +K D ++V+EK
Sbjct: 30 SEWQTDNCETCTCYETEISCCTLVSTPVGYDKDNCQRIFKKEDCKYIVVEK 80
>pdb|2IZ3|A Chain A, Solution Structure Of Human And Porcine Beta-
Microseminoprotein
Length = 97
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 154 SDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEK 204
S+W+ + ++ C + VS P YD + +K D ++V+EK
Sbjct: 33 SEWQTDNCETCTCYETEISCCTLVSTPVGYDKDNCQRIFKKEDCKYIVVEK 83
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Fbp, Pg, Mn2+ And K+
pdb|1A3W|B Chain B, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Fbp, Pg, Mn2+ And K+
pdb|1A3X|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Pg, Mn2+ And K+
pdb|1A3X|B Chain B, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Pg, Mn2+ And K+
Length = 500
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKT---YP 288
IG + ++ E L L KAG+N+V ++ S G+ + +I A+K+ YP
Sbjct: 27 IGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYP 75
>pdb|1TYG|A Chain A, Structure Of The Thiazole SynthaseTHIS COMPLEX
pdb|1TYG|C Chain C, Structure Of The Thiazole SynthaseTHIS COMPLEX
Length = 253
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 252 RLEHLVKAG-----VNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQ---- 302
R+ L KA + V V+ S+ +E +K +++ E G +V Y
Sbjct: 81 RIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEE-----GFIVLPYTSDDV 135
Query: 303 --AQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIADGG 359
A+ L E GV + G +G GQ +S I Q+ VPVI D G
Sbjct: 136 VLARKLEELGVHAIMPG-----------ASPIGSGQGILNPLNLSFIIEQAKVPVIVDAG 184
Query: 360 ISNSGHIVKALVLGASTVMMGSFLAGS 386
I + A+ LGA V++ + ++G+
Sbjct: 185 IGSPKDAAYAMELGADGVLLNTAVSGA 211
>pdb|1YNY|A Chain A, Molecular Structure Of D-Hydantoinase From A Bacillus Sp.
Ar9: Evidence For Mercury Inhibition
pdb|1YNY|B Chain B, Molecular Structure Of D-Hydantoinase From A Bacillus Sp.
Ar9: Evidence For Mercury Inhibition
Length = 461
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 84 IVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVF 136
+VH +C +A Q + A+ + ++ + + A D I D DF+G+ YV+
Sbjct: 237 VVHVSCASAVQR--IAEAREKGWNVYGETCPQYLALDVSIMDQPDFEGAKYVW 287
>pdb|1WV2|A Chain A, Crystal Structure Of Thiamine Biosynthesis Protein From
Pseudomonas Aeruginosa
pdb|1WV2|B Chain B, Crystal Structure Of Thiamine Biosynthesis Protein From
Pseudomonas Aeruginosa
Length = 265
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 19/126 (15%)
Query: 271 GNSSFQIEMIKYAKKTYPELDVIGGNVV-TMYQAQNLIEAGVDGL----------RVGMG 319
G++ ++E++ K +P NVV T+ A+ L++ G D + R
Sbjct: 102 GHNLVKLEVLADQKTLFP-------NVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAE 154
Query: 320 SGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378
G I +G G Y + I ++ VPV+ D G+ + A+ LG V+
Sbjct: 155 IGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVL 214
Query: 379 MGSFLA 384
M + +A
Sbjct: 215 MNTAIA 220
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2
pdb|1T5A|B Chain B, Human Pyruvate Kinase M2
pdb|1T5A|C Chain C, Human Pyruvate Kinase M2
pdb|1T5A|D Chain D, Human Pyruvate Kinase M2
Length = 567
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAK 284
IG E L+ ++K+G+NV L+ S G + E IK +
Sbjct: 87 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVR 128
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|B Chain B, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|C Chain C, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|D Chain D, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRH|A Chain A, Human M2 Pyruvate Kinase
pdb|3SRH|B Chain B, Human M2 Pyruvate Kinase
pdb|3SRH|C Chain C, Human M2 Pyruvate Kinase
pdb|3SRH|D Chain D, Human M2 Pyruvate Kinase
Length = 551
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 71 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 109
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
Length = 550
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 70 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 108
>pdb|2Z6J|A Chain A, Crystal Structure Of S. Pneumoniae Enoyl-acyl Carrier
Protein Reductase (fabk) In Complex With An Inhibitor
pdb|2Z6J|B Chain B, Crystal Structure Of S. Pneumoniae Enoyl-acyl Carrier
Protein Reductase (fabk) In Complex With An Inhibitor
Length = 332
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 335 GQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGS 381
G+ T + V +A +PVIA GGI++ +LGA V +G+
Sbjct: 146 GKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGT 192
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2)
pdb|4B2D|A Chain A, Human Pkm2 With L-serine And Fbp Bound.
pdb|4B2D|B Chain B, Human Pkm2 With L-serine And Fbp Bound.
pdb|4B2D|C Chain C, Human Pkm2 With L-serine And Fbp Bound
Length = 548
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 68 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 106
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound
Length = 548
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 68 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 106
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
Length = 533
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 53 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 91
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|B Chain B, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|C Chain C, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|D Chain D, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
Length = 533
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 53 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 91
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|B Chain B, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|C Chain C, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|D Chain D, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
Length = 530
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 50 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 88
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|B Chain B, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|C Chain C, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|D Chain D, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
Length = 518
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAK 284
IG E L+ ++K+G+NV L+ S G + E IK +
Sbjct: 38 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVR 79
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator
pdb|4G1N|B Chain B, Pkm2 In Complex With An Activator
pdb|4G1N|C Chain C, Pkm2 In Complex With An Activator
pdb|4G1N|D Chain D, Pkm2 In Complex With An Activator
Length = 518
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAK 284
IG E L+ ++K+G+NV L+ S G + E IK +
Sbjct: 38 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVR 79
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase
pdb|3SRF|A Chain A, Human M1 Pyruvate Kinase
pdb|3SRF|B Chain B, Human M1 Pyruvate Kinase
pdb|3SRF|D Chain D, Human M1 Pyruvate Kinase
pdb|3SRF|E Chain E, Human M1 Pyruvate Kinase
pdb|3SRF|F Chain F, Human M1 Pyruvate Kinase
pdb|3SRF|G Chain G, Human M1 Pyruvate Kinase
pdb|3SRF|H Chain H, Human M1 Pyruvate Kinase
Length = 551
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 71 IGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 109
>pdb|2DU2|A Chain A, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2DU2|B Chain B, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2DU2|C Chain C, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2DU2|D Chain D, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2E77|A Chain A, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2E77|B Chain B, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2E77|C Chain C, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2E77|D Chain D, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2ZFA|A Chain A, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus
Viridans
pdb|2ZFA|B Chain B, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus
Viridans
Length = 374
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 352 VPVIADGGISNSGHIVKALVLGASTVMMG 380
VP++ D G+ H+ KAL GA V +G
Sbjct: 291 VPIVFDSGVRRGEHVAKALASGADVVALG 319
>pdb|2NLI|A Chain A, Crystal Structure Of The Complex Between L-Lactate Oxidase
And A Substrate Analogue At 1.59 Angstrom Resolution
pdb|2NLI|B Chain B, Crystal Structure Of The Complex Between L-Lactate Oxidase
And A Substrate Analogue At 1.59 Angstrom Resolution
Length = 368
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 352 VPVIADGGISNSGHIVKALVLGASTVMMG 380
VP++ D G+ H+ KAL GA V +G
Sbjct: 285 VPIVFDSGVRRGEHVAKALASGADVVALG 313
>pdb|3PDI|B Chain B, Precursor Bound Nifen
pdb|3PDI|D Chain D, Precursor Bound Nifen
pdb|3PDI|F Chain F, Precursor Bound Nifen
pdb|3PDI|H Chain H, Precursor Bound Nifen
Length = 458
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG 295
R D E LEH +AG +V+ +S +S + + + +P+ D++GG
Sbjct: 360 RVGDLEDLEHAARAGQAQLVIGNSHALASARRLGVPLLRAGFPQYDLLGG 409
>pdb|2J6X|A Chain A, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|B Chain B, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|C Chain C, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|D Chain D, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|E Chain E, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|F Chain F, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|G Chain G, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|H Chain H, The Crystal Structure Of Lactate Oxidase
Length = 374
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 352 VPVIADGGISNSGHIVKALVLGASTVMMG 380
VP++ D G+ H+ KAL GA V +G
Sbjct: 291 VPIVFDSGVRRGEHVAKALASGADVVALG 319
>pdb|3EB2|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase From
Rhodopseudomonas Palustris At 2.0a Resolution
pdb|3EB2|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase From
Rhodopseudomonas Palustris At 2.0a Resolution
pdb|3EB2|C Chain C, Crystal Structure Of Dihydrodipicolinate Synthase From
Rhodopseudomonas Palustris At 2.0a Resolution
pdb|3EB2|D Chain D, Crystal Structure Of Dihydrodipicolinate Synthase From
Rhodopseudomonas Palustris At 2.0a Resolution
Length = 300
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 305 NLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIA 356
+LI+AGV GL +GS T E +G Q AV + + AAQ VPV+A
Sbjct: 33 DLIQAGVHGL-TPLGS-----TGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78
>pdb|2W0U|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate.
pdb|2W0U|B Chain B, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate.
pdb|2W0U|C Chain C, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate.
pdb|2W0U|D Chain D, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate
Length = 370
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
A + V V DGG+ ++KAL LGA V +G
Sbjct: 281 AVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 314
>pdb|2NZL|A Chain A, Crystal Structure Of Human Hydroxyacid Oxidase 1
Length = 392
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
A + V V DGG+ ++KAL LGA V +G
Sbjct: 303 AVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 336
>pdb|1XM3|A Chain A, Crystal Structure Of Northeast Structural Genomics Target
Sr156
pdb|1XM3|B Chain B, Crystal Structure Of Northeast Structural Genomics Target
Sr156
pdb|1XM3|C Chain C, Crystal Structure Of Northeast Structural Genomics Target
Sr156
pdb|1XM3|D Chain D, Crystal Structure Of Northeast Structural Genomics Target
Sr156
Length = 264
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 28/147 (19%)
Query: 252 RLEHLVKAG-----VNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQ---- 302
R+ L KA + V V+ S+ +E +K +++ E G +V Y
Sbjct: 83 RIARLAKASGLCDXIKVEVIGCSRSLLPDPVETLKASEQLLEE-----GFIVLPYTSDDV 137
Query: 303 --AQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIADGG 359
A+ L E GV + G +G GQ +S I Q+ VPVI D G
Sbjct: 138 VLARKLEELGVHAIXPG-----------ASPIGSGQGILNPLNLSFIIEQAKVPVIVDAG 186
Query: 360 ISNSGHIVKALVLGASTVMMGSFLAGS 386
I + A LGA V++ + ++G+
Sbjct: 187 IGSPKDAAYAXELGADGVLLNTAVSGA 213
>pdb|2AR0|A Chain A, Crystal Structure Of Type I Restriction Enzyme Ecoki M
Protein (Ec 2.1.1.72) (M.Ecoki)
pdb|2AR0|B Chain B, Crystal Structure Of Type I Restriction Enzyme Ecoki M
Protein (Ec 2.1.1.72) (M.Ecoki)
Length = 541
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 255 HLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNV 297
HL+K VV D + G + F IE +Y K +LD + G+
Sbjct: 163 HLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDT 205
>pdb|2RDT|A Chain A, Crystal Structure Of Human Glycolate Oxidase (Go) In
Complex With Cdst
pdb|2RDU|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
With Glyoxylate
pdb|2RDW|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
With Sulfate
Length = 387
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
A + V V DGG+ ++KAL LGA V +G
Sbjct: 298 AVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 331
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1)
Pyruvate Kinase, At A Resolution Of 2.6 Angstroms
Length = 530
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV L+ S G + E IK
Sbjct: 50 IGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIK 88
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|B Chain B, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|C Chain C, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|D Chain D, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|E Chain E, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|F Chain F, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|G Chain G, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|H Chain H, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
Length = 530
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV ++ S G + E IK
Sbjct: 50 IGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIK 88
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With
Mn2+, K+, And Pyruvate
Length = 530
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV ++ S G + E IK
Sbjct: 50 IGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIK 88
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|B Chain B, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|C Chain C, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|D Chain D, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|E Chain E, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|F Chain F, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|G Chain G, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|H Chain H, Recombinant Rabbit Muscle Pyruvate Kinase
Length = 530
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV ++ S G + E IK
Sbjct: 50 IGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIK 88
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|B Chain B, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|C Chain C, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|D Chain D, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|E Chain E, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|F Chain F, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|G Chain G, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|H Chain H, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1A5U|A Chain A, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|B Chain B, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|C Chain C, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|D Chain D, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|E Chain E, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|F Chain F, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|G Chain G, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|H Chain H, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A49|A Chain A, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|B Chain B, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|C Chain C, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|D Chain D, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|E Chain E, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|F Chain F, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|G Chain G, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|H Chain H, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
Length = 530
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV ++ S G + E IK
Sbjct: 50 IGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIK 88
>pdb|2Y7C|B Chain B, Atomic Model Of The Ocr-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534.
pdb|2Y7C|C Chain C, Atomic Model Of The Ocr-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534.
pdb|2Y7H|B Chain B, Atomic Model Of The Dna-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534.
pdb|2Y7H|C Chain C, Atomic Model Of The Dna-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534
Length = 529
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 255 HLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNV 297
HL+K VV D + G + F IE +Y K +LD + G+
Sbjct: 161 HLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDT 203
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|B Chain B, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|C Chain C, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|D Chain D, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|E Chain E, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|F Chain F, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|G Chain G, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|H Chain H, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
Length = 531
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV ++ S G + E IK
Sbjct: 51 IGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIK 89
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|B Chain B, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|C Chain C, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|D Chain D, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|E Chain E, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|F Chain F, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|G Chain G, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|H Chain H, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase
Length = 530
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIK 281
IG E L+ ++K+G+NV ++ S G + E IK
Sbjct: 50 IGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIK 88
>pdb|1TB3|A Chain A, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|B Chain B, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|C Chain C, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|D Chain D, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|E Chain E, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|F Chain F, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|G Chain G, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|H Chain H, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
Length = 352
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
A + + V DGG+ ++KAL LGA + +G
Sbjct: 268 AVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301
>pdb|3SGZ|A Chain A, High Resolution Crystal Structure Of Rat Long Chain
Hydroxy Acid Oxidase In Complex With The Inhibitor
4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
3-Thiadiazole.
pdb|3SGZ|B Chain B, High Resolution Crystal Structure Of Rat Long Chain
Hydroxy Acid Oxidase In Complex With The Inhibitor
4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
3-Thiadiazole.
pdb|3SGZ|C Chain C, High Resolution Crystal Structure Of Rat Long Chain
Hydroxy Acid Oxidase In Complex With The Inhibitor
4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
3-Thiadiazole
Length = 352
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 347 AAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380
A + + V DGG+ ++KAL LGA + +G
Sbjct: 268 AVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301
>pdb|3CTD|A Chain A, Crystal Structure Of A Putative Aaa Family Atpase From
Prochlorococcus Marinus Subsp. Pastoris
pdb|3CTD|B Chain B, Crystal Structure Of A Putative Aaa Family Atpase From
Prochlorococcus Marinus Subsp. Pastoris
Length = 213
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 262 NVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNV---------VTMYQAQNLIEAGVD 312
N+VV+D + S Q + I Y K DVI + T+Y N++EAG D
Sbjct: 8 NLVVIDLAIAEDSIQKKNIVYDKNGQNHFDVISAFIKSIRGSDPDATLYWLANMVEAGED 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,836,043
Number of Sequences: 62578
Number of extensions: 640425
Number of successful extensions: 2051
Number of sequences better than 100.0: 113
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1886
Number of HSP's gapped (non-prelim): 130
length of query: 505
length of database: 14,973,337
effective HSP length: 103
effective length of query: 402
effective length of database: 8,527,803
effective search space: 3428176806
effective search space used: 3428176806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)