Query 010640
Match_columns 505
No_of_seqs 428 out of 3810
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:08:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4af0_A Inosine-5'-monophosphat 100.0 1E-107 4E-112 843.8 37.8 494 4-505 38-555 (556)
2 4fxs_A Inosine-5'-monophosphat 100.0 1.8E-88 6.2E-93 720.3 39.1 464 23-499 10-479 (496)
3 4avf_A Inosine-5'-monophosphat 100.0 1E-86 3.6E-91 706.4 33.4 463 23-499 9-480 (490)
4 3usb_A Inosine-5'-monophosphat 100.0 2.4E-85 8.4E-90 698.6 42.6 465 23-499 34-502 (511)
5 1me8_A Inosine-5'-monophosphat 100.0 5.9E-80 2E-84 658.1 34.5 468 17-502 4-496 (503)
6 1jcn_A Inosine monophosphate d 100.0 2.6E-79 9E-84 656.7 35.0 496 5-505 11-514 (514)
7 2cu0_A Inosine-5'-monophosphat 100.0 1.3E-75 4.4E-80 623.4 34.6 470 11-503 2-478 (486)
8 1vrd_A Inosine-5'-monophosphat 100.0 6.3E-75 2.2E-79 620.4 33.1 468 23-503 16-487 (494)
9 1zfj_A Inosine monophosphate d 100.0 7.3E-72 2.5E-76 596.7 44.0 475 12-503 3-486 (491)
10 3ffs_A Inosine-5-monophosphate 100.0 1.5E-69 5.3E-74 554.7 30.5 381 23-499 9-391 (400)
11 4fo4_A Inosine 5'-monophosphat 100.0 7.6E-65 2.6E-69 516.1 33.1 343 23-500 13-357 (366)
12 3khj_A Inosine-5-monophosphate 100.0 5E-62 1.7E-66 496.6 32.3 339 23-499 12-352 (361)
13 3r2g_A Inosine 5'-monophosphat 100.0 9.2E-59 3.1E-63 468.5 26.7 327 23-499 7-338 (361)
14 2c6q_A GMP reductase 2; TIM ba 100.0 3.9E-49 1.3E-53 400.8 33.9 322 23-487 19-349 (351)
15 1eep_A Inosine 5'-monophosphat 100.0 1.9E-49 6.6E-54 412.7 31.9 393 23-501 9-404 (404)
16 1ypf_A GMP reductase; GUAC, pu 100.0 1.1E-40 3.7E-45 338.1 24.4 317 23-493 13-334 (336)
17 2qr6_A IMP dehydrogenase/GMP r 100.0 4E-31 1.4E-35 273.9 25.3 322 23-473 35-388 (393)
18 3sr7_A Isopentenyl-diphosphate 99.9 4.2E-23 1.4E-27 209.3 19.9 170 252-473 160-351 (365)
19 3vkj_A Isopentenyl-diphosphate 99.9 7E-22 2.4E-26 201.1 21.1 145 275-473 174-339 (368)
20 2nli_A Lactate oxidase; flavoe 99.9 2E-20 6.7E-25 191.0 24.8 143 274-473 215-357 (368)
21 3sgz_A Hydroxyacid oxidase 2; 99.8 7.1E-20 2.4E-24 184.0 19.8 144 274-474 203-346 (352)
22 1p4c_A L(+)-mandelate dehydrog 99.8 2.8E-19 9.5E-24 183.5 22.1 158 276-501 213-370 (380)
23 1p0k_A Isopentenyl-diphosphate 99.8 2.9E-19 9.9E-24 182.0 21.7 168 254-473 134-324 (349)
24 2nzl_A Hydroxyacid oxidase 1; 99.8 2E-19 6.8E-24 184.8 19.3 144 275-475 239-382 (392)
25 1kbi_A Cytochrome B2, L-LCR; f 99.8 1.5E-18 5.3E-23 183.9 23.3 143 276-474 331-477 (511)
26 1vcf_A Isopentenyl-diphosphate 99.8 5.4E-19 1.9E-23 178.7 18.8 145 275-473 169-328 (332)
27 1gox_A (S)-2-hydroxy-acid oxid 99.8 1.7E-18 5.8E-23 177.2 19.9 142 276-474 213-354 (370)
28 3bo9_A Putative nitroalkan dio 99.7 5E-17 1.7E-21 163.7 20.7 209 42-397 12-222 (326)
29 2gjl_A Hypothetical protein PA 99.7 7.4E-16 2.5E-20 155.5 19.4 132 249-396 85-217 (328)
30 4esy_A CBS domain containing m 99.7 6.7E-17 2.3E-21 147.2 10.0 114 103-223 19-162 (170)
31 1ea0_A Glutamate synthase [NAD 99.7 9.5E-17 3.3E-21 183.6 11.0 170 274-473 978-1164(1479)
32 3bw2_A 2-nitropropane dioxygen 99.7 3.3E-15 1.1E-19 153.1 20.9 138 249-396 111-253 (369)
33 2uva_G Fatty acid synthase bet 99.7 1.8E-16 6.3E-21 189.8 12.7 222 40-397 567-812 (2060)
34 2z6i_A Trans-2-enoyl-ACP reduc 99.7 2.4E-15 8.2E-20 151.9 18.3 130 249-396 77-207 (332)
35 1ofd_A Ferredoxin-dependent gl 99.6 2.5E-16 8.5E-21 180.5 11.6 170 274-473 1013-1199(1520)
36 1vr9_A CBS domain protein/ACT 99.6 3.7E-16 1.3E-20 147.9 10.5 160 102-273 13-176 (213)
37 3lhh_A CBS domain protein; str 99.6 7.6E-16 2.6E-20 140.5 10.2 114 102-223 42-164 (172)
38 3jtf_A Magnesium and cobalt ef 99.6 1.9E-15 6.5E-20 130.9 9.3 109 106-222 9-125 (129)
39 3lfr_A Putative metal ION tran 99.6 2E-15 6.7E-20 132.2 8.8 109 106-222 7-126 (136)
40 3lv9_A Putative transporter; C 99.6 1.6E-15 5.5E-20 134.5 8.2 112 103-222 24-144 (148)
41 3nqr_A Magnesium and cobalt ef 99.6 2E-15 6.9E-20 130.3 8.5 108 106-221 7-124 (127)
42 3i8n_A Uncharacterized protein 99.6 1.5E-15 5.3E-20 131.6 7.7 113 103-221 7-127 (130)
43 3k6e_A CBS domain protein; str 99.6 1.4E-15 4.8E-20 136.7 7.5 114 102-222 15-141 (156)
44 3kpb_A Uncharacterized protein 99.6 2.3E-15 7.9E-20 128.5 6.4 110 106-222 5-119 (122)
45 3oi8_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 129.9 10.8 109 103-219 39-156 (156)
46 3kxr_A Magnesium transporter, 99.6 2.3E-14 7.8E-19 134.8 12.7 122 93-222 40-173 (205)
47 3hf7_A Uncharacterized CBS-dom 99.6 3.1E-15 1E-19 130.0 6.1 110 106-222 6-126 (130)
48 3k2v_A Putative D-arabinose 5- 99.5 8.6E-15 2.9E-19 130.0 8.8 112 102-220 28-149 (149)
49 4gqw_A CBS domain-containing p 99.5 8.4E-15 2.9E-19 129.7 8.5 114 103-223 6-143 (152)
50 2rih_A Conserved protein with 99.5 8.8E-15 3E-19 128.5 8.6 111 103-221 6-126 (141)
51 3gby_A Uncharacterized protein 99.5 6.3E-15 2.1E-19 127.3 7.3 112 103-222 6-125 (128)
52 2o16_A Acetoin utilization pro 99.5 9.5E-15 3.3E-19 131.5 8.4 112 103-221 6-133 (160)
53 3oco_A Hemolysin-like protein 99.5 5.1E-15 1.7E-19 132.2 5.5 114 103-223 21-143 (153)
54 3sl7_A CBS domain-containing p 99.5 7.5E-15 2.6E-19 134.1 6.6 111 105-222 7-155 (180)
55 1y5h_A Hypothetical protein RV 99.5 6.6E-15 2.3E-19 127.8 5.8 112 103-221 9-129 (133)
56 3ocm_A Putative membrane prote 99.5 2.2E-14 7.7E-19 131.1 9.1 115 102-223 36-157 (173)
57 3fhm_A Uncharacterized protein 99.5 1.6E-14 5.3E-19 130.7 7.7 111 106-223 28-150 (165)
58 3fv6_A YQZB protein; CBS domai 99.5 2.3E-14 7.8E-19 128.7 8.5 114 103-222 18-143 (159)
59 3ctu_A CBS domain protein; str 99.5 2.2E-14 7.7E-19 128.1 7.9 113 102-223 15-142 (156)
60 2ef7_A Hypothetical protein ST 99.5 3.8E-14 1.3E-18 122.9 9.0 112 103-222 5-124 (133)
61 3lqn_A CBS domain protein; csg 99.5 2.1E-14 7E-19 127.4 7.4 111 103-222 16-142 (150)
62 2uv8_G Fatty acid synthase sub 99.5 3.8E-14 1.3E-18 168.9 11.7 220 43-397 577-819 (2051)
63 2rc3_A CBS domain; in SITU pro 99.5 3.5E-14 1.2E-18 123.6 8.3 111 104-222 8-130 (135)
64 2yzi_A Hypothetical protein PH 99.5 5.5E-14 1.9E-18 122.7 9.6 113 103-223 8-129 (138)
65 1pbj_A Hypothetical protein; s 99.5 3.5E-14 1.2E-18 121.5 8.0 109 106-222 5-121 (125)
66 1pvm_A Conserved hypothetical 99.5 4.1E-14 1.4E-18 130.3 8.7 112 103-221 10-131 (184)
67 2p9m_A Hypothetical protein MJ 99.5 4.2E-14 1.4E-18 123.4 7.6 112 103-221 9-134 (138)
68 2emq_A Hypothetical conserved 99.5 7.2E-14 2.5E-18 124.8 8.6 113 102-223 11-139 (157)
69 2nyc_A Nuclear protein SNF4; b 99.5 6.1E-14 2.1E-18 123.0 7.6 111 107-222 16-140 (144)
70 3org_A CMCLC; transporter, tra 99.5 9E-15 3.1E-19 159.9 1.6 163 45-223 397-625 (632)
71 2uv4_A 5'-AMP-activated protei 99.5 1.1E-13 3.6E-18 123.3 8.1 105 110-221 29-149 (152)
72 3l2b_A Probable manganase-depe 99.4 9.7E-14 3.3E-18 133.8 7.9 112 103-221 8-242 (245)
73 2j9l_A Chloride channel protei 99.4 9.6E-14 3.3E-18 127.4 6.8 113 103-222 12-164 (185)
74 1o50_A CBS domain-containing p 99.4 2.1E-13 7.1E-18 122.1 8.5 111 103-222 17-152 (157)
75 4fry_A Putative signal-transdu 99.4 1E-13 3.4E-18 124.0 6.3 104 115-224 24-136 (157)
76 1yav_A Hypothetical protein BS 99.4 7E-14 2.4E-18 125.4 4.8 109 105-222 17-141 (159)
77 2pfi_A Chloride channel protei 99.4 1.5E-13 5.3E-18 123.3 6.9 113 105-222 16-146 (164)
78 2yzq_A Putative uncharacterize 99.4 7.8E-13 2.7E-17 129.5 11.5 112 104-222 128-278 (282)
79 2d4z_A Chloride channel protei 99.4 3.6E-13 1.2E-17 130.2 8.3 116 102-222 13-245 (250)
80 1ep3_A Dihydroorotate dehydrog 99.4 6.1E-12 2.1E-16 125.6 17.4 170 247-475 111-307 (311)
81 2yvy_A MGTE, Mg2+ transporter 99.4 1.2E-12 4.1E-17 128.8 10.8 110 105-222 138-256 (278)
82 2zy9_A Mg2+ transporter MGTE; 99.4 1.1E-12 3.8E-17 138.5 11.3 122 93-222 141-276 (473)
83 2oux_A Magnesium transporter; 99.4 1.3E-12 4.3E-17 129.2 11.0 120 95-222 125-258 (286)
84 3zen_D Fatty acid synthase; tr 99.4 2.7E-12 9.2E-17 158.3 14.9 137 250-397 504-663 (3089)
85 3t4n_C Nuclear protein SNF4; C 99.4 1.4E-12 4.7E-17 130.6 9.9 110 108-222 196-319 (323)
86 3kh5_A Protein MJ1225; AMPK, A 99.3 8.7E-13 3E-17 128.8 7.6 111 103-221 149-279 (280)
87 1jub_A Dihydroorotate dehydrog 99.3 4E-12 1.4E-16 127.1 12.5 170 246-473 105-307 (311)
88 3ddj_A CBS domain-containing p 99.3 4.6E-12 1.6E-16 125.1 11.8 113 103-222 94-213 (296)
89 3ddj_A CBS domain-containing p 99.3 7.9E-13 2.7E-17 130.7 6.0 110 106-222 160-284 (296)
90 2e6f_A Dihydroorotate dehydrog 99.3 4E-12 1.4E-16 127.3 11.2 171 246-474 105-310 (314)
91 3kh5_A Protein MJ1225; AMPK, A 99.3 8.2E-12 2.8E-16 121.9 11.8 152 107-267 9-185 (280)
92 2qrd_G Protein C1556.08C; AMPK 99.3 6.5E-12 2.2E-16 126.3 9.5 112 107-223 190-315 (334)
93 2yzq_A Putative uncharacterize 99.3 1.4E-11 4.9E-16 120.5 11.1 151 106-267 5-163 (282)
94 3pc3_A CG1753, isoform A; CBS, 99.2 5.4E-12 1.9E-16 135.2 6.5 112 103-223 385-511 (527)
95 1gte_A Dihydropyrimidine dehyd 99.2 1.8E-10 6E-15 132.7 19.5 169 246-472 647-851 (1025)
96 2v8q_E 5'-AMP-activated protei 99.2 2.3E-11 7.8E-16 122.1 10.0 107 110-223 201-323 (330)
97 3t4n_C Nuclear protein SNF4; C 99.2 3.7E-11 1.3E-15 120.2 9.9 117 99-222 111-247 (323)
98 3i65_A Dihydroorotate dehydrog 99.2 2.2E-10 7.5E-15 117.3 15.2 167 249-473 201-410 (415)
99 3zwt_A Dihydroorotate dehydrog 99.2 3.9E-10 1.3E-14 114.7 16.9 158 259-473 175-363 (367)
100 1tv5_A Dhodehase, dihydroorota 99.2 2.8E-10 9.5E-15 118.0 14.8 128 289-473 296-438 (443)
101 4ef8_A Dihydroorotate dehydrog 99.2 2.1E-10 7.2E-15 115.8 13.2 171 246-474 138-343 (354)
102 3q58_A N-acetylmannosamine-6-p 99.1 4.5E-10 1.6E-14 106.9 14.4 125 249-385 90-215 (229)
103 3oix_A Putative dihydroorotate 99.1 2.8E-10 9.5E-15 114.6 13.1 171 245-473 139-340 (345)
104 3igs_A N-acetylmannosamine-6-p 99.1 9.9E-10 3.4E-14 104.8 14.8 124 249-384 90-214 (232)
105 2v8q_E 5'-AMP-activated protei 99.1 3.2E-10 1.1E-14 113.7 11.9 112 105-222 121-250 (330)
106 1zfj_A Inosine monophosphate d 99.1 4.6E-09 1.6E-13 111.4 21.2 196 165-381 91-303 (491)
107 1y0e_A Putative N-acetylmannos 99.0 5.1E-09 1.7E-13 99.2 16.2 130 250-385 78-209 (223)
108 1f76_A Dihydroorotate dehydrog 99.0 3.1E-09 1.1E-13 107.2 15.0 135 249-384 155-322 (336)
109 2qrd_G Protein C1556.08C; AMPK 99.0 1.3E-09 4.5E-14 109.3 11.4 110 108-222 113-242 (334)
110 4e38_A Keto-hydroxyglutarate-a 98.9 3.8E-08 1.3E-12 93.1 16.7 110 245-379 44-153 (232)
111 1vhn_A Putative flavin oxidore 98.9 5.3E-09 1.8E-13 104.7 10.7 178 246-473 70-270 (318)
112 3usb_A Inosine-5'-monophosphat 98.9 1.6E-08 5.5E-13 107.4 14.8 191 107-317 180-388 (511)
113 1yxy_A Putative N-acetylmannos 98.9 2E-08 6.7E-13 95.9 13.8 127 249-384 90-219 (234)
114 1me8_A Inosine-5'-monophosphat 98.8 7.1E-09 2.4E-13 110.1 10.7 194 104-317 163-381 (503)
115 4avf_A Inosine-5'-monophosphat 98.8 5.5E-09 1.9E-13 110.5 9.0 195 165-380 89-298 (490)
116 3tsm_A IGPS, indole-3-glycerol 98.8 1.8E-07 6.2E-12 90.7 18.3 181 178-386 74-255 (272)
117 1vrd_A Inosine-5'-monophosphat 98.8 6.4E-09 2.2E-13 110.4 8.3 197 165-381 96-307 (494)
118 3lab_A Putative KDPG (2-keto-3 98.8 9.2E-08 3.1E-12 89.1 14.4 110 245-379 23-138 (217)
119 4fxs_A Inosine-5'-monophosphat 98.8 1E-08 3.5E-13 108.5 8.7 194 165-380 90-300 (496)
120 3b0p_A TRNA-dihydrouridine syn 98.7 1.7E-07 5.8E-12 94.8 16.4 135 246-386 69-231 (350)
121 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 9.9E-08 3.4E-12 89.1 12.2 135 246-385 21-183 (205)
122 3tjx_A Dihydroorotate dehydrog 98.7 1.3E-07 4.5E-12 95.9 12.8 162 255-474 150-343 (354)
123 3qja_A IGPS, indole-3-glycerol 98.7 2.2E-07 7.7E-12 90.4 13.6 180 179-386 68-248 (272)
124 4af0_A Inosine-5'-monophosphat 98.6 1.2E-07 4.1E-12 98.7 11.3 191 103-317 201-413 (556)
125 1vzw_A Phosphoribosyl isomeras 98.6 6.2E-08 2.1E-12 93.0 8.5 175 184-385 33-227 (244)
126 3ghd_A A cystathionine beta-sy 98.6 2.5E-08 8.7E-13 76.4 4.5 59 115-179 3-70 (70)
127 2y88_A Phosphoribosyl isomeras 98.6 8.3E-08 2.8E-12 92.0 8.7 175 184-386 32-231 (244)
128 1wv2_A Thiazole moeity, thiazo 98.6 9.5E-07 3.3E-11 83.7 14.1 125 249-385 89-221 (265)
129 4esy_A CBS domain containing m 98.5 5.1E-07 1.8E-11 81.3 10.9 58 163-222 17-75 (170)
130 3tdn_A FLR symmetric alpha-bet 98.5 1.6E-07 5.6E-12 90.3 7.6 137 248-385 36-234 (247)
131 1vhc_A Putative KHG/KDPG aldol 98.5 4.3E-06 1.5E-10 79.0 17.0 109 246-379 28-136 (224)
132 1vr9_A CBS domain protein/ACT 98.5 3.3E-08 1.1E-12 92.9 2.2 135 104-271 74-212 (213)
133 1thf_D HISF protein; thermophI 98.5 1E-06 3.6E-11 84.8 12.8 178 182-385 29-229 (253)
134 1z41_A YQJM, probable NADH-dep 98.5 1.1E-06 3.9E-11 88.4 13.6 132 248-386 145-313 (338)
135 3l2b_A Probable manganase-depe 98.5 1.5E-06 5E-11 83.2 13.6 136 163-305 6-180 (245)
136 2nv1_A Pyridoxal biosynthesis 98.5 2.4E-07 8.3E-12 92.0 8.0 182 184-385 29-243 (305)
137 3gr7_A NADPH dehydrogenase; fl 98.5 1.7E-06 5.7E-11 87.1 14.2 131 248-385 145-312 (340)
138 4adt_A Pyridoxine biosynthetic 98.4 7.5E-08 2.6E-12 94.6 3.8 129 250-386 90-244 (297)
139 1h5y_A HISF; histidine biosynt 98.4 3.6E-06 1.2E-10 80.5 15.4 135 247-385 33-232 (253)
140 3ghd_A A cystathionine beta-sy 98.4 3.3E-07 1.1E-11 70.1 6.4 48 175-222 1-48 (70)
141 3hgj_A Chromate reductase; TIM 98.4 1.5E-06 5E-11 88.0 13.1 133 248-385 153-323 (349)
142 1jcn_A Inosine monophosphate d 98.4 8.8E-07 3E-11 94.3 11.6 188 104-317 175-387 (514)
143 1vc4_A Indole-3-glycerol phosp 98.4 3.1E-06 1.1E-10 81.6 14.3 177 180-386 63-242 (254)
144 1ka9_F Imidazole glycerol phos 98.4 3.1E-06 1.1E-10 81.4 14.3 178 182-385 30-230 (252)
145 1yad_A Regulatory protein TENI 98.4 1.8E-06 6.1E-11 81.5 12.2 118 253-386 81-198 (221)
146 2cu0_A Inosine-5'-monophosphat 98.4 8.3E-07 2.8E-11 93.9 10.4 187 104-317 152-357 (486)
147 2w6r_A Imidazole glycerol phos 98.4 3.2E-06 1.1E-10 81.9 13.8 179 184-386 31-235 (266)
148 1geq_A Tryptophan synthase alp 98.4 6.8E-06 2.3E-10 78.8 15.6 135 248-384 20-224 (248)
149 1wbh_A KHG/KDPG aldolase; lyas 98.3 1E-05 3.5E-10 75.8 15.6 109 246-379 27-135 (214)
150 1mzh_A Deoxyribose-phosphate a 98.3 1.4E-05 4.7E-10 75.6 15.4 119 251-382 74-206 (225)
151 3k6e_A CBS domain protein; str 98.3 6.3E-07 2.2E-11 79.8 5.6 59 164-222 15-74 (156)
152 3f4w_A Putative hexulose 6 pho 98.3 1E-05 3.5E-10 75.6 14.0 123 250-385 67-192 (211)
153 2htm_A Thiazole biosynthesis p 98.3 2.7E-06 9.2E-11 80.8 9.6 88 289-385 124-212 (268)
154 1mxs_A KDPG aldolase; 2-keto-3 98.3 1.3E-05 4.3E-10 75.8 14.3 109 246-379 37-145 (225)
155 3lv9_A Putative transporter; C 98.3 3.2E-06 1.1E-10 74.0 9.4 106 162-271 21-128 (148)
156 3l5l_A Xenobiotic reductase A; 98.3 4.2E-06 1.4E-10 85.0 11.5 133 248-385 159-330 (363)
157 1qop_A Tryptophan synthase alp 98.2 1.6E-05 5.5E-10 77.2 14.8 135 247-384 31-238 (268)
158 3jtf_A Magnesium and cobalt ef 98.2 3.5E-06 1.2E-10 72.0 8.7 100 163-267 4-105 (129)
159 3o07_A Pyridoxine biosynthesis 98.2 7.2E-07 2.4E-11 85.1 4.3 127 250-385 80-234 (291)
160 1xm3_A Thiazole biosynthesis p 98.2 1E-05 3.4E-10 78.5 12.3 126 251-386 83-213 (264)
161 2zbt_A Pyridoxal biosynthesis 98.2 1.2E-06 4.2E-11 86.5 6.0 128 250-385 90-243 (297)
162 3vnd_A TSA, tryptophan synthas 98.2 2.5E-05 8.5E-10 75.6 14.6 138 247-384 32-239 (267)
163 3kpb_A Uncharacterized protein 98.2 2.9E-06 9.9E-11 71.4 7.2 98 165-269 2-101 (122)
164 3kru_A NADH:flavin oxidoreduct 98.2 1.3E-05 4.5E-10 80.5 13.1 132 248-386 144-313 (343)
165 2v82_A 2-dehydro-3-deoxy-6-pho 98.2 8.8E-06 3E-10 76.1 11.1 110 250-385 70-181 (212)
166 3gby_A Uncharacterized protein 98.2 3E-06 1E-10 72.2 7.2 100 163-267 4-105 (128)
167 1jvn_A Glutamine, bifunctional 98.2 2.5E-05 8.4E-10 83.7 15.9 182 184-384 281-530 (555)
168 1qo2_A Molecule: N-((5-phospho 98.2 1.2E-05 4.2E-10 76.7 12.1 174 183-385 30-228 (241)
169 3fio_A A cystathionine beta-sy 98.2 3.2E-06 1.1E-10 63.9 6.4 48 175-222 1-48 (70)
170 3nqr_A Magnesium and cobalt ef 98.2 4.2E-06 1.4E-10 71.2 7.8 101 164-267 3-105 (127)
171 1vyr_A Pentaerythritol tetrani 98.2 1.7E-05 5.9E-10 80.4 13.6 127 248-386 162-329 (364)
172 2ekc_A AQ_1548, tryptophan syn 98.1 3.3E-05 1.1E-09 74.8 14.7 136 248-384 32-238 (262)
173 3lhh_A CBS domain protein; str 98.1 6.5E-06 2.2E-10 74.2 9.0 102 163-268 41-144 (172)
174 1i4n_A Indole-3-glycerol phosp 98.1 3.5E-05 1.2E-09 73.7 14.3 177 180-386 58-236 (251)
175 4gj1_A 1-(5-phosphoribosyl)-5- 98.1 2E-05 6.7E-10 75.5 12.6 133 247-383 31-227 (243)
176 2ef7_A Hypothetical protein ST 98.1 9.3E-06 3.2E-10 69.4 9.3 102 163-268 3-105 (133)
177 3lfr_A Putative metal ION tran 98.1 8.6E-06 2.9E-10 70.3 9.2 102 163-267 2-106 (136)
178 3i8n_A Uncharacterized protein 98.1 2.5E-06 8.5E-11 73.0 5.5 60 163-222 5-66 (130)
179 3fio_A A cystathionine beta-sy 98.1 1.7E-06 5.9E-11 65.4 3.8 58 115-178 3-69 (70)
180 3k2v_A Putative D-arabinose 5- 98.1 5.9E-06 2E-10 72.4 7.6 59 164-222 28-87 (149)
181 2yw3_A 4-hydroxy-2-oxoglutarat 98.1 2.1E-05 7.3E-10 73.3 11.6 123 236-385 62-184 (207)
182 2fli_A Ribulose-phosphate 3-ep 98.1 3.8E-05 1.3E-09 72.1 13.4 182 183-385 16-203 (220)
183 1pii_A N-(5'phosphoribosyl)ant 98.1 6.1E-05 2.1E-09 78.0 16.0 176 180-385 65-241 (452)
184 2rih_A Conserved protein with 98.1 2.2E-05 7.7E-10 67.8 11.0 99 164-267 5-107 (141)
185 2gou_A Oxidoreductase, FMN-bin 98.1 2.9E-05 1E-09 78.8 13.2 127 248-386 162-328 (365)
186 4e38_A Keto-hydroxyglutarate-a 98.1 1.3E-05 4.4E-10 75.7 9.8 121 237-384 86-206 (232)
187 2yzi_A Hypothetical protein PH 98.1 2.3E-05 7.7E-10 67.4 10.5 98 163-264 6-106 (138)
188 3hf7_A Uncharacterized CBS-dom 98.1 2.8E-06 9.5E-11 72.9 4.5 59 164-222 2-62 (130)
189 1ps9_A 2,4-dienoyl-COA reducta 98.0 2.3E-05 7.8E-10 86.2 12.4 137 248-386 142-316 (671)
190 3ctu_A CBS domain protein; str 98.0 3.9E-06 1.3E-10 74.1 4.8 60 163-222 14-74 (156)
191 4ab4_A Xenobiotic reductase B; 98.0 5.6E-05 1.9E-09 76.4 13.6 121 248-386 154-314 (362)
192 1rd5_A Tryptophan synthase alp 98.0 6.2E-05 2.1E-09 72.8 13.4 120 256-385 114-235 (262)
193 3oi8_A Uncharacterized protein 98.0 6.1E-06 2.1E-10 73.1 5.7 60 163-222 37-98 (156)
194 3fv6_A YQZB protein; CBS domai 98.0 2.8E-05 9.5E-10 68.9 10.0 56 163-221 16-72 (159)
195 3o63_A Probable thiamine-phosp 98.0 2.6E-05 9.1E-10 74.4 10.3 117 256-386 108-225 (243)
196 3jr2_A Hexulose-6-phosphate sy 98.0 5.9E-05 2E-09 70.9 12.6 125 249-384 72-198 (218)
197 3gka_A N-ethylmaleimide reduct 98.0 3.7E-05 1.3E-09 77.7 11.8 121 248-386 162-322 (361)
198 3ngj_A Deoxyribose-phosphate a 98.0 9E-05 3.1E-09 70.0 13.6 122 249-381 97-230 (239)
199 2d4z_A Chloride channel protei 98.0 6.7E-06 2.3E-10 79.1 6.0 58 163-222 12-72 (250)
200 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 0.00018 6E-09 67.1 15.5 108 245-379 23-130 (207)
201 2o16_A Acetoin utilization pro 98.0 6.8E-06 2.3E-10 73.0 5.6 58 163-222 4-62 (160)
202 3oa3_A Aldolase; structural ge 98.0 0.00015 5E-09 70.2 15.2 123 249-381 128-264 (288)
203 1pbj_A Hypothetical protein; s 98.0 7.9E-06 2.7E-10 68.9 5.7 55 165-221 2-56 (125)
204 3lqn_A CBS domain protein; csg 98.0 4.5E-06 1.5E-10 73.1 4.2 60 163-222 14-74 (150)
205 4gqw_A CBS domain-containing p 98.0 2.5E-05 8.6E-10 68.0 9.0 58 163-220 4-62 (152)
206 2r14_A Morphinone reductase; H 98.0 3.2E-05 1.1E-09 78.8 11.0 128 248-386 167-334 (377)
207 2hsa_B 12-oxophytodienoate red 98.0 6.2E-05 2.1E-09 77.3 13.1 137 248-386 172-354 (402)
208 3oco_A Hemolysin-like protein 97.9 6.4E-06 2.2E-10 72.6 4.8 101 163-267 19-122 (153)
209 1xi3_A Thiamine phosphate pyro 97.9 6.9E-05 2.4E-09 69.8 12.2 117 253-386 79-196 (215)
210 3ocm_A Putative membrane prote 97.9 1.1E-05 3.8E-10 72.9 6.4 100 162-266 34-135 (173)
211 1icp_A OPR1, 12-oxophytodienoa 97.9 4E-05 1.4E-09 78.1 11.2 129 248-386 168-336 (376)
212 2p9m_A Hypothetical protein MJ 97.9 1.1E-05 3.7E-10 69.3 5.8 58 163-222 7-66 (138)
213 1pvm_A Conserved hypothetical 97.9 5.4E-05 1.8E-09 68.8 9.8 57 164-222 9-66 (184)
214 2emq_A Hypothetical conserved 97.9 1.1E-05 3.8E-10 71.0 5.0 60 163-222 10-70 (157)
215 2rc3_A CBS domain; in SITU pro 97.9 1.4E-05 5E-10 68.4 5.4 54 165-220 7-63 (135)
216 3nav_A Tryptophan synthase alp 97.9 0.00027 9.2E-09 68.4 14.9 123 249-384 114-241 (271)
217 1yav_A Hypothetical protein BS 97.9 9.8E-06 3.3E-10 71.7 4.4 60 163-222 13-73 (159)
218 4a29_A Engineered retro-aldol 97.8 8.9E-05 3E-09 70.3 11.1 174 185-387 66-240 (258)
219 2qjg_A Putative aldolase MJ040 97.8 0.00011 3.8E-09 71.4 12.0 119 250-386 102-243 (273)
220 3l5a_A NADH/flavin oxidoreduct 97.8 0.00013 4.4E-09 75.3 13.1 133 248-385 171-351 (419)
221 1y5h_A Hypothetical protein RV 97.8 1.1E-05 3.8E-10 68.9 3.9 54 164-219 8-62 (133)
222 1o50_A CBS domain-containing p 97.8 2.6E-05 8.7E-10 68.9 6.3 58 162-221 14-72 (157)
223 1ujp_A Tryptophan synthase alp 97.8 0.00016 5.4E-09 70.2 12.3 133 248-384 31-233 (271)
224 2nyc_A Nuclear protein SNF4; b 97.8 2.6E-05 9E-10 67.3 5.8 58 163-222 7-68 (144)
225 2tps_A Protein (thiamin phosph 97.8 0.0001 3.4E-09 69.5 10.2 116 253-385 87-205 (227)
226 1vhc_A Putative KHG/KDPG aldol 97.8 9.1E-05 3.1E-09 69.8 9.6 120 237-384 69-189 (224)
227 3lab_A Putative KDPG (2-keto-3 97.8 0.00011 3.9E-09 68.3 10.0 121 237-384 65-191 (217)
228 3sl7_A CBS domain-containing p 97.7 1.5E-05 5E-10 71.8 3.8 58 164-221 4-62 (180)
229 3aty_A Tcoye, prostaglandin F2 97.7 0.00019 6.6E-09 73.0 12.5 125 248-386 175-342 (379)
230 3fhm_A Uncharacterized protein 97.7 2.4E-05 8.1E-10 69.8 5.0 59 163-221 23-83 (165)
231 1o94_A Tmadh, trimethylamine d 97.7 0.00012 4.3E-09 81.1 11.9 138 248-386 150-327 (729)
232 2pfi_A Chloride channel protei 97.7 2.8E-05 9.7E-10 68.7 5.4 58 163-222 12-72 (164)
233 3ajx_A 3-hexulose-6-phosphate 97.7 0.00078 2.7E-08 62.3 15.4 122 250-385 67-191 (207)
234 1wbh_A KHG/KDPG aldolase; lyas 97.7 0.00014 4.9E-09 68.0 10.1 119 237-384 68-188 (214)
235 1mxs_A KDPG aldolase; 2-keto-3 97.7 0.00012 4.2E-09 69.0 9.6 119 237-384 78-198 (225)
236 3qja_A IGPS, indole-3-glycerol 97.7 0.00072 2.5E-08 65.5 15.2 121 248-385 73-194 (272)
237 1ub3_A Aldolase protein; schif 97.7 0.00031 1.1E-08 65.8 12.0 123 249-382 73-209 (220)
238 2yzr_A Pyridoxal biosynthesis 97.7 0.00018 6.1E-09 70.7 10.7 66 250-316 27-102 (330)
239 2j9l_A Chloride channel protei 97.7 2.9E-05 9.8E-10 70.3 4.6 60 163-222 10-76 (185)
240 3tha_A Tryptophan synthase alp 97.7 0.0011 3.6E-08 63.3 15.6 161 178-385 68-232 (252)
241 3kxr_A Magnesium transporter, 97.6 0.0002 6.8E-09 66.5 10.1 96 162-266 52-152 (205)
242 1tqj_A Ribulose-phosphate 3-ep 97.6 0.00011 3.7E-09 69.7 8.2 125 251-385 76-206 (230)
243 1w8s_A FBP aldolase, fructose- 97.6 0.00053 1.8E-08 66.2 13.0 118 251-386 96-237 (263)
244 1rpx_A Protein (ribulose-phosp 97.6 0.00021 7E-09 67.6 9.9 128 249-386 80-213 (230)
245 4fry_A Putative signal-transdu 97.6 4.4E-05 1.5E-09 67.2 4.6 59 164-222 7-69 (157)
246 3ceu_A Thiamine phosphate pyro 97.6 0.00026 9E-09 66.0 10.2 81 297-386 95-178 (210)
247 3k30_A Histamine dehydrogenase 97.6 0.00013 4.5E-09 80.3 9.2 135 248-387 157-331 (690)
248 2h6r_A Triosephosphate isomera 97.6 0.00029 9.9E-09 66.2 9.9 125 253-386 75-205 (219)
249 2agk_A 1-(5-phosphoribosyl)-5- 97.5 0.00045 1.5E-08 66.6 11.2 173 183-383 38-239 (260)
250 3tdn_A FLR symmetric alpha-bet 97.5 8.8E-05 3E-09 71.0 6.1 78 299-386 37-114 (247)
251 2p10_A MLL9387 protein; putati 97.5 0.00063 2.2E-08 65.2 11.5 129 248-384 109-263 (286)
252 2uv4_A 5'-AMP-activated protei 97.5 0.0001 3.6E-09 64.5 5.3 56 163-222 22-78 (152)
253 3glc_A Aldolase LSRF; TIM barr 97.5 0.001 3.4E-08 65.1 12.7 115 252-386 130-263 (295)
254 3pc3_A CG1753, isoform A; CBS, 97.4 8.2E-05 2.8E-09 79.3 5.0 58 163-222 383-443 (527)
255 1ka9_F Imidazole glycerol phos 97.4 0.0003 1E-08 67.3 8.2 77 300-386 34-110 (252)
256 2f6u_A GGGPS, (S)-3-O-geranylg 97.4 0.002 6.9E-08 60.8 13.4 131 248-384 21-222 (234)
257 3r12_A Deoxyribose-phosphate a 97.4 0.0042 1.5E-07 59.2 15.5 121 249-380 113-245 (260)
258 2oux_A Magnesium transporter; 97.4 0.00014 4.8E-09 71.2 5.3 57 162-220 135-197 (286)
259 3org_A CMCLC; transporter, tra 97.4 0.00025 8.4E-09 77.3 7.7 62 162-223 451-514 (632)
260 3nl6_A Thiamine biosynthetic b 97.4 0.0015 5.3E-08 69.3 13.6 86 296-386 114-215 (540)
261 1h1y_A D-ribulose-5-phosphate 97.4 0.00089 3E-08 63.2 10.6 123 251-385 78-206 (228)
262 1viz_A PCRB protein homolog; s 97.4 0.0025 8.5E-08 60.4 13.6 130 247-385 20-215 (240)
263 2yvy_A MGTE, Mg2+ transporter 97.3 0.0008 2.7E-08 65.4 10.3 98 162-267 133-236 (278)
264 3tsm_A IGPS, indole-3-glycerol 97.3 0.0031 1E-07 60.9 13.9 124 246-386 78-202 (272)
265 3kts_A Glycerol uptake operon 97.3 0.0032 1.1E-07 57.4 13.1 39 346-384 145-183 (192)
266 3ndo_A Deoxyribose-phosphate a 97.3 0.005 1.7E-07 57.8 14.5 121 249-379 82-218 (231)
267 1vcv_A Probable deoxyribose-ph 97.2 0.006 2E-07 57.2 14.6 125 250-375 70-211 (226)
268 1thf_D HISF protein; thermophI 97.2 0.00087 3E-08 64.0 8.5 76 300-385 33-108 (253)
269 3vzx_A Heptaprenylglyceryl pho 97.2 0.0019 6.5E-08 60.6 10.3 38 347-385 175-213 (228)
270 3ovp_A Ribulose-phosphate 3-ep 97.1 0.0025 8.4E-08 60.1 11.0 121 251-384 78-201 (228)
271 1qap_A Quinolinic acid phospho 97.1 0.0024 8.3E-08 62.5 11.2 89 276-383 195-283 (296)
272 2b7n_A Probable nicotinate-nuc 97.1 0.0011 3.6E-08 64.4 8.3 91 276-384 168-261 (273)
273 2v82_A 2-dehydro-3-deoxy-6-pho 97.1 0.0043 1.5E-07 57.5 12.3 107 247-379 19-127 (212)
274 1n7k_A Deoxyribose-phosphate a 97.1 0.0022 7.4E-08 60.5 9.9 115 249-375 90-216 (234)
275 1w0m_A TIM, triosephosphate is 97.1 0.0094 3.2E-07 55.9 14.1 123 253-386 78-208 (226)
276 1to3_A Putative aldolase YIHT; 97.1 0.004 1.4E-07 61.3 11.9 121 252-384 113-258 (304)
277 1vc4_A Indole-3-glycerol phosp 97.0 0.0069 2.4E-07 58.0 13.3 121 247-385 65-186 (254)
278 3w01_A Heptaprenylglyceryl pho 97.0 0.0035 1.2E-07 59.0 10.6 131 249-385 25-219 (235)
279 1hg3_A Triosephosphate isomera 97.0 0.0092 3.2E-07 55.9 13.5 123 253-386 81-211 (225)
280 3tjl_A NADPH dehydrogenase; OL 97.0 0.0021 7.3E-08 65.6 9.7 131 249-386 170-352 (407)
281 3cwo_X Beta/alpha-barrel prote 97.0 0.013 4.6E-07 54.3 14.3 128 253-384 18-207 (237)
282 2w6r_A Imidazole glycerol phos 97.0 0.0012 4.1E-08 63.6 7.0 76 299-384 32-107 (266)
283 3inp_A D-ribulose-phosphate 3- 96.9 0.0015 5E-08 62.3 7.4 124 250-384 99-227 (246)
284 1x1o_A Nicotinate-nucleotide p 96.9 0.0041 1.4E-07 60.5 10.6 89 277-384 183-272 (286)
285 1p1x_A Deoxyribose-phosphate a 96.9 0.0065 2.2E-07 58.2 11.6 123 249-383 87-228 (260)
286 3ctl_A D-allulose-6-phosphate 96.9 0.0032 1.1E-07 59.5 9.1 124 251-384 71-200 (231)
287 1qo2_A Molecule: N-((5-phospho 96.9 0.00057 1.9E-08 65.0 3.9 78 299-387 32-109 (241)
288 2a4a_A Deoxyribose-phosphate a 96.9 0.0055 1.9E-07 59.2 10.8 117 249-375 108-249 (281)
289 2jbm_A Nicotinate-nucleotide p 96.9 0.0017 6E-08 63.7 7.3 90 277-384 184-276 (299)
290 3cu2_A Ribulose-5-phosphate 3- 96.8 0.0043 1.5E-07 58.7 9.7 130 248-385 80-222 (237)
291 1q6o_A Humps, 3-keto-L-gulonat 96.8 0.016 5.3E-07 54.0 13.2 124 250-385 70-196 (216)
292 1h5y_A HISF; histidine biosynt 96.8 0.0035 1.2E-07 59.4 8.8 77 299-385 35-111 (253)
293 2zy9_A Mg2+ transporter MGTE; 96.8 0.0027 9.2E-08 66.6 8.6 101 162-271 153-260 (473)
294 2czd_A Orotidine 5'-phosphate 96.8 0.01 3.4E-07 55.0 11.6 113 249-385 67-190 (208)
295 4a3u_A NCR, NADH\:flavin oxido 96.8 0.0091 3.1E-07 60.2 12.1 130 248-387 153-322 (358)
296 3paj_A Nicotinate-nucleotide p 96.7 0.0077 2.6E-07 59.1 10.9 88 276-382 218-305 (320)
297 3c2e_A Nicotinate-nucleotide p 96.7 0.0014 4.9E-08 64.1 5.7 90 276-383 185-280 (294)
298 3tqv_A Nicotinate-nucleotide p 96.7 0.0053 1.8E-07 59.4 9.5 89 276-383 185-273 (287)
299 1qpo_A Quinolinate acid phosph 96.7 0.0058 2E-07 59.4 9.9 90 276-383 181-272 (284)
300 2y88_A Phosphoribosyl isomeras 96.7 0.002 6.8E-08 61.2 6.5 76 299-385 33-108 (244)
301 3l0g_A Nicotinate-nucleotide p 96.7 0.0071 2.4E-07 58.7 9.7 89 276-383 194-282 (300)
302 3exr_A RMPD (hexulose-6-phosph 96.6 0.02 7E-07 53.5 12.7 127 249-384 71-200 (221)
303 1vzw_A Phosphoribosyl isomeras 96.6 0.0021 7.3E-08 61.0 5.9 76 299-385 34-109 (244)
304 1o4u_A Type II quinolic acid p 96.6 0.0031 1E-07 61.3 6.9 91 276-384 179-272 (285)
305 3gnn_A Nicotinate-nucleotide p 96.6 0.0059 2E-07 59.4 8.7 89 276-383 196-284 (298)
306 3vk5_A MOEO5; TIM barrel, tran 96.5 0.0029 9.8E-08 60.8 6.1 69 302-385 191-261 (286)
307 3q58_A N-acetylmannosamine-6-p 96.5 0.025 8.6E-07 53.2 12.2 109 248-380 37-156 (229)
308 3igs_A N-acetylmannosamine-6-p 96.5 0.027 9.1E-07 53.1 12.3 110 247-380 36-156 (232)
309 3iv3_A Tagatose 1,6-diphosphat 96.3 0.034 1.2E-06 55.0 12.3 126 253-383 116-283 (332)
310 3f4w_A Putative hexulose 6 pho 96.2 0.037 1.3E-06 51.0 11.9 128 237-381 3-135 (211)
311 4adt_A Pyridoxine biosynthetic 96.2 0.035 1.2E-06 54.2 12.0 111 250-381 31-153 (297)
312 1wv2_A Thiazole moeity, thiazo 96.2 0.019 6.5E-07 54.4 9.6 90 184-317 123-216 (265)
313 1tqx_A D-ribulose-5-phosphate 96.1 0.057 2E-06 50.6 12.4 177 183-385 18-206 (227)
314 4a29_A Engineered retro-aldol 96.1 0.13 4.5E-06 48.6 14.6 122 249-388 66-188 (258)
315 1y0e_A Putative N-acetylmannos 96.0 0.083 2.8E-06 49.0 13.2 114 248-382 24-148 (223)
316 1i4n_A Indole-3-glycerol phosp 96.0 0.07 2.4E-06 50.8 12.5 117 248-382 62-180 (251)
317 4gbu_A NADPH dehydrogenase 1; 96.0 0.018 6.1E-07 58.9 8.8 133 248-386 173-354 (400)
318 3s1x_A Probable transaldolase; 95.9 0.11 3.8E-06 48.2 13.3 124 247-384 67-192 (223)
319 3o07_A Pyridoxine biosynthesis 95.8 0.085 2.9E-06 50.4 11.9 111 249-378 20-140 (291)
320 3khj_A Inosine-5-monophosphate 95.8 0.12 4.2E-06 51.8 14.0 113 250-380 59-173 (361)
321 3r8r_A Transaldolase; pentose 95.7 0.13 4.4E-06 47.5 12.6 125 247-384 65-190 (212)
322 1ea0_A Glutamate synthase [NAD 95.7 0.036 1.2E-06 64.5 10.5 69 249-317 1006-1093(1479)
323 3jr2_A Hexulose-6-phosphate sy 95.7 0.2 6.9E-06 46.4 14.0 128 235-379 7-138 (218)
324 3ajx_A 3-hexulose-6-phosphate 95.6 0.1 3.4E-06 47.8 11.5 125 238-380 4-134 (207)
325 1pii_A N-(5'phosphoribosyl)ant 95.4 0.15 5E-06 52.7 13.2 119 248-384 69-188 (452)
326 2qr6_A IMP dehydrogenase/GMP r 95.3 0.079 2.7E-06 53.9 10.6 97 274-381 142-240 (393)
327 4eiv_A Deoxyribose-phosphate a 95.2 0.17 5.9E-06 48.7 11.7 123 249-384 102-262 (297)
328 4fo4_A Inosine 5'-monophosphat 95.1 0.2 6.8E-06 50.4 12.7 113 250-380 60-177 (366)
329 1yxy_A Putative N-acetylmannos 94.9 0.23 8E-06 46.3 12.0 110 248-377 37-157 (234)
330 3b0p_A TRNA-dihydrouridine syn 94.8 0.078 2.7E-06 53.1 8.7 69 248-317 145-225 (350)
331 4gj1_A 1-(5-phosphoribosyl)-5- 94.4 0.046 1.6E-06 51.8 5.8 75 300-385 34-109 (243)
332 3gr7_A NADPH dehydrogenase; fl 94.4 0.24 8.1E-06 49.3 11.3 70 247-317 229-307 (340)
333 3bo9_A Putative nitroalkan dio 94.4 0.29 1E-05 48.3 11.8 66 251-317 135-205 (326)
334 1f76_A Dihydroorotate dehydrog 94.3 0.19 6.6E-06 49.8 10.4 70 248-317 226-318 (336)
335 3zwt_A Dihydroorotate dehydrog 94.3 0.3 1E-05 49.1 11.7 70 248-317 235-327 (367)
336 1vkf_A Glycerol uptake operon 94.0 0.031 1.1E-06 50.5 3.4 33 350-383 148-180 (188)
337 3i65_A Dihydroorotate dehydrog 94.0 0.27 9.2E-06 50.1 10.6 70 248-317 284-374 (415)
338 1ypf_A GMP reductase; GUAC, pu 94.0 0.17 5.8E-06 50.3 9.1 67 250-317 160-239 (336)
339 1mdl_A Mandelate racemase; iso 93.9 0.54 1.8E-05 47.0 12.9 119 247-382 146-272 (359)
340 2ovl_A Putative racemase; stru 93.9 0.37 1.3E-05 48.4 11.7 119 247-382 148-274 (371)
341 2gjl_A Hypothetical protein PA 93.8 0.54 1.8E-05 46.4 12.5 183 46-317 5-201 (328)
342 3bw2_A 2-nitropropane dioxygen 93.8 0.45 1.6E-05 47.8 12.1 211 46-317 2-237 (369)
343 2pgw_A Muconate cycloisomerase 93.8 0.7 2.4E-05 46.6 13.5 119 246-382 148-273 (384)
344 3nav_A Tryptophan synthase alp 93.8 0.49 1.7E-05 45.4 11.5 68 249-317 162-237 (271)
345 1tv5_A Dhodehase, dihydroorota 93.7 0.23 7.9E-06 51.2 9.8 79 239-317 300-402 (443)
346 2htm_A Thiazole biosynthesis p 93.6 0.28 9.5E-06 46.6 9.3 67 251-317 136-207 (268)
347 2nv1_A Pyridoxal biosynthesis 93.5 0.48 1.6E-05 46.3 11.3 112 249-379 30-151 (305)
348 1jvn_A Glutamine, bifunctional 93.4 0.078 2.7E-06 56.5 5.8 77 300-384 283-371 (555)
349 2wqp_A Polysialic acid capsule 93.4 1.1 3.6E-05 44.6 13.6 114 247-379 35-180 (349)
350 2tps_A Protein (thiamin phosph 93.4 0.37 1.3E-05 44.6 9.9 109 249-384 33-147 (227)
351 1p0k_A Isopentenyl-diphosphate 93.4 0.45 1.5E-05 47.4 11.1 223 23-317 22-280 (349)
352 1rvk_A Isomerase/lactonizing e 93.4 0.88 3E-05 45.8 13.4 119 246-381 150-283 (382)
353 2uva_G Fatty acid synthase bet 93.4 0.18 6E-06 61.5 9.3 101 177-318 672-796 (2060)
354 2og9_A Mandelate racemase/muco 93.3 0.82 2.8E-05 46.3 13.1 118 246-380 163-288 (393)
355 3vav_A 3-methyl-2-oxobutanoate 93.3 0.65 2.2E-05 44.5 11.4 101 277-380 18-126 (275)
356 2nli_A Lactate oxidase; flavoe 93.2 0.21 7.3E-06 50.2 8.4 68 250-317 240-313 (368)
357 2rdx_A Mandelate racemase/muco 93.2 1.1 3.6E-05 45.2 13.6 117 245-382 145-269 (379)
358 1vcf_A Isopentenyl-diphosphate 93.1 0.32 1.1E-05 48.1 9.5 68 250-317 195-285 (332)
359 1z41_A YQJM, probable NADH-dep 93.1 0.35 1.2E-05 48.0 9.7 69 248-317 230-307 (338)
360 1nu5_A Chloromuconate cycloiso 93.0 1.2 4.2E-05 44.5 13.8 119 245-380 142-269 (370)
361 3hgj_A Chromate reductase; TIM 92.9 0.41 1.4E-05 47.7 9.9 69 248-317 240-318 (349)
362 1rd5_A Tryptophan synthase alp 92.9 1 3.5E-05 42.7 12.4 67 250-317 156-230 (262)
363 3vkj_A Isopentenyl-diphosphate 92.9 0.47 1.6E-05 47.7 10.3 68 250-317 201-296 (368)
364 1jub_A Dihydroorotate dehydrog 92.8 0.48 1.6E-05 46.3 10.1 69 249-317 174-271 (311)
365 1vli_A Spore coat polysacchari 92.7 0.96 3.3E-05 45.5 12.2 105 248-371 45-178 (385)
366 2nzl_A Hydroxyacid oxidase 1; 92.7 0.29 9.8E-06 49.7 8.6 68 250-317 263-336 (392)
367 2oz8_A MLL7089 protein; struct 92.7 1.7 5.8E-05 43.9 14.4 116 247-380 147-273 (389)
368 1ep3_A Dihydroorotate dehydrog 92.6 0.45 1.5E-05 46.3 9.7 69 248-317 177-270 (311)
369 2z6i_A Trans-2-enoyl-ACP reduc 92.6 0.31 1.1E-05 48.3 8.5 180 47-317 3-191 (332)
370 3vk5_A MOEO5; TIM barrel, tran 92.5 0.67 2.3E-05 44.4 10.2 66 250-317 189-256 (286)
371 1xi3_A Thiamine phosphate pyro 92.5 0.73 2.5E-05 42.0 10.4 109 248-383 27-138 (215)
372 2e6f_A Dihydroorotate dehydrog 92.5 0.41 1.4E-05 46.9 9.1 69 249-317 176-273 (314)
373 3sgz_A Hydroxyacid oxidase 2; 92.4 0.35 1.2E-05 48.2 8.6 68 250-317 228-301 (352)
374 1wx0_A Transaldolase; structur 92.4 2.1 7.3E-05 39.7 13.4 123 247-383 73-197 (223)
375 3stp_A Galactonate dehydratase 92.4 2.4 8.3E-05 43.1 15.1 120 246-382 180-313 (412)
376 2nql_A AGR_PAT_674P, isomerase 92.4 0.65 2.2E-05 47.0 10.8 117 246-380 165-289 (388)
377 3i4k_A Muconate lactonizing en 92.3 3.1 0.00011 41.8 15.7 121 245-382 148-277 (383)
378 2zbt_A Pyridoxal biosynthesis 92.3 0.92 3.1E-05 44.0 11.3 109 250-379 31-151 (297)
379 4dwd_A Mandelate racemase/muco 92.3 2.6 8.8E-05 42.6 15.0 118 247-381 141-272 (393)
380 1gox_A (S)-2-hydroxy-acid oxid 92.1 0.43 1.5E-05 48.1 8.9 68 250-317 236-309 (370)
381 1vpx_A Protein (transaldolase 92.0 2.1 7.3E-05 39.8 12.8 123 247-383 76-200 (230)
382 1mzh_A Deoxyribose-phosphate a 92.0 0.36 1.2E-05 45.0 7.6 67 248-314 133-201 (225)
383 1yad_A Regulatory protein TENI 91.9 0.73 2.5E-05 42.5 9.6 65 251-317 121-192 (221)
384 3vnd_A TSA, tryptophan synthas 91.9 0.98 3.3E-05 43.2 10.7 68 249-317 160-235 (267)
385 3m47_A Orotidine 5'-phosphate 91.8 2 6.8E-05 40.0 12.5 115 249-385 80-207 (228)
386 1h1y_A D-ribulose-5-phosphate 91.8 0.53 1.8E-05 43.8 8.6 122 247-384 19-149 (228)
387 3sr7_A Isopentenyl-diphosphate 91.7 0.63 2.1E-05 46.7 9.5 216 24-317 54-307 (365)
388 2gdq_A YITF; mandelate racemas 91.7 1.6 5.3E-05 44.0 12.6 117 247-380 141-266 (382)
389 3ngj_A Deoxyribose-phosphate a 91.7 0.36 1.2E-05 45.4 7.1 126 247-384 43-181 (239)
390 3kts_A Glycerol uptake operon 91.6 0.47 1.6E-05 43.0 7.6 64 249-318 116-180 (192)
391 2pp0_A L-talarate/galactarate 91.5 1.9 6.3E-05 43.7 13.0 118 246-380 176-301 (398)
392 2qdd_A Mandelate racemase/muco 91.5 2.5 8.4E-05 42.4 13.8 117 245-381 145-268 (378)
393 2qgy_A Enolase from the enviro 91.5 1.3 4.4E-05 44.8 11.7 118 246-380 150-275 (391)
394 1tkk_A Similar to chloromucona 91.5 2.7 9.2E-05 41.9 14.0 120 245-381 140-269 (366)
395 3g8r_A Probable spore coat pol 91.4 2.3 7.8E-05 42.2 13.0 105 248-371 22-155 (350)
396 1tzz_A Hypothetical protein L1 91.3 1.9 6.4E-05 43.6 12.7 118 247-381 167-296 (392)
397 1kbi_A Cytochrome B2, L-LCR; f 91.1 0.62 2.1E-05 49.0 9.1 68 250-317 354-432 (511)
398 3l5l_A Xenobiotic reductase A; 91.0 0.53 1.8E-05 47.2 8.2 69 248-317 247-325 (363)
399 3sjn_A Mandelate racemase/muco 91.0 4.5 0.00015 40.5 15.1 118 247-381 148-276 (374)
400 3ffs_A Inosine-5-monophosphate 91.0 0.51 1.8E-05 47.9 8.1 69 249-317 194-275 (400)
401 2hjp_A Phosphonopyruvate hydro 91.0 1.3 4.3E-05 43.0 10.5 96 280-379 7-109 (290)
402 3ih1_A Methylisocitrate lyase; 90.9 1 3.4E-05 44.0 9.7 90 289-380 28-124 (305)
403 3nvt_A 3-deoxy-D-arabino-heptu 90.7 1.1 3.8E-05 45.2 10.2 112 247-378 156-281 (385)
404 3o63_A Probable thiamine-phosp 90.7 1.1 3.6E-05 42.3 9.5 112 247-384 43-166 (243)
405 2vp8_A Dihydropteroate synthas 90.6 1.3 4.4E-05 43.4 10.2 68 246-314 64-141 (318)
406 3eoo_A Methylisocitrate lyase; 90.5 1.2 4.2E-05 43.2 10.0 98 279-380 13-118 (298)
407 3dg3_A Muconate cycloisomerase 90.5 5.1 0.00017 40.0 15.0 119 245-380 139-266 (367)
408 2zad_A Muconate cycloisomerase 90.5 5.3 0.00018 39.4 15.0 117 245-379 139-264 (345)
409 3fok_A Uncharacterized protein 90.4 1.6 5.3E-05 42.4 10.4 113 252-385 133-278 (307)
410 1qop_A Tryptophan synthase alp 90.4 1.7 5.9E-05 41.4 10.9 67 250-317 160-234 (268)
411 1xg4_A Probable methylisocitra 90.4 1.4 4.7E-05 42.8 10.1 96 280-379 9-113 (295)
412 1xky_A Dihydrodipicolinate syn 90.3 2.4 8.1E-05 41.2 12.0 113 248-371 34-163 (301)
413 3fkr_A L-2-keto-3-deoxyarabona 90.3 1.7 5.9E-05 42.4 11.0 70 248-317 30-110 (309)
414 1l6w_A Fructose-6-phosphate al 90.3 2 7E-05 39.7 10.8 122 248-383 67-190 (220)
415 2yxg_A DHDPS, dihydrodipicolin 90.3 2.5 8.6E-05 40.8 12.0 111 248-369 22-150 (289)
416 3rcy_A Mandelate racemase/muco 90.1 5.6 0.00019 40.7 15.1 119 245-380 146-284 (433)
417 2ehh_A DHDPS, dihydrodipicolin 90.1 2.6 8.9E-05 40.8 12.0 111 248-369 22-150 (294)
418 2gou_A Oxidoreductase, FMN-bin 90.1 0.82 2.8E-05 45.9 8.6 67 249-317 252-322 (365)
419 2qiw_A PEP phosphonomutase; st 90.0 1.4 4.6E-05 41.9 9.6 90 289-380 19-113 (255)
420 3cpr_A Dihydrodipicolinate syn 90.0 2.9 9.9E-05 40.7 12.3 70 248-317 38-118 (304)
421 3ozy_A Putative mandelate race 90.0 2.4 8.2E-05 42.8 12.1 120 245-382 151-279 (389)
422 3b8i_A PA4872 oxaloacetate dec 90.0 1.1 3.8E-05 43.3 9.0 90 289-380 20-117 (287)
423 2hzg_A Mandelate racemase/muco 89.9 3.8 0.00013 41.4 13.7 119 245-380 145-277 (401)
424 3r2g_A Inosine 5'-monophosphat 89.9 0.98 3.4E-05 45.1 8.9 66 250-317 152-228 (361)
425 3l21_A DHDPS, dihydrodipicolin 89.9 2.6 8.8E-05 41.0 11.8 114 247-371 36-166 (304)
426 2agk_A 1-(5-phosphoribosyl)-5- 89.9 0.2 6.7E-06 47.9 3.7 69 300-386 41-109 (260)
427 3toy_A Mandelate racemase/muco 89.9 4.8 0.00016 40.5 14.2 120 245-381 167-295 (383)
428 2r8w_A AGR_C_1641P; APC7498, d 89.9 2.5 8.5E-05 41.7 11.8 113 248-371 56-185 (332)
429 1xm3_A Thiazole biosynthesis p 89.8 0.64 2.2E-05 44.4 7.3 66 251-317 138-207 (264)
430 1zco_A 2-dehydro-3-deoxyphosph 89.8 2.2 7.4E-05 40.6 11.0 105 247-371 37-151 (262)
431 1ub3_A Aldolase protein; schif 89.8 0.68 2.3E-05 43.0 7.2 124 247-384 19-157 (220)
432 1eep_A Inosine 5'-monophosphat 89.8 0.86 2.9E-05 46.3 8.6 68 250-317 205-285 (404)
433 1vyr_A Pentaerythritol tetrani 89.6 1.1 3.7E-05 45.0 9.0 67 249-317 253-323 (364)
434 3flu_A DHDPS, dihydrodipicolin 89.6 3 0.0001 40.4 12.1 113 248-371 29-158 (297)
435 3m5v_A DHDPS, dihydrodipicolin 89.5 2.7 9.1E-05 40.8 11.6 70 248-317 29-110 (301)
436 1p4c_A L(+)-mandelate dehydrog 89.5 0.46 1.6E-05 48.0 6.2 67 250-317 236-307 (380)
437 3ih1_A Methylisocitrate lyase; 89.5 1.6 5.3E-05 42.6 9.7 118 248-383 105-246 (305)
438 3i6e_A Muconate cycloisomerase 89.3 5.8 0.0002 39.8 14.3 117 247-380 150-273 (385)
439 3tak_A DHDPS, dihydrodipicolin 89.2 3.1 0.0001 40.2 11.7 70 248-317 23-103 (291)
440 3dz1_A Dihydrodipicolinate syn 89.2 3.2 0.00011 40.5 12.0 70 248-317 30-109 (313)
441 3jva_A Dipeptide epimerase; en 89.2 6.2 0.00021 39.1 14.3 120 244-381 138-265 (354)
442 3eez_A Putative mandelate race 89.1 2.7 9.3E-05 42.2 11.7 117 245-382 145-269 (378)
443 3ddm_A Putative mandelate race 89.1 4.6 0.00016 40.7 13.4 117 246-380 156-281 (392)
444 2ps2_A Putative mandelate race 89.1 3.6 0.00012 41.1 12.5 115 245-380 146-269 (371)
445 1gte_A Dihydropyrimidine dehyd 89.1 1.1 3.8E-05 51.3 9.8 70 248-317 716-816 (1025)
446 1s2w_A Phosphoenolpyruvate pho 89.0 1.4 4.8E-05 42.7 9.1 90 289-380 18-114 (295)
447 3s5o_A 4-hydroxy-2-oxoglutarat 89.0 2.8 9.7E-05 40.8 11.4 70 248-317 36-116 (307)
448 3tr9_A Dihydropteroate synthas 89.0 2.7 9.1E-05 41.1 11.0 67 246-314 48-129 (314)
449 2p8b_A Mandelate racemase/muco 89.0 5.6 0.00019 39.6 13.9 119 245-381 141-268 (369)
450 1rpx_A Protein (ribulose-phosp 89.0 0.7 2.4E-05 42.9 6.7 121 247-382 23-149 (230)
451 4ef8_A Dihydroorotate dehydrog 89.0 1.7 5.9E-05 43.3 9.9 42 276-317 264-306 (354)
452 2v9d_A YAGE; dihydrodipicolini 88.9 2.7 9.1E-05 41.7 11.3 70 248-317 53-133 (343)
453 2wkj_A N-acetylneuraminate lya 88.9 3.4 0.00012 40.1 11.9 70 248-317 33-113 (303)
454 2f6u_A GGGPS, (S)-3-O-geranylg 88.9 0.98 3.4E-05 42.3 7.6 64 251-317 149-218 (234)
455 3b4u_A Dihydrodipicolinate syn 88.9 3.6 0.00012 39.8 11.9 70 248-317 25-105 (294)
456 1m3u_A 3-methyl-2-oxobutanoate 88.7 3.2 0.00011 39.4 11.0 99 278-379 7-113 (264)
457 1o5k_A DHDPS, dihydrodipicolin 88.7 2.7 9.4E-05 40.9 11.0 98 248-356 34-143 (306)
458 3ugv_A Enolase; enzyme functio 88.7 5.7 0.0002 40.0 13.8 118 246-380 172-300 (390)
459 3qze_A DHDPS, dihydrodipicolin 88.7 2.9 9.9E-05 40.9 11.2 113 248-371 45-174 (314)
460 2c6q_A GMP reductase 2; TIM ba 88.6 1.8 6.1E-05 43.1 9.8 68 250-317 172-252 (351)
461 3ru6_A Orotidine 5'-phosphate 88.6 3 0.0001 40.5 11.0 113 251-386 94-236 (303)
462 2yyu_A Orotidine 5'-phosphate 88.6 2.4 8.3E-05 39.8 10.3 113 251-385 73-220 (246)
463 3qfe_A Putative dihydrodipicol 88.6 2.6 9E-05 41.3 10.8 70 248-317 33-113 (318)
464 1eix_A Orotidine 5'-monophosph 88.5 0.27 9.3E-06 46.5 3.5 44 340-385 173-226 (245)
465 1tqj_A Ribulose-phosphate 3-ep 88.5 0.75 2.6E-05 42.9 6.5 122 247-385 17-146 (230)
466 1zlp_A PSR132, petal death pro 88.5 2.1 7.1E-05 41.9 9.9 90 289-380 38-136 (318)
467 3tj4_A Mandelate racemase; eno 88.5 6.9 0.00024 39.0 14.2 118 246-380 152-278 (372)
468 3oa3_A Aldolase; structural ge 88.4 1.1 3.7E-05 43.2 7.6 124 247-384 74-212 (288)
469 3daq_A DHDPS, dihydrodipicolin 88.4 2.9 0.0001 40.4 11.0 113 248-371 24-153 (292)
470 2yci_X 5-methyltetrahydrofolat 88.4 8.9 0.00031 36.5 14.2 67 247-315 34-105 (271)
471 3kru_A NADH:flavin oxidoreduct 88.4 1.9 6.5E-05 42.8 9.7 68 248-317 231-307 (343)
472 1f6k_A N-acetylneuraminate lya 88.2 3.3 0.00011 40.0 11.2 70 248-317 25-106 (293)
473 4dye_A Isomerase; enolase fami 88.2 6.2 0.00021 39.9 13.7 115 247-381 170-292 (398)
474 3my9_A Muconate cycloisomerase 88.2 5.1 0.00018 40.1 13.0 118 246-380 147-272 (377)
475 1a3w_A Pyruvate kinase; allost 88.1 3.4 0.00012 43.0 11.7 124 248-381 194-333 (500)
476 3na8_A Putative dihydrodipicol 88.1 2.6 9E-05 41.2 10.4 70 248-317 46-126 (315)
477 3si9_A DHDPS, dihydrodipicolin 88.1 3.1 0.00011 40.7 10.9 70 248-317 44-124 (315)
478 3noy_A 4-hydroxy-3-methylbut-2 88.0 3 0.0001 41.2 10.5 92 248-356 47-138 (366)
479 3bjs_A Mandelate racemase/muco 87.9 4.3 0.00015 41.5 12.4 116 247-380 187-311 (428)
480 1o66_A 3-methyl-2-oxobutanoate 87.9 4.4 0.00015 38.7 11.5 99 278-379 7-114 (275)
481 2rfg_A Dihydrodipicolinate syn 87.9 2.6 9E-05 40.8 10.3 113 248-371 22-151 (297)
482 3oix_A Putative dihydroorotate 87.8 1.2 4.2E-05 44.2 7.8 41 277-317 262-304 (345)
483 3vzx_A Heptaprenylglyceryl pho 87.7 2.3 7.9E-05 39.5 9.2 56 259-317 152-208 (228)
484 1ydn_A Hydroxymethylglutaryl-C 87.5 2 6.9E-05 41.5 9.2 131 246-381 25-176 (295)
485 2ojp_A DHDPS, dihydrodipicolin 87.5 2.7 9.3E-05 40.6 10.1 113 248-371 23-152 (292)
486 4e4u_A Mandalate racemase/muco 87.4 8.8 0.0003 38.9 14.3 119 246-381 145-283 (412)
487 3mwc_A Mandelate racemase/muco 87.4 4.1 0.00014 41.2 11.8 115 246-380 164-285 (400)
488 2yxb_A Coenzyme B12-dependent 87.3 3.4 0.00012 36.1 9.8 68 248-315 57-126 (161)
489 3hqn_D Pyruvate kinase, PK; TI 87.0 4.4 0.00015 42.1 11.7 123 247-380 192-331 (499)
490 1tqx_A D-ribulose-5-phosphate 87.0 3.4 0.00012 38.4 10.0 69 249-317 126-201 (227)
491 3tha_A Tryptophan synthase alp 86.9 3.4 0.00012 39.0 10.0 67 249-317 153-227 (252)
492 1aj0_A DHPS, dihydropteroate s 86.9 13 0.00044 35.6 14.3 67 247-315 38-115 (282)
493 1vs1_A 3-deoxy-7-phosphoheptul 86.9 3.8 0.00013 39.2 10.5 105 247-371 52-166 (276)
494 3gka_A N-ethylmaleimide reduct 86.8 1.2 4E-05 44.7 7.1 63 249-317 252-316 (361)
495 4ab4_A Xenobiotic reductase B; 86.8 1.2 4E-05 44.6 7.2 63 249-317 244-308 (362)
496 1ujp_A Tryptophan synthase alp 86.8 2.4 8.2E-05 40.5 9.1 65 250-317 157-229 (271)
497 3h5d_A DHDPS, dihydrodipicolin 86.8 5.9 0.0002 38.6 12.1 115 246-371 27-159 (311)
498 3p3b_A Mandelate racemase/muco 86.8 1.7 5.8E-05 43.9 8.5 118 247-380 150-285 (392)
499 2vc6_A MOSA, dihydrodipicolina 86.8 2.8 9.7E-05 40.5 9.7 112 248-370 22-151 (292)
500 3b4u_A Dihydrodipicolinate syn 86.8 19 0.00065 34.6 15.7 169 185-383 26-215 (294)
No 1
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=100.00 E-value=1.2e-107 Score=843.77 Aligned_cols=494 Identities=47% Similarity=0.747 Sum_probs=353.0
Q ss_pred CCCCCCCCccHHHhhccC--CCCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCC
Q 010640 4 SPLPIEDGFSADRLFSQG--YSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGG 81 (505)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~--~~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg 81 (505)
+-|++.||+++.++|... .+||||||+|+|+|++++|+++++.|++|+++.+++|+|+|+||+||+.+||++|++.||
T Consensus 38 ~~~~~~dg~~~~~l~~~~~~~GLTfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVTe~~MAIamAr~GG 117 (556)
T 4af0_A 38 EEYPRGDGLSLQELMDSRKNGGLTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVTEDRMAIALALHGG 117 (556)
T ss_dssp TTSSSCSSBCHHHHTCHHHHCSCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTCSHHHHHHHHHTTC
T ss_pred HhCCCcCCCCHHHHhcCCCCCCCChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCcccccCHHHHHHHHHCCC
Confidence 359999999999999753 389999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEcCCCCHHHHHHHHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccc
Q 010640 82 IGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWEN 158 (505)
Q Consensus 82 ~g~i~~~~~~~~~~~~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~ 158 (505)
+|+||+|+++++|+++++++|+++++|..+| ++++|+.|+.|+.++|.+ ++ +||++++..+++|+||||.+|+++
T Consensus 118 iGvIH~n~sie~Qa~~V~~VKr~e~g~i~dP--vtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf 195 (556)
T 4af0_A 118 LGIIHHNCSAEEQAAMVRRVKKYENGFITDP--LCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF 195 (556)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHCCC-------------------------------------------------------
T ss_pred eEEEcCCCCHHHHHHHHHHHHhcccCccCCC--eEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc
Confidence 9999999999999999999999999999999 999999999999999999 88 999997666789999999999998
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCcc-CCCCc
Q 010640 159 LSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTV-GPDGK 236 (505)
Q Consensus 159 ~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~-d~~~~ 236 (505)
. +.++++.++|++ ++++++++.++++|.++|.++++..|||||+ ++|+|+||++|+++...++++ .+ |..++
T Consensus 196 ~-d~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A---~k~d~~gr 269 (556)
T 4af0_A 196 Q-DAETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYA---SKVPESKQ 269 (556)
T ss_dssp -----------------------------------------------------------------CTTC---CBCTTTCC
T ss_pred c-ccceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcc---hhcchhhc
Confidence 5 567899999998 8999999999999999999999999999999 999999999999999999987 65 78899
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v 316 (505)
++++++++..++..++++.|+++|+|++++|.++|++..+++.++++++.+|+++|++|||.|.+.++.|+++|+|++.|
T Consensus 270 L~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkV 349 (556)
T 4af0_A 270 LYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRI 349 (556)
T ss_dssp BCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred eeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEee
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceee
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ 396 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~ 396 (505)
++|+|++|+||...|.|.|+++++.+|+++++++++|||+||||+++.||+|||++|||+||+|++|+.|.|||++.+++
T Consensus 350 GiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~ 429 (556)
T 4af0_A 350 GMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYH 429 (556)
T ss_dssp CSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEE
T ss_pred cCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeEeeeecccCcHHHHhc-----------------cccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHh
Q 010640 397 NGRRVKKYRGMGSLEAMTK-----------------GSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGF 459 (505)
Q Consensus 397 ~~~~~k~~~g~~s~~~~~~-----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m 459 (505)
+|++||.||||||++||++ ++.+|||++..+.+++||+++++||+|++.+++.+|.++||++|
T Consensus 430 ~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m 509 (556)
T 4af0_A 430 EGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSL 509 (556)
T ss_dssp TTEEEEEEECTTSHHHHTTC------------CCSCSSEEECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeecccccHHHHHhcccCCcccccccccccccchhhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhh
Confidence 9999999999999999963 35679999888888999999999999999999999999999999
Q ss_pred hccCCCCHHHHHHhhhcCceeEEEecccccccCccCcceeccccCC
Q 010640 460 QDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVSYEKKSF 505 (505)
Q Consensus 460 ~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 505 (505)
+|+|++||+|||+++++|..||+++|++++.||||||+++|+||-|
T Consensus 510 ~y~Ga~~i~el~~~a~~g~~rf~~iT~ag~~Es~~Hdv~s~~K~l~ 555 (556)
T 4af0_A 510 QDAAIKSVSELHSCARSGSLRFELRTASAQLEGGVHGLNSYTKRLF 555 (556)
T ss_dssp HHTTCSSHHHHHHHHHHTCSCEEECCCC------------------
T ss_pred hccCCCcHHHHHHhhhccCceEEEEChhhhhhcCCCccceeeeecc
Confidence 9999999999999999999999999999999999999999999976
No 2
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=100.00 E-value=1.8e-88 Score=720.26 Aligned_cols=464 Identities=35% Similarity=0.545 Sum_probs=430.8
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+|+++.|+++++.+++|+++.+++|+++|+|+++|+.+|++++++.||+|+||++++++++++++++++
T Consensus 10 ~~t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVTe~~ma~a~a~~GGiGvI~~n~s~e~qa~~V~~Vk 89 (496)
T 4fxs_A 10 ALTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVK 89 (496)
T ss_dssp CCCGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHH
T ss_pred CcCcccEEEecCccccccccccccceeccccccCCCceecCcchhhHHHHHHHHHHcCCcceecCCCCHHHHHHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEe
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSV 179 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v 179 (505)
++.++|+.+| +++++++|+.+++++|.+ ++ +||+|+ +++++|+||.+|+++....+.++.++|++.++++++
T Consensus 90 ~~~~~m~~d~--v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~vtv 164 (496)
T 4fxs_A 90 IFEAGVVTHP--VTVRPEQTIADVMELTHYHGFAGFPVVTE---NNELVGIITGRDVRFVTDLTKSVAAVMTPKERLATV 164 (496)
T ss_dssp HCCC--CBCC--CCBCSSSBHHHHHHHHTSSCCCEEEEECS---SSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGCCEE
T ss_pred ccccccccCc--eEECCCCCHHHHHHHHHHcCCcEEEEEcc---CCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCCEEE
Confidence 9999999999 999999999999999999 77 999998 899999999999987666778999999943458999
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
++++++.+++++|.+++++.+||||+ |+++|+||++|+++...++.+ .+|..+++.+++.++..++..++++.+++
T Consensus 165 ~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a---~~d~~grL~v~aavG~~~d~~~~a~~l~~ 241 (496)
T 4fxs_A 165 KEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNA---CKDEQGRLRVGAAVGAAPGNEERVKALVE 241 (496)
T ss_dssp ECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTC---CBCTTSCBCCEEECCSSSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccch---hhhcccceeeeeeeccccchHHHHHHHHh
Confidence 99999999999999999999999999 999999999999999999887 78899999999999988889999999999
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
+|+|+++++.+++++..+++.++++++.+|++||++|++.+.+.++.+.++|+|+|+++.|+|+.|+++...++|.|+++
T Consensus 242 aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~ 321 (496)
T 4fxs_A 242 AGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQIT 321 (496)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHH
T ss_pred ccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHH
Confidence 99999999999999989999999999999899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccc
Q 010640 339 AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSD 418 (505)
Q Consensus 339 ~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~ 418 (505)
++.++.++++..++|||++|||+++.|+++|+++||++||+|++|+.|.|||++..+++|++||.||||||++||.+++.
T Consensus 322 ~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~ 401 (496)
T 4fxs_A 322 AIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSS 401 (496)
T ss_dssp HHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSC
T ss_pred HHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhcccc
Confidence 99999999888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc--cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCc
Q 010640 419 QRYLGDK--AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHG 496 (505)
Q Consensus 419 ~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~ 496 (505)
+|||++. .+..++||+++++||+|++.+++.+|.++||++|+|+|++||+|||++ ++|+++|+||++||||||
T Consensus 402 ~r~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~-----~~~~~~~~~~~~e~~~h~ 476 (496)
T 4fxs_A 402 DRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK-----AQFVRISGAGMKESHVHD 476 (496)
T ss_dssp CSTTTC---CCCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH-----CCEEECCHHHHHHHSCCS
T ss_pred ccccccccccccccCCccEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC-----CeEEEEccchhhccCCCc
Confidence 9999865 356799999999999999999999999999999999999999999999 599999999999999999
Q ss_pred cee
Q 010640 497 LVS 499 (505)
Q Consensus 497 ~~~ 499 (505)
+..
T Consensus 477 ~~~ 479 (496)
T 4fxs_A 477 VQI 479 (496)
T ss_dssp SCC
T ss_pred ccc
Confidence 875
No 3
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1e-86 Score=706.39 Aligned_cols=463 Identities=37% Similarity=0.557 Sum_probs=298.3
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+|+++.|+++++.+++|+++.+++|+++|+|+++|+.+|++++++.||+|+||.+++++++++++++++
T Consensus 9 ~~t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVTe~~lA~ala~~GGiGvI~~~~~~e~~a~~v~~vk 88 (490)
T 4avf_A 9 ALTFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVK 88 (490)
T ss_dssp ECCGGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTCSHHHHHHHHHHTSEEEECCSSCHHHHHHHHHHHH
T ss_pred CCCcceEEEeCCCCcccccceeeecccccCcccCCCccccchhhhCHHHHHHHHHHcCCCccccCCCCHHHHHHHhhhhc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEe
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSV 179 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v 179 (505)
++.++|..+| +++++++|+.+++++|.+ ++ +||+| +++++|+||.+|+++....+.++.++|++.++++++
T Consensus 89 ~~~~~m~~~~--v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv 162 (490)
T 4avf_A 89 KHETAIVRDP--VTVTPSTKIIELLQMAREYGFSGFPVVE----QGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTA 162 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccCc--eEeCCCCcHHHHHHHHHHhCCCEEEEEE----CCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEEE
Confidence 9999999999 999999999999999999 87 99998 689999999999987666778999999953469999
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
++++++.+++++|.+++++.+||||+ |+++|+||++|+++...++.+ .+|..+++.+++.++...+..++++.+++
T Consensus 163 ~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a---~kd~~grl~v~aavG~~~~~~~~a~~l~~ 239 (490)
T 4avf_A 163 REGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLA---SKDEQGRLRVGAAVGTGADTGERVAALVA 239 (490)
T ss_dssp --------------------------------------------CTTC---CBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcch---hhhccCcceeeeeeccccchHHHHHHHhh
Confidence 99999999999999999999999999 999999999999999999988 78999999999999988889999999999
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
+|+|+++++.+++++..+.+.++++++.+|++||++|++.+.+.|+.+.++|+|+|.++.++|++|.++...++|.|+++
T Consensus 240 aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~ 319 (490)
T 4avf_A 240 AGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQIS 319 (490)
T ss_dssp TTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHH
T ss_pred cccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHH
Confidence 99999999999999989999999999999889999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHH--hcc
Q 010640 339 AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAM--TKG 416 (505)
Q Consensus 339 ~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~--~~~ 416 (505)
++.++.++++..++|||++|||+++.|+++|+++||++||+|++|+.+.|||++..+++|++||.||||||++|| ..+
T Consensus 320 ~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~ 399 (490)
T 4avf_A 320 AIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQG 399 (490)
T ss_dssp HHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC---------------
T ss_pred HHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhccc
Confidence 999999988777899999999999999999999999999999999999999999999999999999999999999 568
Q ss_pred cccccccccc---ccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCc
Q 010640 417 SDQRYLGDKA---KLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGG 493 (505)
Q Consensus 417 ~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~ 493 (505)
+.+|||++.. +..++||+++++||+|++.+++++|.++||++|+|+|++||+|||++ ++|+++|+||++|||
T Consensus 400 ~~~r~~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~-----~~~~~~~~~~~~e~~ 474 (490)
T 4avf_A 400 SSDRYFQDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ-----PQFVRITGAGMAESH 474 (490)
T ss_dssp ------------------------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS-----CCEEEECCC------
T ss_pred ccchhhcccccccccccCCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC-----CEEEEEccchhhcCC
Confidence 9999998653 46799999999999999999999999999999999999999999999 699999999999999
Q ss_pred cCccee
Q 010640 494 VHGLVS 499 (505)
Q Consensus 494 ~~~~~~ 499 (505)
|||+..
T Consensus 475 ~h~~~~ 480 (490)
T 4avf_A 475 VHDVQI 480 (490)
T ss_dssp ------
T ss_pred CCcccc
Confidence 999875
No 4
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=100.00 E-value=2.4e-85 Score=698.64 Aligned_cols=465 Identities=36% Similarity=0.574 Sum_probs=404.5
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+++++.|+++++.+.+|+++.+++|+|+|+|+++|+.+|++++++.||+|+||++++++++..++++++
T Consensus 34 ~~t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvTe~~lAia~a~~GgiGvIh~~~~~~~q~~~V~~V~ 113 (511)
T 3usb_A 34 GLTFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVTEADMAIAMARQGGLGIIHKNMSIEQQAEQVDKVK 113 (511)
T ss_dssp CCCGGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHH
T ss_pred CcceEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhcHHHHHHHHHhcCCceeecccCCHHHHHHHHHHhh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEe
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSV 179 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v 179 (505)
+..++|..+| +++++++|+.+++++|.+ ++ +||+|++ .+++++|+||.+|+++....+.++.++|++ ++++++
T Consensus 114 ~~~~~m~~d~--v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~~lvGiVt~rDl~~~~~~~~~V~~vM~~-~~~vtv 189 (511)
T 3usb_A 114 RSESGVISDP--FFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DERKLVGIITNRDMRFIQDYSIKISDVMTK-EQLITA 189 (511)
T ss_dssp TSSSCSSSSC--CCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTCBEEEEEEHHHHTTCCCSSSBHHHHCCC-CCCCCE
T ss_pred ccccccccCC--EEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCCEEEEEEEehHhhhhccCCCcHHHhccc-CCCEEE
Confidence 9999999999 999999999999999999 87 9999852 147999999999998765667899999996 588999
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
++++++.+++++|.+++++.+||||+ |+++|+||++|+++...++.+ .+|..+++++++.++...+..++++.+++
T Consensus 190 ~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a---~~D~~~rl~V~aavg~~~d~~era~aLve 266 (511)
T 3usb_A 190 PVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNS---AKDKQGRLLVGAAVGVTADAMTRIDALVK 266 (511)
T ss_dssp ETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---CBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccc---hhhhccceeeeeeeeeccchHHHHHHHHh
Confidence 99999999999999999999999999 999999999999999999887 78888999999999888888999999999
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
+|+++++++.+++++..+++.++++++.+|++++++|++.+.+.|+.+.++|+|+|+++.++|++|+++...|||.|++.
T Consensus 267 aGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~ 346 (511)
T 3usb_A 267 ASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLT 346 (511)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHH
T ss_pred hccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccc
Q 010640 339 AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSD 418 (505)
Q Consensus 339 ~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~ 418 (505)
++.++++.++..++|||++|||+++.|++||+++||++|++|++|+.+.|||++..+++|++||.||||+|.+||.+++.
T Consensus 347 ~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~ 426 (511)
T 3usb_A 347 AVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSK 426 (511)
T ss_dssp HHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC---------------
T ss_pred HHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccc
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCcce
Q 010640 419 QRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLV 498 (505)
Q Consensus 419 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 498 (505)
+|||++..+.+++||+++++||+|++++++++|.++||++|+|+|+++++|||++ .+|+++|+++++||||||+.
T Consensus 427 ~r~~~~~~~~~~~eG~~~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~-----~~~~~~~~~~~~e~~~h~~~ 501 (511)
T 3usb_A 427 DRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN-----AQFIRMSGAGLLESHPHHVQ 501 (511)
T ss_dssp -------------------CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH-----CCEEECCHHHHC--------
T ss_pred cchhccccccccCCCcEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC-----CeEEEEcccccccCCCCCCC
Confidence 9999987777899999999999999999999999999999999999999999999 69999999999999999987
Q ss_pred e
Q 010640 499 S 499 (505)
Q Consensus 499 ~ 499 (505)
.
T Consensus 502 ~ 502 (511)
T 3usb_A 502 I 502 (511)
T ss_dssp -
T ss_pred c
Confidence 5
No 5
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=100.00 E-value=5.9e-80 Score=658.13 Aligned_cols=468 Identities=30% Similarity=0.457 Sum_probs=317.9
Q ss_pred hhccCCCCcccceeecCCCCC--CCCCCeeeeeeecC-------cccccceEEEccchhhhHHHHHHHHHHcCCeeEEcC
Q 010640 17 LFSQGYSYTYDDVIFLPHYID--FPIDAVSLSTRLTR-------NIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHS 87 (505)
Q Consensus 17 ~~~~~~~~~~~d~~l~p~~~~--~~~~~~~~~~~lt~-------~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~ 87 (505)
+|+.. +||||||+|+|+|++ +.|+++++.|++|+ ++.+.+|+|+++|+++++.+|++++++.|++|+||.
T Consensus 4 ~~~~~-~~t~~d~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~~vt~~~la~~la~~gg~G~I~~ 82 (503)
T 1me8_A 4 YYNEP-CHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFG 82 (503)
T ss_dssp CCSSC-CCCGGGEEECCCCCCTTCCGGGCBCCEECSCEETTCCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEECC
T ss_pred cccCC-CcccccEEEcCCCCCCccCCCcceeeeeccccccccccceeecCceEeccchhhhHHHHHHHHHhCCCcceeeC
Confidence 56665 999999999999999 99999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC---CeEEEEEecccccc-cc
Q 010640 88 NCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR---SRILGYVTKSDWEN-LS 160 (505)
Q Consensus 88 ~~~~~~~~~~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~---g~lvGivt~~Dl~~-~~ 160 (505)
+++++++++.+.+++..+.+|..+| +++++++|+.+++++|.+ ++ +||+|+ + ++++|+||.+|+++ ..
T Consensus 83 ~~~~e~~~~~v~~V~~~e~gM~~~~--~~v~~~~tv~eal~~m~~~~~s~~pVvd~---~~~~g~lvGiVt~~Dl~~~~~ 157 (503)
T 1me8_A 83 SQSIESQAAMVHAVKNFKAGFVVSD--SNVKPDQTFADVLAISQRTTHNTVAVTDD---GTPHGVLLGLVTQRDYPIDLT 157 (503)
T ss_dssp SSCHHHHHHHHHHHHTTTC-------------------------------------------------------------
T ss_pred CCCHHHHHHHHhhhhhcccCcccCC--eEECCCCcHHHHHHHHHHcCceEEEEEEC---CCcCCeEEEEEEHHHHHhhhc
Confidence 9999999999999988776688888 999999999999999999 77 999996 6 89999999999985 33
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceE
Q 010640 161 DNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMV 239 (505)
Q Consensus 161 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v 239 (505)
....++.++|++.++++++++++++.+++++|.+++++.+||||+ |+++|+||++||++....+.. ..+..+++.+
T Consensus 158 ~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~---~~d~~~~l~v 234 (503)
T 1me8_A 158 QTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE---LVDSQKRYLV 234 (503)
T ss_dssp ----------------------------------------------------------------CCC---CBCTTSCBCC
T ss_pred cccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc---hhcccccccc
Confidence 456789999998223999999999999999999999999999999 999999999999999887665 5667778888
Q ss_pred EEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCC-ceEEEcccCCHHHHHHHHHcCCCEEEEcc
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPE-LDVIGGNVVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~-~~Vi~g~V~t~e~a~~l~~aGad~I~v~~ 318 (505)
++.++. ....+.++.+.+.|++++.++.++|++..+++.++++++.+|+ +++++|++.+.+.++.+.++|+|+++++.
T Consensus 235 ~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 235 GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred ccccCc-hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecc
Confidence 777765 5677889999999999999999999888889999999999877 99999999999999999999999999999
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhc------CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCcc
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQS------GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGA 392 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~------~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~ 392 (505)
|+|++|+++.+.+||.|++.++.++.++++.+ ++|||++|||+++.|++|||++||++|++|++|+.|.||+++
T Consensus 314 ~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~ 393 (503)
T 1me8_A 314 GGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTR 393 (503)
T ss_dssp SCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSC
T ss_pred cCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCc
Confidence 99999999999999999999999999988766 799999999999999999999999999999999999999999
Q ss_pred ceeecCeEeeeecccCcHHHHhccccccc-cccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHH
Q 010640 393 YVYQNGRRVKKYRGMGSLEAMTKGSDQRY-LGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAH 471 (505)
Q Consensus 393 ~~~~~~~~~k~~~g~~s~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~ 471 (505)
..+.+|++||.||||||.++|. .+|| |.+..+.+++||+++++||++++.+.+++|.++||++|+|+|++|++||+
T Consensus 394 ~~~~~g~~~k~~~g~~s~~~~~---~~~~~~~~~~~~~~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~ 470 (503)
T 1me8_A 394 KVTINGSVMKEYWGEGSSRARN---WQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQ 470 (503)
T ss_dssp EEEETTEEEEEEECTTSHHHHC---C--------------CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHH
T ss_pred eEEECCeEEEeecCccchhHhh---ccccccccccceecccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 9999999999999999999985 3899 87666788999999999999999999999999999999999999999999
Q ss_pred HhhhcCceeEEEecccccccCccCcceeccc
Q 010640 472 DLLRSRTLRLEVRTGAAQVEGGVHGLVSYEK 502 (505)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 502 (505)
++ ++|+++|++++.||||||+++..+
T Consensus 471 ~~-----~~~~~~~~~~~~e~~~~~~~~~~~ 496 (503)
T 1me8_A 471 SK-----AKITLVSSVSIVEGGAHDVIVKDR 496 (503)
T ss_dssp HH-----CCEEECCTTCSTTTSCCSCC----
T ss_pred hC-----CCEEEEcccccccCCCccceeecc
Confidence 98 599999999999999999998654
No 6
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=100.00 E-value=2.6e-79 Score=656.69 Aligned_cols=496 Identities=49% Similarity=0.775 Sum_probs=372.2
Q ss_pred CCCCCCCccHHHhhccCCCCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeE
Q 010640 5 PLPIEDGFSADRLFSQGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGI 84 (505)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~ 84 (505)
.|..+||++++++|+++++||||||+|+|+++.++|..+++.++||+++.+.+|+|+++|+++++..|+.++++.|++|+
T Consensus 11 ~~~~~~g~~~~~~~~~~ralt~ddvlLmp~~s~~~p~~v~l~~eLt~~~~~~iP~vsa~md~~t~~~la~~ia~~gg~gi 90 (514)
T 1jcn_A 11 GYVPEDGLTAQQLFASADDLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGF 90 (514)
T ss_dssp CBSSCCCBCHHHHTTSSSCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHTTCEEE
T ss_pred ccccCCCCCHHHHhccCcccccCcEEeccCccCCCcceeEEEeeccCCeeEeceEEEEehhhhhhhhHHHHHHhcCCeeE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-
Q 010640 85 VHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS- 160 (505)
Q Consensus 85 i~~~~~~~~~~~~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~- 160 (505)
++.+.+++++.+.+++++++.++|..+| +++++++++.+++++|.+ ++ +||+|++..+++++|+||.+|++...
T Consensus 91 i~~~~t~e~~~~~v~~v~~~~~im~~~~--~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~ 168 (514)
T 1jcn_A 91 IHHNCTPEFQANEVRKVKNFEQGFITDP--VVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE 168 (514)
T ss_dssp ECCSSCHHHHHHHHHHHHTCCTTSCSSC--CCCCC-----------------CEESCC--------CCEECTTTTC----
T ss_pred EecCCCHHHHHHHHHhhhhhhhccccCC--EEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh
Confidence 9988999999999999999999999999 999999999999999999 77 99998511128999999999997643
Q ss_pred -ccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcce
Q 010640 161 -DNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWM 238 (505)
Q Consensus 161 -~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~ 238 (505)
....++.++|++.++++++++++++.+++++|.+++++.+||||+ |+++|+||++|+++...++.+ .++..+++.
T Consensus 169 ~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~---~~~~~~rl~ 245 (514)
T 1jcn_A 169 KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLA---SKDSQKQLL 245 (514)
T ss_dssp ------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCCCTTC---CBCTTSCBC
T ss_pred ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhhCcch---hcccCCcee
Confidence 346789999986557899999999999999999999999999998 999999999999999988776 677788899
Q ss_pred EEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEcc
Q 010640 239 VGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 239 v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~ 318 (505)
+++.++...+..+.++.++++|+|+++++.++|++...++.++++++.+|++||++|++.+.+.|+.+.++|+|+|+++.
T Consensus 246 vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 246 CGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred eeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECC
Confidence 99998877778899999999999999999999988778899999999988899999999999999999999999999988
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNG 398 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~ 398 (505)
|+|++|+++...+||.|+..++..+.+.++..++|||++|||+++.|+.||+++||++|++|++|+.+.|++++..|++|
T Consensus 326 ~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g 405 (514)
T 1jcn_A 326 GCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDG 405 (514)
T ss_dssp SCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC------
T ss_pred CCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECC
Confidence 88889999888899999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred eEeeeecccCcHHHHhc--cccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhc
Q 010640 399 RRVKKYRGMGSLEAMTK--GSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRS 476 (505)
Q Consensus 399 ~~~k~~~g~~s~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~ 476 (505)
++||.||||+|+++|.. ++.+|||++.++...++|+++.++++|++.+++++|.++||++|+++|++|++||+++++.
T Consensus 406 ~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~ 485 (514)
T 1jcn_A 406 VRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYS 485 (514)
T ss_dssp --------------------------------------------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHHHHT
T ss_pred EEEEEecCcCCHHHHhhccccchhhccccccceecccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhhccc
Confidence 99999999999999976 5779999776666788999999999999999999999999999999999999999999999
Q ss_pred CceeEEEecccccccCccCcceeccccCC
Q 010640 477 RTLRLEVRTGAAQVEGGVHGLVSYEKKSF 505 (505)
Q Consensus 477 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 505 (505)
+.++|+++|+|++.||||||+++|+++.|
T Consensus 486 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 514 (514)
T 1jcn_A 486 GELKFEKRTMSAQIEGGVHGLHSYEKRLY 514 (514)
T ss_dssp TCSCEEECCSSCCC---------------
T ss_pred CceEEEEechhhhhccCCceeEeeccCCC
Confidence 99999999999999999999999998865
No 7
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=100.00 E-value=1.3e-75 Score=623.39 Aligned_cols=470 Identities=33% Similarity=0.486 Sum_probs=327.6
Q ss_pred CccHHHhhccCCCCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCC
Q 010640 11 GFSADRLFSQGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCT 90 (505)
Q Consensus 11 ~~~~~~~~~~~~~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~ 90 (505)
|-+++++|++..+||||||+|+|+|+++.|+++++.|+||+++.+.+|+|+++|+++++.+|++++++.||+|+++.+++
T Consensus 2 g~~~~~~~~~~~~~~~dd~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~vt~~ela~ava~~GglG~i~~~~~ 81 (486)
T 2cu0_A 2 GKFVEKLEKAIKGYTFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMG 81 (486)
T ss_dssp -CHHHHHHTCCCCCCGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSC
T ss_pred cccHHHHhcCCCCcCccCEEEcCCcCCCCcceEEEEeeecCCcccccceEEccceeecHHHHHHHHHhcCCceeecCCCC
Confidence 45789999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccc
Q 010640 91 AADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIF 167 (505)
Q Consensus 91 ~~~~~~~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~ 167 (505)
++++.++++++++..+.|..++ +++++++++.+++++|.+ ++ +||++ +++++|+||.+|++. ..+.++.
T Consensus 82 ~e~~~~~I~~v~~~~~~m~~~~--~~v~~~~tv~ea~~~~~~~~~~~~pVvd----~~~lvGivt~~Dl~~--~~~~~v~ 153 (486)
T 2cu0_A 82 IEEQVEQVKRVKRAERLIVEDV--ITIAPDETVDFALFLMEKHGIDGLPVVE----DEKVVGIITKKDIAA--REGKLVK 153 (486)
T ss_dssp HHHHHHHHHHHHTCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHhhcchhhccccCc--eEECCCCCHHHHHHHHHHcCCcEEEEEE----CCEEEEEEEHHHhcc--CCCCCHH
Confidence 9999999999999998999888 999999999999999999 77 99998 589999999999976 4567899
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCC
Q 010640 168 DYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTR 246 (505)
Q Consensus 168 ~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~ 246 (505)
++|++ +++++++++++.+++++|.+++++.+||||+ |+++|+||++||++...++.. .++..+.+.++..+..
T Consensus 154 ~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~~~---~~~~~g~~~v~~~~~~- 227 (486)
T 2cu0_A 154 ELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKNA---VRDENGELLVAAAVSP- 227 (486)
T ss_dssp -------------------------------------------------------CCTTC---CBCTTSCBCCEEEECT-
T ss_pred HHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhcccc---ccccCCceeecceech-
Confidence 99998 8999999999999999999999999999999 999999999999999876544 4555667777777654
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
.+ .+++..+.+.|+++++++..+|+...+++.++++++.+ ++|+++|++.+.+.++.+. |+|+|.++.|+|+.|++
T Consensus 228 ~~-~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~~-~vpvi~k~v~~~~~a~~l~--G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 228 FD-IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKV-DADFIVGNIANPKAVDDLT--FADAVKVGIGPGSICTT 303 (486)
T ss_dssp TC-HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTC-CSEEEEEEECCHHHHTTCT--TSSEEEECSSCSTTBCH
T ss_pred hh-HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHHh-CCccccCCcCCHHHHHHhh--CCCeEEEeeeeccceee
Confidence 45 77888999999999999998899888999999999988 8999999999999999988 99999999999999999
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRG 406 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g 406 (505)
+...+||.|++.++.++++.++..++|||++|||+++.|++|||++||++|++|++|+.|.||+++..+.+|++||.|||
T Consensus 304 r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g 383 (486)
T 2cu0_A 304 RIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRG 383 (486)
T ss_dssp HHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEEC
T ss_pred eEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeec
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHhccccccccccc---cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEE
Q 010640 407 MGSLEAMTKGSDQRYLGDK---AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEV 483 (505)
Q Consensus 407 ~~s~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~ 483 (505)
|+|..||..++.+|||+++ .+..+++|+++.+|++|++++++++|.++||++|+++|++++.+||++ ..|++
T Consensus 384 ~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~-----~~~~~ 458 (486)
T 2cu0_A 384 MGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEK-----GEFVI 458 (486)
T ss_dssp TTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH-----CCEEE
T ss_pred CCCHHHHhcccccccccccccccccccccceEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhh-----CCEEE
Confidence 9999999888899999864 234578999999999999999999999999999999999999999998 69999
Q ss_pred ecccccccCccCcceecccc
Q 010640 484 RTGAAQVEGGVHGLVSYEKK 503 (505)
Q Consensus 484 ~~~~~~~e~~~~~~~~~~~~ 503 (505)
+|+++++||||||++++.++
T Consensus 459 ~~~~~~~e~~~~~~~~~~~~ 478 (486)
T 2cu0_A 459 ITHAGIKESHPHDIIITNEA 478 (486)
T ss_dssp CCHHHHHHHSCCSSCCSCCC
T ss_pred EcccccccCCCcccceeccC
Confidence 99999999999999987653
No 8
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=100.00 E-value=6.3e-75 Score=620.38 Aligned_cols=468 Identities=37% Similarity=0.569 Sum_probs=301.2
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+|+.+.|.++++.++||+++.+.+|+|+++|+++++.+|++++++.||+|+++.++++++++..+.+++
T Consensus 16 ~~~~~dvll~p~~s~~~p~~v~~~~eLt~~~~l~iP~is~~m~~v~~~~lA~al~~~GglG~i~~~~~~e~~~~~v~~v~ 95 (494)
T 1vrd_A 16 ALTFDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQARQVSIVK 95 (494)
T ss_dssp CCCGGGEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHH
T ss_pred ccccccEEeccccccCCCCceEEEehhhCCCccCceeEecchHHHhHHHHHHHHHHcCCceEEecCCChHHHHHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEe
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSV 179 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v 179 (505)
++.++|..++ +++++++++.+++++|.+ ++ +||+|+ +++++|+||.+|+++....+.++.++|++.++++++
T Consensus 96 ~~~~iM~~~~--~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v 170 (494)
T 1vrd_A 96 KTENGIIYDP--ITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EGRLVGLLTNRDVRFEKNLSKKIKDLMTPREKLIVA 170 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCC--eEECCCCCHHHHHHHHHHcCceEEEEEcC---CCEEEEEEEHHHHHhhcCCCCcHHHHhCCCCCCeEE
Confidence 9999999988 999999999999999999 77 999997 799999999999986545567899999865578999
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
++++++.+++++|.+++++.+||||+ |+++|+||++|+++...++.. .+|..+++.+++.++...+..++++.+++
T Consensus 171 ~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~---~~D~~~~l~vga~ig~~~~~~~~a~~l~~ 247 (494)
T 1vrd_A 171 PPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHPNA---ARDEKGRLLVGAAVGTSPETMERVEKLVK 247 (494)
T ss_dssp --------------------------------------CHHHHTCTTC---CBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccccc---cccchhhhccccccCcCHhHHHHHHHHHH
Confidence 99999999999999999999999998 999999999999999988766 66777888898888776778899999999
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
+|++++.++..+|+....++.++++++.+|++||++|++.+.++++.+.++|+|+|.+++++|+++.++...+|+.|+..
T Consensus 248 aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~ 327 (494)
T 1vrd_A 248 AGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLT 327 (494)
T ss_dssp TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHH
T ss_pred hCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHH
Confidence 99999999998898888899999999999889999999999999999999999999999888888888888899999999
Q ss_pred HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccc
Q 010640 339 AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSD 418 (505)
Q Consensus 339 ~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~ 418 (505)
++.++.+.++..++|||++|||+++.|++||+++||++|++|++|+.|.||+++..+++|+.+|.||||+|..||..|+.
T Consensus 328 ~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~ 407 (494)
T 1vrd_A 328 AVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSA 407 (494)
T ss_dssp HHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC----------
T ss_pred HHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccc
Confidence 99999988877789999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred ccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCcce
Q 010640 419 QRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLV 498 (505)
Q Consensus 419 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 498 (505)
+|||+++....+++|+++.+++++++++++++|.++||++|+++|++++.+||+. ..|+++|++++.||||||++
T Consensus 408 ~~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~-----~~~~~~~~~~~~e~~~~~~~ 482 (494)
T 1vrd_A 408 DRYGQEGENKFVPEGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEK-----AVFVKITPAGVKESHPHDII 482 (494)
T ss_dssp ---------------CBCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHH-----CCEEECC-------------
T ss_pred cchhhcccccccCCcceEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhh-----CCEEEEcccccccCCCccce
Confidence 9999987556689999999999999999999999999999999999999999998 58999999999999999999
Q ss_pred ecccc
Q 010640 499 SYEKK 503 (505)
Q Consensus 499 ~~~~~ 503 (505)
++.++
T Consensus 483 ~~~~~ 487 (494)
T 1vrd_A 483 ITKES 487 (494)
T ss_dssp -----
T ss_pred eeccC
Confidence 87654
No 9
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=100.00 E-value=7.3e-72 Score=596.71 Aligned_cols=475 Identities=32% Similarity=0.551 Sum_probs=430.0
Q ss_pred ccHHHhhccCCCCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCH
Q 010640 12 FSADRLFSQGYSYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTA 91 (505)
Q Consensus 12 ~~~~~~~~~~~~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~ 91 (505)
++ +++|. .+||||||+|+|+++.+.|+++++.++||+.+.+.+|+++++|+++++++|+.++++.||+|+++.++++
T Consensus 3 ~~-~~~~~--~~~~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt~~eLa~av~~~Gg~G~i~~~~~~ 79 (491)
T 1zfj_A 3 WD-TKFLK--KGYTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSI 79 (491)
T ss_dssp GG-GSSCC--CCCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCH
T ss_pred cc-hhhhc--cCCChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhccHHHHHHHHHHcCCceEEeCCCCH
Confidence 45 56666 4799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEe--CCCCCCeEEEEEecccccccccccccc
Q 010640 92 ADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTE--SGTRRSRILGYVTKSDWENLSDNKVKI 166 (505)
Q Consensus 92 ~~~~~~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd--~~~~~g~lvGivt~~Dl~~~~~~~~~v 166 (505)
+++.+++++++++.++|..++ +++++++++.+++++|.+ ++ +||+| + +++++|+||.+|++.....+.++
T Consensus 80 e~~~~~i~~v~~~~~im~~~~--~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~---~~~lvGivt~~Dl~~~~~~~~~v 154 (491)
T 1zfj_A 80 TEQAEEVRKVKRSENGVIIDP--FFLTPEHKVSEAEELMQRYRISGVPIVETLA---NRKLVGIITNRDMRFISDYNAPI 154 (491)
T ss_dssp HHHHHHHHHHHHHTTTTSSSC--CCBCSSSBHHHHHHHHHHTTCSEEEEESCTT---TCBEEEEEEHHHHHHCSCSSSBT
T ss_pred HHHHHHHHHHhhHHhcCcCCC--eEECCCCcHHHHHHHHHHcCCCEEEEEEeCC---CCEEEEEEEHHHHhhhccCCCcH
Confidence 999999999988899999888 999999999999999988 76 99998 6 89999999999998554567789
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecC
Q 010640 167 FDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGT 245 (505)
Q Consensus 167 ~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~ 245 (505)
.++|++ .+++++++++++.+++++|.+++++.+||||+ |+++|+||++||++....+.+ .++..+++.++..++.
T Consensus 155 ~~im~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~---~~d~~~~~~vg~~i~~ 230 (491)
T 1zfj_A 155 SEHMTS-EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHA---AKDEFGRLLVAAAVGV 230 (491)
T ss_dssp TTSCCC-SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---CBCTTSCBCCEEEECS
T ss_pred HHHcCC-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhcccc---ccCcCCcEEEEEeccC
Confidence 999984 26789999999999999999999999999999 999999999999999987665 5666677888888776
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.....++++.+.++|+|.++++.+.|+...+++.++++++.+|++|++.|++.+.+.++.+.++|+|+|.+++|+|+.+.
T Consensus 231 ~~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~ 310 (491)
T 1zfj_A 231 TSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICT 310 (491)
T ss_dssp STTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBC
T ss_pred chhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceE
Confidence 66788999999999999999999888888889999999999888999999999999999999999999999999999999
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeec
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYR 405 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~ 405 (505)
++...+|+.|++.++.++...+...++|||++|||+++.|++||+++||++|++|++|+.+.|++++..+.+|++||.||
T Consensus 311 tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~ 390 (491)
T 1zfj_A 311 TRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYR 390 (491)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEE
T ss_pred EeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEe
Confidence 99899999999999999998887778999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcHHHHhcccccccccccc---ccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEE
Q 010640 406 GMGSLEAMTKGSDQRYLGDKA---KLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLE 482 (505)
Q Consensus 406 g~~s~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~ 482 (505)
||+|.+||..++.+|||+|+. ...+++|+++.++++++++++++.|.++||++|+++|++++.+||++ ..|+
T Consensus 391 g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~-----~~~~ 465 (491)
T 1zfj_A 391 GMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHEN-----AQFV 465 (491)
T ss_dssp CTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH-----CCEE
T ss_pred cccCHHHHhccccccccccccccccccCcCcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhc-----CcEE
Confidence 999999998888899998762 34478999999999999999999999999999999999999999998 5899
Q ss_pred EecccccccCccCcceecccc
Q 010640 483 VRTGAAQVEGGVHGLVSYEKK 503 (505)
Q Consensus 483 ~~~~~~~~e~~~~~~~~~~~~ 503 (505)
++|+++++||||||++++.++
T Consensus 466 ~~~~~~~~e~~~~~~~~~~~~ 486 (491)
T 1zfj_A 466 EMSGAGLIESHPHDVQITNEA 486 (491)
T ss_dssp ECCHHHHHHHSCCSSCCSSCB
T ss_pred EEcccccccCCCccceeeccC
Confidence 999999999999999988765
No 10
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=100.00 E-value=1.5e-69 Score=554.74 Aligned_cols=381 Identities=39% Similarity=0.580 Sum_probs=278.7
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+++++.|+++++.|+||+.+.+++|||+++|+++++++|++++++.||+|+||.+++++++++++++++
T Consensus 9 ~~t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~~~~~e~~~~~i~~vk 88 (400)
T 3ffs_A 9 GLTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVK 88 (400)
T ss_dssp ECCGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHH
T ss_pred CCCceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPAN 182 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 182 (505)
+.++.+..+| ++ | . . +++ +++
T Consensus 89 ~~~~g~~~~P--~~--~-----------------~-~-----------------------------------nL~--~~~ 109 (400)
T 3ffs_A 89 NWISNLEKNE--ST--P-----------------D-Q-----------------------------------NLD--KES 109 (400)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred hhccCcccCC--CC--c-----------------c-c-----------------------------------ccc--CCC
Confidence 9887666666 21 0 0 0 100 011
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCcc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVN 262 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad 262 (505)
.++.+ ++|+.+...++.+ .++..+++.+++.++..+ .+.++.++++|+|
T Consensus 110 ~~~~~--------------------------~~~~~~~~~~p~~---~~d~~g~l~v~~~v~~~~--~e~~~~lveaGvd 158 (400)
T 3ffs_A 110 TDGKD--------------------------TKSNNNIDAYSNE---NLDNKGRLRVGAAIGVNE--IERAKLLVEAGVD 158 (400)
T ss_dssp ---------------------------------------CCTTC---CBCTTSSBCCEEEECCC---CHHHHHHHHHTCS
T ss_pred CCHHH--------------------------HHHHHHhhhCcch---hhccccceeEEeecCCCH--HHHHHHHHHcCCC
Confidence 11111 2334444455555 567778888888887654 7899999999999
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHH
Q 010640 263 VVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYK 342 (505)
Q Consensus 263 ~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~ 342 (505)
++++++++|++..+.+.++++++.+ +++|++|++.|.+.|+.+.++|+|+|+++.++|+.|+++...+++.|++.++.+
T Consensus 159 vIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~ 237 (400)
T 3ffs_A 159 VIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEK 237 (400)
T ss_dssp EEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHH
T ss_pred EEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHH
Confidence 9999999998888899999999988 899999999999999999999999999987778888888888899999999999
Q ss_pred HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccc
Q 010640 343 VSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYL 422 (505)
Q Consensus 343 v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~ 422 (505)
+.+.++..++|||++|||.++.|+++|+++||++||+|++|+.|+|||++..+.||++||.||||||++||.+++.+|||
T Consensus 238 v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~ 317 (400)
T 3ffs_A 238 CSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYF 317 (400)
T ss_dssp HHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCCEEESSSSEEEC-------------------
T ss_pred HHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhh
Confidence 99888777899999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred ccc--cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCccee
Q 010640 423 GDK--AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVS 499 (505)
Q Consensus 423 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 499 (505)
++. .+..++||+++++||+|+++++|.+|.++||++|+|+|++||+|||++ ++|+++|++++.||||||+..
T Consensus 318 ~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~-----~~f~~~t~~~~~e~~~h~~~~ 391 (400)
T 3ffs_A 318 QEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK-----SSYVEITTSGLRESHVHDVEI 391 (400)
T ss_dssp ----------------CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH-----CCEEECCC-------------
T ss_pred cccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhC-----CeEEEEccchhhcCCCCCccc
Confidence 864 456799999999999999999999999999999999999999999999 699999999999999999875
No 11
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=100.00 E-value=7.6e-65 Score=516.13 Aligned_cols=343 Identities=42% Similarity=0.650 Sum_probs=304.8
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+++++.++++++.|+||+.+.+++|+|+++|+++++.+|++++++.||+|+++.+++++++.+++++++
T Consensus 13 ~~~fddv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~s~e~~~~~i~~vk 92 (366)
T 4fo4_A 13 ALTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVK 92 (366)
T ss_dssp CCCGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHH
T ss_pred cCCcceEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999888887776
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPAN 182 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 182 (505)
+.. +
T Consensus 93 ~~~------~---------------------------------------------------------------------- 96 (366)
T 4fo4_A 93 ISG------G---------------------------------------------------------------------- 96 (366)
T ss_dssp TTT------S----------------------------------------------------------------------
T ss_pred hcC------c----------------------------------------------------------------------
Confidence 531 1
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCcc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVN 262 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad 262 (505)
+.+++.++...+..++++.++++|+|
T Consensus 97 ------------------------------------------------------l~vga~vg~~~~~~~~~~~lieaGvd 122 (366)
T 4fo4_A 97 ------------------------------------------------------LRVGAAVGAAPGNEERVKALVEAGVD 122 (366)
T ss_dssp ------------------------------------------------------CCCEEECCSCTTCHHHHHHHHHTTCS
T ss_pred ------------------------------------------------------eeEEEEeccChhHHHHHHHHHhCCCC
Confidence 00111222223356889999999999
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHH
Q 010640 263 VVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYK 342 (505)
Q Consensus 263 ~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~ 342 (505)
+++++.++|++..+++.++++++.+|+++|++|++.|.+.++.+.++|+|+|+++.++|++|+++...++|.|+++++.+
T Consensus 123 ~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~ 202 (366)
T 4fo4_A 123 VLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIAD 202 (366)
T ss_dssp EEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHH
Confidence 99999999988888999999999998999999999999999999999999999988889999999889999999999999
Q ss_pred HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccc
Q 010640 343 VSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYL 422 (505)
Q Consensus 343 v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~ 422 (505)
++++++..++|||++|||.++.|+++||++||++|++|++|+.|.|||++..+++|++||.||||||+.||++++.+|||
T Consensus 203 v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~ 282 (366)
T 4fo4_A 203 AAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYF 282 (366)
T ss_dssp HHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC-------
T ss_pred HHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcccccchh
Confidence 99888878999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred ccc--cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCcceec
Q 010640 423 GDK--AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVSY 500 (505)
Q Consensus 423 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 500 (505)
++. .+..++||+++++||+|++++++.+|.++||++|+|+|++||+|||++ ++|+++|+++++||||||+..-
T Consensus 283 ~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~-----~~f~~~t~~~~~e~~~h~~~~~ 357 (366)
T 4fo4_A 283 QTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK-----AQFVRISGAGMKESHVHDVQIT 357 (366)
T ss_dssp --------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH-----CCEEECCHHHHHHHSCCSSCCS
T ss_pred ccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC-----CeEEEEccchhhccCCCCCccc
Confidence 864 356799999999999999999999999999999999999999999999 5999999999999999998753
No 12
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=100.00 E-value=5e-62 Score=496.56 Aligned_cols=339 Identities=43% Similarity=0.632 Sum_probs=270.7
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+||||||+|+|+++++.++++++.|+||+.+.+.+|+++++|+++++.+|++++++.||+|+++.+++++++.+.+++++
T Consensus 12 ~~~fddv~l~p~~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~~s~e~~~~~I~~vk 91 (361)
T 3khj_A 12 GLTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVK 91 (361)
T ss_dssp CCCGGGEEECCCCBCCCGGGCCCCEESSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHH
T ss_pred CCCcceEEEECCCCCCCHHHccCceecccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988887777665
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPAN 182 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 182 (505)
...+ -|
T Consensus 92 ~~~~----~p---------------------------------------------------------------------- 97 (361)
T 3khj_A 92 NSGG----LR---------------------------------------------------------------------- 97 (361)
T ss_dssp HTTC----CC----------------------------------------------------------------------
T ss_pred hccC----ce----------------------------------------------------------------------
Confidence 4221 11
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCcc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVN 262 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad 262 (505)
++++++... .++++.++++|+|
T Consensus 98 --------------------------------------------------------vga~ig~~~--~e~a~~l~eaGad 119 (361)
T 3khj_A 98 --------------------------------------------------------VGAAIGVNE--IERAKLLVEAGVD 119 (361)
T ss_dssp --------------------------------------------------------CEEEECTTC--HHHHHHHHHTTCS
T ss_pred --------------------------------------------------------EEEEeCCCH--HHHHHHHHHcCcC
Confidence 112222222 6788899999999
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHH
Q 010640 263 VVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYK 342 (505)
Q Consensus 263 ~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~ 342 (505)
+++++.++|++..+.+.++++++.+ ++||++|++.+.+.++.+.++|+|+|.++.++|++|.++...++|.|+++++.+
T Consensus 120 ~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~ 198 (361)
T 3khj_A 120 VIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEK 198 (361)
T ss_dssp EEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHH
T ss_pred eEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHH
Confidence 9999999998888889999999988 899999999999999999999999999988888899999889999999999999
Q ss_pred HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccc
Q 010640 343 VSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYL 422 (505)
Q Consensus 343 v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~ 422 (505)
+++.++..++|||++|||+++.|+++++++||++|++|++|+.+.|||++..+.+|++||.||||||+.||.+++.+|||
T Consensus 199 v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~~~~~y~ 278 (361)
T 3khj_A 199 CSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYF 278 (361)
T ss_dssp HHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC------------------
T ss_pred HHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhccchhhhh
Confidence 99888777899999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred ccc--cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCccee
Q 010640 423 GDK--AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVS 499 (505)
Q Consensus 423 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 499 (505)
++. .+..++||+++++||+|++++++.+|.++||++|+|+|++||+|||++ ++|+++|+++++||||||+..
T Consensus 279 ~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~e~~~h~~~~ 352 (361)
T 3khj_A 279 QEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK-----SSYVEITTSGLRESHVHDVEI 352 (361)
T ss_dssp ---------------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH-----CCEEECCC-------------
T ss_pred cccccccccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC-----CeEEEEccchhhcCCCCCccc
Confidence 864 456799999999999999999999999999999999999999999999 699999999999999999875
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=9.2e-59 Score=468.47 Aligned_cols=327 Identities=31% Similarity=0.473 Sum_probs=280.8
Q ss_pred CCcccceeecCCCCCCCC-CCee--eeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHH
Q 010640 23 SYTYDDVIFLPHYIDFPI-DAVS--LSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVV 99 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~-~~~~--~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~ 99 (505)
+|+||||.|+|+++...+ +++| +.|+| +++++++|+++|||+++++.+|++++++.||+|+++.+++++++.+.++
T Consensus 7 ~~~fddv~l~P~~~~~~~r~~vd~~~~t~l-~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~ 85 (361)
T 3r2g_A 7 AITFDDVLLVPSYNHHESRRVVETTSTDRL-GKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFK 85 (361)
T ss_dssp CCCGGGEEECCCCCCSCTTCCCCCCEECTT-SSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHH
T ss_pred ccccceEEEECCCCCCCccccccceeeEEE-CCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHh
Confidence 799999999999998877 6754 55688 7999999999999999999999999999999999999988888776665
Q ss_pred hhhccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEe
Q 010640 100 SAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSV 179 (505)
Q Consensus 100 ~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v 179 (505)
+++...
T Consensus 86 ~~~~~~-------------------------------------------------------------------------- 91 (361)
T 3r2g_A 86 KCKGPV-------------------------------------------------------------------------- 91 (361)
T ss_dssp TCCSCC--------------------------------------------------------------------------
T ss_pred hcceEE--------------------------------------------------------------------------
Confidence 332100
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHc
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKA 259 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~liea 259 (505)
++.++..+...+.++.++++
T Consensus 92 ------------------------------------------------------------~~~~g~~~~~~e~~~~a~~a 111 (361)
T 3r2g_A 92 ------------------------------------------------------------FVSVGCTENELQRAEALRDA 111 (361)
T ss_dssp ------------------------------------------------------------BEEECSSHHHHHHHHHHHHT
T ss_pred ------------------------------------------------------------EEEcCCCHHHHHHHHHHHHc
Confidence 01122233466788999999
Q ss_pred CccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHH
Q 010640 260 GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATA 339 (505)
Q Consensus 260 Gad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~ 339 (505)
|+|++++|.++|++..+++.++++|+.+|+++|++|++.|.++|+.+.++|+|+|+|++++|+.|.++...+++.|++.+
T Consensus 112 GvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~a 191 (361)
T 3r2g_A 112 GADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTC 191 (361)
T ss_dssp TCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHH
T ss_pred CCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHH
Confidence 99999999999988888999999999988899999999999999999999999999998888888888888899999888
Q ss_pred HHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceee-cCeEeeeecccCcHHHHhcccc
Q 010640 340 VYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ-NGRRVKKYRGMGSLEAMTKGSD 418 (505)
Q Consensus 340 l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~-~~~~~k~~~g~~s~~~~~~~~~ 418 (505)
+.++.+.+ . |||++|||+++.|++|||++|||+|++|++|+.+.|||++..++ ||++||.||||||. +.
T Consensus 192 I~~~~~~~---~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~------~~ 261 (361)
T 3r2g_A 192 IQDCSRAD---R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASR------EA 261 (361)
T ss_dssp HHHHTTSS---S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHH------HH
T ss_pred HHHHHHhC---C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCc------ch
Confidence 87775432 2 99999999999999999999999999999999999999999999 99999999999993 35
Q ss_pred ccccccc-cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCcc
Q 010640 419 QRYLGDK-AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGL 497 (505)
Q Consensus 419 ~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~ 497 (505)
+|||++. ++.+++||+++++|++|++++++.+|.++||++|+|+|++||+||+++ ++|+++|++|++||||||+
T Consensus 262 ~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~-----~~~~~~~~~~~~e~~~h~~ 336 (361)
T 3r2g_A 262 QEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRK-----LNYVIVTQAGRIESLPHKL 336 (361)
T ss_dssp HHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT-----CCEEECCSTTC--------
T ss_pred hhhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC-----CeEEEEccchhhccCCccc
Confidence 7899764 455699999999999999999999999999999999999999999999 6999999999999999998
Q ss_pred ee
Q 010640 498 VS 499 (505)
Q Consensus 498 ~~ 499 (505)
..
T Consensus 337 ~~ 338 (361)
T 3r2g_A 337 LE 338 (361)
T ss_dssp --
T ss_pred cc
Confidence 64
No 14
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=3.9e-49 Score=400.80 Aligned_cols=322 Identities=30% Similarity=0.437 Sum_probs=279.7
Q ss_pred CCcccceeecCCCCCCCC-CCeeeeeeec----CcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHH
Q 010640 23 SYTYDDVIFLPHYIDFPI-DAVSLSTRLT----RNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARL 97 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~-~~~~~~~~lt----~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~ 97 (505)
.++|||+.|+|.++.+.+ +++++.++|+ +++.+.+|++++||+..++.+|++++++.||+|+++.+++++++...
T Consensus 19 ~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~s~e~~~~~ 98 (351)
T 2c6q_A 19 SLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEF 98 (351)
T ss_dssp CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTCCHHHHHHH
T ss_pred CCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCCCHHHHHHH
Confidence 799999999999988777 7999999998 78999999999999999999999999999999999999888887665
Q ss_pred HHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCce
Q 010640 98 VVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNV 177 (505)
Q Consensus 98 v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~ 177 (505)
+++ +| . ... +
T Consensus 99 i~~----------~p-------------------------------~------------------------~l~---~-- 108 (351)
T 2c6q_A 99 AGQ----------NP-------------------------------D------------------------CLE---H-- 108 (351)
T ss_dssp HHH----------CG-------------------------------G------------------------GCT---T--
T ss_pred Hhh----------Cc-------------------------------h------------------------hhh---e--
Confidence 432 22 0 000 0
Q ss_pred EecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHH
Q 010640 178 SVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLV 257 (505)
Q Consensus 178 ~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li 257 (505)
+++..+...+..++++.++
T Consensus 109 -------------------------------------------------------------v~~~~g~~~~~~~~~~~l~ 127 (351)
T 2c6q_A 109 -------------------------------------------------------------LAASSGTGSSDFEQLEQIL 127 (351)
T ss_dssp -------------------------------------------------------------EEEEECSSHHHHHHHHHHH
T ss_pred -------------------------------------------------------------eEeecCCChHHHHHHHHHH
Confidence 0001111222346677777
Q ss_pred Hc--CccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcC
Q 010640 258 KA--GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRG 335 (505)
Q Consensus 258 ea--Gad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p 335 (505)
+. |+++++++.++|++..+++.++++++.+|++||++|++.+.++|+.+.++|+|+|+|++|+|+++.++.+.+|+.|
T Consensus 128 ~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p 207 (351)
T 2c6q_A 128 EAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYP 207 (351)
T ss_dssp HHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCC
T ss_pred hccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCcc
Confidence 76 9999999988888878899999999998889999999999999999999999999999888888888888999999
Q ss_pred hHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhc
Q 010640 336 QATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTK 415 (505)
Q Consensus 336 ~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~ 415 (505)
++.++.++.+.++..++|||++|||+++.|++|||++||++|++|++|+.|.||+++..+++|++||.||||+|.++|..
T Consensus 208 ~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~ 287 (351)
T 2c6q_A 208 QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKK 287 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhc
Confidence 99999999988877789999999999999999999999999999999999999999999999999999999999999875
Q ss_pred --cccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEeccc
Q 010640 416 --GSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGA 487 (505)
Q Consensus 416 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~ 487 (505)
++.+||+ .++|+++.+||+|++.+.+++|.++||++|+|+|++|++||+++ ..|+++|++
T Consensus 288 ~~g~~~~~~-------~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~-----~~~v~~~~~ 349 (351)
T 2c6q_A 288 YAGGVAEYR-------ASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRR-----TTFIRVTQQ 349 (351)
T ss_dssp HSSSCCTTC-------CCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHH-----CCEEEC---
T ss_pred ccccccccc-------cccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhC-----CcEEEEecC
Confidence 5556665 35899999999999999999999999999999999999999998 699999976
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=100.00 E-value=1.9e-49 Score=412.69 Aligned_cols=393 Identities=36% Similarity=0.544 Sum_probs=274.8
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhhh
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSAK 102 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v~ 102 (505)
+++|||+.|+|+++.+.++++++.++|++++.+..|++++||+.+++.+++.++++.||+|+++..++++++...+.+++
T Consensus 9 ~~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s~e~~~~~~~~~~ 88 (404)
T 1eep_A 9 ALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRKEIEKVK 88 (404)
T ss_dssp CCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHH
T ss_pred CCCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHH
Confidence 79999999999999888889999999998899999999999999999999999999999999998889988887776655
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPAN 182 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 182 (505)
+... .+ |+++.+|+.+.. . ++.+....
T Consensus 89 ~~~~-------------------------------------~~---g~~~~~~~~~~~------~-------~l~~~~~~ 115 (404)
T 1eep_A 89 TYKF-------------------------------------QK---TINTNGDTNEQK------P-------EIFTAKQH 115 (404)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred hhcc-------------------------------------CC---Cceecccccccc------c-------cccccCCC
Confidence 4321 01 334444432110 0 11111111
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCcc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVN 262 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad 262 (505)
..+++ +.+++.....++.. .++..+++.++++++..++..+.++.++++|+|
T Consensus 116 ~~~~~-------------------------~~~~~~~~~~~p~~---~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~G~d 167 (404)
T 1eep_A 116 LEKSD-------------------------AYKNAEHKEDFPNA---CKDLNNKLRVGAAVSIDIDTIERVEELVKAHVD 167 (404)
T ss_dssp ---------------------------------------CCTTC---CBCTTSCBCCEEEECSCTTHHHHHHHHHHTTCS
T ss_pred CCHHH-------------------------HHHHHHHhhhcchh---hhhcccCceEEEEeCCChhHHHHHHHHHHCCCC
Confidence 11111 01111111122221 233445566677776555678888899999999
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHH
Q 010640 263 VVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYK 342 (505)
Q Consensus 263 ~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~ 342 (505)
++.++.+++++...++.++++++.++++||+++++.+.+.++.+.++|+|+|.++.++|.++.++...+||.|++.++.+
T Consensus 168 ~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~ 247 (404)
T 1eep_A 168 ILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICD 247 (404)
T ss_dssp EEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHH
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHH
Confidence 99998888877778999999999987899998899999999999999999999987777777777778888999999999
Q ss_pred HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccc
Q 010640 343 VSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYL 422 (505)
Q Consensus 343 v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~ 422 (505)
+.+.++..++|||++|||+++.|+.+++++||++|++|++|+.+.||+++..|++|+.+|.||||++.++|.+++.++||
T Consensus 248 v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~ 327 (404)
T 1eep_A 248 VYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYF 327 (404)
T ss_dssp HHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC-------------------
T ss_pred HHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchh
Confidence 98887767899999999999999999999999999999999999999999999999999999999999999888889999
Q ss_pred ccc---cccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCccee
Q 010640 423 GDK---AKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVS 499 (505)
Q Consensus 423 ~~~---~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 499 (505)
.+. ....+++|+++.+++++++.+++++|.++||++|.++|+++++||+++ ..|+++|+++++||||||+++
T Consensus 328 ~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~-----~~~~~~~~~~~~e~~~~~~~~ 402 (404)
T 1eep_A 328 QLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKIN-----SKFVKISHSSLKESHPHDVFS 402 (404)
T ss_dssp -----------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS-----CCEEECCCC------------
T ss_pred cccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhc-----CcEEEEchhhhccCcCceeee
Confidence 743 234578999999999999999999999999999999999999999998 699999999999999999998
Q ss_pred cc
Q 010640 500 YE 501 (505)
Q Consensus 500 ~~ 501 (505)
|+
T Consensus 403 ~~ 404 (404)
T 1eep_A 403 IT 404 (404)
T ss_dssp --
T ss_pred cC
Confidence 74
No 16
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=1.1e-40 Score=338.13 Aligned_cols=317 Identities=26% Similarity=0.400 Sum_probs=240.4
Q ss_pred CCcccceeecCCCC-CCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCCCHHHHHHHHHhh
Q 010640 23 SYTYDDVIFLPHYI-DFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNCTAADQARLVVSA 101 (505)
Q Consensus 23 ~~~~~d~~l~p~~~-~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~~~~~~~~~v~~v 101 (505)
.++|||+.|+|.+. ....+++++.++|+ ++++..|++.|+|.+++..+++.++++.|++|++...+. +.....++
T Consensus 13 ~~~fd~v~l~p~~~~~~~~~~vdl~t~i~-g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~-~~~~~~i~-- 88 (336)
T 1ypf_A 13 VFDYEDIQLIPAKCIVNSRSECDTTVTLG-KHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQP-EKRISFIR-- 88 (336)
T ss_dssp CCCGGGEEECCCCCCCSSGGGCBCCEEET-TEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSG-GGHHHHHH--
T ss_pred cCCcceEEEecccCCCCCcccCcceEEEC-CEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCC-HHHHHHHH--
Confidence 79999999999996 44557899999998 599999999999999999999988999999987664321 11011111
Q ss_pred hccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecC
Q 010640 102 KSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPA 181 (505)
Q Consensus 102 ~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~ 181 (505)
T Consensus 89 -------------------------------------------------------------------------------- 88 (336)
T 1ypf_A 89 -------------------------------------------------------------------------------- 88 (336)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcC-
Q 010640 182 NYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG- 260 (505)
Q Consensus 182 ~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaG- 260 (505)
.+.+.+. .++++++..++..+.++.+.+.|
T Consensus 89 ---------~~~~~g~----------------------------------------~v~v~~g~~~~~~~~a~~~~~~g~ 119 (336)
T 1ypf_A 89 ---------DMQSRGL----------------------------------------IASISVGVKEDEYEFVQQLAAEHL 119 (336)
T ss_dssp ---------HHHHTTC----------------------------------------CCEEEECCSHHHHHHHHHHHHTTC
T ss_pred ---------HHHhcCC----------------------------------------eEEEeCCCCHHHHHHHHHHHhcCC
Confidence 1111110 11122333334556788888988
Q ss_pred -ccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcC--hH
Q 010640 261 -VNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRG--QA 337 (505)
Q Consensus 261 -ad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p--~~ 337 (505)
++++.++.++|++...++.++++++.++..+++.|++.+.++|+.+.++|+|+|++++++|+.+.++...+++.| ++
T Consensus 120 ~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~ 199 (336)
T 1ypf_A 120 TPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQL 199 (336)
T ss_dssp CCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHH
Confidence 999999887787778899999999998667888788999999999999999999999888877766667788888 88
Q ss_pred HHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccc
Q 010640 338 TAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGS 417 (505)
Q Consensus 338 ~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~ 417 (505)
.++.++++. .++|||++|||+++.|++|||++||++|++|++|+.|.||+++..+++|++||.||||++..++.
T Consensus 200 ~~l~~v~~~---~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g--- 273 (336)
T 1ypf_A 200 AALRWCAKA---ASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKG--- 273 (336)
T ss_dssp HHHHHHHHT---CSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------
T ss_pred HHHHHHHHH---cCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhcc---
Confidence 888777654 47999999999999999999999999999999999999999999999999999999999876531
Q ss_pred cccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCc
Q 010640 418 DQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGG 493 (505)
Q Consensus 418 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~ 493 (505)
..++++|++..+|++|++.++++.|.++||++|.++|+++++||++. .|++++.+++.|+.
T Consensus 274 ---------~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~------~~~~~~~~~~~~~~ 334 (336)
T 1ypf_A 274 ---------EKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRTV------DYVVVKNSIFNGDK 334 (336)
T ss_dssp ------------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGC------CEEECSCCC-----
T ss_pred ---------CccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCcC------CEEEEccccccCCC
Confidence 12358999999999999999999999999999999999999999764 89999999998865
No 17
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.98 E-value=4e-31 Score=273.88 Aligned_cols=322 Identities=22% Similarity=0.307 Sum_probs=225.2
Q ss_pred CCcccceeecCCCCCCCCCCeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcCCC------CHHHHHH
Q 010640 23 SYTYDDVIFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHSNC------TAADQAR 96 (505)
Q Consensus 23 ~~~~~d~~l~p~~~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~~~------~~~~~~~ 96 (505)
.++|||+.|+|+++.+.++++++++++ .++.+..|++.|||++++.+++++++++.|++|+++.++ .++...+
T Consensus 35 ~~~fd~v~l~p~~~~~~~~~vdlst~l-~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~e 113 (393)
T 2qr6_A 35 TYSLDDISVVSSRRTRSSKDVDTTWHI-DAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIA 113 (393)
T ss_dssp CCCGGGEEECCCSCCCCGGGCBCCEEE-TTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHH
T ss_pred CCChhhEEEccCCCCCChhHCCceeEE-cccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHH
Confidence 689999999998888888999999999 589999999999999999999999999999999998754 3333333
Q ss_pred HHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCc
Q 010640 97 LVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSN 176 (505)
Q Consensus 97 ~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~ 176 (505)
++.++....+ .| .. ...+.+ .++.+
T Consensus 114 eia~~~~~~d----~~--~g------~~~~~q---------------------------------------~~~~~---- 138 (393)
T 2qr6_A 114 KVIAAYEEGD----QA--AA------TRTLQE---------------------------------------LHAAP---- 138 (393)
T ss_dssp HHHHHHHHHH----HH--HH------HHHHHH---------------------------------------HHHSC----
T ss_pred HHHHHHHhcC----CC--cc------chhhhh---------------------------------------ccccc----
Confidence 3332211000 00 00 000000 00000
Q ss_pred eEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHH
Q 010640 177 VSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHL 256 (505)
Q Consensus 177 ~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~l 256 (505)
.......+.++...+.+. .+.+.+. .....+.++.+
T Consensus 139 ---~d~~~~~~~i~~~~~~g~----------------------------------------~v~~~v~-~~~~~e~a~~~ 174 (393)
T 2qr6_A 139 ---LDTELLSERIAQVRDSGE----------------------------------------IVAVRVS-PQNVREIAPIV 174 (393)
T ss_dssp ---CCHHHHHHHHHHHHHTTS----------------------------------------CCEEEEC-TTTHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhhcCC----------------------------------------eEEEEeC-CccHHHHHHHH
Confidence 000011122223332221 1112222 22356677777
Q ss_pred HHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccc
Q 010640 257 VKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCA 331 (505)
Q Consensus 257 ieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g 331 (505)
.+.|+|++.++... ..+...+..+.++++.+ ++||++|++.+.++++.+.++|+|+|+++.|+ +.++...+
T Consensus 175 ~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg---~~~~~~~~ 250 (393)
T 2qr6_A 175 IKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-DVPVIAGGVNDYTTALHMMRTGAVGIIVGGGE---NTNSLALG 250 (393)
T ss_dssp HHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-SSCEEEECCCSHHHHHHHHTTTCSEEEESCCS---CCHHHHTS
T ss_pred HHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-CCCEEECCcCCHHHHHHHHHcCCCEEEECCCc---ccccccCC
Confidence 88899999887532 12222455678888887 89999999999999999999999999997543 44567788
Q ss_pred cCcChHHHHHHHHHHH----hhcC---CcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeee
Q 010640 332 VGRGQATAVYKVSSIA----AQSG---VPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKY 404 (505)
Q Consensus 332 ~g~p~~~~l~~v~~~~----~~~~---ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~ 404 (505)
||.|++.++.++.+.+ .+.+ +|||++|||+++.|++|||++||++|++|++|+.+.||+++.. +
T Consensus 251 ~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~~---------~ 321 (393)
T 2qr6_A 251 MEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGY---------F 321 (393)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTTE---------E
T ss_pred CCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCceE---------E
Confidence 9999999999988763 2233 9999999999999999999999999999999999999999864 3
Q ss_pred cccCcHHHHhccccccccccccccccccceeeeecc----CCchhhHH----------HHHHHHHHHHhhccCCCCHHHH
Q 010640 405 RGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVAD----KGSVLKFI----------PYTMQAVKQGFQDLGASSLQSA 470 (505)
Q Consensus 405 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~----------~~l~~~l~~~m~~~G~~~~~~l 470 (505)
|||++... .+++|++++.+. .+.+.+++ .+|.++||++|+++|+++++||
T Consensus 322 ~g~~~~~~----------------~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el 385 (393)
T 2qr6_A 322 WPAVAAHP----------------RFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSF 385 (393)
T ss_dssp CCGGGGCS----------------SSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHH
T ss_pred EecccCcc----------------cCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 68876421 245666555432 33344444 5889999999999999999999
Q ss_pred HHh
Q 010640 471 HDL 473 (505)
Q Consensus 471 ~~~ 473 (505)
++.
T Consensus 386 ~~~ 388 (393)
T 2qr6_A 386 QKV 388 (393)
T ss_dssp TTC
T ss_pred hhc
Confidence 874
No 18
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.90 E-value=4.2e-23 Score=209.29 Aligned_cols=170 Identities=18% Similarity=0.237 Sum_probs=131.4
Q ss_pred HHHHHHHcCccEEEEeCC--------CCCc--hhHHHHHHHHHHhCCCceEEEccc---CCHHHHHHHHHcCCCEEEEcc
Q 010640 252 RLEHLVKAGVNVVVLDSS--------QGNS--SFQIEMIKYAKKTYPELDVIGGNV---VTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 252 ~~~~lieaGad~I~i~~~--------~g~~--~~~~~~i~~l~~~~~~~~Vi~g~V---~t~e~a~~l~~aGad~I~v~~ 318 (505)
..+.+...++|++.++.. .|+. ..+++.++++++.+ ++||++|++ .+.++|+.+.++|+|+|+|++
T Consensus 160 ~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g 238 (365)
T 3sr7_A 160 GLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL-QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISG 238 (365)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeC
Confidence 333344568888877653 3433 35778999999987 899999988 799999999999999999987
Q ss_pred CCccee----ec-----ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCC
Q 010640 319 GSGSIC----TT-----QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEA 389 (505)
Q Consensus 319 g~g~~~----~~-----~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es 389 (505)
++|+.. .. ..+.+||.|++.++.++.... .++|||++|||+++.|++|||++||++|++|++|+.+..+
T Consensus 239 ~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~--~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~ 316 (365)
T 3sr7_A 239 RGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLM--DKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQ 316 (365)
T ss_dssp BC--------------CGGGTTCSCBHHHHHHHHGGGT--TTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHH
T ss_pred CCCcccchhhccccccccccccccccHHHHHHHHHHhc--CCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh
Confidence 765432 11 234589999999998764322 2699999999999999999999999999999998632100
Q ss_pred CccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHH
Q 010640 390 PGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQS 469 (505)
Q Consensus 390 ~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~ 469 (505)
.|. ..+.+.++.|..+|+..|.++|++++.|
T Consensus 317 ------------------------------------------~G~-------~~v~~~l~~l~~eL~~~m~~~G~~si~e 347 (365)
T 3sr7_A 317 ------------------------------------------HSV-------HEVIAIVNGWKEDLRLIMCALNCQTIAE 347 (365)
T ss_dssp ------------------------------------------SCH-------HHHHHHHHHHHHHHHHHHHHTTCSSTGG
T ss_pred ------------------------------------------cCh-------HHHHHHHHHHHHHHHHHHHHhCCcCHHH
Confidence 111 1477899999999999999999999999
Q ss_pred HHHh
Q 010640 470 AHDL 473 (505)
Q Consensus 470 l~~~ 473 (505)
|++.
T Consensus 348 L~~~ 351 (365)
T 3sr7_A 348 LRNV 351 (365)
T ss_dssp GGGC
T ss_pred hccC
Confidence 9875
No 19
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.89 E-value=7e-22 Score=201.09 Aligned_cols=145 Identities=18% Similarity=0.253 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHhCCCceEEEccc---CCHHHHHHHHHcCCCEEEEccCCcceee------------------cccccccC
Q 010640 275 FQIEMIKYAKKTYPELDVIGGNV---VTMYQAQNLIEAGVDGLRVGMGSGSICT------------------TQEVCAVG 333 (505)
Q Consensus 275 ~~~~~i~~l~~~~~~~~Vi~g~V---~t~e~a~~l~~aGad~I~v~~g~g~~~~------------------~~~~~g~g 333 (505)
.+++.++++++.+ ++||++|.+ .++++|+.+.++|+|+|+|++++|+ ++ ...+.+||
T Consensus 174 ~~~~~i~~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt-~~~~iE~~R~~~~~~~~~~~~~~~~~~g 251 (368)
T 3vkj_A 174 YALEKLRDISKEL-SVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGT-NWIAIEMIRDIRRGNWKAESAKNFLDWG 251 (368)
T ss_dssp HHHHHHHHHHTTC-SSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSB-CHHHHHHHHHHHTTCTHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCC-cccchhhhhcccccccchhhcccccccc
Confidence 4789999999987 899999877 6999999999999999999977663 11 12357899
Q ss_pred cChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHH
Q 010640 334 RGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAM 413 (505)
Q Consensus 334 ~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~ 413 (505)
.|+..++.++++... ++|||++|||+++.|++|||++||++|++|++|+.+. .
T Consensus 252 ~pt~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~-------------------------~ 304 (368)
T 3vkj_A 252 VPTAASIMEVRYSVP--DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSA-------------------------I 304 (368)
T ss_dssp CBHHHHHHHHHHHST--TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHH-------------------------H
T ss_pred ccHHHHHHHHHHHcC--CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHH-------------------------h
Confidence 999999998887653 4999999999999999999999999999999986311 0
Q ss_pred hccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 414 TKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
.|. ..+.+.++.|..+|+..|.++|++++.||++.
T Consensus 305 ------------------~G~-------~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~ 339 (368)
T 3vkj_A 305 ------------------EGK-------ESLEQFFRKIIFELKAAMMLTGSKDVDALKKT 339 (368)
T ss_dssp ------------------HCH-------HHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTC
T ss_pred ------------------cCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHHHhccC
Confidence 111 14778999999999999999999999999864
No 20
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.87 E-value=2e-20 Score=191.02 Aligned_cols=143 Identities=19% Similarity=0.254 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCc
Q 010640 274 SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVP 353 (505)
Q Consensus 274 ~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ip 353 (505)
...++.++++++.+ ++||++|++.+.++|+.+.++|+|+|.|++++|. . ..++.+++.++.++++.... ++|
T Consensus 215 ~~~~~~i~~lr~~~-~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr-----~-~~~g~~~~~~l~~v~~~v~~-~ip 286 (368)
T 2nli_A 215 KISPRDIEEIAGHS-GLPVFVKGIQHPEDADMAIKRGASGIWVSNHGAR-----Q-LYEAPGSFDTLPAIAERVNK-RVP 286 (368)
T ss_dssp BCCHHHHHHHHHHS-SSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGT-----S-CSSCCCHHHHHHHHHHHHTT-SSC
T ss_pred hhhHHHHHHHHHHc-CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcC-----C-CCCCCChHHHHHHHHHHhCC-CCe
Confidence 34567799999987 8999999999999999999999999999977652 2 34678999999998876542 699
Q ss_pred EEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccc
Q 010640 354 VIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQG 433 (505)
Q Consensus 354 vIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g 433 (505)
||++|||+++.|++|+|++||++|++|++|+. +++. .|
T Consensus 287 Via~GGI~~g~D~~kalalGAd~V~iGr~~l~--------------------~~~~----------------------~G 324 (368)
T 2nli_A 287 IVFDSGVRRGEHVAKALASGADVVALGRPVLF--------------------GLAL----------------------GG 324 (368)
T ss_dssp EEECSSCCSHHHHHHHHHTTCSEEEECHHHHH--------------------HHHH----------------------HH
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEECHHHHH--------------------HHHh----------------------cC
Confidence 99999999999999999999999999999863 1110 11
Q ss_pred eeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 434 VVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
.+ ++.+.++.|.++|+..|.++|++++.+|++.
T Consensus 325 ~~-------gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 357 (368)
T 2nli_A 325 WQ-------GAYSVLDYFQKDLTRVMQLTGSQNVEDLKGL 357 (368)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHTCSSHHHHHTC
T ss_pred hH-------HHHHHHHHHHHHHHHHHHHhCCcCHHHhccc
Confidence 11 4779999999999999999999999999986
No 21
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.84 E-value=7.1e-20 Score=183.95 Aligned_cols=144 Identities=20% Similarity=0.274 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCc
Q 010640 274 SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVP 353 (505)
Q Consensus 274 ~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ip 353 (505)
...++.++++++.+ ++||++|.+.+.++|+.+.++|+|+|++++++|.. .. .+.+++..+.++.+... .++|
T Consensus 203 ~~~w~~i~~lr~~~-~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~-----~d-~~~~~~~~L~~i~~av~-~~ip 274 (352)
T 3sgz_A 203 SFCWNDLSLLQSIT-RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQ-----LD-EVSASIDALREVVAAVK-GKIE 274 (352)
T ss_dssp TCCHHHHHHHHHHC-CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTS-----SC-SSCCHHHHHHHHHHHHT-TSSE
T ss_pred CCCHHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCc-----cC-CCccHHHHHHHHHHHhC-CCCe
Confidence 34578899999987 89999999999999999999999999999876632 22 35688899988877654 2699
Q ss_pred EEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccc
Q 010640 354 VIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQG 433 (505)
Q Consensus 354 vIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g 433 (505)
||++|||+++.|++|||++||++|++|++|+. +++. .|
T Consensus 275 Via~GGI~~g~Dv~kaLalGA~aV~iGr~~l~--------------------~l~~----------------------~G 312 (352)
T 3sgz_A 275 VYMDGGVRTGTDVLKALALGARCIFLGRPILW--------------------GLAC----------------------KG 312 (352)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEESHHHHH--------------------HHHH----------------------HH
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEECHHHHH--------------------HHHh----------------------cC
Confidence 99999999999999999999999999999862 1110 11
Q ss_pred eeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhh
Q 010640 434 VVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLL 474 (505)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~ 474 (505)
. .++.+.++.|..+|+..|.++|++++.||++..
T Consensus 313 ~-------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~ 346 (352)
T 3sgz_A 313 E-------DGVKEVLDILTAELHRCMTLSGCQSVAEISPDL 346 (352)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGG
T ss_pred c-------HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhc
Confidence 1 147799999999999999999999999998653
No 22
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.83 E-value=2.8e-19 Score=183.52 Aligned_cols=158 Identities=18% Similarity=0.276 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
.++.++++++.+ ++||++|++.+.++++.+.++|+|+|++++++|.. .+++.|++..+.++++.. ++|||
T Consensus 213 ~~~~i~~i~~~~-~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~------~d~~~~~~~~l~~v~~~~---~~pVi 282 (380)
T 1p4c_A 213 NWEALRWLRDLW-PHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQ------LDCAISPMEVLAQSVAKT---GKPVL 282 (380)
T ss_dssp CHHHHHHHHHHC-CSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTS------CTTCCCGGGTHHHHHHHH---CSCEE
T ss_pred cHHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCc------CCCCcCHHHHHHHHHHHc---CCeEE
Confidence 468899999988 89999999999999999999999999998765531 245678888888776654 46999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccccccccccccccee
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVV 435 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (505)
++|||+++.|+.|++++||++|++|++|+. |++ + .|.
T Consensus 283 a~GGI~~~~dv~kal~~GAdaV~iGr~~l~--------------------~~~---~-------------------~g~- 319 (380)
T 1p4c_A 283 IDSGFRRGSDIVKALALGAEAVLLGRATLY--------------------GLA---A-------------------RGE- 319 (380)
T ss_dssp ECSSCCSHHHHHHHHHTTCSCEEESHHHHH--------------------HHH---H-------------------HHH-
T ss_pred EECCCCCHHHHHHHHHhCCcHhhehHHHHH--------------------HHH---h-------------------cCH-
Confidence 999999999999999999999999999852 110 0 111
Q ss_pred eeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhhcCceeEEEecccccccCccCcceecc
Q 010640 436 GAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSRTLRLEVRTGAAQVEGGVHGLVSYE 501 (505)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 501 (505)
.++.+.++.|.++|+..|.++|++++.||++.. +. .++..|+++||+....
T Consensus 320 ------~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~-------l~--~~g~~~~~~~d~~~~~ 370 (380)
T 1p4c_A 320 ------TGVDEVLTLLKADIDRTLAQIGCPDITSLSPDY-------LQ--NEGVTNTAPVDHLIGK 370 (380)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGG-------EE--EC--------------
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCe-------EE--ecccccccCccccccc
Confidence 147899999999999999999999999999863 22 2567799999987654
No 23
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.83 E-value=2.9e-19 Score=181.98 Aligned_cols=168 Identities=21% Similarity=0.254 Sum_probs=125.7
Q ss_pred HHHHHcCccEEEEeCCCC--------Cc--hhHHHHHHHHHHhCCCceEEEccc---CCHHHHHHHHHcCCCEEEEccCC
Q 010640 254 EHLVKAGVNVVVLDSSQG--------NS--SFQIEMIKYAKKTYPELDVIGGNV---VTMYQAQNLIEAGVDGLRVGMGS 320 (505)
Q Consensus 254 ~~lieaGad~I~i~~~~g--------~~--~~~~~~i~~l~~~~~~~~Vi~g~V---~t~e~a~~l~~aGad~I~v~~g~ 320 (505)
+.+.+.|+|++.++.++. +. ..+++.++++++.+ ++||++|.+ .+.+.++.+.++|+|+|.+++++
T Consensus 134 ~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~-~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~g 212 (349)
T 1p0k_A 134 EAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV-SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYG 212 (349)
T ss_dssp HHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC-SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC--
T ss_pred HHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCC
Confidence 334456888888876532 11 13678899999887 799999754 78999999999999999998765
Q ss_pred cce----eeccc------ccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCC
Q 010640 321 GSI----CTTQE------VCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAP 390 (505)
Q Consensus 321 g~~----~~~~~------~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~ 390 (505)
|+. ...+. ...+|.++...+.++++.. .++|||++|||+++.|+.+++++|||+|++|++|+...++
T Consensus 213 gt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~--~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~- 289 (349)
T 1p0k_A 213 GTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF--PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTD- 289 (349)
T ss_dssp -------------CCGGGGTTCSCCHHHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH-
T ss_pred CcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc--CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhh-
Confidence 531 11122 2467788888888776643 2699999999999999999999999999999998632110
Q ss_pred ccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHH
Q 010640 391 GAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSA 470 (505)
Q Consensus 391 ~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l 470 (505)
.|.+ .+.+.++.|..+|+..|.++|++++.||
T Consensus 290 -----------------------------------------~g~~-------~~~~~~~~~~~~l~~~m~~~G~~~i~el 321 (349)
T 1p0k_A 290 -----------------------------------------SGEE-------GLLEEIQLILEELKLIMTVLGARTIADL 321 (349)
T ss_dssp -----------------------------------------HHHH-------HHHHHHHHHHHHHHHHHHHHTCCBHHHH
T ss_pred -----------------------------------------cCHH-------HHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 1111 3678899999999999999999999999
Q ss_pred HHh
Q 010640 471 HDL 473 (505)
Q Consensus 471 ~~~ 473 (505)
++.
T Consensus 322 ~~~ 324 (349)
T 1p0k_A 322 QKA 324 (349)
T ss_dssp TTC
T ss_pred hhC
Confidence 875
No 24
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.82 E-value=2e-19 Score=184.83 Aligned_cols=144 Identities=19% Similarity=0.300 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcE
Q 010640 275 FQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPV 354 (505)
Q Consensus 275 ~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipv 354 (505)
..++.++++++.+ ++||++|.+.+.++|+.+.++|+|+|++++++|. . ..++.|++.++.++++... .++||
T Consensus 239 ~~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr-----~-~~~g~~~~~~l~~v~~av~-~~ipV 310 (392)
T 2nzl_A 239 ISWEDIKWLRRLT-SLPIVAKGILRGDDAREAVKHGLNGILVSNHGAR-----Q-LDGVPATIDVLPEIVEAVE-GKVEV 310 (392)
T ss_dssp CCHHHHHHHC--C-CSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGT-----S-STTCCCHHHHHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHHHhh-CCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCC-----c-CCCCcChHHHHHHHHHHcC-CCCEE
Confidence 3467789999887 7999999999999999999999999999876652 1 3467899999999887654 25999
Q ss_pred EecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccce
Q 010640 355 IADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGV 434 (505)
Q Consensus 355 Ia~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (505)
|++|||+++.|++|||++||++|++|++|+. +++. .|.
T Consensus 311 ia~GGI~~g~Dv~kalalGAd~V~iGr~~l~--------------------~~~~----------------------~g~ 348 (392)
T 2nzl_A 311 FLDGGVRKGTDVLKALALGAKAVFVGRPIVW--------------------GLAF----------------------QGE 348 (392)
T ss_dssp EECSSCCSHHHHHHHHHTTCSEEEECHHHHH--------------------HHHH----------------------HHH
T ss_pred EEECCCCCHHHHHHHHHhCCCeeEECHHHHH--------------------HHHh----------------------cCh
Confidence 9999999999999999999999999999862 1110 011
Q ss_pred eeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhhh
Q 010640 435 VGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLR 475 (505)
Q Consensus 435 ~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~~ 475 (505)
.++.+.++.|.++|+..|.++|++++.||++..+
T Consensus 349 -------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l 382 (392)
T 2nzl_A 349 -------KGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 382 (392)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGB
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhh
Confidence 1477999999999999999999999999988753
No 25
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.81 E-value=1.5e-18 Score=183.92 Aligned_cols=143 Identities=23% Similarity=0.282 Sum_probs=119.1
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhh----cC
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ----SG 351 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~----~~ 351 (505)
.++.++++++.+ ++||++|++.+.++|+.+.++|+|+|+|++++|. .. ..+.+++..+.++.+.+.. .+
T Consensus 331 ~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~-----~~-d~~~~~~~~l~~v~~~v~~~~~~~~ 403 (511)
T 1kbi_A 331 TWKDIEELKKKT-KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGR-----QL-DFSRAPIEVLAETMPILEQRNLKDK 403 (511)
T ss_dssp CHHHHHHHHHHC-SSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTT-----SS-TTCCCHHHHHHHHHHHHHTTTCBTT
T ss_pred HHHHHHHHHHHh-CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCc-----cC-CCCCchHHHHHHHHHHHHhhccCCC
Confidence 367799999987 8999999999999999999999999999987664 12 2356788888888887642 26
Q ss_pred CcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccc
Q 010640 352 VPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIA 431 (505)
Q Consensus 352 ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~ 431 (505)
+|||++|||+++.|++|||++||++|++|++|+. +++.
T Consensus 404 ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~--------------------~~~~---------------------- 441 (511)
T 1kbi_A 404 LEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLY--------------------ANSC---------------------- 441 (511)
T ss_dssp BEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH--------------------HHHH----------------------
T ss_pred cEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH--------------------HHHh----------------------
Confidence 9999999999999999999999999999999863 1110
Q ss_pred cceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhh
Q 010640 432 QGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLL 474 (505)
Q Consensus 432 ~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~ 474 (505)
.|. .++.+.++.|..+|+..|.++|++++.+|++.+
T Consensus 442 ~G~-------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~ 477 (511)
T 1kbi_A 442 YGR-------NGVEKAIEILRDEIEMSMRLLGVTSIAELKPDL 477 (511)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGG
T ss_pred cCh-------HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHH
Confidence 011 147789999999999999999999999999875
No 26
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.81 E-value=5.4e-19 Score=178.67 Aligned_cols=145 Identities=20% Similarity=0.272 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHhCCCceEEEccc---CCHHHHHHHHHcCCCEEEEccCCcce----eeccc--------ccccCcChHHH
Q 010640 275 FQIEMIKYAKKTYPELDVIGGNV---VTMYQAQNLIEAGVDGLRVGMGSGSI----CTTQE--------VCAVGRGQATA 339 (505)
Q Consensus 275 ~~~~~i~~l~~~~~~~~Vi~g~V---~t~e~a~~l~~aGad~I~v~~g~g~~----~~~~~--------~~g~g~p~~~~ 339 (505)
.+++.++++++ + ++||++|.+ .+.++++.+.++|+|+|++++++|+. ...+. +..+|.|+..+
T Consensus 169 ~~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 246 (332)
T 1vcf_A 169 GLVERLAELLP-L-PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARA 246 (332)
T ss_dssp THHHHHHHHCS-C-SSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHH
T ss_pred HHHHHHHHHHc-C-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHH
Confidence 36788999999 7 899999988 79999999999999999998766531 00021 14578899988
Q ss_pred HHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccc
Q 010640 340 VYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQ 419 (505)
Q Consensus 340 l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~ 419 (505)
+.++++... ++|||++|||+++.|++|+|++|||+|++|++|+.+. +
T Consensus 247 l~~v~~~~~--~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~------------------------------ 293 (332)
T 1vcf_A 247 ILEVREVLP--HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-L------------------------------ 293 (332)
T ss_dssp HHHHHHHCS--SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-T------------------------------
T ss_pred HHHHHHhcC--CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-h------------------------------
Confidence 888876542 5999999999999999999999999999999997321 0
Q ss_pred cccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 420 RYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 420 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
.|.+ ++.++++.|..+|+..|.++|++++.||++.
T Consensus 294 ------------~G~~-------gv~~~~~~l~~el~~~m~~~G~~~i~el~~~ 328 (332)
T 1vcf_A 294 ------------EGAE-------RVAAWIGDYLEELRTALFAIGARNPKEARGR 328 (332)
T ss_dssp ------------TCHH-------HHHHHHHHHHHHHHHHHHHHTCSSGGGGTTC
T ss_pred ------------ccHH-------HHHHHHHHHHHHHHHHHHHhCCCCHHHHhhh
Confidence 1111 4779999999999999999999999999875
No 27
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.80 E-value=1.7e-18 Score=177.25 Aligned_cols=142 Identities=20% Similarity=0.285 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
.++.++++++.+ ++|+++|.+.+.++++.+.++|+|+|.+++++|. .. .++.+++..+.++.+.... ++|||
T Consensus 213 ~~~~i~~l~~~~-~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr-----~~-~~~~~~~~~l~~v~~~~~~-~ipvi 284 (370)
T 1gox_A 213 SWKDVAWLQTIT-SLPILVKGVITAEDARLAVQHGAAGIIVSNHGAR-----QL-DYVPATIMALEEVVKAAQG-RIPVF 284 (370)
T ss_dssp CHHHHHHHHHHC-CSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGT-----SS-TTCCCHHHHHHHHHHHTTT-SSCEE
T ss_pred hHHHHHHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCc-----cC-CCcccHHHHHHHHHHHhCC-CCEEE
Confidence 456788999987 8999999999999999999999999999876652 22 3457888888888776432 59999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccccccccccccccee
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVV 435 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (505)
++|||+++.|+.|++++||++|++|++|+. +++. .|.+
T Consensus 285 a~GGI~~~~D~~k~l~~GAdaV~iGr~~l~--------------------~~~~----------------------~G~~ 322 (370)
T 1gox_A 285 LDGGVRRGTDVFKALALGAAGVFIGRPVVF--------------------SLAA----------------------EGEA 322 (370)
T ss_dssp EESSCCSHHHHHHHHHHTCSEEEECHHHHH--------------------HHHH----------------------HHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEeecHHHHH--------------------HHhh----------------------ccHH
Confidence 999999999999999999999999999852 2110 1111
Q ss_pred eeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHhh
Q 010640 436 GAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLL 474 (505)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~~ 474 (505)
++.+.++.|.++|+..|.++|++++.||++..
T Consensus 323 -------gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 354 (370)
T 1gox_A 323 -------GVKKVLQMMRDEFELTMALSGCRSLKEISRSH 354 (370)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGG
T ss_pred -------HHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 47799999999999999999999999999874
No 28
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.75 E-value=5e-17 Score=163.67 Aligned_cols=209 Identities=24% Similarity=0.321 Sum_probs=154.9
Q ss_pred CeeeeeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEc-CCCCHHHHHHHHHhhhccCCccccCCCeeEeCCC
Q 010640 42 AVSLSTRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVH-SNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPD 120 (505)
Q Consensus 42 ~~~~~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~-~~~~~~~~~~~v~~v~~~~~~~~~~p~~~~v~~~ 120 (505)
.+.+.+++++.+.+++|+|++||.+++..+++.++++.|++|++. ...+++...+.++++++..+ .| +.+
T Consensus 12 ~~~~~t~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~----~p--~gV--- 82 (326)
T 3bo9_A 12 HMTVRTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTD----KP--FGV--- 82 (326)
T ss_dssp CCCCCCHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCS----SC--EEE---
T ss_pred ceeecchhHHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcC----CC--EEE---
Confidence 456788999999999999999999999999999999999999884 44567666666665544321 12 000
Q ss_pred CCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCee
Q 010640 121 GCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFV 200 (505)
Q Consensus 121 ~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~l 200 (505)
T Consensus 83 -------------------------------------------------------------------------------- 82 (326)
T 3bo9_A 83 -------------------------------------------------------------------------------- 82 (326)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHH
Q 010640 201 VLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMI 280 (505)
Q Consensus 201 pVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i 280 (505)
+... ..+...+.++.+.+.|++++.++.. .+ .+.+
T Consensus 83 ---------------------------------------nl~~-~~~~~~~~~~~~~~~g~d~V~l~~g--~p---~~~~ 117 (326)
T 3bo9_A 83 ---------------------------------------NIIL-VSPWADDLVKVCIEEKVPVVTFGAG--NP---TKYI 117 (326)
T ss_dssp ---------------------------------------EEET-TSTTHHHHHHHHHHTTCSEEEEESS--CC---HHHH
T ss_pred ---------------------------------------EEec-cCCCHHHHHHHHHHCCCCEEEECCC--Cc---HHHH
Confidence 0000 0112456778888999999988543 33 3456
Q ss_pred HHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc-cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCC
Q 010640 281 KYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG-MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGG 359 (505)
Q Consensus 281 ~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~-~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GG 359 (505)
+++++. +++++. .+.+.+.++.+.++|+|+|.+. ...|+... ..+++..+.++.+ ..++|||++||
T Consensus 118 ~~l~~~--g~~v~~-~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G-------~~~~~~ll~~i~~---~~~iPviaaGG 184 (326)
T 3bo9_A 118 RELKEN--GTKVIP-VVASDSLARMVERAGADAVIAEGMESGGHIG-------EVTTFVLVNKVSR---SVNIPVIAAGG 184 (326)
T ss_dssp HHHHHT--TCEEEE-EESSHHHHHHHHHTTCSCEEEECTTSSEECC-------SSCHHHHHHHHHH---HCSSCEEEESS
T ss_pred HHHHHc--CCcEEE-EcCCHHHHHHHHHcCCCEEEEECCCCCccCC-------CccHHHHHHHHHH---HcCCCEEEECC
Confidence 666665 678776 6889999999999999999984 22232211 1355666655544 35799999999
Q ss_pred CCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeec
Q 010640 360 ISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQN 397 (505)
Q Consensus 360 I~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~ 397 (505)
|.++.|+.+++++||++|++||+|+.+.||+++..+++
T Consensus 185 I~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~~~~k~ 222 (326)
T 3bo9_A 185 IADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKE 222 (326)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHHTBSSCCSCHHHHH
T ss_pred CCCHHHHHHHHHhCCCEEEechHHHcCccccccHHHHH
Confidence 99999999999999999999999999999998877653
No 29
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.69 E-value=7.4e-16 Score=155.47 Aligned_cols=132 Identities=22% Similarity=0.296 Sum_probs=101.2
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc-cCCcceeecc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG-MGSGSICTTQ 327 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~-~g~g~~~~~~ 327 (505)
..+.++.+.+.|++++.++.. .+ .+.++++++. +++++. .+.+.++++.+.++|+|+|.+. .++|++....
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g--~p---~~~~~~l~~~--gi~vi~-~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~ 156 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGN--DP---GEHIAEFRRH--GVKVIH-KCTAVRHALKAERLGVDAVSIDGFECAGHPGED 156 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEES--CC---HHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSEEEEECTTCSBCCCSS
T ss_pred HHHHHHHHHhcCCCEEEEcCC--Cc---HHHHHHHHHc--CCCEEe-eCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCc
Confidence 557788888999999988653 33 3566777776 788875 6889999999999999999984 3333222111
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceee
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ 396 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~ 396 (505)
..++...+.+++ +..++|||++|||.++.|+.+++++||++|++||+|+.+.||+++..++
T Consensus 157 -----~~~~~~~l~~v~---~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~~k 217 (328)
T 2gjl_A 157 -----DIPGLVLLPAAA---NRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVK 217 (328)
T ss_dssp -----CCCHHHHHHHHH---TTCCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSSSCSCHHHH
T ss_pred -----cccHHHHHHHHH---HhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCccccccHHHH
Confidence 134555554443 3457999999999999999999999999999999999999998876665
No 30
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.68 E-value=6.7e-17 Score=147.18 Aligned_cols=114 Identities=19% Similarity=0.249 Sum_probs=102.0
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-------------------
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS------------------- 160 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~------------------- 160 (505)
.+.++|.+++ +++++++|+.+|+++|.+ ++ +||+|+ +|+++|+||.+|+....
T Consensus 19 ~V~diM~~~v--~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T 4esy_A 19 PIRDILTSPV--VTVREDDTLDAVAKTMLEHQIGCAPVVDQ---NGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAP 93 (170)
T ss_dssp BGGGGCCSCC--CCEETTSBHHHHHHHHHHTTCSEEEEECT---TSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHH
T ss_pred CHHHhcCCCC--cEECCcCcHHHHHHHHHHcCCeEEEEEcC---CccEEEEEEHHHHHHHHhhccccchhhhhhhccchh
Confidence 4667898888 999999999999999998 77 999998 89999999999985211
Q ss_pred --------ccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcC
Q 010640 161 --------DNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGY 223 (505)
Q Consensus 161 --------~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~ 223 (505)
....++.++|++ +++++.+++++.+++++|.+++++++||+|+|+++|+||++||++++..
T Consensus 94 ~~~~~~~~~~~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 94 EVEHLFETGRKLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHHHHHHHTTCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHTTTSCC
T ss_pred hHHhhhccccccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 124578999999 9999999999999999999999999999999999999999999998753
No 31
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.67 E-value=9.5e-17 Score=183.55 Aligned_cols=170 Identities=18% Similarity=0.157 Sum_probs=129.1
Q ss_pred hhHHHHHHHHHHhCCCceEEEcccC---CHHHHHHHHHcCCCEEEEccCCcceeec--ccccccCcChHHHHHHHHHHHh
Q 010640 274 SFQIEMIKYAKKTYPELDVIGGNVV---TMYQAQNLIEAGVDGLRVGMGSGSICTT--QEVCAVGRGQATAVYKVSSIAA 348 (505)
Q Consensus 274 ~~~~~~i~~l~~~~~~~~Vi~g~V~---t~e~a~~l~~aGad~I~v~~g~g~~~~~--~~~~g~g~p~~~~l~~v~~~~~ 348 (505)
....+.++++++.+++.||++|.+. ..+.|+.+.++|+|+|+++++.|+...+ .....||.|+..+|.++.+.+.
T Consensus 978 edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~ 1057 (1479)
T 1ea0_A 978 EDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLT 1057 (1479)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHH
Confidence 3467889999999888999998764 4778999999999999997543332222 2245788999999999998875
Q ss_pred hc----CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccccc
Q 010640 349 QS----GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGD 424 (505)
Q Consensus 349 ~~----~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~ 424 (505)
.. ++|||++|||+++.|++||++|||++|++||+|+.+.+|.-- ..
T Consensus 1058 ~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~------------------------------r~ 1107 (1479)
T 1ea0_A 1058 LNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMV------------------------------RQ 1107 (1479)
T ss_dssp TTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCC------------------------------CC
T ss_pred HcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHH------------------------------hh
Confidence 43 599999999999999999999999999999999876554310 01
Q ss_pred ccccccccceeeeecc--------CCchhhHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 425 KAKLKIAQGVVGAVAD--------KGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 425 ~~~~~~~~g~~~~~~~--------~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
|+++.+|-|+..+.|. ...|.++++.|..+||..|.++|+++++||+.+
T Consensus 1108 Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~ 1164 (1479)
T 1ea0_A 1108 CHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGR 1164 (1479)
T ss_dssp TTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTC
T ss_pred ccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCc
Confidence 1222333333322221 125789999999999999999999999999655
No 32
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.66 E-value=3.3e-15 Score=153.13 Aligned_cols=138 Identities=22% Similarity=0.274 Sum_probs=102.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc-cCCcceeecc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG-MGSGSICTTQ 327 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~-~g~g~~~~~~ 327 (505)
..+.++.+.+.|++++.++.... ..+.++.+++. +++++. .+.+.+.++.+.++|+|+|.+. ...|++..+.
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~----~~~~i~~~~~~--g~~v~~-~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~ 183 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVP----DREVIARLRRA--GTLTLV-TATTPEEARAVEAAGADAVIAQGVEAGGHQGTH 183 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCC----CHHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSEEEEECTTCSEECCCS
T ss_pred HHHHHHHHHhcCCCEEEEeCCCC----cHHHHHHHHHC--CCeEEE-ECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCc
Confidence 56788889999999999865332 24566777775 677766 6889999999999999999994 3223332211
Q ss_pred cc----cccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceee
Q 010640 328 EV----CAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ 396 (505)
Q Consensus 328 ~~----~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~ 396 (505)
.. .+++.++...+.++++ ..++|||++|||.++.++.+++++||++|++|+.|+.+.|++.+..++
T Consensus 184 ~~~~~~~~~~~~~~~~l~~i~~---~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~~~~~~k 253 (369)
T 3bw2_A 184 RDSSEDDGAGIGLLSLLAQVRE---AVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESGAPGPHK 253 (369)
T ss_dssp SCCGGGTTCCCCHHHHHHHHHH---HCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCCCCHHHH
T ss_pred ccccccccccccHHHHHHHHHH---hcCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccCccHHHH
Confidence 10 1111344555555443 357999999999999999999999999999999999999998765544
No 33
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.66 E-value=1.8e-16 Score=189.79 Aligned_cols=222 Identities=14% Similarity=0.068 Sum_probs=152.8
Q ss_pred CCCeeeeeeecCcccccceEEEccch-hhhHHHHHHHHHHcCCeeEE--cCCCCHHHHHHHHHhhhccCCccccCCCeeE
Q 010640 40 IDAVSLSTRLTRNIDLSLPCVASPMD-TVTEDYMAAAMAALGGIGIV--HSNCTAADQARLVVSAKSRRVPIFSSSLDVF 116 (505)
Q Consensus 40 ~~~~~~~~~lt~~~~l~~Pli~a~m~-~vt~~~ma~al~~~Gg~g~i--~~~~~~~~~~~~v~~v~~~~~~~~~~p~~~~ 116 (505)
..++++.++||+.+. ++|||+++|+ ++++.+|++++++.||+|+| +.+++++.+.+.++++++..+. ..| +
T Consensus 567 ~~~~~l~t~~t~~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~--~~p--~- 640 (2060)
T 2uva_G 567 VGQTFVDTKMSRLLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPP--GRG--I- 640 (2060)
T ss_dssp TCCEEEECHHHHHHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCT--TCC--E-
T ss_pred CCceecchhhhhccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhccc--CCC--e-
Confidence 345788999998888 8999999999 78999999999999999999 7788999999999988765410 012 1
Q ss_pred eCCCCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCCCCHHHHHHHHHHCC
Q 010640 117 KAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKND 196 (505)
Q Consensus 117 v~~~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~ 196 (505)
|+ ++|.. .+..
T Consensus 641 --------------------------------gv-----------------N~~~~-------~p~~------------- 651 (2060)
T 2uva_G 641 --------------------------------TV-----------------NLIYV-------NPRA------------- 651 (2060)
T ss_dssp --------------------------------EE-----------------EEETT-------CTTH-------------
T ss_pred --------------------------------Ee-----------------ccccc-------Cccc-------------
Confidence 11 00100 0000
Q ss_pred CCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccE--EEEeCCCCCch
Q 010640 197 VDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNV--VVLDSSQGNSS 274 (505)
Q Consensus 197 i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~--I~i~~~~g~~~ 274 (505)
.....+.++.+++.|+++ +.+ +.|.+.
T Consensus 652 -------------------------------------------------~~~~~~~~~~~~~~gv~i~gv~~--~~G~p~ 680 (2060)
T 2uva_G 652 -------------------------------------------------MGWQIPLLGRLRADGVPIEGLTI--GAGVPS 680 (2060)
T ss_dssp -------------------------------------------------HHHHHHHHHHHHTTTCCEEEEEE--ESSCCC
T ss_pred -------------------------------------------------chhHHHHHHHHHHcCCCcceEee--cCCCCC
Confidence 000235566677778887 544 445432
Q ss_pred hHHHHHHHHHHhCCCceEEEcccCCHHHHHHH----HHcCCCEEE---Ec-cCCcceeecccccccCcChHHHHHHHHHH
Q 010640 275 FQIEMIKYAKKTYPELDVIGGNVVTMYQAQNL----IEAGVDGLR---VG-MGSGSICTTQEVCAVGRGQATAVYKVSSI 346 (505)
Q Consensus 275 ~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l----~~aGad~I~---v~-~g~g~~~~~~~~~g~g~p~~~~l~~v~~~ 346 (505)
..+.++.+++. +++++. .+.+..++..+ .++|+|+|+ +. ..+|++... .+.+.+++..+.++
T Consensus 681 -~e~~~~~l~~~--gi~~i~-~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~---~d~~~~~l~lv~~i--- 750 (2060)
T 2uva_G 681 -IEVANEYIQTL--GIRHIS-FKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSF---EDFHQPILLMYSRI--- 750 (2060)
T ss_dssp -HHHHHHHHHHS--CCSEEE-ECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCS---CCSHHHHHHHHHHH---
T ss_pred -HHHHHHHHHHc--CCeEEE-ecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCc---ccccchHHHHHHHH---
Confidence 12344455554 666653 45555666555 899999998 53 233333321 11223445444444
Q ss_pred HhhcCCcEEecCCCCCHHHHHHHH-----------HhCCCEEEecccccCCCCCCccceeec
Q 010640 347 AAQSGVPVIADGGISNSGHIVKAL-----------VLGASTVMMGSFLAGSTEAPGAYVYQN 397 (505)
Q Consensus 347 ~~~~~ipvIa~GGI~~~~di~kal-----------~lGA~~V~~G~~f~~~~Es~~~~~~~~ 397 (505)
.+..++|||++|||.++.|+++|| ++|||+|+|||+|+.|.||+++..+|+
T Consensus 751 ~~~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~K~ 812 (2060)
T 2uva_G 751 RKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQAKQ 812 (2060)
T ss_dssp HTSTTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHHHH
T ss_pred HHHcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHHHH
Confidence 445679999999999999999999 999999999999999999999988774
No 34
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.65 E-value=2.4e-15 Score=151.90 Aligned_cols=130 Identities=25% Similarity=0.369 Sum_probs=99.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc-cCCcceeecc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG-MGSGSICTTQ 327 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~-~g~g~~~~~~ 327 (505)
..+.++.+.+.|+|++.++. +.+. +.++.+++. ++++++ .+.+.+.++.+.++|+|+|.+. ...|+..
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~--g~p~---~~i~~l~~~--g~~v~~-~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~--- 145 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGA--GNPS---KYMERFHEA--GIIVIP-VVPSVALAKRMEKIGADAVIAEGMEAGGHI--- 145 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECS--SCGG---GTHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSCEEEECTTSSEEC---
T ss_pred HHHHHHHHHHCCCCEEEECC--CChH---HHHHHHHHc--CCeEEE-EeCCHHHHHHHHHcCCCEEEEECCCCCCCC---
Confidence 45677888899999998855 3333 345556664 788876 5789999999999999999994 2222221
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceee
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQ 396 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~ 396 (505)
| ..+++..+.++++ ..++|||++|||.++.++.+++++||++|++||+|+.+.|++++..++
T Consensus 146 ---g-~~~~~~ll~~i~~---~~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~~~~~~k 207 (332)
T 2z6i_A 146 ---G-KLTTMTLVRQVAT---AISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYK 207 (332)
T ss_dssp ---C-SSCHHHHHHHHHH---HCSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCCSCHHHH
T ss_pred ---C-CccHHHHHHHHHH---hcCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccccccHHHH
Confidence 1 1345555555544 457999999999999999999999999999999999999999766555
No 35
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.65 E-value=2.5e-16 Score=180.52 Aligned_cols=170 Identities=20% Similarity=0.182 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHhCCCceEEEcccC---CHHHHHHHHHcCCCEEEEccCCcceeec--ccccccCcChHHHHHHHHHHHh
Q 010640 274 SFQIEMIKYAKKTYPELDVIGGNVV---TMYQAQNLIEAGVDGLRVGMGSGSICTT--QEVCAVGRGQATAVYKVSSIAA 348 (505)
Q Consensus 274 ~~~~~~i~~l~~~~~~~~Vi~g~V~---t~e~a~~l~~aGad~I~v~~g~g~~~~~--~~~~g~g~p~~~~l~~v~~~~~ 348 (505)
....+.++++++..|+.||++|.+. ..+.|+.+.++|+|+|++++++|+...+ .....||.|+..+|.++.+.+.
T Consensus 1013 edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~ 1092 (1520)
T 1ofd_A 1013 EDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLM 1092 (1520)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHH
Confidence 3467889999999888999998664 4778899999999999997554332222 1245688999999999988775
Q ss_pred hc----CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhcccccccccc
Q 010640 349 QS----GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGD 424 (505)
Q Consensus 349 ~~----~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~ 424 (505)
.. ++|||++|||+++.|++||++|||++|++||+|+.+.+|.--. .
T Consensus 1093 ~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r------------------------------~ 1142 (1520)
T 1ofd_A 1093 ENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMAR------------------------------V 1142 (1520)
T ss_dssp HTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCC------------------------------C
T ss_pred hcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHH------------------------------h
Confidence 43 5999999999999999999999999999999998776654111 1
Q ss_pred ccccccccceeeeec--------cCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 425 KAKLKIAQGVVGAVA--------DKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 425 ~~~~~~~~g~~~~~~--------~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
|+++.+|-|+..+.| ....|.++++.|..+||..|.++|+++++||+.+
T Consensus 1143 Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr 1199 (1520)
T 1ofd_A 1143 CHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGR 1199 (1520)
T ss_dssp GGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTC
T ss_pred ccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCc
Confidence 222233333333221 0225889999999999999999999999999633
No 36
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.65 E-value=3.7e-16 Score=147.89 Aligned_cols=160 Identities=9% Similarity=0.050 Sum_probs=103.5
Q ss_pred hccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceE
Q 010640 102 KSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVS 178 (505)
Q Consensus 102 ~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~ 178 (505)
....++|..++ ++++++.|+.+++++|.+ ++ +||+|+ +++++|+||.+|++... .+.++.++|++ ++++
T Consensus 13 ~~~~~~~~~~~--~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~~l~Givt~~dl~~~~-~~~~v~~im~~--~~~~ 84 (213)
T 1vr9_A 13 MKVKKWVTQDF--PMVEESATVRECLHRMRQYQTNECIVKDR---EGHFRGVVNKEDLLDLD-LDSSVFNKVSL--PDFF 84 (213)
T ss_dssp CBGGGGCBSCS--CEEETTCBHHHHHHHHHHTTSSEEEEECT---TSBEEEEEEGGGGTTSC-TTSBSGGGCBC--TTCC
T ss_pred cCHHHhhcCCC--eEECCCCcHHHHHHHHHHCCCCEEEEEcC---CCEEEEEEEHHHHHhhc-CCCcHHHHccC--CCEE
Confidence 34556788888 999999999999999988 66 999997 89999999999997433 25689999998 9999
Q ss_pred ecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHH
Q 010640 179 VPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLV 257 (505)
Q Consensus 179 v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li 257 (505)
+.+++++.+++++|.++++..+||+|+ |+++|+||.+|+++....... ..+...++.+.... ......+.++.+.
T Consensus 85 v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~---~~~~~~~l~~~~~~-~~~~l~~~~~~l~ 160 (213)
T 1vr9_A 85 VHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALA---MDVPGIRFSVLLED-KPGELRKVVDALA 160 (213)
T ss_dssp EETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC-------------------------------
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhc---CCCCcEEEEEEeCC-CCccHHHHHHHHH
Confidence 999999999999999999999999999 999999999999998764433 23333444443111 1122445577778
Q ss_pred HcCccEEEEeCCCCCc
Q 010640 258 KAGVNVVVLDSSQGNS 273 (505)
Q Consensus 258 eaGad~I~i~~~~g~~ 273 (505)
+.+++++.+...+|+.
T Consensus 161 ~~~~~~l~V~~~~~~~ 176 (213)
T 1vr9_A 161 LSNINILSVITTRSGD 176 (213)
T ss_dssp ----------------
T ss_pred HCCCcEEEEEEEecCC
Confidence 8899998887766653
No 37
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.63 E-value=7.6e-16 Score=140.53 Aligned_cols=114 Identities=13% Similarity=0.122 Sum_probs=100.5
Q ss_pred hccCCccc--cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEecccccccc--ccccccccccccC
Q 010640 102 KSRRVPIF--SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENLS--DNKVKIFDYMRDC 173 (505)
Q Consensus 102 ~~~~~~~~--~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~~--~~~~~v~~im~~~ 173 (505)
.+..++|. .++ +++++++|+.+|+++|.+ ++ +||+++ + ++++|+||.+|++... ....++.++| +
T Consensus 42 ~~v~diM~~~~~~--~~v~~~~~v~~a~~~m~~~~~~~~pVvd~---~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~- 114 (172)
T 3lhh_A 42 RTISSLMVPRSDI--VFLDLNLPLDANLRTVMQSPHSRFPVCRN---NVDDMVGIISAKQLLSESIAGERLELVDLV-K- 114 (172)
T ss_dssp -CTTTTSEEGGGC--CCEETTSCHHHHHHHHHTCCCSEEEEESS---STTSEEEEEEHHHHHHHHHTTCCCCGGGGC-B-
T ss_pred CCHHHhCccHHHe--EEEcCCCCHHHHHHHHHhCCCCEEEEEeC---CCCeEEEEEEHHHHHHHHhhcCcccHHHHh-c-
Confidence 35667888 556 899999999999999999 77 999986 6 9999999999997432 2367899999 7
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 174 SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 174 ~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
+++++++++++.+++++|.+++++.+||+|+ |+++|+||++|+++....
T Consensus 115 -~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 115 -NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp -CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred -CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 8999999999999999999999999999999 999999999999998753
No 38
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.60 E-value=1.9e-15 Score=130.93 Aligned_cols=109 Identities=16% Similarity=0.080 Sum_probs=95.4
Q ss_pred Cccc--cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEecccccccc-ccccccccccccCCCceE
Q 010640 106 VPIF--SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENLS-DNKVKIFDYMRDCSSNVS 178 (505)
Q Consensus 106 ~~~~--~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~~ 178 (505)
++|. .++ +++++++++.+|++.|.+ ++ +||+++ + ++++|+||.+|+.... ....++.++|+ ++++
T Consensus 9 diM~~~~~~--~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~~~~~Givt~~dl~~~~~~~~~~v~~~m~---~~~~ 80 (129)
T 3jtf_A 9 DIMVPRSRM--DLLDISQPLPQLLATIIETAHSRFPVYED---DRDNIIGILLAKDLLRYMLEPALDIRSLVR---PAVF 80 (129)
T ss_dssp HHCEEGGGC--CCEETTSCHHHHHHHHHHSCCSEEEEESS---STTCEEEEEEGGGGGGGGTCTTSCGGGGCB---CCCE
T ss_pred HhCccHHHe--EEECCCCCHHHHHHHHHHcCCCEEEEEcC---CCCcEEEEEEHHHHHhHhccCCcCHHHHhC---CCeE
Confidence 4566 345 889999999999999998 77 999986 5 8999999999997432 34678999996 5789
Q ss_pred ecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 179 VPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 179 v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+++++++.+++++|.+++.+.+||+|+ |+++|+||++|+++...
T Consensus 81 v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 81 IPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp EETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred eCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 999999999999999999999999999 99999999999998753
No 39
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.59 E-value=2e-15 Score=132.17 Aligned_cols=109 Identities=16% Similarity=0.091 Sum_probs=95.2
Q ss_pred Cccc--cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEeccccccc----cccccccccccccCCC
Q 010640 106 VPIF--SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENL----SDNKVKIFDYMRDCSS 175 (505)
Q Consensus 106 ~~~~--~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~----~~~~~~v~~im~~~~~ 175 (505)
++|. .++ +++++++|+.+|+++|.+ ++ +||+++ + ++++|+||.+|++.. .....++.++|+ +
T Consensus 7 ~iM~~~~~~--~~v~~~~~v~~a~~~m~~~~~~~~pVvd~---~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~---~ 78 (136)
T 3lfr_A 7 DIMVPRSQM--ISIKATQTPREFLPAVIDAAHSRYPVIGE---SHDDVLGVLLAKDLLPLILKADGDSDDVKKLLR---P 78 (136)
T ss_dssp HHSEEGGGC--CCEETTCCHHHHHHHHHHHCCSEEEEESS---STTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCB---C
T ss_pred hccccHHHE--EEEcCCCCHHHHHHHHHhCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcC---C
Confidence 4565 345 889999999999999999 77 999997 6 899999999999743 234678999996 5
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 176 NVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 176 ~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
++++++++++.+++++|.+++++++||+|+ |+++|+||++|+++.+.
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 79 ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 789999999999999999999999999998 99999999999999764
No 40
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.59 E-value=1.6e-15 Score=134.50 Aligned_cols=112 Identities=18% Similarity=0.200 Sum_probs=99.5
Q ss_pred ccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEecccccccc--ccccccccccccCC
Q 010640 103 SRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENLS--DNKVKIFDYMRDCS 174 (505)
Q Consensus 103 ~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~~--~~~~~v~~im~~~~ 174 (505)
+..++|.. ++ +++++++++.++++.|.+ ++ +||+|+ + ++++|+||.+|+.... ....++.++| +
T Consensus 24 ~v~diM~~~~~~--~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~~~lvGivt~~dl~~~~~~~~~~~v~~~m-~-- 95 (148)
T 3lv9_A 24 KIREIMVPRTDM--VCIYESDSEEKILAILKEEGVTRYPVCRK---NKDDILGFVHIRDLYNQKINENKIELEEIL-R-- 95 (148)
T ss_dssp BGGGTSEETTTC--CCEETTCCHHHHHHHHHHSCCSEEEEESS---STTSEEEEEEHHHHHHHHHHHSCCCGGGTC-B--
T ss_pred CHHHccccHHHe--EEECCCCCHHHHHHHHHHCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHhcCCCccHHHhc-C--
Confidence 45568887 77 899999999999999998 77 999996 6 8999999999997432 2267899999 6
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+++++++++++.++++.|.+++++.+||+|+ |+++|+||++|+++...
T Consensus 96 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 96 DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 8999999999999999999999999999999 99999999999998753
No 41
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.59 E-value=2e-15 Score=130.33 Aligned_cols=108 Identities=14% Similarity=0.164 Sum_probs=94.7
Q ss_pred CccccC--CCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEeccccccc---cccccccccccccCCCc
Q 010640 106 VPIFSS--SLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENL---SDNKVKIFDYMRDCSSN 176 (505)
Q Consensus 106 ~~~~~~--p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~---~~~~~~v~~im~~~~~~ 176 (505)
++|... + +++++++++.++++.|.+ ++ +||+++ + ++++|+||.+|+... .....++.++|+ ++
T Consensus 7 diM~~~~~~--~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~---~~ 78 (127)
T 3nqr_A 7 DIMIPRSQM--ITLKRNQTLDECLDVIIESAHSRFPVISE---DKDHIEGILMAKDLLPFMRSDAEAFSMDKVLR---TA 78 (127)
T ss_dssp HHSEEGGGC--CCEETTCCHHHHHHHHHHHCCSEEEEESS---STTCEEEEEEGGGGGGGGSTTCCCCCHHHHCB---CC
T ss_pred HhcccHHHe--EEEcCCCCHHHHHHHHHhCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHhccCCCCCHHHHcC---CC
Confidence 456543 6 899999999999999998 77 999997 6 899999999999743 234678999996 46
Q ss_pred eEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 177 VSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 177 ~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
.++++++++.+++++|.+++++++||+|+ |+++|+||++|+++..
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 79999999999999999999999999998 9999999999999875
No 42
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.59 E-value=1.5e-15 Score=131.63 Aligned_cols=113 Identities=16% Similarity=0.188 Sum_probs=98.2
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEecccccccc---ccccccccccccCCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENLS---DNKVKIFDYMRDCSS 175 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~~---~~~~~v~~im~~~~~ 175 (505)
+..++|...+..+++++++++.+|++.|.+ ++ +||+|+ + ++++|+||.+|++... ....++.++|+ +
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m~---~ 80 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE---QKDNIIGFVHRLELFKMQQSGSGQKQLGAVMR---P 80 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS---STTCEEEECCHHHHHHHHHTTTTTSBHHHHSE---E
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC---CCCcEEEEEEHHHHHHHHhcCCCcCCHHHHhc---C
Confidence 456678755433689999999999999999 77 999997 6 8999999999997332 23578999995 6
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 176 NVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 176 ~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
++++++++++.++++.|.+++++.+||+|+ |+++|+||++|+++..
T Consensus 81 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 81 IQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp CCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred CcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 789999999999999999999999999998 9999999999999875
No 43
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.59 E-value=1.4e-15 Score=136.71 Aligned_cols=114 Identities=11% Similarity=0.136 Sum_probs=97.6
Q ss_pred hccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc---------ccccccccc
Q 010640 102 KSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS---------DNKVKIFDY 169 (505)
Q Consensus 102 ~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~---------~~~~~v~~i 169 (505)
++.+++|++..+.+++++++|+.+|+++|.+ ++ +||+|+ +++++|+||.+|+.... ....++.++
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~i 91 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM 91 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGT
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CCcEEEEEEecchhhhhhhcccccccccccCHHHh
Confidence 4566778764444899999999999999999 88 999997 89999999999986211 135689999
Q ss_pred cccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 170 MRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 170 m~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
|++ +++++++++++.+++++|.+++ .+||||+ |+++|+||++||+++..
T Consensus 92 m~~--~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 92 TKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp CBC--SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred hcC--CceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHH
Confidence 999 9999999999999999999876 4999999 99999999999999874
No 44
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.56 E-value=2.3e-15 Score=128.54 Aligned_cols=110 Identities=18% Similarity=0.241 Sum_probs=97.9
Q ss_pred CccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc-cccccccccccccCCCceEecC
Q 010640 106 VPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL-SDNKVKIFDYMRDCSSNVSVPA 181 (505)
Q Consensus 106 ~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~-~~~~~~v~~im~~~~~~~~v~~ 181 (505)
++|..++ +++++++++.++++.|.+ ++ +||+|+ +++++|+||.+|+... .....++.++|.+ ++.++++
T Consensus 5 ~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~G~vt~~dl~~~~~~~~~~v~~~~~~--~~~~v~~ 77 (122)
T 3kpb_A 5 DILSKPP--ITAHSNISIMEAAKILIKHNINHLPIVDE---HGKLVGIITSWDIAKALAQNKKTIEEIMTR--NVITAHE 77 (122)
T ss_dssp HHCCSCC--CCEETTSBHHHHHHHHHHHTCSCEEEECT---TSBEEEEECHHHHHHHHHTTCCBGGGTSBS--SCCCEET
T ss_pred HhhCCCC--EEeCCCCcHHHHHHHHHHcCCCeEEEECC---CCCEEEEEEHHHHHHHHHhcccCHHHHhcC--CCeEECC
Confidence 3555667 899999999999999998 76 999997 8999999999999732 2334589999998 9999999
Q ss_pred CCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 182 NYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 182 ~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
++++.++++.|.+++.+.+||+|+ |+++|+||++|+++...
T Consensus 78 ~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 78 DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 999999999999999999999999 99999999999998764
No 45
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.55 E-value=1.4e-14 Score=129.92 Aligned_cols=109 Identities=15% Similarity=0.190 Sum_probs=95.7
Q ss_pred ccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEecccccccc--ccccccccccccCC
Q 010640 103 SRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENLS--DNKVKIFDYMRDCS 174 (505)
Q Consensus 103 ~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~~--~~~~~v~~im~~~~ 174 (505)
+..++|.+ ++ +++++++++.++++.|.+ ++ +||+++ + ++++|+||.+|++... ....++.++|+
T Consensus 39 ~v~diM~~~~~~--~~v~~~~~i~~a~~~m~~~~~~~~pVvd~---~~~~lvGivt~~dl~~~~~~~~~~~v~~im~--- 110 (156)
T 3oi8_A 39 EVRDAMITRSRM--NVLKENDSIERITAYVIDTAHSRFPVIGE---DKDEVLGILHAKDLLKYMFNPEQFHLKSILR--- 110 (156)
T ss_dssp BGGGTCEEGGGC--CCEETTCCHHHHHHHHHHHCCSEEEEESS---STTCEEEEEEGGGGGGGSSCGGGCCHHHHCB---
T ss_pred CHhheeeeHHHe--EEECCCCCHHHHHHHHHHCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHHcCCcccHHHHcC---
Confidence 45578876 56 899999999999999998 77 999997 5 5999999999997432 24678999996
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhh
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVER 219 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~ 219 (505)
+++++++++++.+++++|.+++++.+||+|+ |+++|+||++|+++
T Consensus 111 ~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dile 156 (156)
T 3oi8_A 111 PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIE 156 (156)
T ss_dssp CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHCC
T ss_pred CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhcC
Confidence 5789999999999999999999999999998 99999999999863
No 46
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.55 E-value=2.3e-14 Score=134.76 Aligned_cols=122 Identities=16% Similarity=0.138 Sum_probs=104.8
Q ss_pred HHHHHHHhhhccC-----CccccCCCeeEeCCCCCHHHHHHHhcC----Ce--EEEEeCCCCCCeEEEEEeccccccccc
Q 010640 93 DQARLVVSAKSRR-----VPIFSSSLDVFKAPDGCINDANDFDGS----NY--VFVTESGTRRSRILGYVTKSDWENLSD 161 (505)
Q Consensus 93 ~~~~~v~~v~~~~-----~~~~~~p~~~~v~~~~tv~~a~~~~~~----~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~ 161 (505)
+++..++++..+. ++|..++ +++++++|+.+|++.|.+ ++ +||+|+ +++++|+||.+|+... .
T Consensus 40 ~e~~~i~~~l~~~~~~v~~iM~~~~--~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~---~~~lvGivt~~dll~~-~ 113 (205)
T 3kxr_A 40 RQRQRFELYDQYSENEIGRYTDHQM--LVLSDKATVAQAQRFFRRIELDCNDNLFIVDE---ADKYLGTVRRYDIFKH-E 113 (205)
T ss_dssp HHHHHHHHHHHSCTTCGGGGCBCCC--CEEETTCBHHHHHHHHHHCCCTTCCEEEEECT---TCBEEEEEEHHHHTTS-C
T ss_pred HHHHHHHHHhCCCcchHHhhccCce--EEECCCCcHHHHHHHHHhhCccCeeEEEEEcC---CCeEEEEEEHHHHHhC-C
Confidence 3455666655443 5788888 999999999999999864 33 899998 8999999999999643 3
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
...++.++|++ +++++++++++.+++++|.++++..+||||+ |+++|+||.+|+++...
T Consensus 114 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 114 PHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVR 173 (205)
T ss_dssp TTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 46789999998 9999999999999999999999999999998 99999999999998864
No 47
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=3.1e-15 Score=129.95 Aligned_cols=110 Identities=12% Similarity=0.012 Sum_probs=93.8
Q ss_pred Ccccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccc-----cccccccccccCCC
Q 010640 106 VPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSD-----NKVKIFDYMRDCSS 175 (505)
Q Consensus 106 ~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~-----~~~~v~~im~~~~~ 175 (505)
++|+. ++ +++++++++.+|++.|.+ ++ +||++++ +++++|+||.+|++.... ...++.++| + +
T Consensus 6 ~iM~~~~~~--~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~--~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~--~ 78 (130)
T 3hf7_A 6 DIMVPRNEI--VGIDINDDWKSIVRQLTHSPHGRIVLYRDS--LDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-D--E 78 (130)
T ss_dssp HHSEEGGGC--CEEETTSCHHHHHHHHHTCSSSEEEEESSS--GGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-B--C
T ss_pred HhCccHHHE--EEEcCCCCHHHHHHHHHHCCCCeEEEEcCC--CCcEEEEEEHHHHHHHHhccCccchhhHHHhc-c--C
Confidence 35543 45 899999999999999999 77 9999741 589999999999973221 235789999 4 7
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 176 NVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 176 ~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
++++++++++.+++++|.+++++.+||+|+ |+++|+||++|+++...
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 899999999999999999999999999998 99999999999999764
No 48
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.55 E-value=8.6e-15 Score=130.00 Aligned_cols=112 Identities=15% Similarity=0.145 Sum_probs=99.9
Q ss_pred hccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc----c-cccccccccc
Q 010640 102 KSRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS----D-NKVKIFDYMR 171 (505)
Q Consensus 102 ~~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~----~-~~~~v~~im~ 171 (505)
.+..++|.. ++ +++++++++.++++.|.+ ++ +||+|+ +|+++|+||.+|+.... . ...++.++|+
T Consensus 28 ~~v~dim~~~~~~--~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 102 (149)
T 3k2v_A 28 LRVNDIMHTGDEI--PHVGLQATLRDALLEITRKNLGMTAICDD---DMNIIGIFTDGDLRRVFDTGVDMRDASIADVMT 102 (149)
T ss_dssp SBGGGTSBCGGGS--CEECTTCBHHHHHHHHHHHTSSEEEEECT---TCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSE
T ss_pred cCHHHHhcCCCCC--eEECCCCcHHHHHHHHHhCCCcEEEEECC---CCcEEEEecHHHHHHHHhcCCCcccCcHHHHcC
Confidence 366678887 77 999999999999999998 76 999997 89999999999996321 1 4678999999
Q ss_pred cCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhh
Q 010640 172 DCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERL 220 (505)
Q Consensus 172 ~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~ 220 (505)
+ +++++.+++++.+++++|.+++++.+||+|+++++|+||++||+++
T Consensus 103 ~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil~a 149 (149)
T 3k2v_A 103 R--GGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLLRA 149 (149)
T ss_dssp E--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHTCC
T ss_pred C--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhhcC
Confidence 8 8999999999999999999999999999999999999999999863
No 49
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.55 E-value=8.4e-15 Score=129.70 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=99.8
Q ss_pred ccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc------------------
Q 010640 103 SRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL------------------ 159 (505)
Q Consensus 103 ~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~------------------ 159 (505)
+..++|.. ++ +++++++++.++++.|.+ ++ +||+|+ +++++|+||.+|+...
T Consensus 6 ~v~~im~~~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 6 TVGEFMTKKEDL--HVVKPTTTVDEALELLVENRITGFPVIDE---DWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp BGGGTSEESTTC--CCBCTTSBHHHHHHHHHHTTCSEEEEECT---TCBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred EhhhccCCCCCC--eEECCCCcHHHHHHHHHHcCCceEEEEeC---CCeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 45567777 56 899999999999999988 76 999997 7999999999999632
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 160 SDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 160 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
.....++.++|++ +++++.+++++.+++++|.+++++.+||+|+ |+++|+||++||++....
T Consensus 81 ~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 81 KTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp ---CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 1234689999998 8999999999999999999999999999998 999999999999998754
No 50
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.54 E-value=8.8e-15 Score=128.49 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=98.2
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCC--eEEEEEecccccccc----ccccccccccccC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRS--RILGYVTKSDWENLS----DNKVKIFDYMRDC 173 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g--~lvGivt~~Dl~~~~----~~~~~v~~im~~~ 173 (505)
+..++|..++ +++++++++.+++++|.+ ++ +||+|+ ++ +++|+||.+|+.... ....++.++|++
T Consensus 6 ~v~~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~- 79 (141)
T 2rih_A 6 RTSELLKRPP--VSLPETATIREVATELAKNRVGLAVLTAR---DNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANS- 79 (141)
T ss_dssp BGGGGCCSCC--EEEETTCBHHHHHHHHHHHTCSEEEEEET---TEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBC-
T ss_pred EHHHHhcCCC--eEeCCCCcHHHHHHHHHHcCCCEEEEEcC---CCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCC-
Confidence 4556777777 999999999999999988 76 999997 77 999999999996321 235789999998
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 174 SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 174 ~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
+++++.++ ++.+++++|.+++++++||+|+ |+++|+||++|+++..
T Consensus 80 -~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 80 -PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp -CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred -CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 99999999 9999999999999999999998 9999999999998764
No 51
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.54 E-value=6.3e-15 Score=127.31 Aligned_cols=112 Identities=17% Similarity=0.053 Sum_probs=98.9
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccc----cccccccccccCCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSD----NKVKIFDYMRDCSS 175 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~----~~~~v~~im~~~~~ 175 (505)
...++|..++ .++++++++.++++.|.+ ++ +||+| +++++|+||.+|+..... ...++.++|++ +
T Consensus 6 ~v~~~m~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~ 77 (128)
T 3gby_A 6 TFSYLAETDY--PVFTLGGSTADAARRLAASGCACAPVLD----GERYLGMVHLSRLLEGRKGWPTVKEKLGEELLE--T 77 (128)
T ss_dssp BGGGGCBCCS--CCEETTSBHHHHHHHHHHHTCSEEEEEE----TTEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCB--C
T ss_pred EHHHhhcCCc--ceECCCCCHHHHHHHHHHCCCcEEEEEE----CCEEEEEEEHHHHHHHHhhCCcccCcHHHHccC--C
Confidence 3456788888 999999999999999998 76 99998 589999999999973321 22679999998 9
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 176 NVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 176 ~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+.++.+++++.++++.|.+++.+++||+|+ |+++|+||++|+++...
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 999999999999999999999999999998 99999999999998764
No 52
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.54 E-value=9.5e-15 Score=131.46 Aligned_cols=112 Identities=14% Similarity=0.191 Sum_probs=99.5
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc-------------ccccccc
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL-------------SDNKVKI 166 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~-------------~~~~~~v 166 (505)
+..++|..++ +++++++|+.+|+++|.+ ++ +||+|+ +++++|+||.+|+... .....++
T Consensus 6 ~v~dim~~~~--~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v 80 (160)
T 2o16_A 6 KVEDMMTRHP--HTLLRTHTLNDAKHLMEALDIRHVPIVDA---NKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPL 80 (160)
T ss_dssp BGGGTSEESC--CCBCTTSBHHHHHHHHHHHTCSEEEEECT---TCBEEEEEEHHHHHHHHHHHCC---------CCCBH
T ss_pred cHHHHhcCCC--eEECCCCcHHHHHHHHHHcCCCEEEEEcC---CCcEEEEEeHHHHHHHHHHhhcccccccchhcccCH
Confidence 4556787788 899999999999999988 76 999997 8999999999999622 1235689
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhh
Q 010640 167 FDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLK 221 (505)
Q Consensus 167 ~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~ 221 (505)
.++|++ +++++.+++++.+++++|.+++++.+||+|+|+++|+||+.||++..
T Consensus 81 ~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~~ 133 (160)
T 2o16_A 81 FEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTIA 133 (160)
T ss_dssp HHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHHH
T ss_pred HHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHH
Confidence 999998 99999999999999999999999999999999999999999999875
No 53
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.53 E-value=5.1e-15 Score=132.16 Aligned_cols=114 Identities=25% Similarity=0.261 Sum_probs=98.8
Q ss_pred ccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEE-eCCCCCCeEEEEEeccccccc--cccccccccccccCC
Q 010640 103 SRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVT-ESGTRRSRILGYVTKSDWENL--SDNKVKIFDYMRDCS 174 (505)
Q Consensus 103 ~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVv-d~~~~~g~lvGivt~~Dl~~~--~~~~~~v~~im~~~~ 174 (505)
+..++|.. ++ +++++++++.+|++.|.+ ++ +||+ +++ +++++|+||.+|+... .....++.++| +
T Consensus 21 ~v~~iM~~~~~~--~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~--~~~lvGivt~~dl~~~~~~~~~~~v~~~m-~-- 93 (153)
T 3oco_A 21 VASDVMVDRTSM--SVVDVDETIADALLLYLEEQYSRFPVTADND--KDKIIGYAYNYDIVRQARIDDKAKISTIM-R-- 93 (153)
T ss_dssp BHHHHSEEGGGC--CCEETTSBHHHHHHHHHHHCCSEEEEEETTE--EEEEEEEEEHHHHHHHHHHHTTSBGGGTC-B--
T ss_pred EeeeEecchhhe--EEEcCCCCHHHHHHHHHhCCCCEEEEEECCC--CCcEEEEEEHHHHHhHHhcCCCCcHHHHh-C--
Confidence 34457775 67 899999999999999998 77 9999 531 4899999999999732 12367899999 7
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
+++++.+++++.+++++|.+++++.+||+|+ |+++|+||++|+++....
T Consensus 94 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 94 DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 8999999999999999999999999999998 999999999999998753
No 54
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.52 E-value=7.5e-15 Score=134.07 Aligned_cols=111 Identities=17% Similarity=0.164 Sum_probs=98.0
Q ss_pred CCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc--------------------
Q 010640 105 RVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL-------------------- 159 (505)
Q Consensus 105 ~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~-------------------- 159 (505)
.++|.. ++ +++++++++.+|+++|.+ ++ +||+|+ +++++|+||.+|+...
T Consensus 7 ~dim~~~~~~--~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 81 (180)
T 3sl7_A 7 GDFMTPRQNL--HVVKPSTSVDDALELLVEKKVTGLPVIDD---NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDST 81 (180)
T ss_dssp HHHSEEGGGC--CCBCTTSBHHHHHHHHHHHTCSEEEEECT---TCBEEEEEEHHHHTCC-------------------C
T ss_pred HHhcCCCCCc--eeeCCCCcHHHHHHHHHHcCCCeEEEECC---CCeEEEEEEHHHHHhhhhhccccCCcccccccccch
Confidence 345666 56 899999999999999998 76 999998 8999999999999631
Q ss_pred ------------cccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 160 ------------SDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 160 ------------~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
.....++.++|++ +++++++++++.+++++|.+++++++||+|+ |+++|+||++||++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 82 WKTFNELQKLISKTYGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp CCSHHHHHHHHHTTTTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hhhhHHHHHHHhccccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 1235689999998 8999999999999999999999999999997 99999999999998764
No 55
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.52 E-value=6.6e-15 Score=127.78 Aligned_cols=112 Identities=20% Similarity=0.224 Sum_probs=98.6
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccc-cc-c---c-cccccccccccC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWE-NL-S---D-NKVKIFDYMRDC 173 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~-~~-~---~-~~~~v~~im~~~ 173 (505)
+..++|..++ +++++++++.++++.|.+ ++ +||+|+ +++++|+||.+|+. .. . . ...++.++|++
T Consensus 9 ~v~~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~- 82 (133)
T 1y5h_A 9 TARDIMNAGV--TCVGEHETLTAAAQYMREHDIGALPICGD---DDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARD- 82 (133)
T ss_dssp CHHHHSEETC--CCEETTSBHHHHHHHHHHHTCSEEEEECG---GGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTT-
T ss_pred CHHHHhcCCc--eEeCCCCCHHHHHHHHHHhCCCeEEEECC---CCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcC-
Confidence 4445677777 899999999999999988 66 999987 89999999999996 22 1 1 35689999998
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhh
Q 010640 174 SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLK 221 (505)
Q Consensus 174 ~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~ 221 (505)
+++++++++++.+++++|.+++.+.+||+|+|+++|+||++||++..
T Consensus 83 -~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 83 -SIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHL 129 (133)
T ss_dssp -CCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHTC
T ss_pred -CCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHH
Confidence 99999999999999999999999999999999999999999999875
No 56
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.52 E-value=2.2e-14 Score=131.08 Aligned_cols=115 Identities=13% Similarity=0.064 Sum_probs=97.0
Q ss_pred hccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCC-CeEEEEEecccccccc--ccccccccccccCCC
Q 010640 102 KSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRR-SRILGYVTKSDWENLS--DNKVKIFDYMRDCSS 175 (505)
Q Consensus 102 ~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~-g~lvGivt~~Dl~~~~--~~~~~v~~im~~~~~ 175 (505)
.++.++|+.....+++++++++.+++++|.+ ++ +||+++ + ++++|+||.+|++... ....++. |.+ +
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~~~lvGivt~~Dl~~~~~~~~~~~v~--~~~--~ 108 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG---SLDEVVGIGRAKDLVADLITEGRVRRN--RLR--D 108 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS---STTSEEEEEEHHHHHHHHHHHSSCCGG--GSB--C
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC---CCCCEEEEEEHHHHHHHHhcCCcchhH--hcC--C
Confidence 3566788743222889999999999999998 77 999986 5 8999999999997432 2345677 445 7
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 176 NVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 176 ~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
++++++++++.+++++|.+++++.+||+|+ |+++|+||++||++.+..
T Consensus 109 ~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 109 PIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp CCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred CeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 899999999999999999999999999998 999999999999998764
No 57
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=1.6e-14 Score=130.68 Aligned_cols=111 Identities=20% Similarity=0.198 Sum_probs=98.5
Q ss_pred Ccccc---CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc------cccccccccccccC
Q 010640 106 VPIFS---SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL------SDNKVKIFDYMRDC 173 (505)
Q Consensus 106 ~~~~~---~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~------~~~~~~v~~im~~~ 173 (505)
++|.. ++ +++++++++.+|+++|.+ ++ +||+|+ +|+++|+||.+|+... .....++.++|++
T Consensus 28 dim~~~~~~~--~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~- 101 (165)
T 3fhm_A 28 DLLDRKGRDV--VTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTK- 101 (165)
T ss_dssp HHHHHHCSCC--CEECTTSBHHHHHHHHHHHTCSEEEEECT---TSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTSBS-
T ss_pred HHhccCCCCC--eEECCCCCHHHHHHHHHHcCCCEEEEEcC---CCeEEEEEEHHHHHHHHHhcCCccccCCHHHHhcC-
Confidence 45654 56 899999999999999988 76 999997 8999999999999632 2245789999998
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcC
Q 010640 174 SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGY 223 (505)
Q Consensus 174 ~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~ 223 (505)
+++++.+++++.+++++|.+++++.+||+|+|+++|+||+.||++....
T Consensus 102 -~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 102 -NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIG 150 (165)
T ss_dssp -SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHTTC
T ss_pred -CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998754
No 58
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.51 E-value=2.3e-14 Score=128.74 Aligned_cols=114 Identities=15% Similarity=0.103 Sum_probs=100.2
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc-----cccccccccccccCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL-----SDNKVKIFDYMRDCS 174 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~-----~~~~~~v~~im~~~~ 174 (505)
+..++|.. | +++++++++.+|++.|.+ ++ +||+|+ +++++|+||.+|+... .....++.++|++..
T Consensus 18 ~v~~im~~-~--~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 91 (159)
T 3fv6_A 18 QVKDFQSI-P--VVIHENVSVYDAICTMFLEDVGTLFVVDR---DAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMP 91 (159)
T ss_dssp BGGGSCBC-C--CEEETTSBHHHHHHHHHHHTCSEEEEECT---TSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETT
T ss_pred CHHHHcCC-C--EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCC
Confidence 55667764 7 799999999999999998 76 999997 8999999999999732 124678999998766
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-C---eeeeEEeechhhhhhc
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-G---ERLDVVTREDVERLKG 222 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g---~l~GiIt~~dil~~~~ 222 (505)
+++++.+++++.+++++|.+++++.+||+|+ | +++|+||++||++...
T Consensus 92 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 92 NITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred CcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 7899999999999999999999999999998 7 9999999999998765
No 59
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.51 E-value=2.2e-14 Score=128.13 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=97.7
Q ss_pred hccCCccc--cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccc---------cccccc
Q 010640 102 KSRRVPIF--SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSD---------NKVKIF 167 (505)
Q Consensus 102 ~~~~~~~~--~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~---------~~~~v~ 167 (505)
.+..++|. .++ +++++++++.+++++|.+ ++ +||+|+ +|+++|+||.+|+..... ...++.
T Consensus 15 ~~v~dim~p~~~~--~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~ 89 (156)
T 3ctu_A 15 GQEETFLTPAKNL--AVLIDTHNADHATLLLSQMTYTRVPVVTD---EKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIV 89 (156)
T ss_dssp TTGGGGEEEGGGC--CCEETTSBHHHHHHHHTTCSSSEEEEECC----CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG
T ss_pred HHHHHHcCcccCc--eEECCCCCHHHHHHHHHHCCCceEeEECC---CCEEEEEEcHHHHHHHHHhccccccccccCcHH
Confidence 35567888 566 899999999999999999 76 999997 899999999999963211 267899
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 168 DYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 168 ~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
++|++ +++++.+++++.++++.|.+++ ++||+|+ |+++|+||++|+++....
T Consensus 90 ~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 90 HMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp GGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred HhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 99998 9999999999999999999986 7999998 999999999999998653
No 60
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.50 E-value=3.8e-14 Score=122.89 Aligned_cols=112 Identities=14% Similarity=0.211 Sum_probs=98.4
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc----ccccccccccccCCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS----DNKVKIFDYMRDCSS 175 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~----~~~~~v~~im~~~~~ 175 (505)
+..++|..++ +++++++++.++++.|.+ ++ +||+| +++++|+||.+|+.... ....++.++|++ +
T Consensus 5 ~v~~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~--~ 76 (133)
T 2ef7_A 5 IVKEYMKTQV--ISVTKDAKLNDIAKVMTEKNIGSVIVVD----GNKPVGIITERDIVKAIGKGKSLETKAEEFMTA--S 76 (133)
T ss_dssp BGGGTSBCSC--CEEETTCBHHHHHHHHHHHTCSEEEEEE----TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE--C
T ss_pred cHHHhccCCC--EEECCCCcHHHHHHHHHhcCCCEEEEEE----CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC--C
Confidence 3445777777 899999999999999988 66 99998 68999999999996321 235789999998 9
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 176 NVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 176 ~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+.++++++++.++++.|.+++.+.+||+|+ |+++|+||+.|+++...
T Consensus 77 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 77 LITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 999999999999999999999999999997 99999999999998764
No 61
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.50 E-value=2.1e-14 Score=127.42 Aligned_cols=111 Identities=11% Similarity=0.066 Sum_probs=96.6
Q ss_pred ccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc----------ccccccc
Q 010640 103 SRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS----------DNKVKIF 167 (505)
Q Consensus 103 ~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~----------~~~~~v~ 167 (505)
+..++|.. ++ +++++++++.+|++.|.+ ++ +||+|+ +|+++|+||.+|+.... ....++.
T Consensus 16 ~v~~im~~~~~~--~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~ 90 (150)
T 3lqn_A 16 FVKDLMISSEKV--AHVQIGNGLEHALLVLVKSGYSAIPVLDP---MYKLHGLISTAMILDGILGLERIEFERLEEMKVE 90 (150)
T ss_dssp BHHHHSEEGGGS--CCBCTTSBHHHHHHHHHHHTCSEEEEECT---TCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGG
T ss_pred ChhhcccCCCce--EEECCCCcHHHHHHHHHHcCCcEEEEECC---CCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHH
Confidence 44456763 46 899999999999999988 76 999997 89999999999996211 2457899
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 168 DYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 168 ~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
++|++ +++++.+++++.+++++|.++++ +||+|+ |+++|+||++||++...
T Consensus 91 ~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 91 QVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLN 142 (150)
T ss_dssp GTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHH
Confidence 99998 99999999999999999999987 999997 99999999999998764
No 62
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.50 E-value=3.8e-14 Score=168.87 Aligned_cols=220 Identities=15% Similarity=0.125 Sum_probs=143.5
Q ss_pred eeeeeeecCcccccceEEEccchh-hhHHHHHHHHHHcCCeeEEc--CCCCHHHHHHHHHhhhccCCccccCCCeeEeCC
Q 010640 43 VSLSTRLTRNIDLSLPCVASPMDT-VTEDYMAAAMAALGGIGIVH--SNCTAADQARLVVSAKSRRVPIFSSSLDVFKAP 119 (505)
Q Consensus 43 ~~~~~~lt~~~~l~~Pli~a~m~~-vt~~~ma~al~~~Gg~g~i~--~~~~~~~~~~~v~~v~~~~~~~~~~p~~~~v~~ 119 (505)
+.+.|++|.-+. ..|||+++|.. ....+|+.+++++||+|+|. ...+++..++.+++++...+ .
T Consensus 577 ~~~~t~~t~llg-~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~----~-------- 643 (2051)
T 2uv8_G 577 IFVETKFSKLIG-RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIE----K-------- 643 (2051)
T ss_dssp EEEECHHHHHHS-SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSC----T--------
T ss_pred hhHHHHHHHhhC-ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcC----C--------
Confidence 456788887777 58999999984 44899999999999999993 35688998888888776442 1
Q ss_pred CCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCe
Q 010640 120 DGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDF 199 (505)
Q Consensus 120 ~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~ 199 (505)
++.+|+= +|.. + +.
T Consensus 644 -------------------------~~~~gvN-----------------~~~~--~-----~~----------------- 657 (2051)
T 2uv8_G 644 -------------------------GSTFGIN-----------------LIYV--N-----PF----------------- 657 (2051)
T ss_dssp -------------------------TCCEEEE-----------------EETT--C-----TT-----------------
T ss_pred -------------------------CCceEEE-----------------Eeec--C-----hh-----------------
Confidence 1112210 0100 0 00
Q ss_pred eEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccE--EEEeCCCCCchhHH
Q 010640 200 VVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNV--VVLDSSQGNSSFQI 277 (505)
Q Consensus 200 lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~--I~i~~~~g~~~~~~ 277 (505)
......+.++.+++.|+.+ +.+ +.|.+. ..
T Consensus 658 ---------------------------------------------~~~~~~~~~~~~~~~gv~i~~v~~--~ag~p~-~~ 689 (2051)
T 2uv8_G 658 ---------------------------------------------MLQWGIPLIKELRSKGYPIQFLTI--GAGVPS-LE 689 (2051)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHTTCSEEEEEE--ESSCCC-HH
T ss_pred ---------------------------------------------hhhhhHHHHHHHHHcCCCcceEEe--cCCCCc-hh
Confidence 0001125667778888888 544 444432 11
Q ss_pred HHHHHHHHhCCCceEEE---cccCCHHHHHHHHHcCCCEE---EE-ccCCcceeecccccccCcChHHHHHHHHHHHhhc
Q 010640 278 EMIKYAKKTYPELDVIG---GNVVTMYQAQNLIEAGVDGL---RV-GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS 350 (505)
Q Consensus 278 ~~i~~l~~~~~~~~Vi~---g~V~t~e~a~~l~~aGad~I---~v-~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~ 350 (505)
..+..+... ++++|. +.+.....+..+.++|+|++ .+ |..+|++... .+.+.+++..+ .+.++..
T Consensus 690 ~~~~~i~~l--G~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~---~d~~~~~l~l~---~~v~~~~ 761 (2051)
T 2uv8_G 690 VASEYIETL--GLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSF---EDAHTPMLQMY---SKIRRHP 761 (2051)
T ss_dssp HHHHHHHHS--CCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCS---CCSSHHHHHHH---HHHTTCT
T ss_pred hHHHHHHHc--CCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCc---ccccccHHHHH---HHHHhcC
Confidence 222223232 565554 33345566788888999993 22 3334443321 11223333333 4445556
Q ss_pred CCcEEecCCCCCHHHHHHHH-----------HhCCCEEEecccccCCCCCCccceeec
Q 010640 351 GVPVIADGGISNSGHIVKAL-----------VLGASTVMMGSFLAGSTEAPGAYVYQN 397 (505)
Q Consensus 351 ~ipvIa~GGI~~~~di~kal-----------~lGA~~V~~G~~f~~~~Es~~~~~~~~ 397 (505)
++|||++|||.++++++.|| +|||++|+|||+|+.|.||+.+..+|+
T Consensus 762 ~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~K~ 819 (2051)
T 2uv8_G 762 NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDAKK 819 (2051)
T ss_dssp TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHHHH
T ss_pred CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCHHHHH
Confidence 89999999999999999999 899999999999999999999988874
No 63
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.50 E-value=3.5e-14 Score=123.59 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=97.5
Q ss_pred cCCccc---cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccc-c-c----ccccccccccc
Q 010640 104 RRVPIF---SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWEN-L-S----DNKVKIFDYMR 171 (505)
Q Consensus 104 ~~~~~~---~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~-~-~----~~~~~v~~im~ 171 (505)
..++|. .++ +++++++++.++++.|.+ ++ +||+| +++++|+||.+|+.. . . ....++.++|+
T Consensus 8 v~~im~~~~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (135)
T 2rc3_A 8 VKHLLQEKGHTV--VAIGPDDSVFNAMQKMAADNIGALLVMK----DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMT 81 (135)
T ss_dssp HHHHHHHHCCCC--CEECTTSBHHHHHHHHHHHTCSEEEEEE----TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSB
T ss_pred HHHHHhcCCCCc--EEECCCCcHHHHHHHHHhcCCCEEEEEE----CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhcc
Confidence 334565 567 899999999999999988 76 99998 689999999999962 2 1 24678999999
Q ss_pred cCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 172 DCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 172 ~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
+ ++.++.+++++.++++.|.+++++.+||+|+|+++|+||++|+++...
T Consensus 82 ~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 82 R--QVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp C--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred C--CCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHHHH
Confidence 8 999999999999999999999999999999999999999999998764
No 64
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.50 E-value=5.5e-14 Score=122.73 Aligned_cols=113 Identities=15% Similarity=0.251 Sum_probs=99.7
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccc-c-cc---ccccccccccccCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWE-N-LS---DNKVKIFDYMRDCS 174 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~-~-~~---~~~~~v~~im~~~~ 174 (505)
+..++|..++ +++++++++.++++.|.+ ++ +||+|+ +|+++|+||.+|+. . .. ....++.++|++
T Consensus 8 ~v~~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~-- 80 (138)
T 2yzi_A 8 PIKVYMTKKL--LGVKPSTSVQEASRLMMEFDVGSLVVIND---DGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTR-- 80 (138)
T ss_dssp BGGGTCBCCC--CEECTTSBHHHHHHHHHHHTCSEEEEECT---TSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBC--
T ss_pred hHHHHhcCCC--eEECCCCcHHHHHHHHHHcCCCEEEEEcC---CCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhC--
Confidence 4556777778 899999999999999988 76 999997 89999999999994 2 21 235789999998
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
+++++++++++.+++++|.+++.+++ |+|+ |+++|+||++|+++....
T Consensus 81 ~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 81 NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 99999999999999999999999999 9997 999999999999998754
No 65
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.49 E-value=3.5e-14 Score=121.55 Aligned_cols=109 Identities=19% Similarity=0.156 Sum_probs=96.5
Q ss_pred CccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-----ccccccccccccCCCce
Q 010640 106 VPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS-----DNKVKIFDYMRDCSSNV 177 (505)
Q Consensus 106 ~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~-----~~~~~v~~im~~~~~~~ 177 (505)
++|..++ +++++++++.++++.|.+ ++ +||+| +++++|+||.+|+.... ....++.++|++ ++.
T Consensus 5 ~~m~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~--~~~ 76 (125)
T 1pbj_A 5 DVMVTDV--DTIDITASLEDVLRNYVENAKGSSVVVK----EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLV 76 (125)
T ss_dssp HHCBCSC--CEEETTCBHHHHHHHHHHHCCCEEEEEE----TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBC--GGG
T ss_pred HhcCCCc--eEECCCCcHHHHHHHHHHcCCCEEEEEe----CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCC--CCe
Confidence 3566677 899999999999999988 66 99998 69999999999996321 136789999998 999
Q ss_pred EecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 178 SVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 178 ~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
++.+++++.++++.|.+++.+.+||+|+|+++|+||++|+++...
T Consensus 77 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 77 TISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAKM 121 (125)
T ss_dssp EECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999999999999998764
No 66
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.49 E-value=4.1e-14 Score=130.30 Aligned_cols=112 Identities=18% Similarity=0.207 Sum_probs=99.5
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc------cccccccccccccC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL------SDNKVKIFDYMRDC 173 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~------~~~~~~v~~im~~~ 173 (505)
+..++|.+++ +++++++++.+|+++|.+ ++ +||+|+ +|+++|+||.+|+... .....++.++|++
T Consensus 10 ~v~~im~~~~--~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~- 83 (184)
T 1pvm_A 10 RVEKIMNSNF--KTVNWNTTVFDAVKIMNENHLYGLVVKDD---NGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRK- 83 (184)
T ss_dssp BGGGTSBTTC--CEEETTCBHHHHHHHHHHHTCCEEEEECT---TSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBS-
T ss_pred CHHHhcCCCC--eEECCCCcHHHHHHHHHHcCCCEEEEEcC---CCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCC-
Confidence 4456777777 899999999999999988 76 999987 7999999999999632 1245689999998
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 174 SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 174 ~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
+++++.+++++.+++++|.+++.+.+||+|+ |+++|+||+.||++..
T Consensus 84 -~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 84 -PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp -SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTS
T ss_pred -CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999864
No 67
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.48 E-value=4.2e-14 Score=123.37 Aligned_cols=112 Identities=12% Similarity=0.150 Sum_probs=97.7
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccc-ccc----cccccccccccccCC
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDW-ENL----SDNKVKIFDYMRDCS 174 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl-~~~----~~~~~~v~~im~~~~ 174 (505)
+..++|..++ +++++++++.++++.|.+ ++ +||+|+ +++++|+||.+|+ ... .....++.++|++
T Consensus 9 ~v~~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~-- 81 (138)
T 2p9m_A 9 KVKDVMTKNV--ITAKRHEGVVEAFEKMLKYKISSLPVIDD---ENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK-- 81 (138)
T ss_dssp BGGGTSBCSC--CCEETTSBHHHHHHHHHHHTCCEEEEECT---TCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCS--
T ss_pred CHHHhhcCCc--eEECCCCcHHHHHHHHHHCCCcEEEEECC---CCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCC--
Confidence 3446777777 899999999999999988 66 999997 8999999999999 521 1246689999998
Q ss_pred CceEecCCCCHHHHHHHHHHCC-----CCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 175 SNVSVPANYDLGQIDEVLEKND-----VDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~-----i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
++.++++++++.++++.|.+++ .+.+||+|+ |+++|+||+.|+++..
T Consensus 82 ~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 134 (138)
T 2p9m_A 82 DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTI 134 (138)
T ss_dssp SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHH
Confidence 9999999999999999999999 999999997 9999999999999865
No 68
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.47 E-value=7.2e-14 Score=124.78 Aligned_cols=113 Identities=13% Similarity=0.148 Sum_probs=98.5
Q ss_pred hccCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc----------cccccc
Q 010640 102 KSRRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS----------DNKVKI 166 (505)
Q Consensus 102 ~~~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~----------~~~~~v 166 (505)
....++|.. ++ ++++++.++.+|++.|.+ ++ +||+|+ +|+++|+||.+|+.... ....++
T Consensus 11 ~~v~~im~~~~~~--~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v 85 (157)
T 2emq_A 11 MTVKPFLIPADKV--AHVQPGNYLDHALLVLTKTGYSAIPVLDT---SYKLHGLISMTMMMDAILGLERIEFERLETMKV 85 (157)
T ss_dssp CBSTTTCEEGGGS--CCBCTTSBHHHHHHHHHHSSSSEEEEECT---TCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBG
T ss_pred CcHHhhccCCccc--eEECCCCcHHHHHHHHHHCCceEEEEEcC---CCCEEEEeeHHHHHHHHhcccccchHHhcCCcH
Confidence 355667876 67 899999999999999988 66 999997 89999999999996321 135689
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 167 FDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 167 ~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
.++|.+ +++++++++++.++++.|.++++ +||+|+ |+++|+||++|+++....
T Consensus 86 ~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 86 EEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred HHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 999998 99999999999999999999987 999998 999999999999988653
No 69
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.47 E-value=6.1e-14 Score=123.03 Aligned_cols=111 Identities=14% Similarity=0.063 Sum_probs=95.0
Q ss_pred ccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc------ccccccccccccCC---
Q 010640 107 PIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS------DNKVKIFDYMRDCS--- 174 (505)
Q Consensus 107 ~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~------~~~~~v~~im~~~~--- 174 (505)
+|..++ +++++++++.++++.|.+ ++ +||+|+ +++++|+||.+|+.... ....++.++|.+..
T Consensus 16 ~~~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~ 90 (144)
T 2nyc_A 16 ITQDNM--KSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDF 90 (144)
T ss_dssp CBCSSC--CCBCTTSBHHHHHHHHHHHTCSEEEEECT---TCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC---
T ss_pred CCCCCc--eEECCCCcHHHHHHHHHHcCcceeeEEcC---CCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCcccc
Confidence 666677 899999999999999988 76 999997 89999999999996321 12568999997521
Q ss_pred -CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 175 -SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 175 -~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+++++.+++++.+++++|.+++.+.+||+|+ |+++|+||++||++...
T Consensus 91 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 91 EGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp ---CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 5789999999999999999999999999998 99999999999998753
No 70
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.45 E-value=9e-15 Score=159.93 Aligned_cols=163 Identities=12% Similarity=0.114 Sum_probs=122.0
Q ss_pred eeeeecCcccccceEEEccchh-hhH----HHHHHHHHHcCCeeEEc---CCCCHHHHHHHHHhhhccCCccc--cCCCe
Q 010640 45 LSTRLTRNIDLSLPCVASPMDT-VTE----DYMAAAMAALGGIGIVH---SNCTAADQARLVVSAKSRRVPIF--SSSLD 114 (505)
Q Consensus 45 ~~~~lt~~~~l~~Pli~a~m~~-vt~----~~ma~al~~~Gg~g~i~---~~~~~~~~~~~v~~v~~~~~~~~--~~p~~ 114 (505)
+..|+|+++....|+|.+.+-. .+. ..+...+.+..++.... .+.. +-.+..++|. +++
T Consensus 397 i~~E~tg~~~~~lpl~ia~~~a~~v~~~~~~~iY~~~~~~k~lp~l~~~~~~~~---------~~~~V~diM~p~~~v-- 465 (632)
T 3org_A 397 IIFEVTGQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRDRS---------PEMTAREIMHPIEGE-- 465 (632)
T ss_dssp HHHHHTCCCSCSHHHHHHHHHHHHHHHHHCCCHHHHHHHHTTCCEEEEECTTCC---------TTSBHHHHCBCTTTS--
T ss_pred HHHHHhCChhHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCcccccccccc---------ccCcHHHHhhcCCCc--
Confidence 7899999999999998877522 111 12333334444544331 1110 1123445777 667
Q ss_pred eEeCCCCCHHHHHHHhc-C-Ce--EEEEeCCCCCCeEEEEEecccccccccc----------------------------
Q 010640 115 VFKAPDGCINDANDFDG-S-NY--VFVTESGTRRSRILGYVTKSDWENLSDN---------------------------- 162 (505)
Q Consensus 115 ~~v~~~~tv~~a~~~~~-~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~---------------------------- 162 (505)
+++++++|++|+.+.|. + ++ +||+|+ +++++|+||.+|++.....
T Consensus 466 ~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 542 (632)
T 3org_A 466 PHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIE 542 (632)
T ss_dssp CCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TCBBCCEESHHHHTTTTTTC---------------------------
T ss_pred eEecCCCcHHHHHHHHHhcCCcceEEEEec---CCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhcc
Confidence 89999999999999999 7 66 999998 8999999999999632100
Q ss_pred ------------------------ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhh
Q 010640 163 ------------------------KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVE 218 (505)
Q Consensus 163 ------------------------~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil 218 (505)
..++.++|++ +++++++++++.+++++|.+++++++||+|+|+++||||++|++
T Consensus 543 ~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G~lvGIVT~~Dll 620 (632)
T 3org_A 543 GLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVTERGKLVGIVEREDVA 620 (632)
T ss_dssp ----------------------------CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEEETTEEEEEEEGGGTE
T ss_pred cCCCCCcccchhhhcccceEeeccccccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehhhHH
Confidence 0137889999 99999999999999999999999999999669999999999999
Q ss_pred hhhcC
Q 010640 219 RLKGY 223 (505)
Q Consensus 219 ~~~~~ 223 (505)
+....
T Consensus 621 ~~~~~ 625 (632)
T 3org_A 621 YGYSN 625 (632)
T ss_dssp ECCCC
T ss_pred HHHhh
Confidence 87643
No 71
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.45 E-value=1.1e-13 Score=123.30 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=93.8
Q ss_pred cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc------ccccccccccc------cCC
Q 010640 110 SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS------DNKVKIFDYMR------DCS 174 (505)
Q Consensus 110 ~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~------~~~~~v~~im~------~~~ 174 (505)
.++ +++++++++.+|+++|.+ ++ +||+|+ +|+++|+||.+|+.... ....++.++|. +
T Consensus 29 ~~~--~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~-- 101 (152)
T 2uv4_A 29 ANI--AMVRTTTPVYVALGIFVQHRVSALPVVDE---KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE-- 101 (152)
T ss_dssp SSC--CCEETTCBHHHHHHHHHHHCCSEEEEECT---TSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHH--
T ss_pred CCc--eEeCCCCcHHHHHHHHHHcCCceEeEECC---CCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccC--
Confidence 566 889999999999999998 76 999997 89999999999996321 13568999996 6
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
+++++.+++++.+++++|.+++++.+||+|+ |+++|+||+.||++..
T Consensus 102 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 102 GVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 8899999999999999999999999999998 9999999999999875
No 72
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.45 E-value=9.7e-14 Score=133.80 Aligned_cols=112 Identities=12% Similarity=0.102 Sum_probs=93.3
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-------------------
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS------------------- 160 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~------------------- 160 (505)
+..++|..+| +++++++++.+|+++|.+ ++ +||+|+ +|+++|+||.+|+....
T Consensus 8 ~v~~im~~~~--~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 8 KVEDLEMDKI--APLAPEVSLKMAWNIMRDKNLKSIPVADG---NNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp BGGGSCCBCC--CCBCTTCBHHHHHHHHHHTTCSEEEEECT---TCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred cHHHhcCCCC--cEECCCCcHHHHHHHHHHcCCCEEEEEcC---CCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 4557888888 999999999999999998 77 999997 89999999999985110
Q ss_pred --------------------------------------------------------------------------------
Q 010640 161 -------------------------------------------------------------------------------- 160 (505)
Q Consensus 161 -------------------------------------------------------------------------------- 160 (505)
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence
Q ss_pred -------------------ccccccccccc-cCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhh
Q 010640 161 -------------------DNKVKIFDYMR-DCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVER 219 (505)
Q Consensus 161 -------------------~~~~~v~~im~-~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~ 219 (505)
....++.++|+ + +++++++++++.+++++|.+++++++||+|+ |+++|+||++|+++
T Consensus 163 ~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~ 240 (245)
T 3l2b_A 163 NNITVITTPHDSFTASRLIVQSLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIS 240 (245)
T ss_dssp HTCEEEECSSCHHHHHHHGGGGSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC----
T ss_pred cCCeEEEeCCChHHHHHHHhcCCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhc
Confidence 01246889999 6 9999999999999999999999999999998 99999999999998
Q ss_pred hh
Q 010640 220 LK 221 (505)
Q Consensus 220 ~~ 221 (505)
..
T Consensus 241 ~~ 242 (245)
T 3l2b_A 241 TH 242 (245)
T ss_dssp --
T ss_pred hh
Confidence 64
No 73
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.44 E-value=9.6e-14 Score=127.37 Aligned_cols=113 Identities=14% Similarity=0.184 Sum_probs=97.8
Q ss_pred ccCCccccC----CCeeEe--CCCCCHHHHHHHhcC-Ce--EEEE--eCCCCCCeEEEEEecccccccc-----------
Q 010640 103 SRRVPIFSS----SLDVFK--APDGCINDANDFDGS-NY--VFVT--ESGTRRSRILGYVTKSDWENLS----------- 160 (505)
Q Consensus 103 ~~~~~~~~~----p~~~~v--~~~~tv~~a~~~~~~-~~--~pVv--d~~~~~g~lvGivt~~Dl~~~~----------- 160 (505)
+..++|..+ + +++ ++++++.+|+++|.+ ++ +||+ |+ +++++|+||.+|+....
T Consensus 12 ~v~dim~~~~~~~~--~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~---~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 12 LAMDVMKPRRNDPL--LTVLTQDSMTVEDVETIISETTYSGFPVVVSRE---SQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp BHHHHSBSCTTSCC--CCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT---TCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred cHHHHhcccccCce--EEEecCCCccHHHHHHHHHhcCCCceeEEEECC---CCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 344566665 6 778 999999999999988 76 9999 66 89999999999986221
Q ss_pred ------------------ccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 161 ------------------DNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 161 ------------------~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
....++.++|++ +++++.+++++.+++++|.+++.+.+||+|+|+++|+||++||++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEEEEHHHHHHHHH
Confidence 235689999998 999999999999999999999999999999999999999999998764
No 74
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.43 E-value=2.1e-13 Score=122.09 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=96.6
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC---Ce-EEEEeCCCCCCeEEEEEeccccccc-------------------
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS---NY-VFVTESGTRRSRILGYVTKSDWENL------------------- 159 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~---~~-~pVvd~~~~~g~lvGivt~~Dl~~~------------------- 159 (505)
+..++|..++ +++++++|+.+|+++|.+ +. +||+|+ + +++|+||.+|+...
T Consensus 17 ~v~~im~~~~--~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~---~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~ 90 (157)
T 1o50_A 17 DVCKLISLKP--TVVEEDTPIEEIVDRILEDPVTRTVYVARD---N-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSM 90 (157)
T ss_dssp HHTTSSCCCC--EEECTTCBHHHHHHHHHHSTTCCEEEEEET---T-EEEEEEEHHHHHHHHHHHHHCCCC-------CC
T ss_pred cHhhcccCCC--ceECCCCCHHHHHHHHHhCCCCccEEEEEC---C-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHH
Confidence 4556788888 999999999999999976 45 799996 6 99999999999632
Q ss_pred -cccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 160 -SDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 160 -~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
.....++.++|++ ++++.+++++.+++++|.+++++.+||+|+ |+++|+||+.||++...
T Consensus 91 ~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 91 KRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 1245689999984 789999999999999999999999999997 99999999999998764
No 75
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.43 E-value=1e-13 Score=124.02 Aligned_cols=104 Identities=12% Similarity=0.159 Sum_probs=92.8
Q ss_pred eEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc--c----ccccccccccccCCCceEecCCCCH
Q 010640 115 VFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL--S----DNKVKIFDYMRDCSSNVSVPANYDL 185 (505)
Q Consensus 115 ~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~--~----~~~~~v~~im~~~~~~~~v~~~~~l 185 (505)
+++++++++.+|+++|.+ ++ +||++ +++++|+||.+|+... . ....++.++|++ +++++.+++++
T Consensus 24 ~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l 97 (157)
T 4fry_A 24 YTVTKNDFVYDAIKLMAEKGIGALLVVD----GDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA--KVRYVEPSQST 97 (157)
T ss_dssp CEEETTSBHHHHHHHHHHHTCSEEEEES----SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS--SCCCBCTTSBH
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEEee----CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC--CCcEECCCCcH
Confidence 789999999999999998 76 88854 7999999999999621 1 246789999998 99999999999
Q ss_pred HHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCC
Q 010640 186 GQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYP 224 (505)
Q Consensus 186 ~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~ 224 (505)
.+++++|.+++++++||+|+|+++|+||++||++.....
T Consensus 98 ~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 98 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp HHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999999999999987643
No 76
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.42 E-value=7e-14 Score=125.40 Aligned_cols=109 Identities=14% Similarity=0.049 Sum_probs=95.6
Q ss_pred CCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc----------ccccccccc
Q 010640 105 RVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS----------DNKVKIFDY 169 (505)
Q Consensus 105 ~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~----------~~~~~v~~i 169 (505)
.++|.. ++ +++++++++.+++++|.+ ++ +||+|+ +++++|+||.+|+.... ....++.++
T Consensus 17 ~~im~~~~~~--~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~ 91 (159)
T 1yav_A 17 GQFMIEADKV--AHVQVGNNLEHALLVLTKTGYTAIPVLDP---SYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEV 91 (159)
T ss_dssp HHHSEEGGGS--CCEETTCBHHHHHHHHHHHCCSEEEEECT---TCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHH
T ss_pred HHHhCCccce--EEECCCCcHHHHHHHHHhCCCcEEEEECC---CCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHh
Confidence 346666 67 899999999999999998 77 999997 88999999999996321 235689999
Q ss_pred cccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 170 MRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 170 m~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
|.+ +++++.+++++.+++++|.++++ +||+|+ |+++|+||++|+++...
T Consensus 92 m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 92 MLT--DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp SBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred cCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHH
Confidence 998 99999999999999999999887 999997 99999999999998764
No 77
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.42 E-value=1.5e-13 Score=123.32 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=96.1
Q ss_pred CCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-c--------ccccccccccc
Q 010640 105 RVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS-D--------NKVKIFDYMRD 172 (505)
Q Consensus 105 ~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~-~--------~~~~v~~im~~ 172 (505)
.++|..++ +++++++++.+|+++|.+ ++ +||+|++ ++++++|+||.+|+.... . ...++.++|.+
T Consensus 16 ~dim~~~~--~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~ 92 (164)
T 2pfi_A 16 EHFMNHSI--TTLAKDTPLEEVVKVVTSTDVTEYPLVEST-ESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILAR 92 (164)
T ss_dssp HHHCBCCC--CCEETTCBHHHHHHHHHTCCCSEEEEESCT-TTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHT
T ss_pred HHHcCCCC--eEECCCCcHHHHHHHHHhCCCCceeEEecC-CCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcc
Confidence 34677777 899999999999999998 76 9999830 158999999999996321 1 23578999987
Q ss_pred CCC------ceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 173 CSS------NVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 173 ~~~------~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
+ ++++.+++++.+++++|.+++++.+||+|+|+++|+||++||++...
T Consensus 93 --~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 93 --GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp --TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred --cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHH
Confidence 5 78999999999999999999999999999999999999999998754
No 78
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.41 E-value=7.8e-13 Score=129.53 Aligned_cols=112 Identities=10% Similarity=0.068 Sum_probs=98.4
Q ss_pred cCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccc------ccc--------------
Q 010640 104 RRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWE------NLS-------------- 160 (505)
Q Consensus 104 ~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~------~~~-------------- 160 (505)
..++|..++ +++++++++.++.+.|.+ ++ +||+|+ +++++|+||.+|+. ...
T Consensus 128 v~~~m~~~~--~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 202 (282)
T 2yzq_A 128 IEPYYQRYV--SIVWEGTPLKAALKALLLSNSMALPVVDS---EGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWI 202 (282)
T ss_dssp STTTSBSCC--CCEETTSBHHHHHHHHHTCSSSEEEEECT---TSCEEEEEEGGGGGGCGGGCC----------------
T ss_pred HHHHhCCCC--EEECCCCCHHHHHHHHHHcCCcEEEEEcC---CCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhh
Confidence 446777777 899999999999999998 66 999997 88999999999986 211
Q ss_pred ---------------ccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 161 ---------------DNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 161 ---------------~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
....++.++|++ +++++.+++++.+++++|.+++++++||+|+ |+++|+||++|+++...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 203 LESHPTLLFEKFELQLPNKPVAEIMTR--DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp ----------------CCCBGGGTCBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGC
T ss_pred cccchHHHHhHhhhhhccCCHHHhcCC--CCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHH
Confidence 024679999998 9999999999999999999999999999999 89999999999999764
No 79
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.40 E-value=3.6e-13 Score=130.21 Aligned_cols=116 Identities=11% Similarity=0.090 Sum_probs=96.4
Q ss_pred hccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc--------c---------
Q 010640 102 KSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS--------D--------- 161 (505)
Q Consensus 102 ~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~--------~--------- 161 (505)
..+.++|..++ +++.+++++.++.++|.+ ++ +||||++ .+++|+|+||.+||.... .
T Consensus 13 ~~v~diMt~~v--vtv~~~~tv~~~~~lm~~~~~~~~PVVd~~-~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~ 89 (250)
T 2d4z_A 13 IQVGDIMVRDV--TSIASTSTYGDLLHVLRQTKLKFFPFVDTP-DTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEAD 89 (250)
T ss_dssp CBTTSSSBSSC--CCEETTCBHHHHHHHHHHCCCSEEEEESCT-TTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBC
T ss_pred CChHHhcCCCC--eEECCCCCHHHHHHHHHhcCCCEEEEEecC-CCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccc
Confidence 35668999988 999999999999999998 77 9999861 126899999999985210 0
Q ss_pred --------------------------------------------------------------------------------
Q 010640 162 -------------------------------------------------------------------------------- 161 (505)
Q Consensus 162 -------------------------------------------------------------------------------- 161 (505)
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (250)
T 2d4z_A 90 EEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEE 169 (250)
T ss_dssp CC---------------------------------------------------------------------------CCS
T ss_pred ccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccccc
Confidence
Q ss_pred --------------ccccc--c-cccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 162 --------------NKVKI--F-DYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 162 --------------~~~~v--~-~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
...++ . .+|.+ .++++.+++++.++..+|...+++++||+++|+|+||||++||++++.
T Consensus 170 ~i~~~~~~~~~~~~l~~~Vdl~~~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 170 MLTLEEIYRWEQREKNVVVNFETCRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CCBHHHHHHHHHHHTTCBCCTTSSCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred ccChhhhhhHHHHhcCceeccccccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHHHHHH
Confidence 00111 1 36888 899999999999999999999999999998899999999999999875
No 80
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.40 E-value=6.1e-12 Score=125.64 Aligned_cols=170 Identities=18% Similarity=0.225 Sum_probs=118.6
Q ss_pred ccHHHHHHHHHH-cCccEEEEeCCCC-----------CchhHHHHHHHHHHhCCCceEEEc---ccCC-HHHHHHHHHcC
Q 010640 247 ESDKERLEHLVK-AGVNVVVLDSSQG-----------NSSFQIEMIKYAKKTYPELDVIGG---NVVT-MYQAQNLIEAG 310 (505)
Q Consensus 247 ~~~~e~~~~lie-aGad~I~i~~~~g-----------~~~~~~~~i~~l~~~~~~~~Vi~g---~V~t-~e~a~~l~~aG 310 (505)
++..+.++.+.+ +|+|.+.++..+. ....+.+.++.+++.. ++||+++ ++.+ .+.++.+.++|
T Consensus 111 ~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G 189 (311)
T 1ep3_A 111 ADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAG 189 (311)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCChHHHHHHHHHHHHcC
Confidence 345555666666 8999999976532 1234578888888886 7888885 3334 55689999999
Q ss_pred CCEEEEccCCcce--ee-ccc------ccccCcChH--HHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 311 VDGLRVGMGSGSI--CT-TQE------VCAVGRGQA--TAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 311 ad~I~v~~g~g~~--~~-~~~------~~g~g~p~~--~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
+|+|.+.+...+. .. ++. ..++..+.. ..+..+.+..+..++|||++|||.++.|+.+++++|||+|++
T Consensus 190 ~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 190 ADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAV 269 (311)
T ss_dssp CSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 9999996422111 10 110 011111211 123344444455689999999999999999999999999999
Q ss_pred cccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHh
Q 010640 380 GSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGF 459 (505)
Q Consensus 380 G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m 459 (505)
|+.|+.. ..++.++..+++..|
T Consensus 270 g~~~l~~----------------------------------------------------------p~~~~~i~~~l~~~~ 291 (311)
T 1ep3_A 270 GTANFAD----------------------------------------------------------PFVCPKIIDKLPELM 291 (311)
T ss_dssp CTHHHHC----------------------------------------------------------TTHHHHHHHHHHHHH
T ss_pred CHHHHcC----------------------------------------------------------cHHHHHHHHHHHHHH
Confidence 9998531 034567889999999
Q ss_pred hccCCCCHHHHHHhhh
Q 010640 460 QDLGASSLQSAHDLLR 475 (505)
Q Consensus 460 ~~~G~~~~~~l~~~~~ 475 (505)
...|+++++||+..+.
T Consensus 292 ~~~g~~~~~~~~g~~~ 307 (311)
T 1ep3_A 292 DQYRIESLESLIQEVK 307 (311)
T ss_dssp HHTTCSCHHHHHHHHH
T ss_pred HHcCCCCHHHHhChhc
Confidence 9999999999998753
No 81
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.38 E-value=1.2e-12 Score=128.79 Aligned_cols=110 Identities=15% Similarity=0.233 Sum_probs=97.9
Q ss_pred CCccccCCCeeEeCCCCCHHHHHHHhcC-C-----e--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCc
Q 010640 105 RVPIFSSSLDVFKAPDGCINDANDFDGS-N-----Y--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSN 176 (505)
Q Consensus 105 ~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~-----~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~ 176 (505)
.++|..++ +++++++|+.++++.|.+ + + +||+|+ +++++|+||.+|+... ....++.++|++ ++
T Consensus 138 ~~iM~~~~--~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~~lvGivt~~dll~~-~~~~~v~~im~~--~~ 209 (278)
T 2yvy_A 138 GGLMTPEY--VAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KGRLKGVLSLRDLIVA-DPRTRVAEIMNP--KV 209 (278)
T ss_dssp GGTCBSCC--CEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TCBEEEEEEHHHHHHS-CTTCBSTTTSBS--SC
T ss_pred HhhcCCCc--eEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CCCEEEEEEHHHHhcC-CCCCcHHHHhCC--CC
Confidence 35787777 999999999999999875 2 3 999997 8999999999999643 346789999988 99
Q ss_pred eEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 177 VSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 177 ~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+++++++++.+++++|.++++..+||||+ |+++|+||.+|+++...
T Consensus 210 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 210 VYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-
T ss_pred eEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHH
Confidence 99999999999999999999999999998 99999999999999864
No 82
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.38 E-value=1.1e-12 Score=138.46 Aligned_cols=122 Identities=15% Similarity=0.200 Sum_probs=105.8
Q ss_pred HHHHHHHhhhccC-----CccccCCCeeEeCCCCCHHHHHHHhcC-C-----e--EEEEeCCCCCCeEEEEEeccccccc
Q 010640 93 DQARLVVSAKSRR-----VPIFSSSLDVFKAPDGCINDANDFDGS-N-----Y--VFVTESGTRRSRILGYVTKSDWENL 159 (505)
Q Consensus 93 ~~~~~v~~v~~~~-----~~~~~~p~~~~v~~~~tv~~a~~~~~~-~-----~--~pVvd~~~~~g~lvGivt~~Dl~~~ 159 (505)
+++..++++.++. ++|..++ +++++++|+.++++.|++ + + +||+|+ +++++|+||.+|+...
T Consensus 141 ~~~~~i~~~l~~~~~~v~~iM~~~~--v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 141 RTRAEVEALARYEEDEAGGLMTPEY--VAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KGRLKGVLSLRDLIVA 215 (473)
T ss_dssp HHHHHHHHHHTSCTTBSTTTCBSCE--EEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TSBEEEEEEHHHHHHS
T ss_pred HHHHHHHHHhcCCCCCHHHhCCCCc--eEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CCcEEEEEEHHHHhcC
Confidence 4455666665554 5788777 999999999999999976 3 3 999997 8999999999999643
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 160 SDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 160 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..+.++.++|++ +++++++++++.++++.|.++++..+||||+ |+++|+||.+|+++...
T Consensus 216 -~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 216 -DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp -CTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -CCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHH
Confidence 356789999998 9999999999999999999999999999998 99999999999998754
No 83
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.38 E-value=1.3e-12 Score=129.20 Aligned_cols=120 Identities=16% Similarity=0.166 Sum_probs=102.5
Q ss_pred HHHHHhhhccC-----CccccCCCeeEeCCCCCHHHHHHHhcC-C-----e--EEEEeCCCCCCeEEEEEeccccccccc
Q 010640 95 ARLVVSAKSRR-----VPIFSSSLDVFKAPDGCINDANDFDGS-N-----Y--VFVTESGTRRSRILGYVTKSDWENLSD 161 (505)
Q Consensus 95 ~~~v~~v~~~~-----~~~~~~p~~~~v~~~~tv~~a~~~~~~-~-----~--~pVvd~~~~~g~lvGivt~~Dl~~~~~ 161 (505)
+..++++..+. ++|.+++ +++++++|+.++++.|.+ + + +||+|+ +++++|+||.+|+... .
T Consensus 125 ~~~i~~ll~~~~~~v~~iM~~~~--~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~~lvGivt~~dll~~-~ 198 (286)
T 2oux_A 125 AGEIKELLHYEDETAGAIMTTEF--VSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---ENHLVGVISLRDLIVN-D 198 (286)
T ss_dssp HHHHHHHTTSCTTBHHHHCBSCC--CEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TCBEEEEEEHHHHTTS-C
T ss_pred HHHHHHHhcCChHHHHHhCCCCc--eEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CCeEEEEEEHHHHHcC-C
Confidence 34445544443 4777777 999999999999999875 2 2 999997 8999999999999643 3
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
...++.++|++ +++++++++++.+++++|.++++..+||||+ |+++|+||..|+++...
T Consensus 199 ~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 199 DDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp TTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 46789999998 9999999999999999999999999999998 99999999999998754
No 84
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.36 E-value=2.7e-12 Score=158.32 Aligned_cols=137 Identities=12% Similarity=0.206 Sum_probs=94.7
Q ss_pred HHHHHHHHHcC--ccEEEEeCCCCCc--hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCC------EEEEc-c
Q 010640 250 KERLEHLVKAG--VNVVVLDSSQGNS--SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVD------GLRVG-M 318 (505)
Q Consensus 250 ~e~~~~lieaG--ad~I~i~~~~g~~--~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad------~I~v~-~ 318 (505)
.+.++.+++.| +|.+.+.. |.+ +...++++.+++. ++.++.=.+.+.+.++++.+.|+| +|++. .
T Consensus 504 ~~~~~~~~~~g~~vdgv~~~a--G~P~~ee~~~~i~~l~~~--Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~ 579 (3089)
T 3zen_D 504 KRLVQRARQSGAPIDGLVVSA--GIPDLEEAVDIIDELNEV--GISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGG 579 (3089)
T ss_dssp HHHHHHHHHTTCSCCEEEEES--SCCCHHHHHHHHTSTTHH--HHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCS
T ss_pred HHHHHHHHHcCCCceEEEEeC--CCCchhHhHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCC
Confidence 35677888889 56677643 443 2233455555554 444443257789999999999999 67664 4
Q ss_pred CCcceeecccccccCcChHHHHHHHH-HHHhhcCCcEEecCCCCCHHHHHHHH-----------HhCCCEEEecccccCC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVS-SIAAQSGVPVIADGGISNSGHIVKAL-----------VLGASTVMMGSFLAGS 386 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~-~~~~~~~ipvIa~GGI~~~~di~kal-----------~lGA~~V~~G~~f~~~ 386 (505)
.+|++.... +....+.... +..+..++|||++|||.++++++.++ ++|||+|+|||+|+.|
T Consensus 580 eaGGH~g~~-------~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 580 RAGGHHSWE-------DLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp SSSEECCSC-------CHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred CcCCCCCcc-------cHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhC
Confidence 444443321 2233332222 22333579999999999999999999 9999999999999999
Q ss_pred CCCCccceeec
Q 010640 387 TEAPGAYVYQN 397 (505)
Q Consensus 387 ~Es~~~~~~~~ 397 (505)
.||..+..+++
T Consensus 653 ~Ea~~s~~~K~ 663 (3089)
T 3zen_D 653 LEATTSPQVKQ 663 (3089)
T ss_dssp TTSCBCHHHHH
T ss_pred cccCCCHHHHH
Confidence 99998877663
No 85
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.36 E-value=1.4e-12 Score=130.61 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=97.4
Q ss_pred cccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc------ccccccccccccCC----
Q 010640 108 IFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS------DNKVKIFDYMRDCS---- 174 (505)
Q Consensus 108 ~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~------~~~~~v~~im~~~~---- 174 (505)
|..++ +++++++++.++.+.|.+ ++ +||+|+ +|+++|+||.+|+.... ....++.++|++..
T Consensus 196 m~~~~--~~v~~~~~~~~~~~~m~~~~~~~~pVvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~ 270 (323)
T 3t4n_C 196 TQDNM--KSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFE 270 (323)
T ss_dssp BCTTC--CCBCTTSBHHHHHHHHHHHTCSEEEEECT---TCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGGSCTTCC
T ss_pred CCCCc--EEECCCCcHHHHHHHHHHcCCCEEEEECC---CCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhhccccCC
Confidence 66777 899999999999999998 76 999997 89999999999996321 23568999998744
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+++++.+++++.+++++|.+++++++||+|+ |+++|+||++||++...
T Consensus 271 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~ 319 (323)
T 3t4n_C 271 GVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 319 (323)
T ss_dssp CCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 6899999999999999999999999999998 99999999999999864
No 86
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.35 E-value=8.7e-13 Score=128.81 Aligned_cols=111 Identities=17% Similarity=0.264 Sum_probs=97.7
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccc----------------cc
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSD----------------NK 163 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~----------------~~ 163 (505)
...+.|..++ +++++++++.++++.|.+ ++ +||++ +|+++|+||.+|+..... ..
T Consensus 149 ~v~~~m~~~~--~~v~~~~~l~~~~~~~~~~~~~~~~Vv~----~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 222 (280)
T 3kh5_A 149 VIDDYITRDV--IVATPGERLKDVARTMVRNGFRRLPVVS----EGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITN 222 (280)
T ss_dssp BSGGGCBCSC--CCBCTTCBHHHHHHHHHHHTCSEEEEEE----TTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHH
T ss_pred CHHHHhCCCC--eEECCCCcHHHHHHHHHHcCCCEEEEEE----CCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhC
Confidence 3456777777 899999999999999998 76 99994 799999999999862211 35
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
.++.++|++ +++++++++++.++++.|.+++++++||+|+ |+++|+||++||++..
T Consensus 223 ~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 223 VRMEEIMKR--DVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp CBHHHHSBS--SCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred CcHHHHhcC--CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 689999998 9999999999999999999999999999999 8999999999999874
No 87
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.35 E-value=4e-12 Score=127.10 Aligned_cols=170 Identities=15% Similarity=0.182 Sum_probs=120.5
Q ss_pred CccHHHHHHHHHHcCcc-EEEEeCCCC----------CchhHHHHHHHHHHhCCCceEEEcccC--CHHH----HHHHHH
Q 010640 246 RESDKERLEHLVKAGVN-VVVLDSSQG----------NSSFQIEMIKYAKKTYPELDVIGGNVV--TMYQ----AQNLIE 308 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad-~I~i~~~~g----------~~~~~~~~i~~l~~~~~~~~Vi~g~V~--t~e~----a~~l~~ 308 (505)
.+++.+.++.+.++|+| ++.++.++. ......+.++++++.. ++||+++-.. +.++ ++.+.+
T Consensus 105 ~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 105 AAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 35677788888899999 999987532 2234567788888776 7899886332 3333 678888
Q ss_pred cCCCEEEEccCCcc---eeec-c--------ccccc-CcC-hHHHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHh
Q 010640 309 AGVDGLRVGMGSGS---ICTT-Q--------EVCAV-GRG-QATAVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVL 372 (505)
Q Consensus 309 aGad~I~v~~g~g~---~~~~-~--------~~~g~-g~p-~~~~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~l 372 (505)
+|+|+|.+.+..+. +... + ...|+ |.+ ...++..+.+..+.. ++|||+.|||.++.|+.+++++
T Consensus 184 ~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~ 263 (311)
T 1jub_A 184 FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLC 263 (311)
T ss_dssp SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHH
T ss_pred cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHc
Confidence 99999998754211 1100 0 01111 211 122344555555556 7999999999999999999999
Q ss_pred CCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHH
Q 010640 373 GASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTM 452 (505)
Q Consensus 373 GA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 452 (505)
|||+|++||.|+. +| + .+++++.
T Consensus 264 GAd~V~vg~~~l~----------------------------------------------~~---------p--~~~~~i~ 286 (311)
T 1jub_A 264 GATMLQIGTALHK----------------------------------------------EG---------P--AIFDRII 286 (311)
T ss_dssp TCSEEEECHHHHH----------------------------------------------HC---------T--HHHHHHH
T ss_pred CCCEEEEchHHHh----------------------------------------------cC---------c--HHHHHHH
Confidence 9999999999852 01 1 4667899
Q ss_pred HHHHHHhhccCCCCHHHHHHh
Q 010640 453 QAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 453 ~~l~~~m~~~G~~~~~~l~~~ 473 (505)
++|+..|...|+++++||+..
T Consensus 287 ~~l~~~l~~~g~~si~e~~g~ 307 (311)
T 1jub_A 287 KELEEIMNQKGYQSIADFHGK 307 (311)
T ss_dssp HHHHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHHHcCCCCHHHHhCh
Confidence 999999999999999999865
No 88
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.33 E-value=4.6e-12 Score=125.15 Aligned_cols=113 Identities=13% Similarity=0.087 Sum_probs=100.8
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc---ccccccccccccCCCc
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS---DNKVKIFDYMRDCSSN 176 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~---~~~~~v~~im~~~~~~ 176 (505)
...++|..++ +++++++++.++++.|.+ ++ +||+|+ +++++|++|.+|+.... ....++.++|++ ++
T Consensus 94 ~v~~im~~~~--~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~--~~ 166 (296)
T 3ddj_A 94 PIIDYMTPNP--VTVYNTSDEFTAINIMVTRNFGSLPVVDI---NDKPVGIVTEREFLLLYKDLDEIFPVKVFMST--KV 166 (296)
T ss_dssp BGGGTSEESC--CCEETTSCHHHHHHHHHHHTCSEEEEECT---TSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBC--SC
T ss_pred cHHHhccCCC--EEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CCcEEEEEeHHHHHHhhhcccccccHHHhhcC--CC
Confidence 4566888888 899999999999999998 76 999987 89999999999986322 235689999998 99
Q ss_pred eEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 177 VSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 177 ~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+++.+++++.++++.|.+++.+.+||+|+ |+++|+||.+|+++...
T Consensus 167 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 167 QTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 99999999999999999999999999998 99999999999988754
No 89
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.33 E-value=7.9e-13 Score=130.71 Aligned_cols=110 Identities=10% Similarity=0.038 Sum_probs=98.0
Q ss_pred CccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-----------ccccccccccc
Q 010640 106 VPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS-----------DNKVKIFDYMR 171 (505)
Q Consensus 106 ~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~-----------~~~~~v~~im~ 171 (505)
++|..++ +++++++++.++++.|.+ ++ +||+|+ +|+++|+||.+|+.... ....++.++|+
T Consensus 160 ~~m~~~~--~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~ 234 (296)
T 3ddj_A 160 VFMSTKV--QTIYKEVRLDQAVKLMLRRGFRRLPVIDD---DNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMV 234 (296)
T ss_dssp HHSBCSC--CCEETTSBHHHHHHHHHHHTCSEEEEECT---TSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSB
T ss_pred HhhcCCC--eEECCCCCHHHHHHHHHHcCCCEEEEEcC---CCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhC
Confidence 3566677 899999999999999998 76 999998 89999999999996221 13568999999
Q ss_pred cCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 172 DCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 172 ~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+ +++++.+++++.+++++|.+++++++||+|+ |+++|+||++||++...
T Consensus 235 ~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~ 284 (296)
T 3ddj_A 235 T--NLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALH 284 (296)
T ss_dssp C--CCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred C--CCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHH
Confidence 8 9999999999999999999999999999997 99999999999999864
No 90
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.33 E-value=4e-12 Score=127.29 Aligned_cols=171 Identities=17% Similarity=0.144 Sum_probs=120.8
Q ss_pred CccHHHHHHHHHHcCcc---EEEEeCCCC----------CchhHHHHHHHHHHhCCCceEEEccc--CCHHH----HHHH
Q 010640 246 RESDKERLEHLVKAGVN---VVVLDSSQG----------NSSFQIEMIKYAKKTYPELDVIGGNV--VTMYQ----AQNL 306 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad---~I~i~~~~g----------~~~~~~~~i~~l~~~~~~~~Vi~g~V--~t~e~----a~~l 306 (505)
.+++.+.++.+.++|+| +++++.++. ......+.++++++.. +.||++|-. .+.++ ++.+
T Consensus 105 ~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~ 183 (314)
T 2e6f_A 105 VEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVL 183 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHH
Confidence 35577778888888999 999987532 2234577888888876 788888633 25555 7888
Q ss_pred HHcC-CCEEEEccCCcc---eee--c-------cccccc-CcC-hHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHH
Q 010640 307 IEAG-VDGLRVGMGSGS---ICT--T-------QEVCAV-GRG-QATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKAL 370 (505)
Q Consensus 307 ~~aG-ad~I~v~~g~g~---~~~--~-------~~~~g~-g~p-~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal 370 (505)
.++| +|+|.+.+..+. +.. . ....|+ |.+ ...++..+.+..+.. ++|||+.|||.++.|+.+++
T Consensus 184 ~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l 263 (314)
T 2e6f_A 184 NEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHI 263 (314)
T ss_dssp HTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH
T ss_pred HhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHH
Confidence 8999 999998754321 110 0 011111 111 112334444444455 79999999999999999999
Q ss_pred HhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHH
Q 010640 371 VLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPY 450 (505)
Q Consensus 371 ~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (505)
++|||+|++|+.|+. +| + .++++
T Consensus 264 ~~GAd~V~ig~~~l~----------------------------------------------~~---------p--~~~~~ 286 (314)
T 2e6f_A 264 LAGASMVQVGTALQE----------------------------------------------EG---------P--GIFTR 286 (314)
T ss_dssp HHTCSSEEECHHHHH----------------------------------------------HC---------T--THHHH
T ss_pred HcCCCEEEEchhhHh----------------------------------------------cC---------c--HHHHH
Confidence 999999999998852 01 1 46678
Q ss_pred HHHHHHHHhhccCCCCHHHHHHhh
Q 010640 451 TMQAVKQGFQDLGASSLQSAHDLL 474 (505)
Q Consensus 451 l~~~l~~~m~~~G~~~~~~l~~~~ 474 (505)
+.++|+..|...|+++++||+.++
T Consensus 287 i~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 287 LEDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHHHHHHHHHHHTCCSSTTTTTCC
T ss_pred HHHHHHHHHHHcCCCCHHHHhchH
Confidence 999999999999999999998763
No 91
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.31 E-value=8.2e-12 Score=121.86 Aligned_cols=152 Identities=16% Similarity=0.145 Sum_probs=112.6
Q ss_pred ccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-------------------cccc
Q 010640 107 PIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS-------------------DNKV 164 (505)
Q Consensus 107 ~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~-------------------~~~~ 164 (505)
+|..++ +++++++|+.+|+++|.+ ++ +||+|++ +++++|++|.+|+.... ..+.
T Consensus 9 i~~~~~--~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~--~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T 3kh5_A 9 AQNKKI--VTVYPTTTIRKALMTMNENKYRRLPVVNAG--NNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINE 84 (280)
T ss_dssp SCCSCC--CCBCTTSBHHHHHHHHHHHCCCEEEEECTT--TCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTS
T ss_pred hcCCCc--EEECCCCcHHHHHHHHHhCCCcEeeEEECC--CCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhh
Confidence 555667 899999999999999999 77 9999852 58999999999986211 1145
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCC-CccCC-CCcceEEE
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGK-GTVGP-DGKWMVGA 241 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~-~~~d~-~~~l~v~a 241 (505)
++.++|++ +++++++++++.++++.|.+++.+.+||+|+ |+++|++|.+|+++......... ...+. .... +
T Consensus 85 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~-~-- 159 (280)
T 3kh5_A 85 PVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRDV-I-- 159 (280)
T ss_dssp BGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSC-C--
T ss_pred hHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCC-e--
Confidence 89999998 9999999999999999999999999999998 99999999999998754221100 01110 0000 0
Q ss_pred eecCCccHHHHHHHHHHcCccEEEEe
Q 010640 242 AIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 242 ~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
.+.......+.++.+.+.+...+.+.
T Consensus 160 ~v~~~~~l~~~~~~~~~~~~~~~~Vv 185 (280)
T 3kh5_A 160 VATPGERLKDVARTMVRNGFRRLPVV 185 (280)
T ss_dssp CBCTTCBHHHHHHHHHHHTCSEEEEE
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 11222345666677777777766554
No 92
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.28 E-value=6.5e-12 Score=126.31 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=97.4
Q ss_pred ccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc------cccccccccccccC----
Q 010640 107 PIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL------SDNKVKIFDYMRDC---- 173 (505)
Q Consensus 107 ~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~------~~~~~~v~~im~~~---- 173 (505)
+|..++ +++++++++.++++.|.+ ++ +||+|+ +|+++|+||.+|+... .....++.++|++.
T Consensus 190 ~m~~~~--~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~ 264 (334)
T 2qrd_G 190 GTWSNL--ATASMETKVYDVIKMLAEKNISAVPIVNS---EGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANF 264 (334)
T ss_dssp SBCSSC--CCBCTTSBHHHHHHHHHHHTCSEEEEECT---TCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCTTC
T ss_pred cccCCc--eEECCCCcHHHHHHHHHHcCCcEEEEEcC---CCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcccccC
Confidence 466677 899999999999999988 66 999997 8999999999999631 12356899999831
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 174 SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 174 ~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
.+++++.+++++.+++++|.+++++++||+|+ |+++|+||++||++....
T Consensus 265 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 265 DGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHS
T ss_pred CCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHh
Confidence 27899999999999999999999999999998 999999999999998754
No 93
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.27 E-value=1.4e-11 Score=120.46 Aligned_cols=151 Identities=13% Similarity=0.065 Sum_probs=97.8
Q ss_pred CccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCC
Q 010640 106 VPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPAN 182 (505)
Q Consensus 106 ~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 182 (505)
++|..++ +++++++|+.+|+++|.+ ++ +||+|+ +|+++|++|.+|+.... .+.++.++|.+ ++++++++
T Consensus 5 ~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~pV~d~---~~~~~Giv~~~dl~~~~-~~~~v~~~m~~--~~~~v~~~ 76 (282)
T 2yzq_A 5 TIMTQNP--VTITLPATRNYALELFKKYKVRSFPVVNK---EGKLVGIISVKRILVNP-DEEQLAMLVKR--DVPVVKEN 76 (282)
T ss_dssp HHSEESC--CCEESSCC------------CCEEEEECT---TCCEEEEEESSCC-----------CCCBS--CCCEEETT
T ss_pred HhccCCC--eEECCCCcHHHHHHHHHHcCCCeEEEEcC---CCcEEEEEEHHHHHhhh-ccCCHHHHcCC--CCcEECCC
Confidence 4566677 899999999999999998 76 999997 89999999999996322 35679999998 89999999
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhh-hhcCCCC--CCCccCC-CCcceEEEeecCCccHHHHHHHHH
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVER-LKGYPNL--GKGTVGP-DGKWMVGAAIGTRESDKERLEHLV 257 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~-~~~~~~~--~~~~~d~-~~~l~v~a~i~~~~~~~e~~~~li 257 (505)
+++.++++.|.+++.+.+||+|+ |+++|+||.+|+++ ....... .....+. .... + .+.......+.++.+.
T Consensus 77 ~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~~~-~--~v~~~~~l~~~~~~~~ 153 (282)
T 2yzq_A 77 DTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQRYV-S--IVWEGTPLKAALKALL 153 (282)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBSCC-C--CEETTSBHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCCCC-E--EECCCCCHHHHHHHHH
Confidence 99999999999999999999998 99999999999998 5542100 0001110 0111 1 1112234566777777
Q ss_pred HcCccEEEEe
Q 010640 258 KAGVNVVVLD 267 (505)
Q Consensus 258 eaGad~I~i~ 267 (505)
+.+...+.+.
T Consensus 154 ~~~~~~l~Vv 163 (282)
T 2yzq_A 154 LSNSMALPVV 163 (282)
T ss_dssp TCSSSEEEEE
T ss_pred HcCCcEEEEE
Confidence 7788776554
No 94
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.23 E-value=5.4e-12 Score=135.21 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=98.1
Q ss_pred ccCCccccCCCeeEeCCC-CCHHHHHHHhcC-Ce--EEEEe-CCCCCCeEEEEEeccccccc-----ccccccccccccc
Q 010640 103 SRRVPIFSSSLDVFKAPD-GCINDANDFDGS-NY--VFVTE-SGTRRSRILGYVTKSDWENL-----SDNKVKIFDYMRD 172 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~-~tv~~a~~~~~~-~~--~pVvd-~~~~~g~lvGivt~~Dl~~~-----~~~~~~v~~im~~ 172 (505)
++.++|..++ ++++++ +|+.+++++|.+ ++ +||+| + +++++|+||.+||+.. .....++.++|++
T Consensus 385 ~V~diM~~~~--vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~---~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~ 459 (527)
T 3pc3_A 385 AIAELELPAP--PVILKSDATVGEAIALMKKHRVDQLPVVDQD---DGSVLGVVGQETLITQIVSMNRQQSDPAIKALNK 459 (527)
T ss_dssp BGGGGCCCCC--SCCEETTCBHHHHHHHHHHHTCSEEEEECTT---TCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEET
T ss_pred cHHHhCcCCC--eEEcCCCCcHHHHHHHHHHcCCCeEEEEECC---CCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcC
Confidence 3456888888 999999 999999999999 77 99999 6 8999999999999621 1346789999998
Q ss_pred CCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-----CeeeeEEeechhhhhhcC
Q 010640 173 CSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-----GERLDVVTREDVERLKGY 223 (505)
Q Consensus 173 ~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-----g~l~GiIt~~dil~~~~~ 223 (505)
+++++++++++.+++++|.++++ +||||+ |+++||||++||++.+..
T Consensus 460 --~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 460 --RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp --TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred --CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999987765 799987 899999999999998864
No 95
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.23 E-value=1.8e-10 Score=132.72 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=118.3
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCC--------------chhHHHHHHHHHHhCCCceEEEcccC---C-HHHHHHHH
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGN--------------SSFQIEMIKYAKKTYPELDVIGGNVV---T-MYQAQNLI 307 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~--------------~~~~~~~i~~l~~~~~~~~Vi~g~V~---t-~e~a~~l~ 307 (505)
.+++.+.++.+.++|+|+|.++.+..+ ...+.+.++++++.. ++||++|-.. + .+.++.+.
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~~~~~~~a~~~~ 725 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTPNVTDIVSIARAAK 725 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCCChHHHHHHHHHHH
Confidence 345667777777899999999865321 234677888888887 7899986443 2 45689999
Q ss_pred HcCCCEEEEccCCcce-----------e---ec-ccccccCcChH--HHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHH
Q 010640 308 EAGVDGLRVGMGSGSI-----------C---TT-QEVCAVGRGQA--TAVYKVSSIAAQS-GVPVIADGGISNSGHIVKA 369 (505)
Q Consensus 308 ~aGad~I~v~~g~g~~-----------~---~~-~~~~g~g~p~~--~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~ka 369 (505)
++|+|+|.+.+...+. . .. ....++..+.. .++..+.+..+.. ++|||++|||.++.|+.++
T Consensus 726 ~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~ 805 (1025)
T 1gte_A 726 EGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQF 805 (1025)
T ss_dssp HHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHH
T ss_pred HcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHH
Confidence 9999999996421100 0 00 01111111211 1233344444445 6999999999999999999
Q ss_pred HHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHH
Q 010640 370 LVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIP 449 (505)
Q Consensus 370 l~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 449 (505)
|++||++|++|++|+. + + ..+++
T Consensus 806 l~~Ga~~v~vg~~~l~-------------------~---------------------------~-----------~~~~~ 828 (1025)
T 1gte_A 806 LHSGASVLQVCSAVQN-------------------Q---------------------------D-----------FTVIQ 828 (1025)
T ss_dssp HHTTCSEEEESHHHHT-------------------S---------------------------C-----------TTHHH
T ss_pred HHcCCCEEEEeecccc-------------------C---------------------------C-----------ccHHH
Confidence 9999999999998852 0 0 14566
Q ss_pred HHHHHHHHHhhccCCCCHHHHHH
Q 010640 450 YTMQAVKQGFQDLGASSLQSAHD 472 (505)
Q Consensus 450 ~l~~~l~~~m~~~G~~~~~~l~~ 472 (505)
.+..+|+..|...|++++.+|+.
T Consensus 829 ~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 829 DYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp HHHHHHHHHHHHTTCGGGTTSBT
T ss_pred HHHHHHHHHHHHcCCCCHHHHhC
Confidence 89999999999999999999875
No 96
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.22 E-value=2.3e-11 Score=122.12 Aligned_cols=107 Identities=14% Similarity=0.095 Sum_probs=94.4
Q ss_pred cCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccc------cccccccccc------cCC
Q 010640 110 SSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSD------NKVKIFDYMR------DCS 174 (505)
Q Consensus 110 ~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~------~~~~v~~im~------~~~ 174 (505)
.++ +++++++++.++++.|.+ ++ +||+|+ +|+++|+||.+|+..... ...++.++|. +
T Consensus 201 ~~~--~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 273 (330)
T 2v8q_E 201 ANI--AMVRTTTPVYVALGIFVQHRVSALPVVDE---KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE-- 273 (330)
T ss_dssp SSC--CCEETTCBHHHHHHHHHHHCCSEEEEECT---TSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCC--
T ss_pred CCc--eEECCCCCHHHHHHHHHHcCCCeEEEECC---CCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccC--
Confidence 456 889999999999999988 76 999997 899999999999973221 2467888884 5
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
+++++.+++++.+++++|.+++++++||+|+ |+++|+||++||++....
T Consensus 274 ~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 274 GVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp SCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHS
T ss_pred CCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 8999999999999999999999999999998 999999999999998754
No 97
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.19 E-value=3.7e-11 Score=120.17 Aligned_cols=117 Identities=14% Similarity=0.019 Sum_probs=95.9
Q ss_pred HhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCe-----EEEEEeccccccc--------ccc
Q 010640 99 VSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSR-----ILGYVTKSDWENL--------SDN 162 (505)
Q Consensus 99 ~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~-----lvGivt~~Dl~~~--------~~~ 162 (505)
..+.+..+.|..++ +++++++++.++++.|.+ ++ +||+|+ +++ ++|+||.+|+... ...
T Consensus 111 ~~i~~~~~~~~~~~--v~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~ 185 (323)
T 3t4n_C 111 KDIERALGVDQLDT--ASIHPSRPLFEACLKMLESRSGRIPLIDQ---DEETHREIVVSVLTQYRILKFVALNCRETHFL 185 (323)
T ss_dssp HHHHHHTTC----C--CCBCTTSBHHHHHHHHHHHTCSEEEEEEE---CTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGC
T ss_pred HHHHHHhCCCCCCc--eEeCCCCcHHHHHHHHHhCCeeEEEEEec---CCCCCccceEEEecHHHHHHHHHhcCCchhhh
Confidence 33444445566677 899999999999999988 76 999997 553 9999999999621 123
Q ss_pred ccccccc---cccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDY---MRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~i---m~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++ |++ +++++.+++++.++++.|.+++++.+||+|+ |+++|+||.+|+++...
T Consensus 186 ~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 186 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp CSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHH
T ss_pred hCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHh
Confidence 4588999 887 9999999999999999999999999999998 99999999999998764
No 98
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.19 E-value=2.2e-10 Score=117.27 Aligned_cols=167 Identities=17% Similarity=0.145 Sum_probs=111.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCc---------hhHHHHHHHHHHhC-------------------CCce-EEEcccC-
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNS---------SFQIEMIKYAKKTY-------------------PELD-VIGGNVV- 298 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~---------~~~~~~i~~l~~~~-------------------~~~~-Vi~g~V~- 298 (505)
+.+.++.+.+ -+|+++++.++.+. ....+.++.+++.. ...| |++|--.
T Consensus 201 y~~~a~~l~~-~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd 279 (415)
T 3i65_A 201 LKYCINKIGR-YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPD 279 (415)
T ss_dssp HHHHHHHHGG-GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSC
T ss_pred HHHHHHHHHh-hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCC
Confidence 3344444433 49999999876442 23445556665531 2578 7786332
Q ss_pred -C----HHHHHHHHHcCCCEEEEccCCcc-eee---cccccccCcCh--HHHHHHHHHHHhhc--CCcEEecCCCCCHHH
Q 010640 299 -T----MYQAQNLIEAGVDGLRVGMGSGS-ICT---TQEVCAVGRGQ--ATAVYKVSSIAAQS--GVPVIADGGISNSGH 365 (505)
Q Consensus 299 -t----~e~a~~l~~aGad~I~v~~g~g~-~~~---~~~~~g~g~p~--~~~l~~v~~~~~~~--~ipvIa~GGI~~~~d 365 (505)
+ .+.|+.+.++|+|+|.+.+.... ... .....|...+. ..++..+++..+.. ++|||++|||.++.|
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eD 359 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 359 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH
Confidence 2 44678889999999999764321 000 00112221121 22344444444444 699999999999999
Q ss_pred HHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchh
Q 010640 366 IVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVL 445 (505)
Q Consensus 366 i~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 445 (505)
+.+++.+|||+||+||.|+. +| +
T Consensus 360 a~e~l~aGAd~VqIgra~l~----------------------------------------------~G---------P-- 382 (415)
T 3i65_A 360 ALEKIEAGASVCQLYSCLVF----------------------------------------------NG---------M-- 382 (415)
T ss_dssp HHHHHHHTEEEEEESHHHHH----------------------------------------------HG---------G--
T ss_pred HHHHHHcCCCEEEEcHHHHh----------------------------------------------cC---------H--
Confidence 99999999999999998741 11 1
Q ss_pred hHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 446 KFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 446 ~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
.++.++..+|+..|...|+++++|++..
T Consensus 383 ~~~~~i~~~L~~~l~~~G~~si~e~~G~ 410 (415)
T 3i65_A 383 KSAVQIKRELNHLLYQRGYYNLKEAIGR 410 (415)
T ss_dssp GHHHHHHHHHHHHHHHTTCSSSTTTTTT
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 4667899999999999999999999865
No 99
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.18 E-value=3.9e-10 Score=114.66 Aligned_cols=158 Identities=18% Similarity=0.176 Sum_probs=106.0
Q ss_pred cCccEEEEeCCCCCc---------hhHHHHHHHHHHh---C---CCceEEEcccC--C----HHHHHHHHHcCCCEEEEc
Q 010640 259 AGVNVVVLDSSQGNS---------SFQIEMIKYAKKT---Y---PELDVIGGNVV--T----MYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 259 aGad~I~i~~~~g~~---------~~~~~~i~~l~~~---~---~~~~Vi~g~V~--t----~e~a~~l~~aGad~I~v~ 317 (505)
..+|++.++.++.+. ..+.+.++.+++. . .++||++|--. + .+.|+.+.++|+|+|.+.
T Consensus 175 ~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 175 PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 458999999876542 2233455555442 1 26899887332 2 345788899999999986
Q ss_pred cCC-cceeec-----ccccccCcCh--HHHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCC
Q 010640 318 MGS-GSICTT-----QEVCAVGRGQ--ATAVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGST 387 (505)
Q Consensus 318 ~g~-g~~~~~-----~~~~g~g~p~--~~~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~ 387 (505)
+.. +..... ....|...+. ..++..+++..+.. ++|||+.|||.++.|+.+++.+|||+||+|+.|+.
T Consensus 255 ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~-- 332 (367)
T 3zwt_A 255 NTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTF-- 332 (367)
T ss_dssp CCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH--
T ss_pred CCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHh--
Confidence 432 110000 0111221121 12334444444445 69999999999999999999999999999998741
Q ss_pred CCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccCCCCH
Q 010640 388 EAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSL 467 (505)
Q Consensus 388 Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~ 467 (505)
+| + .++.++..+|+..|...|++++
T Consensus 333 --------------------------------------------~g---------P--~~~~~i~~~l~~~m~~~G~~~i 357 (367)
T 3zwt_A 333 --------------------------------------------WG---------P--PVVGKVKRELEALLKEQGFGGV 357 (367)
T ss_dssp --------------------------------------------HC---------T--HHHHHHHHHHHHHHHHTTCSSH
T ss_pred --------------------------------------------cC---------c--HHHHHHHHHHHHHHHHcCCCCH
Confidence 01 1 4567899999999999999999
Q ss_pred HHHHHh
Q 010640 468 QSAHDL 473 (505)
Q Consensus 468 ~~l~~~ 473 (505)
.|++.+
T Consensus 358 ~e~~G~ 363 (367)
T 3zwt_A 358 TDAIGA 363 (367)
T ss_dssp HHHTTG
T ss_pred HHhhCc
Confidence 999865
No 100
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.16 E-value=2.8e-10 Score=118.05 Aligned_cols=128 Identities=19% Similarity=0.176 Sum_probs=88.9
Q ss_pred Cce-EEEcccC--CHH----HHHHHHHcCCCEEEEccCCcce-ee---cccccccCcChH--HHHHHHHHHHhhc--CCc
Q 010640 289 ELD-VIGGNVV--TMY----QAQNLIEAGVDGLRVGMGSGSI-CT---TQEVCAVGRGQA--TAVYKVSSIAAQS--GVP 353 (505)
Q Consensus 289 ~~~-Vi~g~V~--t~e----~a~~l~~aGad~I~v~~g~g~~-~~---~~~~~g~g~p~~--~~l~~v~~~~~~~--~ip 353 (505)
+.| |++|--. +.+ .|+.+.++|+|+|.+.++...- .. .....|+..+.+ .++..+++..+.. ++|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 567 7776332 333 3888999999999998643210 00 001122211211 1334444444445 799
Q ss_pred EEecCCCCCHHHHHHHHHhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccc
Q 010640 354 VIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQG 433 (505)
Q Consensus 354 vIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g 433 (505)
||+.|||.++.|+.+++.+|||+||+||.|+. +|
T Consensus 376 VIg~GGI~s~~DA~e~l~aGAd~Vqigrall~----------------------------------------------~g 409 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKIEAGASVCQLYSCLVF----------------------------------------------NG 409 (443)
T ss_dssp EEEESSCCSHHHHHHHHHTTEEEEEESHHHHH----------------------------------------------HG
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh----------------------------------------------cC
Confidence 99999999999999999999999999999851 01
Q ss_pred eeeeeccCCchhhHHHHHHHHHHHHhhccCCCCHHHHHHh
Q 010640 434 VVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G~~~~~~l~~~ 473 (505)
+ .++..+..+|+..|...|+++++|++..
T Consensus 410 ---------P--~l~~~i~~~l~~~l~~~G~~si~e~~G~ 438 (443)
T 1tv5_A 410 ---------M--KSAVQIKRELNHLLYQRGYYNLKEAIGR 438 (443)
T ss_dssp ---------G--GHHHHHHHHHHHHHHHHTCSSSGGGTTT
T ss_pred ---------h--HHHHHHHHHHHHHHHHhCCCCHHHHhhh
Confidence 1 4667888999999999999999999865
No 101
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.15 E-value=2.1e-10 Score=115.78 Aligned_cols=171 Identities=16% Similarity=0.124 Sum_probs=115.6
Q ss_pred CccHHHHHHHHH---HcCccEEEEeCCCCC----------chhHHHHHHHHHHhCCCceEEEcccC--CHHH----HHHH
Q 010640 246 RESDKERLEHLV---KAGVNVVVLDSSQGN----------SSFQIEMIKYAKKTYPELDVIGGNVV--TMYQ----AQNL 306 (505)
Q Consensus 246 ~~~~~e~~~~li---eaGad~I~i~~~~g~----------~~~~~~~i~~l~~~~~~~~Vi~g~V~--t~e~----a~~l 306 (505)
.+++.+.++.+. +.|+|++.++.++.+ .....+.++.+++.. ++||.+|--. +.++ +..+
T Consensus 138 ~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~-~~PV~vKi~p~~d~~~~~~~a~~~ 216 (354)
T 4ef8_A 138 MRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAHFDAAAEIL 216 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh-CCCeEEEecCCCCHHHHHHHHHHH
Confidence 445666666666 568999999886532 244567778888876 7899887332 3322 3344
Q ss_pred HHcC-CCEEEEccCCcc---ee--e-------cccccccCcCh--HHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHH
Q 010640 307 IEAG-VDGLRVGMGSGS---IC--T-------TQEVCAVGRGQ--ATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKAL 370 (505)
Q Consensus 307 ~~aG-ad~I~v~~g~g~---~~--~-------~~~~~g~g~p~--~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal 370 (505)
.++| +|+|.+.+.-+. +. . .....|...+. ..++..+.+..+.. ++|||+.|||.++.|+.+++
T Consensus 217 ~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l 296 (354)
T 4ef8_A 217 NEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHV 296 (354)
T ss_dssp HTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHH
T ss_pred HhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHH
Confidence 4787 999987543210 00 0 01122222222 12344444444444 69999999999999999999
Q ss_pred HhCCCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHH
Q 010640 371 VLGASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPY 450 (505)
Q Consensus 371 ~lGA~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (505)
.+||++||+|+.++. +| + .++.+
T Consensus 297 ~aGAd~V~vgra~l~----------------------------------------------~G---------P--~~~~~ 319 (354)
T 4ef8_A 297 LAGASMVQVGTALQE----------------------------------------------EG---------P--SIFER 319 (354)
T ss_dssp HHTEEEEEECHHHHH----------------------------------------------HC---------T--THHHH
T ss_pred HcCCCEEEEhHHHHH----------------------------------------------hC---------H--HHHHH
Confidence 999999999998741 11 1 46678
Q ss_pred HHHHHHHHhhccCCCCHHHHHHhh
Q 010640 451 TMQAVKQGFQDLGASSLQSAHDLL 474 (505)
Q Consensus 451 l~~~l~~~m~~~G~~~~~~l~~~~ 474 (505)
+.++|+..|...|+++++||+.++
T Consensus 320 i~~~l~~~m~~~G~~si~el~G~~ 343 (354)
T 4ef8_A 320 LTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp HHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHH
Confidence 999999999999999999998774
No 102
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.14 E-value=4.5e-10 Score=106.86 Aligned_cols=125 Identities=17% Similarity=0.206 Sum_probs=94.4
Q ss_pred HHHHHHHHHHcCccEEEEeCCCC-CchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQG-NSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g-~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
..+.++.+.++|+|++.++.+.. .+....++++.+++. ++++++ ++.+.++++.+.++|+|+|.+.+.+-.. .+.
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~-~~~ 165 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMA-DCSTVNEGISCHQKGIEFIGTTLSGYTG-PIT 165 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSS-SCC
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEE-ecCCHHHHHHHHhCCCCEEEecCccCCC-CCc
Confidence 34567788999999999987753 345567788888776 677776 7899999999999999999654321100 000
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
...|.+..+.++.+ . ++|||+.|||.++.|+.+++.+||++|++|+.|..
T Consensus 166 ----~~~~~~~li~~l~~---~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 166 ----PVEPDLAMVTQLSH---A-GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp ----CSSCCHHHHHHHHT---T-TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred ----CCCCCHHHHHHHHH---c-CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 12355665655443 3 79999999999999999999999999999999863
No 103
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.14 E-value=2.8e-10 Score=114.59 Aligned_cols=171 Identities=15% Similarity=0.133 Sum_probs=114.0
Q ss_pred CCccHHHHHHHHHHcCcc-EEEEeCCCCC----------chhHHHHHHHHHHhCCCceEEEccc---CCHHHHHHHHHcC
Q 010640 245 TRESDKERLEHLVKAGVN-VVVLDSSQGN----------SSFQIEMIKYAKKTYPELDVIGGNV---VTMYQAQNLIEAG 310 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad-~I~i~~~~g~----------~~~~~~~i~~l~~~~~~~~Vi~g~V---~t~e~a~~l~~aG 310 (505)
..+++.+.++.+.+.+++ ++.++.++.+ .+.+.+.++.+++.. ++||.+|-- ...+.++.+..+|
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~~~~~~~a~~~~~ag 217 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPYFDIVHFDQAAAIFN 217 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHhC
Confidence 345566677777777876 9999876532 134556666666665 789988622 2355667777888
Q ss_pred CCEEEEc---cCCc---ceee-------cccccccCcChH--HHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhC
Q 010640 311 VDGLRVG---MGSG---SICT-------TQEVCAVGRGQA--TAVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLG 373 (505)
Q Consensus 311 ad~I~v~---~g~g---~~~~-------~~~~~g~g~p~~--~~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lG 373 (505)
+++|..- +.-| .+.. .....|...|.+ .++..+.+..+.. ++|||+.|||.++.|+.+++.+|
T Consensus 218 a~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aG 297 (345)
T 3oix_A 218 XYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCG 297 (345)
T ss_dssp TSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHT
T ss_pred CCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhC
Confidence 8766421 1000 0110 011122221222 2344555555555 69999999999999999999999
Q ss_pred CCEEEecccccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHH
Q 010640 374 ASTVMMGSFLAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQ 453 (505)
Q Consensus 374 A~~V~~G~~f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~ 453 (505)
||+||+||.|+. +| + .++.++..
T Consensus 298 Ad~V~igra~~~----------------------------------------------~g---------P--~~~~~i~~ 320 (345)
T 3oix_A 298 ASMVQIGTALHQ----------------------------------------------EG---------P--QIFKRITK 320 (345)
T ss_dssp CSEEEESHHHHH----------------------------------------------HC---------T--HHHHHHHH
T ss_pred CCEEEEChHHHh----------------------------------------------cC---------h--HHHHHHHH
Confidence 999999998641 01 1 46678999
Q ss_pred HHHHHhhccCCCCHHHHHHh
Q 010640 454 AVKQGFQDLGASSLQSAHDL 473 (505)
Q Consensus 454 ~l~~~m~~~G~~~~~~l~~~ 473 (505)
+|+..|...|+++++|++.+
T Consensus 321 ~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 321 ELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp HHHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHHcCCCCHHHHHhH
Confidence 99999999999999999865
No 104
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.11 E-value=9.9e-10 Score=104.77 Aligned_cols=124 Identities=16% Similarity=0.217 Sum_probs=93.9
Q ss_pred HHHHHHHHHHcCccEEEEeCCCC-CchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQG-NSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g-~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
..+.++.+.++|+|++.++.+.. .+....++++.+++. ++++++ ++.+.++++.+.++|+|+|.+.+.+-. ..++
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t-~~~~ 165 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMA-DCSSVDDGLACQRLGADIIGTTMSGYT-TPDT 165 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTSS-SSSC
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccCC-CCCC
Confidence 34567788999999999987653 344567788888776 677766 789999999999999999965432100 0001
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
...|.+..+.++++ . ++|||+.|||.++.|+.+++.+||++|++|+.|.
T Consensus 166 ----~~~~~~~~i~~l~~---~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 166 ----PEEPDLPLVKALHD---A-GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp ----CSSCCHHHHHHHHH---T-TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred ----CCCCCHHHHHHHHh---c-CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc
Confidence 12355666655544 3 7999999999999999999999999999999985
No 105
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.10 E-value=3.2e-10 Score=113.68 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=93.0
Q ss_pred CCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccccc-c----------cccccccc-
Q 010640 105 RVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLS-D----------NKVKIFDY- 169 (505)
Q Consensus 105 ~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~-~----------~~~~v~~i- 169 (505)
.++|..++ +++++++++.++++.|.+ ++ +||+|++ +|+++|+||.+|+.... . ...++.++
T Consensus 121 ~~im~~~~--~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~ 196 (330)
T 2v8q_E 121 LQDSFKPL--VCISPNASLFDAVSSLIRNKIHRLPVIDPE--SGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQ 196 (330)
T ss_dssp SSSSCCCC--CCBCTTSBHHHHHHHHHHHTCSCEEEECTT--TCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHT
T ss_pred hhcccCCc--eEeCCCCCHHHHHHHHHHCCCCeEEEEeCC--CCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhc
Confidence 35667777 899999999999999988 66 9999842 48999999999986211 0 12345554
Q ss_pred -cc-cCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 170 -MR-DCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 170 -m~-~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
|+ + +++++.+++++.++++.|.+++++.+||+|+ |+++|+||.+|+++...
T Consensus 197 v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 197 IGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp CSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGG
T ss_pred ccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHh
Confidence 54 5 8899999999999999999999999999997 99999999999998765
No 106
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.10 E-value=4.6e-09 Score=111.45 Aligned_cols=196 Identities=14% Similarity=0.141 Sum_probs=128.6
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEee--C-CeeeeEEeechhhhhhcCCCCCCCccCCCCc-ceEE
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEK--D-GERLDVVTREDVERLKGYPNLGKGTVGPDGK-WMVG 240 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd--~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~-l~v~ 240 (505)
.+.++|++ +++++.+++++.+++++|.+++...+||+| + ++++|+||.+|++........ ..+.-.+ -.+
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~~~~~---v~~im~~~~~~- 164 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAP---ISEHMTSEHLV- 164 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSCSSSB---TTTSCCCSCCC-
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhccCCCc---HHHHcCCCCCE-
Confidence 35789998 999999999999999999999999999999 7 999999999999874221110 1111000 011
Q ss_pred EeecCCccHHHHHHHHHHcCccEEEEeCCCCCc---hhHHHHHHHHHHhC--C--CceEEEcc-c----CCHHHHHHHHH
Q 010640 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNS---SFQIEMIKYAKKTY--P--ELDVIGGN-V----VTMYQAQNLIE 308 (505)
Q Consensus 241 a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~---~~~~~~i~~l~~~~--~--~~~Vi~g~-V----~t~e~a~~l~~ 308 (505)
.+.......+.++.+.+.+...+.+....|.. ....+.++.+.+.. . ...+.++. + .+.+.++++.+
T Consensus 165 -~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~ 243 (491)
T 1zfj_A 165 -TAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFE 243 (491)
T ss_dssp -CEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred -EECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHH
Confidence 11123346778888888888877664444321 12334444444211 0 11122221 1 24789999999
Q ss_pred cCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 309 AGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 309 aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
+|+|++.++...| +.......+..+ +... ++|++ .||+.+..++.+++.+||++|.+|.
T Consensus 244 ~G~d~ivi~~a~g----------~~~~~~~~i~~l---~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 244 AGADAIVIDTAHG----------HSAGVLRKIAEI---RAHFPNRTLI-AGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HTCSEEEECCSCT----------TCHHHHHHHHHH---HHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEEECS
T ss_pred cCCCeEEEeeecC----------cchhHHHHHHHH---HHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEEECc
Confidence 9999998863211 111123333333 3344 69999 7999999999999999999999883
No 107
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.03 E-value=5.1e-09 Score=99.20 Aligned_cols=130 Identities=16% Similarity=0.304 Sum_probs=94.1
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC-c-hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN-S-SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~-~-~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
.+.++.+.++|++.+.++..... + ....+.++.+++.+|+.++++ ++.+.+++..+.++|+|+|.++.++.. ...+
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t-~~~~ 155 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYT-SYTQ 155 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSS-TTST
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCc-CCCC
Confidence 46677788999999999775422 1 245688888999887777766 778999999999999999977533211 0001
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
... ...+.+..+. +..+..++||+++|||.++.|+.+++++||++|++|+.|..
T Consensus 156 ~~~-~~~~~~~~~~---~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 156 GQL-LYQNDFQFLK---DVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp TCC-TTHHHHHHHH---HHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCC-CCcccHHHHH---HHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 000 0123333443 44444679999999999999999999999999999998753
No 108
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.02 E-value=3.1e-09 Score=107.22 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=87.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCc---------hhHHHHHHHHHHhC--------CCceEEEcccC--C----HHHHHH
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNS---------SFQIEMIKYAKKTY--------PELDVIGGNVV--T----MYQAQN 305 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~---------~~~~~~i~~l~~~~--------~~~~Vi~g~V~--t----~e~a~~ 305 (505)
+.+.++.+. .|+|++.++.++.+. ....+.++++++.. ++.||+++-.. + .+.++.
T Consensus 155 ~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~ 233 (336)
T 1f76_A 155 YLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADS 233 (336)
T ss_dssp HHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHH
Confidence 333444443 489999998754332 23456777777764 26899987433 2 344788
Q ss_pred HHHcCCCEEEEccCCcceeec------cccccc-CcC-hHHHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhCCC
Q 010640 306 LIEAGVDGLRVGMGSGSICTT------QEVCAV-GRG-QATAVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLGAS 375 (505)
Q Consensus 306 l~~aGad~I~v~~g~g~~~~~------~~~~g~-g~p-~~~~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lGA~ 375 (505)
+.++|+|+|.++++..+.... ....|+ |.+ ...++..+.+..+.. ++|||++|||.++.|+.+++++|||
T Consensus 234 l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd 313 (336)
T 1f76_A 234 LVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGAS 313 (336)
T ss_dssp HHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred HHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCC
Confidence 999999999998543111000 011122 111 112233333333334 6999999999999999999999999
Q ss_pred EEEeccccc
Q 010640 376 TVMMGSFLA 384 (505)
Q Consensus 376 ~V~~G~~f~ 384 (505)
+|++|+.|+
T Consensus 314 ~V~igr~~l 322 (336)
T 1f76_A 314 LVQIYSGFI 322 (336)
T ss_dssp EEEESHHHH
T ss_pred EEEeeHHHH
Confidence 999999986
No 109
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.00 E-value=1.3e-09 Score=109.32 Aligned_cols=110 Identities=13% Similarity=0.082 Sum_probs=91.7
Q ss_pred cccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCC-e----EEEEEecccccccc--------cccccccc---
Q 010640 108 IFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRS-R----ILGYVTKSDWENLS--------DNKVKIFD--- 168 (505)
Q Consensus 108 ~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g-~----lvGivt~~Dl~~~~--------~~~~~v~~--- 168 (505)
|...+..++++++.++.++++.|.+ ++ +||+|+ ++ + ++|+||.+|+.... ....++.+
T Consensus 113 m~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~ 189 (334)
T 2qrd_G 113 GAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV---DGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMTI 189 (334)
T ss_dssp TCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE---ETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSSC
T ss_pred ccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC---CCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhCC
Confidence 3334334789999999999999987 65 999986 44 4 99999999986211 12367888
Q ss_pred ccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 169 YMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 169 im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+|++ +++++.+++++.++++.|.+++.+.+||+|+ |+++|+||.+|+++...
T Consensus 190 ~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 190 GTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp SBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHT
T ss_pred cccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhh
Confidence 4887 9999999999999999999999999999998 99999999999998754
No 110
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.91 E-value=3.8e-08 Score=93.06 Aligned_cols=110 Identities=18% Similarity=0.226 Sum_probs=90.9
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCccee
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~ 324 (505)
..++..+.++.+++.|++++.+..... ...+.++.+++.+|+..+.+|+|.+.++++.+.++|+++|....
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~---~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~------ 114 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSD---AAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG------ 114 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTST---THHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCC---CHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC------
Confidence 345688899999999999999976543 35688888999988888888999999999999999999994320
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
. . .++.++++..++|+++ |+.|+.++.+|+.+|||.|.+
T Consensus 115 ~----------~----~~vi~~~~~~gi~~ip--Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 115 F----------N----PNTVRACQEIGIDIVP--GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp C----------C----HHHHHHHHHHTCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred C----------C----HHHHHHHHHcCCCEEc--CCCCHHHHHHHHHcCCCEEEE
Confidence 0 1 2344556667899999 899999999999999999976
No 111
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.89 E-value=5.3e-09 Score=104.70 Aligned_cols=178 Identities=13% Similarity=0.103 Sum_probs=115.3
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCC---------------chhHHHHHHHHHHhCCCceEEEc---ccC---CHHHHH
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGN---------------SSFQIEMIKYAKKTYPELDVIGG---NVV---TMYQAQ 304 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~---------------~~~~~~~i~~l~~~~~~~~Vi~g---~V~---t~e~a~ 304 (505)
++...+.++.+.++ +|.|.++..+.. .....+.++.+++.+ +.||.++ ++. +.+.++
T Consensus 70 ~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~ 147 (318)
T 1vhn_A 70 PNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYR 147 (318)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHH
Confidence 34466667777777 999999864321 234677888888887 5898887 443 237899
Q ss_pred HHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHH-hCCCEEEecccc
Q 010640 305 NLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALV-LGASTVMMGSFL 383 (505)
Q Consensus 305 ~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~-lGA~~V~~G~~f 383 (505)
.+.++|+|+|.+..+ .... ... +.+....+..+ ++ ++|||++|||.++.|+.++++ .|||+|++|+.|
T Consensus 148 ~l~~~G~d~i~v~g~--~~~~--~~~--~~~~~~~i~~i----~~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~ 216 (318)
T 1vhn_A 148 ILVEEGVDEVFIHTR--TVVQ--SFT--GRAEWKALSVL----EK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGA 216 (318)
T ss_dssp HHHHTTCCEEEEESS--CTTT--TTS--SCCCGGGGGGS----CC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGG
T ss_pred HHHHhCCCEEEEcCC--Cccc--cCC--CCcCHHHHHHH----Hc-CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHH
Confidence 999999999998521 1000 000 11222222222 22 799999999999999999999 799999999998
Q ss_pred cCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhccC
Q 010640 384 AGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLG 463 (505)
Q Consensus 384 ~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~G 463 (505)
+...+-..... .++. .| . ....++.+.++.+...++..|.+.|
T Consensus 217 l~~P~l~~~~~-------------------------~~~~--------~g-~---~~~~~~~~~~~~~~~~~~~~~~~~g 259 (318)
T 1vhn_A 217 IGRPWIFKQIK-------------------------DFLR--------SG-K---YSEPSREEILRTFERHLELLIKTKG 259 (318)
T ss_dssp TTCTTHHHHHH-------------------------HHHH--------HS-C---CCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HhCcchHHHHH-------------------------HHHh--------CC-C---CCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 75332211100 0000 01 0 0123567888888888888888888
Q ss_pred CC-CHHHHHHh
Q 010640 464 AS-SLQSAHDL 473 (505)
Q Consensus 464 ~~-~~~~l~~~ 473 (505)
++ .+.++++.
T Consensus 260 ~~~~~~~~~~~ 270 (318)
T 1vhn_A 260 ERKAVVEMRKF 270 (318)
T ss_dssp HHHHHHHHHTT
T ss_pred chHHHHHHHHH
Confidence 64 56666654
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.88 E-value=1.6e-08 Score=107.37 Aligned_cols=191 Identities=17% Similarity=0.172 Sum_probs=125.8
Q ss_pred cccc-CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCC
Q 010640 107 PIFS-SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPAN 182 (505)
Q Consensus 107 ~~~~-~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 182 (505)
+|.+ ++ ++++++.++.+++++|.+ ++ +||+|+ +|+++|+||.+|+.........+.+.+.+.--...+...
T Consensus 180 vM~~~~~--vtv~~~~~l~eal~~m~~~~i~~lpVVDe---~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~ 254 (511)
T 3usb_A 180 VMTKEQL--ITAPVGTTLSEAEKILQKYKIEKLPLVDN---NGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVT 254 (511)
T ss_dssp HCCCCCC--CCEETTCCHHHHHHHHHHHTCSEEEEECT---TSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSS
T ss_pred hcccCCC--EEECCCCCHHHHHHHHHHcCCCEEEEEeC---CCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeec
Confidence 5555 66 899999999999999998 76 999998 999999999999974333333445555541122234444
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGV 261 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGa 261 (505)
....+.++.+.+.+++.+.|-.. +...+++ ++++.... ......++...+. ..+.++.+.++|+
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~---~~i~~i~~--------~~~~~~vi~g~v~----t~e~a~~~~~aGa 319 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVI---DKVKEVRA--------KYPSLNIIAGNVA----TAEATKALIEAGA 319 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHH---HHHHHHHH--------HCTTSEEEEEEEC----SHHHHHHHHHHTC
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhh---hHHHHHHH--------hCCCceEEeeeec----cHHHHHHHHHhCC
Confidence 45567778888899997766544 5444432 22322211 0111123333443 3467888999999
Q ss_pred cEEEEeCCCCC----------chhHHHHHHHHHHhC--CCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 262 NVVVLDSSQGN----------SSFQIEMIKYAKKTY--PELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 262 d~I~i~~~~g~----------~~~~~~~i~~l~~~~--~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
|++.+....|. ....++.+..+.+.. .++|||+ |++.+.+++.+++.+|||++.++
T Consensus 320 d~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 320 NVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp SEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheec
Confidence 99988432221 122344444443322 1689988 89999999999999999999987
No 113
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.87 E-value=2e-08 Score=95.93 Aligned_cols=127 Identities=17% Similarity=0.292 Sum_probs=92.2
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCC-c--hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGN-S--SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~-~--~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
..+.++.+.++|++.+.++..... + ....+.++.+++.+++.++++ ++.+.++++.+.++|+|+|.....+... .
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g~~~-~ 167 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSGYTP-Y 167 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSST-T
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccccCC-C
Confidence 457788899999999999775422 1 245678888998887777665 7889999999999999999211111100 0
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
+... ..+.+..+.++. +. ++||+++|||.++.++.+++.+||++|++|+.|.
T Consensus 168 ~~~~---~~~~~~~i~~~~---~~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 168 SRQE---AGPDVALIEALC---KA-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp SCCS---SSCCHHHHHHHH---HT-TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred CcCC---CCCCHHHHHHHH---hC-CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 1111 123444454443 34 7999999999999999999999999999999875
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.85 E-value=7.1e-09 Score=110.14 Aligned_cols=194 Identities=15% Similarity=0.109 Sum_probs=78.8
Q ss_pred cCCccccC--CCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceE
Q 010640 104 RRVPIFSS--SLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVS 178 (505)
Q Consensus 104 ~~~~~~~~--p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~ 178 (505)
..++|..+ + +++++++++.+++++|.+ ++ +||+|+ +++++|+||.+|+...........+.+.+.-....
T Consensus 163 V~diM~~~~~~--~tv~~~~sl~ea~~~m~~~~i~~lpVVDe---~g~lvGiIT~~Dil~~~~~~~~~~d~~~~l~v~a~ 237 (503)
T 1me8_A 163 VSDMMTPFSKL--VTAHQDTKLSEANKIIWEKKLNALPIIDD---DQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVGAG 237 (503)
T ss_dssp ----------------------------------------------------------------CCCCBCTTSCBCCEEE
T ss_pred HHHHhCCCCCC--EEEcCCCcHHHHHHHHHHcCCCEEEEEcC---CCeEEEEEEecHHHHhhhcccchhccccccccccc
Confidence 44577766 7 999999999999999999 76 999998 89999999999996332111112222221001123
Q ss_pred ecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHH
Q 010640 179 VPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLV 257 (505)
Q Consensus 179 v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li 257 (505)
+.. ....+.++.|.+.+++.+.|-.+ +...|+++.-+.++... + +...++...+. ..+.++.++
T Consensus 238 v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~-~---------~~~~Vi~G~V~----t~~~a~~l~ 302 (503)
T 1me8_A 238 INT-RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKY-G---------DKVKVGAGNIV----DGEGFRYLA 302 (503)
T ss_dssp ECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHH-G---------GGSCEEEEEEC----SHHHHHHHH
T ss_pred cCc-hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhC-C---------CCceEeecccc----CHHHHHHHH
Confidence 344 56667788888889987666333 66555443333333321 0 00112222332 346778899
Q ss_pred HcCccEEEEeCCCCC----------chhHHHHHHHHHHhCC--------CceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 258 KAGVNVVVLDSSQGN----------SSFQIEMIKYAKKTYP--------ELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 258 eaGad~I~i~~~~g~----------~~~~~~~i~~l~~~~~--------~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
++|++++.+....|. .......+..+.+... ++|||+ |++.++.++.+++.+|||++.++
T Consensus 303 ~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 303 DAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp HHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 999999988332211 1123344444433221 478887 89999999999999999999886
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.83 E-value=5.5e-09 Score=110.45 Aligned_cols=195 Identities=18% Similarity=0.163 Sum_probs=55.4
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCC-C-CcceEEEe
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGP-D-GKWMVGAA 242 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~-~-~~l~v~a~ 242 (505)
.+.++|.+ +++++++++++.+++++|.++++..+||+|+++++|+||..|+......... ..+. . ..-.+.+.
T Consensus 89 ~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~---V~~vMtp~~~~vtv~ 163 (490)
T 4avf_A 89 KHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDT---VAAIMTPKDKLVTAR 163 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCc---HHHHhccCCCCEEEC
Confidence 56788988 9999999999999999999999999999999999999999999643221111 1110 0 00011111
Q ss_pred ecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHh-CC----------CceEEEccc-CCHHHHHHHHHcC
Q 010640 243 IGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKT-YP----------ELDVIGGNV-VTMYQAQNLIEAG 310 (505)
Q Consensus 243 i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~-~~----------~~~Vi~g~V-~t~e~a~~l~~aG 310 (505)
......+..+.+.+.+...+.|....|...+.+..-..++.. +| .+.+.+|.- .+.+.++.+.++|
T Consensus 164 --~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG 241 (490)
T 4avf_A 164 --EGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAG 241 (490)
T ss_dssp ---------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTT
T ss_pred --CCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhcc
Confidence 112234555556666666654433333333333322222211 11 122233332 4578899999999
Q ss_pred CCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 311 VDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 311 ad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
+|+|.+....| +.......+..++ +.+ ++||++ |++.+..++.++..+|||+|.+|
T Consensus 242 ~d~I~id~a~g----------~~~~~~~~v~~i~---~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 242 VDVVVVDTAHG----------HSKGVIERVRWVK---QTFPDVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp CSEEEEECSCC----------SBHHHHHHHHHHH---HHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred cceEEecccCC----------cchhHHHHHHHHH---HHCCCceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 99998853211 1112233444433 334 588988 67999999999999999999986
No 116
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.81 E-value=1.8e-07 Score=90.71 Aligned_cols=181 Identities=11% Similarity=0.083 Sum_probs=123.0
Q ss_pred EecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHH
Q 010640 178 SVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHL 256 (505)
Q Consensus 178 ~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~l 256 (505)
.+.++.+..+..+.+.+.|...+-|+++ +.+-| +..++-...... .+++-...... ....+..+
T Consensus 74 ~i~~~~dp~~~A~~y~~~GA~~IsVltd~~~f~G--s~~~L~~ir~~v-----------~lPVl~Kdfi~--d~~qi~ea 138 (272)
T 3tsm_A 74 LIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQG--APEFLTAARQAC-----------SLPALRKDFLF--DPYQVYEA 138 (272)
T ss_dssp ESCSSCCHHHHHHHHHHTTCSEEEEECCSTTTCC--CHHHHHHHHHTS-----------SSCEEEESCCC--STHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHCCCCEEEEeccccccCC--CHHHHHHHHHhc-----------CCCEEECCccC--CHHHHHHH
Confidence 3556778889999999999999999988 76667 566665443221 12222222111 11246667
Q ss_pred HHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcCh
Q 010640 257 VKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQ 336 (505)
Q Consensus 257 ieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~ 336 (505)
.+.|+|.+.+..+.=......+.++..++. +..+++ ++.+.+++..+.++|+|.|-+. .+....+.. .
T Consensus 139 ~~~GAD~VlLi~a~L~~~~l~~l~~~a~~l--Gl~~lv-evh~~eEl~~A~~~ga~iIGin--------nr~l~t~~~-d 206 (272)
T 3tsm_A 139 RSWGADCILIIMASVDDDLAKELEDTAFAL--GMDALI-EVHDEAEMERALKLSSRLLGVN--------NRNLRSFEV-N 206 (272)
T ss_dssp HHTTCSEEEEETTTSCHHHHHHHHHHHHHT--TCEEEE-EECSHHHHHHHTTSCCSEEEEE--------CBCTTTCCB-C
T ss_pred HHcCCCEEEEcccccCHHHHHHHHHHHHHc--CCeEEE-EeCCHHHHHHHHhcCCCEEEEC--------CCCCccCCC-C
Confidence 889999998866532223344555555554 777777 8899999999999999988332 223333322 2
Q ss_pred HHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 337 ATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 337 ~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
+.....+..... .++|+|+.|||.++.|+.++..+||++|.+|+.|..+
T Consensus 207 l~~~~~L~~~ip-~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~ 255 (272)
T 3tsm_A 207 LAVSERLAKMAP-SDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQ 255 (272)
T ss_dssp THHHHHHHHHSC-TTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTS
T ss_pred hHHHHHHHHhCC-CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 344444444333 2689999999999999999999999999999999754
No 117
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.80 E-value=6.4e-09 Score=110.41 Aligned_cols=197 Identities=17% Similarity=0.183 Sum_probs=54.3
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccC-CCC-cceEEE
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVG-PDG-KWMVGA 241 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d-~~~-~l~v~a 241 (505)
.+.++|++ +++++.+++++.+++++|.++++..+||+|+ ++++|+||..|+......... ..+ ... .-.+.+
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~~~~~---v~~im~~~~~~~~v 170 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKNLSKK---IKDLMTPREKLIVA 170 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcCCCCc---HHHHhCCCCCCeEE
Confidence 46788998 9999999999999999999999999999998 999999999999863211000 111 000 001111
Q ss_pred eecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-C------CceEEE-cccCC----HHHHHHHHHc
Q 010640 242 AIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-P------ELDVIG-GNVVT----MYQAQNLIEA 309 (505)
Q Consensus 242 ~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~------~~~Vi~-g~V~t----~e~a~~l~~a 309 (505)
. ......+.++.+.+.+...+.|....|...+.+..-..++... + +..+++ +.+.+ .+.+..+.++
T Consensus 171 ~--~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~a 248 (494)
T 1vrd_A 171 P--PDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKA 248 (494)
T ss_dssp ----------------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred C--CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccccccccchhhhccccccCcCHhHHHHHHHHHHh
Confidence 1 1122445555666667666544333333223333222222211 1 112222 23333 6788999999
Q ss_pred CCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 310 GVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 310 Gad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
|+|++.+....| .....++.+..+++... ++||+. |++.+..++.++..+|||++.+|.
T Consensus 249 Gvd~v~i~~~~G----------~~~~~~e~i~~i~~~~p--~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 249 GVDVIVIDTAHG----------HSRRVIETLEMIKADYP--DLPVVA-GNVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp TCSEEEECCSCC----------SSHHHHHHHHHHHHHCT--TSCEEE-EEECSHHHHHHHHHTTCSEEEECS
T ss_pred CCCEEEEEecCC----------chHHHHHHHHHHHHHCC--CceEEe-CCcCCHHHHHHHHHcCCCEEEEcC
Confidence 999998853211 11113344444443321 589988 789999999999999999999864
No 118
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.78 E-value=9.2e-08 Score=89.15 Aligned_cols=110 Identities=20% Similarity=0.186 Sum_probs=91.7
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCccee
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~ 324 (505)
..++....++.+++.|+++++++.... ...+.++.+++.+|+..|.+|+|.|.++++.++++|+++|+-. +
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~t~---~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP------~ 93 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLRTE---AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSP------G 93 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETTST---THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEES------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCc---cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeC------C
Confidence 456788899999999999999977543 4678889999999888899999999999999999999999432 1
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCC------cEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGV------PVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~i------pvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
. + .++.+.++++++ |+++ |+.|+.++.+|+.+|||.|.+
T Consensus 94 ~----------~----~evi~~~~~~~v~~~~~~~~~P--G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 94 L----------T----PELIEKAKQVKLDGQWQGVFLP--GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp C----------C----HHHHHHHHHHHHHCSCCCEEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred C----------c----HHHHHHHHHcCCCccCCCeEeC--CCCCHHHHHHHHHcCCCEEEE
Confidence 1 1 244556666778 9999 999999999999999999954
No 119
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.77 E-value=1e-08 Score=108.49 Aligned_cols=194 Identities=17% Similarity=0.190 Sum_probs=113.7
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCC-C-C-cceEE
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGP-D-G-KWMVG 240 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~-~-~-~l~v~ 240 (505)
.+.++|++ +++++.+++++.+++++|.++++..+||+|+ ++++|+||.+|+......... ..+. . . .+. .
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~---v~diM~p~~~~v-t 163 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKS---VAAVMTPKERLA-T 163 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSB---GGGTSEEGGGCC-E
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCc---HHHHhcCCCCCE-E
Confidence 45678988 9999999999999999999999999999998 999999999999743221111 1111 0 0 111 1
Q ss_pred EeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHH-hCC--------CceEEE--cc-cCCHHHHHHHHH
Q 010640 241 AAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK-TYP--------ELDVIG--GN-VVTMYQAQNLIE 308 (505)
Q Consensus 241 a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~-~~~--------~~~Vi~--g~-V~t~e~a~~l~~ 308 (505)
+.. .....+.++.+.+.+...+.+....|...+.+..-..++. .+| .+.+.+ |. ..+.+.++.+.+
T Consensus 164 v~~--~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~ 241 (496)
T 4fxs_A 164 VKE--GATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVE 241 (496)
T ss_dssp EEC--C----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHH
T ss_pred ECC--CCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHHHHh
Confidence 111 1123344444555666655443333322111111111111 111 122222 22 246899999999
Q ss_pred cCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 309 AGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 309 aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
+|+|.|.+....+ +....+..+..+++ .+ ++||++ |++.+..++.++..+|||+|.+|
T Consensus 242 aG~d~I~id~a~g----------~~~~~~~~i~~ir~---~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 242 AGVDVLLIDSSHG----------HSEGVLQRIRETRA---AYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp TTCSEEEEECSCT----------TSHHHHHHHHHHHH---HCTTCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred ccCceEEeccccc----------cchHHHHHHHHHHH---HCCCceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 9999998853211 11122334444433 33 689988 77999999999999999999986
No 120
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.74 E-value=1.7e-07 Score=94.85 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=90.2
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCC---------------chhHHHHHHHHHHhCCCceEEEcc---cC-------CH
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGN---------------SSFQIEMIKYAKKTYPELDVIGGN---VV-------TM 300 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~---------------~~~~~~~i~~l~~~~~~~~Vi~g~---V~-------t~ 300 (505)
++...+.++.+.+.|+|.|.++..+.. ...+.+.++.+++.. ++||.++- .. ..
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~ 147 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLA 147 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHH
Confidence 345667777788889999999864322 234567778888876 78888842 21 24
Q ss_pred HHHHHHHHcCCCEEEEccCCc--ceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEE
Q 010640 301 YQAQNLIEAGVDGLRVGMGSG--SICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTV 377 (505)
Q Consensus 301 e~a~~l~~aGad~I~v~~g~g--~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V 377 (505)
+.++.+.++|+|+|.+..+.. +....... .........+..+++ .. ++|||+.|||.++.|+.++++ |||+|
T Consensus 148 ~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~-~~~~~~~~~i~~ik~---~~~~iPVianGgI~s~eda~~~l~-GaD~V 222 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHARSALLALSTKANR-EIPPLRHDWVHRLKG---DFPQLTFVTNGGIRSLEEALFHLK-RVDGV 222 (350)
T ss_dssp HHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHH---HCTTSEEEEESSCCSHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHcCCCEEEEecCchhcccCccccc-CCCcccHHHHHHHHH---hCCCCeEEEECCcCCHHHHHHHHh-CCCEE
Confidence 567889999999999852210 00000000 000012344444443 34 799999999999999999998 99999
Q ss_pred EecccccCC
Q 010640 378 MMGSFLAGS 386 (505)
Q Consensus 378 ~~G~~f~~~ 386 (505)
|+|+.|+..
T Consensus 223 ~iGRa~l~~ 231 (350)
T 3b0p_A 223 MLGRAVYED 231 (350)
T ss_dssp EECHHHHHC
T ss_pred EECHHHHhC
Confidence 999998754
No 121
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.70 E-value=9.9e-08 Score=89.06 Aligned_cols=135 Identities=18% Similarity=0.174 Sum_probs=92.2
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCC-CceEEEcccCCHHHHHHHHHcCCCEEEEccCCcc--
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYP-ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGS-- 322 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~-~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~-- 322 (505)
.++..+.++.+.+.|++++.++.... ...+.++.+|+.+| +.++.++++.+.++++.+.++|+|++ ++.+-..
T Consensus 21 ~~~~~~~~~~~~~~G~~~iev~~~~~---~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~~~~ 96 (205)
T 1wa3_A 21 VEEAKEKALAVFEGGVHLIEITFTVP---DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHLDEEI 96 (205)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETTST---THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSCCHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCCCCHHH
Confidence 34566778888899999999977543 33556777777764 57777888899999999999999999 6522110
Q ss_pred --------------eeeccc-----cccc---C-cC-hHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEE
Q 010640 323 --------------ICTTQE-----VCAV---G-RG-QATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTV 377 (505)
Q Consensus 323 --------------~~~~~~-----~~g~---g-~p-~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V 377 (505)
..+..+ ..|. . .| ....+..+.+..... ++||+++|||. ..++.+++.+||++|
T Consensus 97 ~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v 175 (205)
T 1wa3_A 97 SQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAV 175 (205)
T ss_dssp HHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCE
T ss_pred HHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEE
Confidence 000000 0000 0 01 111233344444445 69999999996 789999999999999
Q ss_pred EecccccC
Q 010640 378 MMGSFLAG 385 (505)
Q Consensus 378 ~~G~~f~~ 385 (505)
.+|+.|..
T Consensus 176 ~vGs~i~~ 183 (205)
T 1wa3_A 176 GVGSALVK 183 (205)
T ss_dssp EECHHHHC
T ss_pred EECccccC
Confidence 99998864
No 122
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.67 E-value=1.3e-07 Score=95.94 Aligned_cols=162 Identities=15% Similarity=0.110 Sum_probs=96.4
Q ss_pred HHHHcCccEEEEeCCCCCc----------hhHHHHHHHHHHhCCCceEEEcccC--CH----HHHHHHHHcCCCEEEEcc
Q 010640 255 HLVKAGVNVVVLDSSQGNS----------SFQIEMIKYAKKTYPELDVIGGNVV--TM----YQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 255 ~lieaGad~I~i~~~~g~~----------~~~~~~i~~l~~~~~~~~Vi~g~V~--t~----e~a~~l~~aGad~I~v~~ 318 (505)
.+...++|+++++.++.+. ....+.++.+++.. ..|+.++-.. +. ..+..+.+.+.......+
T Consensus 150 ~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~-~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i 228 (354)
T 3tjx_A 150 AVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHh-hcccccccCCCCCchhHHHHHHHHHhhcccchhhee
Confidence 3344579999998865332 23445566666665 6777775322 21 122333344333332222
Q ss_pred CC---cc-ee---------ecccccccCcChHH--HHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEeccc
Q 010640 319 GS---GS-IC---------TTQEVCAVGRGQAT--AVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMGSF 382 (505)
Q Consensus 319 g~---g~-~~---------~~~~~~g~g~p~~~--~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~ 382 (505)
.. +. +. ......|...+.+. ++..+++..+.. ++|||+.|||.++.|+.+.+.+||++||+||.
T Consensus 229 ~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta 308 (354)
T 3tjx_A 229 NSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTA 308 (354)
T ss_dssp CCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHH
T ss_pred cccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChh
Confidence 11 00 00 00011222222222 333344443332 58999999999999999999999999999998
Q ss_pred ccCCCCCCccceeecCeEeeeecccCcHHHHhccccccccccccccccccceeeeeccCCchhhHHHHHHHHHHHHhhcc
Q 010640 383 LAGSTEAPGAYVYQNGRRVKKYRGMGSLEAMTKGSDQRYLGDKAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDL 462 (505)
Q Consensus 383 f~~~~Es~~~~~~~~~~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~m~~~ 462 (505)
|.. +| + .++.++..+|+..|...
T Consensus 309 ~~y----------------------------------------------~G---------P--~~~~~I~~~L~~~L~~~ 331 (354)
T 3tjx_A 309 LQE----------------------------------------------EG---------P--SIFERLTSELLGVMAKK 331 (354)
T ss_dssp HHH----------------------------------------------HC---------T--THHHHHHHHHHHHHHHH
T ss_pred hhh----------------------------------------------cC---------c--hHHHHHHHHHHHHHHHc
Confidence 741 11 1 45678999999999999
Q ss_pred CCCCHHHHHHhh
Q 010640 463 GASSLQSAHDLL 474 (505)
Q Consensus 463 G~~~~~~l~~~~ 474 (505)
|.++++|++.++
T Consensus 332 G~~si~e~~G~~ 343 (354)
T 3tjx_A 332 RYQTLDEFRGKV 343 (354)
T ss_dssp TCCSGGGTTTCC
T ss_pred CCCCHHHHhChh
Confidence 999999998764
No 123
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.66 E-value=2.2e-07 Score=90.38 Aligned_cols=180 Identities=14% Similarity=0.181 Sum_probs=112.0
Q ss_pred ecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHH
Q 010640 179 VPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLV 257 (505)
Q Consensus 179 v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li 257 (505)
+.++.+..+..+...+.|...+-|+++ +.+-|-. .++-...... .+++-...... ....++.+.
T Consensus 68 i~~~~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~--~~l~~ir~~v-----------~lPvl~kdfii--d~~qv~~A~ 132 (272)
T 3qja_A 68 LATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSL--DDLDAVRASV-----------SIPVLRKDFVV--QPYQIHEAR 132 (272)
T ss_dssp -----CHHHHHHHHHHTTCSEEEEECCGGGHHHHH--HHHHHHHHHC-----------SSCEEEESCCC--SHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHcCCCEEEEecChhhcCCCH--HHHHHHHHhC-----------CCCEEECcccc--CHHHHHHHH
Confidence 445667788889999999999999887 6666632 2332221110 11121111111 223466777
Q ss_pred HcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChH
Q 010640 258 KAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQA 337 (505)
Q Consensus 258 eaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~ 337 (505)
+.|+|.+.+....-......+.++..++. +..+++ ++.+.+++..+.++|+|.|-+.+ +....+. +.+
T Consensus 133 ~~GAD~VlLi~a~l~~~~l~~l~~~a~~l--Gl~~lv-ev~t~ee~~~A~~~Gad~IGv~~--------r~l~~~~-~dl 200 (272)
T 3qja_A 133 AHGADMLLLIVAALEQSVLVSMLDRTESL--GMTALV-EVHTEQEADRALKAGAKVIGVNA--------RDLMTLD-VDR 200 (272)
T ss_dssp HTTCSEEEEEGGGSCHHHHHHHHHHHHHT--TCEEEE-EESSHHHHHHHHHHTCSEEEEES--------BCTTTCC-BCT
T ss_pred HcCCCEEEEecccCCHHHHHHHHHHHHHC--CCcEEE-EcCCHHHHHHHHHCCCCEEEECC--------Ccccccc-cCH
Confidence 89999998843322223344455555554 777776 78899999999999999986642 1111111 122
Q ss_pred HHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 338 TAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 338 ~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
..+..+.+... .++|+|+.|||.++.|+.++..+||++|.+|+.|..+
T Consensus 201 ~~~~~l~~~v~-~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 201 DCFARIAPGLP-SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp THHHHHGGGSC-TTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHHHHhCc-ccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 33333322221 1689999999999999999999999999999999754
No 124
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.63 E-value=1.2e-07 Score=98.70 Aligned_cols=191 Identities=12% Similarity=0.149 Sum_probs=77.7
Q ss_pred ccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccc-cccccCCCceE
Q 010640 103 SRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIF-DYMRDCSSNVS 178 (505)
Q Consensus 103 ~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~-~im~~~~~~~~ 178 (505)
.+.++|+.++ ++++++.++++|.++|.+ ++ +||||+ +++|+|+||.+|+......+.... +--.+ -.+-
T Consensus 201 ~V~evMT~~l--vt~~~~~~leeA~~iL~~~kieklpVVd~---~g~LvGlIT~kDi~k~~~~p~A~k~d~~gr--L~Vg 273 (556)
T 4af0_A 201 PIKSVMTTEV--VTGSSPITLEKANSLLRETKKGKLPIVDS---NGHLVSLVARSDLLKNQNYPYASKVPESKQ--LYCG 273 (556)
T ss_dssp --------------------------------------------------------------CTTCCBCTTTCC--BCCE
T ss_pred Ehhhhcccce--EEecCCCCHHHHHHHHHHccccceeEEcc---CCcEEEEEEechhhhhhhCCcchhcchhhc--eeeE
Confidence 4556888887 999999999999999999 77 999998 999999999999964321110000 00000 0111
Q ss_pred --ecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHH
Q 010640 179 --VPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLE 254 (505)
Q Consensus 179 --v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~ 254 (505)
+.-...-.+-++.|.+.+++ +.|+|- |.-.+++..-.-++.. ++. -.+++.++. ..+.++
T Consensus 274 AAVgv~~d~~eR~~aLv~AGvD-~iviD~ahGhs~~v~~~i~~ik~~-~p~----------~~viaGNVa----T~e~a~ 337 (556)
T 4af0_A 274 AAIGTRPGDKDRLKLLAEAGLD-VVVLDSSQGNSVYQIEFIKWIKQT-YPK----------IDVIAGNVV----TREQAA 337 (556)
T ss_dssp EEECSSHHHHHHHHHHHHTTCC-EEEECCSCCCSHHHHHHHHHHHHH-CTT----------SEEEEEEEC----SHHHHH
T ss_pred EEeccCccHHHHHHHHHhcCCc-EEEEeccccccHHHHHHHHHHHhh-CCc----------ceEEecccc----CHHHHH
Confidence 12222345666778888997 456765 6655554333333322 111 123444553 447788
Q ss_pred HHHHcCccEEEEeCCC----------CCchhHHHHHHHHHH---hCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 255 HLVKAGVNVVVLDSSQ----------GNSSFQIEMIKYAKK---TYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 255 ~lieaGad~I~i~~~~----------g~~~~~~~~i~~l~~---~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.|+++|+|++-+.... |.....+..+..+.+ .+ ++|||+ |++.+..+..+++.+|||++.++
T Consensus 338 ~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 338 QLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRF-GIPCIADGGIGNIGHIAKALALGASAVMMG 413 (556)
T ss_dssp HHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHc-CCCEEecCCcCcchHHHHHhhcCCCEEEEc
Confidence 8999999999886532 222234444444432 33 789999 88999999999999999999997
No 125
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.62 E-value=6.2e-08 Score=93.00 Aligned_cols=175 Identities=16% Similarity=0.128 Sum_probs=106.8
Q ss_pred CHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCcc
Q 010640 184 DLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVN 262 (505)
Q Consensus 184 ~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad 262 (505)
+..+..+.+.+.+.+.+-|.+. +...|-.+. ++++.... ..+..+.+...+. ..+.++.++++|+|
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~--------~~~ipv~v~ggI~----~~~~~~~~l~~Gad 99 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQ--------AMDIKVELSGGIR----DDDTLAAALATGCT 99 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHH--------HCSSEEEEESSCC----SHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHH--------hcCCcEEEECCcC----CHHHHHHHHHcCCC
Confidence 6677789999999999998875 555555555 55555421 1112233333342 23568888999999
Q ss_pred EEEEeCCC-CCchhHHHHHHHHHHhCC-CceEEEc----cc----------CCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 263 VVVLDSSQ-GNSSFQIEMIKYAKKTYP-ELDVIGG----NV----------VTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 263 ~I~i~~~~-g~~~~~~~~i~~l~~~~~-~~~Vi~g----~V----------~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
.+.++... .++ +.+..+.+.+. .+.+.+. .+ ...+.++.+.+.|++.|.+-. .+
T Consensus 100 ~V~lg~~~l~~p----~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~------~~ 169 (244)
T 1vzw_A 100 RVNLGTAALETP----EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTD------IA 169 (244)
T ss_dssp EEEECHHHHHCH----HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEE------C-
T ss_pred EEEECchHhhCH----HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEec------cC
Confidence 99885521 111 22333333321 1111111 11 225667889999999886531 01
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHh---CCCEEEecccccC
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVL---GASTVMMGSFLAG 385 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~l---GA~~V~~G~~f~~ 385 (505)
+...+.| +.+..+..++ +..++|||++|||.++.|+.+++.+ ||++|++|+.|..
T Consensus 170 ~~~~~~g-~~~~~~~~i~---~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~ 227 (244)
T 1vzw_A 170 KDGTLQG-PNLELLKNVC---AATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYA 227 (244)
T ss_dssp ------C-CCHHHHHHHH---HTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred cccccCC-CCHHHHHHHH---HhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHc
Confidence 1111112 2344454443 3457999999999999999999999 9999999999864
No 126
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.62 E-value=2.5e-08 Score=76.44 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=49.6
Q ss_pred eEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEecccccc--c-c---ccccccccccccCCCceEe
Q 010640 115 VFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWEN--L-S---DNKVKIFDYMRDCSSNVSV 179 (505)
Q Consensus 115 ~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~--~-~---~~~~~v~~im~~~~~~~~v 179 (505)
++++|++|+.+|+++|.+ ++ +||+| +++++||||.+|+.. . . ..+.++.++|++ +++++
T Consensus 3 vtv~p~~tv~ea~~~M~~~~i~~~~V~d----~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~--~~iTV 70 (70)
T 3ghd_A 3 IVVQPKDTVDRVAKILSRNKAGSAVVME----GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK--NPVKI 70 (70)
T ss_dssp EEECTTCBHHHHHHHHHHTTCSEEEEEE----TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE--CTTCC
T ss_pred EEECCCCcHHHHHHHHHHcCCCEEEEEE----CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCC--CCeEC
Confidence 899999999999999999 77 99998 689999999999852 1 1 235689999998 77664
No 127
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.60 E-value=8.3e-08 Score=92.04 Aligned_cols=175 Identities=14% Similarity=0.079 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCcc
Q 010640 184 DLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVN 262 (505)
Q Consensus 184 ~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad 262 (505)
+..+..+.+.+.+.+.+-|.+. +...+-.+. ++++.... .....+.+...+. ..+.++.++++|+|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~--------~~~ipv~v~ggi~----~~~~~~~~l~~Gad 98 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVG--------KLDVQVELSGGIR----DDESLAAALATGCA 98 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHH--------HCSSEEEEESSCC----SHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHH--------hcCCcEEEECCCC----CHHHHHHHHHcCCC
Confidence 5677788889999999998875 544454444 55554421 1111233333332 23568888999999
Q ss_pred EEEEeCCC-CCchhHHHHHHHHHHhCC-CceEEEc--------cc----------CCHHHHHHHHHcCCCEEEEccCCcc
Q 010640 263 VVVLDSSQ-GNSSFQIEMIKYAKKTYP-ELDVIGG--------NV----------VTMYQAQNLIEAGVDGLRVGMGSGS 322 (505)
Q Consensus 263 ~I~i~~~~-g~~~~~~~~i~~l~~~~~-~~~Vi~g--------~V----------~t~e~a~~l~~aGad~I~v~~g~g~ 322 (505)
.+.++... .++ +.+..+.+.++ .+.+.+. +| ...+.++.+.++|++.|.+-.
T Consensus 99 ~V~lg~~~l~~p----~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~---- 170 (244)
T 2y88_A 99 RVNVGTAALENP----QWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTD---- 170 (244)
T ss_dssp EEEECHHHHHCH----HHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEE----
T ss_pred EEEECchHhhCh----HHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEe----
Confidence 99885532 111 22333333321 1111111 11 236778899999999886521
Q ss_pred eeecccccccC-cChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHh---CCCEEEecccccCC
Q 010640 323 ICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVL---GASTVMMGSFLAGS 386 (505)
Q Consensus 323 ~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~l---GA~~V~~G~~f~~~ 386 (505)
+...+.+ .+.+..+..++ +..++|||++|||.++.|+.+++.+ ||++|++|+.|...
T Consensus 171 ----~~~~~~~~g~~~~~~~~l~---~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~ 231 (244)
T 2y88_A 171 ----ITKDGTLGGPNLDLLAGVA---DRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYAR 231 (244)
T ss_dssp ----TTTTTTTSCCCHHHHHHHH---TTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred ----cCCccccCCCCHHHHHHHH---HhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCC
Confidence 1111111 13444554443 3457999999999999999999999 99999999998753
No 128
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.55 E-value=9.5e-07 Score=83.67 Aligned_cols=125 Identities=20% Similarity=0.197 Sum_probs=82.7
Q ss_pred HHHHHHHHHH-c-CccEEEEeCCC------CCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCC
Q 010640 249 DKERLEHLVK-A-GVNVVVLDSSQ------GNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS 320 (505)
Q Consensus 249 ~~e~~~~lie-a-Gad~I~i~~~~------g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~ 320 (505)
....++...| . |-+++-+.... .+....++..+.+.+. +..++.=.+.++..++.+.++|++++..-...
T Consensus 89 Av~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~--Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~p 166 (265)
T 1wv2_A 89 AVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKD--GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGL 166 (265)
T ss_dssp HHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHSCCSEEEECSSS
T ss_pred HHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCcc
Confidence 3334444444 2 67887664421 1223344444444444 55666336789999999999999999662110
Q ss_pred cceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 321 GSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 321 g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.-.|.|+.+...+..+.+ ..++|||++|||.++.|+++|+.+||++|++||.+..
T Consensus 167 -------IGsG~Gi~~~~lI~~I~e---~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 167 -------IGSGLGICNPYNLRIILE---EAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp -------TTCCCCCSCHHHHHHHHH---HCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred -------CCCCCCcCCHHHHHHHHh---cCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 001223444555555544 3579999999999999999999999999999999863
No 129
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.51 E-value=5.1e-07 Score=81.30 Aligned_cols=58 Identities=17% Similarity=0.256 Sum_probs=54.5
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+.+|+++|++ +++++.+++++.+|+++|.+++++.+||+|+ |+++|+||..|+++...
T Consensus 17 ~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~ 75 (170)
T 4esy_A 17 QVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSI 75 (170)
T ss_dssp TSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTC
T ss_pred CCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHh
Confidence 5689999999 9999999999999999999999999999999 99999999999988654
No 130
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.50 E-value=1.6e-07 Score=90.30 Aligned_cols=137 Identities=22% Similarity=0.374 Sum_probs=55.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC--C-CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEccC----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ--G-NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVGMG---- 319 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~--g-~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~~g---- 319 (505)
+..+.++.+.+.|++.+.+..-. + ......+.++.+++.+ ++|+++ |.+.+.+++..+.++|+|++.++..
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~d 114 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN 114 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhC
Confidence 46788999999999999875321 1 1223467888888887 789877 6889999999999999999987631
Q ss_pred C----------c--cee--e-c--------------------------ccccccCcChH-------------HHHHHHHH
Q 010640 320 S----------G--SIC--T-T--------------------------QEVCAVGRGQA-------------TAVYKVSS 345 (505)
Q Consensus 320 ~----------g--~~~--~-~--------------------------~~~~g~g~p~~-------------~~l~~v~~ 345 (505)
+ | .+. . . +.....|...+ ..+..+.+
T Consensus 115 p~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g~~~~~~~~ 194 (247)
T 3tdn_A 115 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF 194 (247)
T ss_dssp THHHHHHHHHHC--------------------------------------------------------------------
T ss_pred hHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCCCCHHHHHH
Confidence 0 0 000 0 0 00000110000 00111222
Q ss_pred HHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 346 IAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 346 ~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.++..++|||+.|||.++.|+.+++.+||++|++|++++.
T Consensus 195 i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 195 VRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ----------------------------------------
T ss_pred HHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 3333579999999999999999999999999999999864
No 131
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.49 E-value=4.3e-06 Score=78.95 Aligned_cols=109 Identities=20% Similarity=0.245 Sum_probs=88.4
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.++..+.++.+++.|++++.+.... ....+.++.+++.+|++.+.+|++.+.+.++.+.++|+|++..+.
T Consensus 28 ~~~~~~~~~al~~gGv~~iel~~k~---~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~------- 97 (224)
T 1vhc_A 28 ADDILPLADTLAKNGLSVAEITFRS---EAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG------- 97 (224)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS-------
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccC---chHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC-------
Confidence 4557889999999999999997543 245678888899998888889999999999999999999994321
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
.. .++.+.+++.++|+|. |+.|+.++.+|+.+|||.|.+
T Consensus 98 ---------~d----~~v~~~ar~~g~~~i~--Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 98 ---------LN----PKIVKLCQDLNFPITP--GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp ---------CC----HHHHHHHHHTTCCEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred ---------CC----HHHHHHHHHhCCCEEe--ccCCHHHHHHHHHCCCCEEEE
Confidence 01 1333455567899998 699999999999999999988
No 132
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.48 E-value=3.3e-08 Score=92.91 Aligned_cols=135 Identities=12% Similarity=0.083 Sum_probs=46.1
Q ss_pred cCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEec
Q 010640 104 RRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVP 180 (505)
Q Consensus 104 ~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~ 180 (505)
..++|..++ +++++++++.+++++|.+ ++ +||+|+ +|+++|+||.+|+.........+.+.+++. .+.+..
T Consensus 74 v~~im~~~~--~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGiit~~Dil~~~~~~~~~~~~~~~l-~~~~~~ 147 (213)
T 1vr9_A 74 VFNKVSLPD--FFVHEEDNITHALLLFLEHQEPYLPVVDE---EMRLKGAVSLHDFLEALIEALAMDVPGIRF-SVLLED 147 (213)
T ss_dssp SGGGCBCTT--CCEETTSBHHHHHHHHHHCCCSEEEEECT---TCBEEEEEEHHHHHHHHHHSCC---------------
T ss_pred HHHHccCCC--EEECCCCcHHHHHHHHHHhCCCEEEEEcC---CCEEEEEEEHHHHHHHHHHHhcCCCCcEEE-EEEeCC
Confidence 556788888 999999999999999988 76 999997 799999999999963222122234444431 111113
Q ss_pred CCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHc
Q 010640 181 ANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKA 259 (505)
Q Consensus 181 ~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~liea 259 (505)
...++.++.++|.+++++.++|++. |.- +...+...+. ..+..+.++.|.+.
T Consensus 148 ~~~~l~~~~~~l~~~~~~~l~V~~~~~~~--------------------------~~~~v~~~v~-~~~~~~i~~~le~~ 200 (213)
T 1vr9_A 148 KPGELRKVVDALALSNINILSVITTRSGD--------------------------GKREVLIKVD-AVDEGTLIKLFESL 200 (213)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccHHHHHHHHHHCCCcEEEEEEEecCC--------------------------CEEEEEEEEc-cCCHHHHHHHHHHC
Confidence 4456999999999999999998753 321 1112222322 22355667777778
Q ss_pred CccEEEEeCCCC
Q 010640 260 GVNVVVLDSSQG 271 (505)
Q Consensus 260 Gad~I~i~~~~g 271 (505)
|.+++.++..+|
T Consensus 201 g~~v~~~~~~~g 212 (213)
T 1vr9_A 201 GIKIESIEKEEG 212 (213)
T ss_dssp ------------
T ss_pred CCEEEEeecccC
Confidence 888877655544
No 133
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.48 E-value=1e-06 Score=84.77 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcC
Q 010640 182 NYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG 260 (505)
Q Consensus 182 ~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaG 260 (505)
..+..+..+.+.+.+.+.+.|.|- +...+.-..-++++.... ..+..+.+...+. ..+.++.+++.|
T Consensus 29 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~--------~~~ipvi~~ggI~----~~~~~~~~~~~G 96 (253)
T 1thf_D 29 SGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAE--------QIDIPFTVGGGIH----DFETASELILRG 96 (253)
T ss_dssp TTCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHT--------TCCSCEEEESSCC----SHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHH--------hCCCCEEEeCCCC----CHHHHHHHHHcC
Confidence 345677788999999999999875 432221111122222211 1112333433442 235688888999
Q ss_pred ccEEEEeCCC-CCchhHHHHHHHHHHhCC--CceEEEcc-------------------cCCHHHHHHHHHcCCCEEEEcc
Q 010640 261 VNVVVLDSSQ-GNSSFQIEMIKYAKKTYP--ELDVIGGN-------------------VVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 261 ad~I~i~~~~-g~~~~~~~~i~~l~~~~~--~~~Vi~g~-------------------V~t~e~a~~l~~aGad~I~v~~ 318 (505)
+|.+.+.... .++ +.+..+.+.+. .+.+.+.. ....+.++.+.++|++.|.+..
T Consensus 97 ad~V~lg~~~l~~p----~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~ 172 (253)
T 1thf_D 97 ADKVSINTAAVENP----SLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTS 172 (253)
T ss_dssp CSEEEESHHHHHCT----HHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEE
T ss_pred CCEEEEChHHHhCh----HHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEe
Confidence 9999884421 111 12333333321 11122211 1235668899999999886621
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.++.....| +.++.+..+ ++..++|||++|||.++.|+.+++..||++|++|+.|..
T Consensus 173 ------~~~~g~~~g-~~~~~~~~l---~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 173 ------IDRDGTKSG-YDTEMIRFV---RPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp ------TTTTTSCSC-CCHHHHHHH---GGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred ------ccCCCCCCC-CCHHHHHHH---HHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 011111112 234444433 344579999999999999999999999999999999864
No 134
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.48 E-value=1.1e-06 Score=88.37 Aligned_cols=132 Identities=21% Similarity=0.217 Sum_probs=91.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEccc------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGGNV------ 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g~V------ 297 (505)
++.+.++.+.++|.|.|.++..+|+ + ....+.++.+++.+ +.||.++--
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~ 223 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCC
Confidence 3566677888899999999986532 0 22578888889988 788877511
Q ss_pred --CC----HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHH
Q 010640 298 --VT----MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALV 371 (505)
Q Consensus 298 --~t----~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~ 371 (505)
.+ .+.++.+.++|+|+|.++.+... ......+.+ .....+..++ +..++|||+.|||.++.++.+++.
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~--~~~~~~~~~-~~~~~~~~ir---~~~~iPVi~~Ggi~s~~~a~~~l~ 297 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALV--HADINVFPG-YQVSFAEKIR---EQADMATGAVGMITDGSMAEEILQ 297 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSS--CCCCCCCTT-TTHHHHHHHH---HHHCCEEEECSSCCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccc--cCCCCCCcc-chHHHHHHHH---HHCCCCEEEECCCCCHHHHHHHHH
Confidence 12 34568888999999998643211 000000000 0233333333 345799999999999999999999
Q ss_pred hC-CCEEEecccccCC
Q 010640 372 LG-ASTVMMGSFLAGS 386 (505)
Q Consensus 372 lG-A~~V~~G~~f~~~ 386 (505)
.| ||+|++|+.|+..
T Consensus 298 ~G~aD~V~iGR~~i~n 313 (338)
T 1z41_A 298 NGRADLIFIGRELLRD 313 (338)
T ss_dssp TTSCSEEEECHHHHHC
T ss_pred cCCceEEeecHHHHhC
Confidence 99 9999999999753
No 135
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.47 E-value=1.5e-06 Score=83.16 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=91.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCC--------------
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLG-------------- 227 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~-------------- 227 (505)
..++.++|++ +++++.+++++.+|+++|.+++++++||+|+ |+++|+||..|+++........
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~ 83 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNIL 83 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHH
Confidence 5679999998 9999999999999999999999999999998 9999999999999876432100
Q ss_pred -----------CCccCCCCcceEEEeec-------------CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHH
Q 010640 228 -----------KGTVGPDGKWMVGAAIG-------------TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYA 283 (505)
Q Consensus 228 -----------~~~~d~~~~l~v~a~i~-------------~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l 283 (505)
.......+.+.+++... ...+..+....+++.++.++.+.........+. ...
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~---~~a 160 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEII---ELA 160 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHH---HHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHH---HHH
Confidence 00000111222221100 001245677788899999998855444443333 333
Q ss_pred HHhCCCceEEEcccCCHHHHHH
Q 010640 284 KKTYPELDVIGGNVVTMYQAQN 305 (505)
Q Consensus 284 ~~~~~~~~Vi~g~V~t~e~a~~ 305 (505)
++. +++++.....+...++.
T Consensus 161 ~~~--~~~~i~t~~d~~~~~~~ 180 (245)
T 3l2b_A 161 KKN--NITVITTPHDSFTASRL 180 (245)
T ss_dssp HHH--TCEEEECSSCHHHHHHH
T ss_pred HHc--CCeEEEeCCChHHHHHH
Confidence 344 78888866655555444
No 136
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.46 E-value=2.4e-07 Score=91.97 Aligned_cols=182 Identities=16% Similarity=0.145 Sum_probs=101.6
Q ss_pred CHHHHHHHHHHCCCCeeEEee----C-Ceeee--EEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHH
Q 010640 184 DLGQIDEVLEKNDVDFVVLEK----D-GERLD--VVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHL 256 (505)
Q Consensus 184 ~l~~a~~~l~~~~i~~lpVvd----~-g~l~G--iIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~l 256 (505)
+..+.++.+.+.+.+.+-+++ . +..-| .....++++..... ..+++...+... ..+.++.+
T Consensus 29 ~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~----------~~iPv~~k~r~g--~~~~~~~~ 96 (305)
T 2nv1_A 29 INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA----------VSIPVMAKARIG--HIVEARVL 96 (305)
T ss_dssp SSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH----------CSSCEEEEECTT--CHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh----------CCCCEEeccccc--chHHHHHH
Confidence 445777888888888876654 2 33333 22222333332110 012232332111 24667778
Q ss_pred HHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcc--eeec--c--c--
Q 010640 257 VKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGS--ICTT--Q--E-- 328 (505)
Q Consensus 257 ieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~--~~~~--~--~-- 328 (505)
.+.|+|.+...... ......+.++ ...+ +.++++ .+.+.+++..+.++|+|+|.+....|. ...+ . .
T Consensus 97 ~a~GAd~V~~~~~l-~~~~~~~~i~--~~~~-g~~v~~-~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~ 171 (305)
T 2nv1_A 97 EAMGVDYIDESEVL-TPADEEFHLN--KNEY-TVPFVC-GCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVN 171 (305)
T ss_dssp HHHTCSEEEECTTS-CCSCSSCCCC--GGGC-SSCEEE-EESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHH
T ss_pred HHCCCCEEEEeccC-CHHHHHHHHH--Hhcc-CCcEEE-EeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhh
Confidence 88999999632111 1111111111 1223 566666 677888888888999999988421110 0000 0 0
Q ss_pred -----cccc-----------CcChHHHHHHHHHHHhhcCCcEE--ecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 329 -----VCAV-----------GRGQATAVYKVSSIAAQSGVPVI--ADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 329 -----~~g~-----------g~p~~~~l~~v~~~~~~~~ipvI--a~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
..|. ..+.+..+..++ +..++||+ +.|||.++.|+.+++.+||++|++|+.|..
T Consensus 172 ~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~---~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~ 243 (305)
T 2nv1_A 172 AQVRKVVAMSEDELMTEAKNLGAPYELLLQIK---KDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFK 243 (305)
T ss_dssp HHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH---HHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred ccchhhccccchhhhcccccccccHHHHHHHH---HhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHc
Confidence 0000 112233343333 33578999 999999999999999999999999999864
No 137
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.46 E-value=1.7e-06 Score=87.12 Aligned_cols=131 Identities=21% Similarity=0.193 Sum_probs=90.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEccc------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGGNV------ 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g~V------ 297 (505)
++.+.++.+.++|.|.|.+|.++|+ + ....+.++.+++.+ +.||.++--
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCST
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccC
Confidence 3566677788899999999976521 1 12578888889888 778877411
Q ss_pred ------CCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHH
Q 010640 298 ------VTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALV 371 (505)
Q Consensus 298 ------~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~ 371 (505)
...+.++.+.++|+|+|.++.+.... .....+.+ -....+..+ .+..++|||+.|||.++.++.++|.
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~--~~~~~~~~-~~~~~~~~i---k~~~~iPVi~~GgI~s~e~a~~~L~ 297 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP--ARMNVYPG-YQVPFAELI---RREADIPTGAVGLITSGWQAEEILQ 297 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC--CCCCCCTT-TTHHHHHHH---HHHTTCCEEEESSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccC--CCCCCCcc-ccHHHHHHH---HHHcCCcEEeeCCCCCHHHHHHHHH
Confidence 13456888999999999986432111 00000111 122333333 3345799999999999999999999
Q ss_pred hC-CCEEEecccccC
Q 010640 372 LG-ASTVMMGSFLAG 385 (505)
Q Consensus 372 lG-A~~V~~G~~f~~ 385 (505)
.| ||+|++|+.|+.
T Consensus 298 ~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 298 NGRADLVFLGRELLR 312 (340)
T ss_dssp TTSCSEEEECHHHHH
T ss_pred CCCeeEEEecHHHHh
Confidence 99 999999999875
No 138
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.45 E-value=7.5e-08 Score=94.57 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=85.5
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCccee-----
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSIC----- 324 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~----- 324 (505)
.+.++.+.++|+|++ +.+.+.. ..+.++.+++.+.+.++++ ++.+.+++..+.++|+|+|.+.+.+|+..
T Consensus 90 ide~qil~aaGAD~I--d~s~~~~--~~~li~~i~~~~~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v 164 (297)
T 4adt_A 90 FVEAQILEELKVDML--DESEVLT--MADEYNHINKHKFKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAI 164 (297)
T ss_dssp HHHHHHHHHTTCSEE--EEETTSC--CSCSSCCCCGGGCSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHH
T ss_pred HHHHHHHHHcCCCEE--EcCCCCC--HHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHH
Confidence 567777889999999 4333311 1123333444333678877 68999999999999999998863322110
Q ss_pred -ec---------------cccccc---CcChHHHHHHHHHHHhhcCCcEE--ecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 325 -TT---------------QEVCAV---GRGQATAVYKVSSIAAQSGVPVI--ADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 325 -~~---------------~~~~g~---g~p~~~~l~~v~~~~~~~~ipvI--a~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
+. +.+..+ ..+.+..+..+++ ..++|++ +.|||.++.|+.+++.+||++|++|+.|
T Consensus 165 ~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~---~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai 241 (297)
T 4adt_A 165 KHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRK---LKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGI 241 (297)
T ss_dssp HHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHH---HTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHH
T ss_pred HHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHH---hcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHH
Confidence 00 000000 0233444444433 3567887 9999999999999999999999999998
Q ss_pred cCC
Q 010640 384 AGS 386 (505)
Q Consensus 384 ~~~ 386 (505)
..+
T Consensus 242 ~~a 244 (297)
T 4adt_A 242 FES 244 (297)
T ss_dssp HTS
T ss_pred HcC
Confidence 754
No 139
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.44 E-value=3.6e-06 Score=80.51 Aligned_cols=135 Identities=21% Similarity=0.301 Sum_probs=94.7
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCC---CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEccCC--
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQG---NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVGMGS-- 320 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g---~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~~g~-- 320 (505)
++..+.++.+.+.|++.++++...+ ......+.++.+++.+ ++|+++ +.+.+.+.++.+.++|+|++.++...
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 3577888999999999988764222 1224577888888886 788876 67889999999999999999875210
Q ss_pred ------------c--ce---------------e---------ecc-c-------------------ccccC-cChHHHHH
Q 010640 321 ------------G--SI---------------C---------TTQ-E-------------------VCAVG-RGQATAVY 341 (505)
Q Consensus 321 ------------g--~~---------------~---------~~~-~-------------------~~g~g-~p~~~~l~ 341 (505)
| .+ . .+. . ..+.+ .+..+.+.
T Consensus 112 ~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~ 191 (253)
T 1h5y_A 112 NPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIR 191 (253)
T ss_dssp CTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHH
T ss_pred CcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHH
Confidence 0 00 0 000 0 00110 11233444
Q ss_pred HHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 342 KVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 342 ~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.+++ ..++||+++|||.++.|+.+++.+||++|++|+.|..
T Consensus 192 ~l~~---~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 192 RVAD---SVRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHH---HCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHH---hcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 4433 3479999999999999999999999999999999864
No 140
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.44 E-value=3.3e-07 Score=70.12 Aligned_cols=48 Identities=21% Similarity=0.281 Sum_probs=44.3
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
+++++.+++++.+|+++|.++++..+||+|+|+++||||..|+++...
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTT
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHH
Confidence 367899999999999999999999999999999999999999987643
No 141
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.44 E-value=1.5e-06 Score=87.96 Aligned_cols=133 Identities=25% Similarity=0.266 Sum_probs=90.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCC-CceEEEccc-----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYP-ELDVIGGNV----- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~-~~~Vi~g~V----- 297 (505)
++.+.++.+.++|.|.|.+|.++|+ + +...+.++.+|+.++ +.||.++--
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~ 232 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWG 232 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence 3666677888899999999987631 1 124778888888874 567776311
Q ss_pred ---CCHH----HHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHH
Q 010640 298 ---VTMY----QAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKAL 370 (505)
Q Consensus 298 ---~t~e----~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal 370 (505)
.+.+ .++.|.++|+|+|.++.|+..... ....+.+ .....+..++ +..++|||+.|||.++.++.+++
T Consensus 233 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~-~~~~~~~-~~~~~~~~ir---~~~~iPVi~~Ggi~t~e~a~~~l 307 (349)
T 3hgj_A 233 EGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRV-RIPLAPG-FQVPFADAVR---KRVGLRTGAVGLITTPEQAETLL 307 (349)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSS-CCCCCTT-TTHHHHHHHH---HHHCCEEEECSSCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCccc-ccCCCcc-ccHHHHHHHH---HHcCceEEEECCCCCHHHHHHHH
Confidence 1333 477888999999998743211110 0000001 1223333333 33579999999999999999999
Q ss_pred HhC-CCEEEecccccC
Q 010640 371 VLG-ASTVMMGSFLAG 385 (505)
Q Consensus 371 ~lG-A~~V~~G~~f~~ 385 (505)
..| ||+|++|+.|+.
T Consensus 308 ~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 308 QAGSADLVLLGRVLLR 323 (349)
T ss_dssp HTTSCSEEEESTHHHH
T ss_pred HCCCceEEEecHHHHh
Confidence 999 999999999875
No 142
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.42 E-value=8.8e-07 Score=94.35 Aligned_cols=188 Identities=13% Similarity=0.175 Sum_probs=113.6
Q ss_pred cCCcccc--CCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCce-
Q 010640 104 RRVPIFS--SSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNV- 177 (505)
Q Consensus 104 ~~~~~~~--~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~- 177 (505)
..++|.. ++ +++++++++.++.++|.+ ++ +||+|+ +|+++|+||.+|+...........+ +.. .+.
T Consensus 175 v~~vm~~~~~~--~tv~~~~~l~ea~~~m~~~~~~~lpVVd~---~g~lvGiIt~~Dll~~~~~~~~~~~-~~~--rl~v 246 (514)
T 1jcn_A 175 LSEVMTPRIEL--VVAPAGVTLKEANEILQRSKKGKLPIVND---CDELVAIIARTDLKKNRDYPLASKD-SQK--QLLC 246 (514)
T ss_dssp ------CCBCC--CCEETTCCSTTTTTHHHHHTCSCCCEESS---SSCCC----CCCCSSCCCCTTCCBC-TTS--CBCC
T ss_pred HHHHhCCCCCC--eEECCCCCHHHHHHHHHHcCCCcccEECC---CCeEEEEEEHHHHHHHhhCcchhcc-cCC--ceee
Confidence 4456766 77 899999999999999998 76 999998 8999999999999633221111222 222 221
Q ss_pred --EecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEE-eecCCccHHHH
Q 010640 178 --SVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGA-AIGTRESDKER 252 (505)
Q Consensus 178 --~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a-~i~~~~~~~e~ 252 (505)
.+.......+.++.+.+.+.+.+-+ +- |.... ..++++.... .-+.+.+.+ .+. ..+.
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v~i-~~~~G~~~~---~~~~i~~i~~---------~~~~~pvi~~~v~----t~~~ 309 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVIVL-DSSQGNSVY---QIAMVHYIKQ---------KYPHLQVIGGNVV----TAAQ 309 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEE-CCSCCCSHH---HHHHHHHHHH---------HCTTCEEEEEEEC----SHHH
T ss_pred eeEecCchhhHHHHHHHHHcCCCEEEe-eccCCcchh---HHHHHHHHHH---------hCCCCceEecccc----hHHH
Confidence 1233344667777788888875443 22 32100 0122332211 101233433 332 3467
Q ss_pred HHHHHHcCccEEEEeCCCC------------C-chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 253 LEHLVKAGVNVVVLDSSQG------------N-SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g------------~-~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
++.+.++|+|++.+....| . ....+..+..+++.+ ++||++ |++.+.+++.++..+|||++.++
T Consensus 310 a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GAd~V~iG 387 (514)
T 1jcn_A 310 AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGASTVMMG 387 (514)
T ss_dssp HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCCCeeeEC
Confidence 8889999999998832111 1 123456666666665 789987 89999999999999999999886
No 143
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.42 E-value=3.1e-06 Score=81.56 Aligned_cols=177 Identities=14% Similarity=0.101 Sum_probs=113.3
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
.+ .+..+..+.+.+.|...+-|+++ +.+-|-. .++-..... -.+++-...... ....+..+.+
T Consensus 63 ~~-~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~--~~l~~i~~~-----------v~lPvl~kdfI~--d~~qi~~a~~ 126 (254)
T 1vc4_A 63 RE-VDPVEAALAYARGGARAVSVLTEPHRFGGSL--LDLKRVREA-----------VDLPLLRKDFVV--DPFMLEEARA 126 (254)
T ss_dssp CS-CCHHHHHHHHHHTTCSEEEEECCCSSSCCCH--HHHHHHHHH-----------CCSCEEEESCCC--SHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHcCCCEEEEecchhhhccCH--HHHHHHHHh-----------cCCCEEECCcCC--CHHHHHHHHH
Confidence 44 57788889999999999999987 7666632 333222211 012222222112 2234666888
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
.|+|.+.+....-. ....+++...++. +..+++ .+.+.+++..+.++|+|.|-+.+ +.....+ +.+.
T Consensus 127 ~GAD~VlL~~~~l~-~~l~~l~~~a~~l--Gl~~lv-ev~~~~E~~~a~~~gad~IGvn~--------~~l~~~~-~dl~ 193 (254)
T 1vc4_A 127 FGASAALLIVALLG-ELTGAYLEEARRL--GLEALV-EVHTERELEIALEAGAEVLGINN--------RDLATLH-INLE 193 (254)
T ss_dssp TTCSEEEEEHHHHG-GGHHHHHHHHHHH--TCEEEE-EECSHHHHHHHHHHTCSEEEEES--------BCTTTCC-BCTT
T ss_pred cCCCEEEECccchH-HHHHHHHHHHHHC--CCeEEE-EECCHHHHHHHHHcCCCEEEEcc--------ccCcCCC-CCHH
Confidence 99999988543211 2344444444444 666665 67889999999999999885532 1122222 2233
Q ss_pred HHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 339 AVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 339 ~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
.+.++.+..... ++|+|+.|||.++.|+.++.. ||++|.+|+.|...
T Consensus 194 ~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 194 TAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp HHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred HHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 334444443321 689999999999999999999 99999999998643
No 144
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.41 E-value=3.1e-06 Score=81.35 Aligned_cols=178 Identities=18% Similarity=0.173 Sum_probs=105.1
Q ss_pred CCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcC
Q 010640 182 NYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG 260 (505)
Q Consensus 182 ~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaG 260 (505)
..+..+.++.+.+.+.+.+++.|- ....+.-..-++++.... ..+..++++..+. ..+.++.+++.|
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~--------~~~iPvi~~Ggi~----~~~~~~~~~~~G 97 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAE--------RVFIPLTVGGGVR----SLEDARKLLLSG 97 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHT--------TCCSCEEEESSCC----SHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHH--------hCCCCEEEECCcC----CHHHHHHHHHcC
Confidence 346778888999999999999974 211111111112222211 1122333433442 346788888899
Q ss_pred ccEEEEeCCC-CCchhHHHHHHHHHHhCC-C-ceEEEcc-------------------cCCHHHHHHHHHcCCCEEEEcc
Q 010640 261 VNVVVLDSSQ-GNSSFQIEMIKYAKKTYP-E-LDVIGGN-------------------VVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 261 ad~I~i~~~~-g~~~~~~~~i~~l~~~~~-~-~~Vi~g~-------------------V~t~e~a~~l~~aGad~I~v~~ 318 (505)
+|.+.+.... ..+ +.++.+.+.+. + +.+.+.. ..+.+.++.+.+.|++.+.+..
T Consensus 98 ad~V~lg~~~l~~p----~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~ 173 (252)
T 1ka9_F 98 ADKVSVNSAAVRRP----ELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTS 173 (252)
T ss_dssp CSEEEECHHHHHCT----HHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEE
T ss_pred CCEEEEChHHHhCc----HHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEec
Confidence 9999884321 111 22333434331 1 2222210 1236778999999999886521
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.++.....| +.++.+.++++ ..++|||+.|||.++.|+.+++..||++|++|+.|..
T Consensus 174 ------~~~~g~~~g-~~~~~i~~l~~---~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 174 ------MDRDGTKEG-YDLRLTRMVAE---AVGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp ------TTTTTTCSC-CCHHHHHHHHH---HCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred ------ccCCCCcCC-CCHHHHHHHHH---HcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc
Confidence 011111112 23455544443 4579999999999999999999999999999999864
No 145
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.41 E-value=1.8e-06 Score=81.45 Aligned_cols=118 Identities=19% Similarity=0.191 Sum_probs=77.4
Q ss_pred HHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeeccccccc
Q 010640 253 LEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAV 332 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~ 332 (505)
++.+.+.|+|.+.++.... ..+ .+++.+++..+.+ ++.+.+++..+.+.|+|+|.++.. ..+....|.
T Consensus 81 ~~~a~~~gad~v~l~~~~~----~~~---~~~~~~~~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~----f~~~~~~g~ 148 (221)
T 1yad_A 81 VDIALFSTIHRVQLPSGSF----SPK---QIRARFPHLHIGR-SVHSLEEAVQAEKEDADYVLFGHV----FETDCKKGL 148 (221)
T ss_dssp HHHHHTTTCCEEEECTTSC----CHH---HHHHHCTTCEEEE-EECSHHHHHHHHHTTCSEEEEECC----C--------
T ss_pred HHHHHHcCCCEEEeCCCcc----CHH---HHHHHCCCCEEEE-EcCCHHHHHHHHhCCCCEEEECCc----cccCCCCCC
Confidence 4667789999998854321 123 3344443455544 678999999999999999987531 111111110
Q ss_pred CcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 333 GRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 333 g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
....+..+ .+.++..++||+++||| ++.++.+++.+||++|.+|+.|..+
T Consensus 149 ~~~~~~~l---~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 149 EGRGVSLL---SDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp --CHHHHH---HHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred CCCCHHHH---HHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhCC
Confidence 01122333 33333457999999999 9999999999999999999998654
No 146
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.39 E-value=8.3e-07 Score=93.87 Aligned_cols=187 Identities=18% Similarity=0.190 Sum_probs=70.2
Q ss_pred cCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEec
Q 010640 104 RRVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVP 180 (505)
Q Consensus 104 ~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~ 180 (505)
..++|..++ +++++++++.+++++|.+ ++ +||+|+ +++++|+||.+|+...........+.+...--...+.
T Consensus 152 v~~im~~~~--~~v~~~~~l~eal~~m~~~~~~~lpVVde---~g~lvGiiT~~Dil~~~~~~~~~~~~~g~~~v~~~~~ 226 (486)
T 2cu0_A 152 VKELMTKEV--ITVPESIEVEEALKIMIENRIDRLPVVDE---RGKLVGLITMSDLVARKKYKNAVRDENGELLVAAAVS 226 (486)
T ss_dssp ------------------------------------------------------------CCTTCCBCTTSCBCCEEEEC
T ss_pred HHHHccCCC--eEECCcCcHHHHHHHHHHcCCCEEEEEec---CCeEEEEEEHHHHHHhhhccccccccCCceeecceec
Confidence 345666677 899999999999999999 66 999998 8999999999999743321111222111100001233
Q ss_pred CCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 181 ANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 181 ~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
. .. .+.+.++.+.+++.+ |++. |...++++.-..++... ....+.-.++. .+.+..+.
T Consensus 227 ~-~~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L~~I~~l~~~~------------~vpvi~k~v~~----~~~a~~l~- 286 (486)
T 2cu0_A 227 P-FD-IKRAIELDKAGVDVI-VVDTAHAHNLKAIKSMKEMRQKV------------DADFIVGNIAN----PKAVDDLT- 286 (486)
T ss_dssp T-TC-HHHHHHHHHTTCSEE-EEECSCCCCHHHHHHHHHHHHTC------------CSEEEEEEECC----HHHHTTCT-
T ss_pred h-hh-HHHHHHHHHhcCCce-EEEecCCcEeehhhHHHHHHHHh------------CCccccCCcCC----HHHHHHhh-
Confidence 3 33 566778888898865 6664 56555544322222210 01123333432 23344444
Q ss_pred cCccEEEEeCCC------------CCc-hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 259 AGVNVVVLDSSQ------------GNS-SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 259 aGad~I~i~~~~------------g~~-~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
|+|.+.+.... |.+ ...+..+..+.+.+ ++|||+ |++.+..++.+++.+|||++.++
T Consensus 287 -G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~v~~g 357 (486)
T 2cu0_A 287 -FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADAVMLG 357 (486)
T ss_dssp -TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred -CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCceeeC
Confidence 99999883211 111 12233344444444 789987 78899999988999999999886
No 147
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.39 E-value=3.2e-06 Score=81.94 Aligned_cols=179 Identities=14% Similarity=0.125 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHCCCCeeEEeeC-C--eeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcC
Q 010640 184 DLGQIDEVLEKNDVDFVVLEKD-G--ERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG 260 (505)
Q Consensus 184 ~l~~a~~~l~~~~i~~lpVvd~-g--~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaG 260 (505)
+..+.++.+.+.+.+.+-+.|- . .-.|. .-++++.... .....++++..+.+ .+.++.+.+.|
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~--~~~~i~~i~~--------~~~iPvi~~ggi~~----~~~i~~~~~~G 96 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGY--DTEMIRFVRP--------LTTLPIIASGGAGK----MEHFLEAFLAG 96 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCC--CHHHHHHHGG--------GCCSCEEEESCCCS----THHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcc--cHHHHHHHHH--------hcCCCEEEECCCCC----HHHHHHHHHcC
Confidence 4677888899999999999874 2 22221 1233333211 11223444434432 24566777889
Q ss_pred ccEEEEeCCCCCchhHHHHHHHHHHhCC--CceEEEc-cc--------------------CCHHHHHHHHHcCCCEEEEc
Q 010640 261 VNVVVLDSSQGNSSFQIEMIKYAKKTYP--ELDVIGG-NV--------------------VTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 261 ad~I~i~~~~g~~~~~~~~i~~l~~~~~--~~~Vi~g-~V--------------------~t~e~a~~l~~aGad~I~v~ 317 (505)
+|.+.+....-......+.++.+.+.+. .-.++++ .+ ...+.++.+.++|++.|.+.
T Consensus 97 ad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t 176 (266)
T 2w6r_A 97 ADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLT 176 (266)
T ss_dssp CSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEE
T ss_pred CcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEE
Confidence 9999885432200001123333322221 1111111 11 12466788999999999763
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
. .++.....| +.+..+. +.++..++|||+.|||.++.|+.+++.+||++|++|+.|...
T Consensus 177 ~------~~~~g~~~g-~~~~~i~---~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~ 235 (266)
T 2w6r_A 177 S------IDRDGTKSG-YDTEMIR---FVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 235 (266)
T ss_dssp E------TTTTTTCSC-CCHHHHH---HHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--
T ss_pred e------ecCCCCcCC-CCHHHHH---HHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcC
Confidence 1 011111112 2344443 344456899999999999999999999999999999998643
No 148
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.38 E-value=6.8e-06 Score=78.83 Aligned_cols=135 Identities=20% Similarity=0.139 Sum_probs=89.6
Q ss_pred cHHHHHHHHHHcCccEEEEeCC------CCC---------------chhHHHHHHHHHHhCCCceEEEcccCC-------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSS------QGN---------------SSFQIEMIKYAKKTYPELDVIGGNVVT------- 299 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~------~g~---------------~~~~~~~i~~l~~~~~~~~Vi~g~V~t------- 299 (505)
...+.++.+.+. +|.++++.+ .|. .....+.++.+++.+ ++||.+....+
T Consensus 20 ~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~ 97 (248)
T 1geq_A 20 STLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIYRAGV 97 (248)
T ss_dssp HHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHHHHHHCH
T ss_pred HHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccchhhhcCH
Confidence 567778888888 999999833 231 122367888888876 67887755333
Q ss_pred HHHHHHHHHcCCCEEEEccCCc--------------c-----eee-ccc------------------cccc-CcC---hH
Q 010640 300 MYQAQNLIEAGVDGLRVGMGSG--------------S-----ICT-TQE------------------VCAV-GRG---QA 337 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~~g~g--------------~-----~~~-~~~------------------~~g~-g~p---~~ 337 (505)
.+.++.+.++|+|++.+..-+. . ... +.. ..|. |.. ..
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~ 177 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPK 177 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CCCH
T ss_pred HHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCCh
Confidence 4788899999999999863110 0 000 000 0110 110 02
Q ss_pred HHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 338 TAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 338 ~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
..+..+.+..+..++||+++|||.++.++.+++.+||++|.+|+.+.
T Consensus 178 ~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~ 224 (248)
T 1geq_A 178 TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALV 224 (248)
T ss_dssp HHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred hHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 22333444444457999999999999999999999999999999885
No 149
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.34 E-value=1e-05 Score=75.84 Aligned_cols=109 Identities=22% Similarity=0.253 Sum_probs=89.5
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.++..+.++.+++.|++++.+.... ....+.++.+++.++++.+.+|++.+.++++.+.++|+|++..+.
T Consensus 27 ~~~~~~~~~al~~gGv~~iel~~k~---~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~------- 96 (214)
T 1wbh_A 27 LEHAVPMAKALVAGGVRVLNVTLRT---ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG------- 96 (214)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEESCS---TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS-------
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCC---hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC-------
Confidence 4557889999999999999997543 234678888889988888889999999999999999999995431
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
. . .++.+.++..++|+|. |+.|+.++.+|+.+|||.|.+
T Consensus 97 ---~------d----~~v~~~~~~~g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 97 ---L------T----EPLLKAATEGTIPLIP--GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp ---C------C----HHHHHHHHHSSSCEEE--EESSHHHHHHHHHTTCCEEEE
T ss_pred ---C------C----HHHHHHHHHhCCCEEE--ecCCHHHHHHHHHCCCCEEEE
Confidence 0 0 2445666678899999 799999999999999999988
No 150
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.30 E-value=1.4e-05 Score=75.64 Aligned_cols=119 Identities=19% Similarity=0.191 Sum_probs=81.2
Q ss_pred HHHHHHHHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCCCceEEEcc-----cCCH----HHHHHHHHcCCCEEEE
Q 010640 251 ERLEHLVKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYPELDVIGGN-----VVTM----YQAQNLIEAGVDGLRV 316 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~~~~Vi~g~-----V~t~----e~a~~l~~aGad~I~v 316 (505)
..++.+++.|+|.+.+.... +....+.+.++.+++..+ |+++|- -.+. +.++.+.++|+|+|..
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~--pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t 151 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP--SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT 151 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT--TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc--CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 44567788999999864432 333456677888888763 444432 1243 3477888899999966
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSF 382 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~ 382 (505)
+.|.. .|..+...+..+++... .++||+++|||+++.|+.+.+.+||+.|++++.
T Consensus 152 stg~~----------~gga~~~~i~~v~~~v~-~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 152 STGFA----------PRGTTLEEVRLIKSSAK-GRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp CCSCS----------SSCCCHHHHHHHHHHHT-TSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred CCCCC----------CCCCCHHHHHHHHHHhC-CCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 53210 11234556666655432 269999999999999999999999998777754
No 151
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.29 E-value=6.3e-07 Score=79.81 Aligned_cols=59 Identities=7% Similarity=0.014 Sum_probs=55.1
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
.++.++|+|+++++++.+++++.+|+++|.++++.++||+|+ |+++|+||..|+++...
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~ 74 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhh
Confidence 468899999889999999999999999999999999999999 99999999999987653
No 152
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.28 E-value=1e-05 Score=75.57 Aligned_cols=123 Identities=24% Similarity=0.272 Sum_probs=83.9
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCCH-HHHHHHHHcCCCEEEEccCCcceeec
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVTM-YQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t~-e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
...++.+.++|+|.+.++...+ .....+.++.+++. +.++++ -++.+. +.++.+.+.|+|+|.+..|.++
T Consensus 67 ~~~~~~~~~~Gad~v~v~~~~~-~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g---- 139 (211)
T 3f4w_A 67 HFESQLLFDAGADYVTVLGVTD-VLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQ---- 139 (211)
T ss_dssp HHHHHHHHHTTCSEEEEETTSC-HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHH----
T ss_pred HHHHHHHHhcCCCEEEEeCCCC-hhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcc----
Confidence 3448889999999999976532 12335566666666 677664 234454 6689999999999876422110
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.. .+...+..+..+++.. .++|++++|||. +.++.+++.+||++|.+|+.+..
T Consensus 140 ~~---~~~~~~~~i~~l~~~~--~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 140 QA---AGRKPIDDLITMLKVR--RKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp HH---TTCCSHHHHHHHHHHC--SSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHT
T ss_pred cc---cCCCCHHHHHHHHHHc--CCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcC
Confidence 00 1112344454444432 269999999995 99999999999999999999864
No 153
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.27 E-value=2.7e-06 Score=80.83 Aligned_cols=88 Identities=16% Similarity=0.181 Sum_probs=61.9
Q ss_pred CceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcC-CcEEecCCCCCHHHHH
Q 010640 289 ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSG-VPVIADGGISNSGHIV 367 (505)
Q Consensus 289 ~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~-ipvIa~GGI~~~~di~ 367 (505)
+..++.-...++..++.+.++|+++|.--... .-+|.|+.+...+..+.+. ..+ +|||.+|||.++.|++
T Consensus 124 Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~p-------IGsG~Gi~~~~~L~~i~~~--~~~~vPVI~~GGI~tpsDAa 194 (268)
T 2htm_A 124 DFLVLPYMGPDLVLAKRLAALGTATVMPLAAP-------IGSGWGVRTRALLELFARE--KASLPPVVVDAGLGLPSHAA 194 (268)
T ss_dssp TCEECCEECSCHHHHHHHHHHTCSCBEEBSSS-------TTTCCCSTTHHHHHHHHHT--TTTSSCBEEESCCCSHHHHH
T ss_pred CCEEeeccCCCHHHHHHHHhcCCCEEEecCcc-------CcCCcccCCHHHHHHHHHh--cCCCCeEEEeCCCCCHHHHH
Confidence 33444223578899999999999999552110 0012344444444444331 346 9999999999999999
Q ss_pred HHHHhCCCEEEecccccC
Q 010640 368 KALVLGASTVMMGSFLAG 385 (505)
Q Consensus 368 kal~lGA~~V~~G~~f~~ 385 (505)
+|+.+||++|++||.+..
T Consensus 195 ~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 195 EVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp HHHHTTCCEEEESHHHHT
T ss_pred HHHHcCCCEEEEChHHhC
Confidence 999999999999999874
No 154
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.26 E-value=1.3e-05 Score=75.78 Aligned_cols=109 Identities=18% Similarity=0.251 Sum_probs=89.1
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.++..+.++.+++.|++++.+.... ....+.++.+++.+|++.+.+|++.+.+.++.+.++|+|++..+.
T Consensus 37 ~~~~~~~~~al~~gGv~~iel~~k~---~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~------- 106 (225)
T 1mxs_A 37 EEDILPLADALAAGGIRTLEVTLRS---QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG------- 106 (225)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEESSS---THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS-------
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCC---ccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC-------
Confidence 4457889999999999999997542 245677888888988889999999999999999999999994321
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
. . .++.++++..++|+|. |+.|+.++.+|+.+|||.|.+
T Consensus 107 ---~------d----~~v~~~~~~~g~~~i~--G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 107 ---I------T----EDILEAGVDSEIPLLP--GISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp ---C------C----HHHHHHHHHCSSCEEC--EECSHHHHHHHHTTTCCEEEE
T ss_pred ---C------C----HHHHHHHHHhCCCEEE--eeCCHHHHHHHHHCCCCEEEE
Confidence 0 0 1345666668899998 799999999999999999988
No 155
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.26 E-value=3.2e-06 Score=74.01 Aligned_cols=106 Identities=16% Similarity=0.107 Sum_probs=74.8
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceE
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMV 239 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v 239 (505)
...++.++|+++.+++++++++++.++++.|.+++...+||+|+ |+++|+||..|+++....... .+..+.-.. .+
T Consensus 21 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~-~~v~~~m~~-~~ 98 (148)
T 3lv9_A 21 EEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENK-IELEEILRD-II 98 (148)
T ss_dssp GTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSC-CCGGGTCBC-CE
T ss_pred CCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCC-ccHHHhcCC-Ce
Confidence 45689999998778999999999999999999999999999987 799999999999987432100 001111111 12
Q ss_pred EEeecCCccHHHHHHHHHHcCccEEEEeCCCC
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVVVLDSSQG 271 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g 271 (505)
. +.......+.++.+.+.+...+.+....|
T Consensus 99 ~--v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g 128 (148)
T 3lv9_A 99 Y--ISENLTIDKALERIRKEKLQLAIVVDEYG 128 (148)
T ss_dssp E--EETTSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred E--ECCCCCHHHHHHHHHhcCCeEEEEEeCCC
Confidence 1 22233466777777777877765543333
No 156
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.26 E-value=4.2e-06 Score=85.04 Aligned_cols=133 Identities=19% Similarity=0.179 Sum_probs=88.6
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCC-CceEEEccc-----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYP-ELDVIGGNV----- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~-~~~Vi~g~V----- 297 (505)
++.+.++.+.++|.|.|.+|.++|+ + +...+.++.+++.++ +.||.++--
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 3566677788899999999976531 1 124678888888874 567766310
Q ss_pred ----CC----HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHH
Q 010640 298 ----VT----MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKA 369 (505)
Q Consensus 298 ----~t----~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~ka 369 (505)
.+ .+.++.|.++|+|+|.++.+........ ..+-+ .....+..+++ ..++|||+.|||.++.++.++
T Consensus 239 ~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~-~~~~~-~~~~~~~~ir~---~~~iPVi~~GgI~s~e~a~~~ 313 (363)
T 3l5l_A 239 GRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNI-PWGPA-FMGPIAERVRR---EAKLPVTSAWGFGTPQLAEAA 313 (363)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCC-CCCTT-TTHHHHHHHHH---HHTCCEEECSSTTSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccccccc-CCCcc-hhHHHHHHHHH---HcCCcEEEeCCCCCHHHHHHH
Confidence 12 2346788899999999874321100000 00101 12233333333 357999999999999999999
Q ss_pred HHhC-CCEEEecccccC
Q 010640 370 LVLG-ASTVMMGSFLAG 385 (505)
Q Consensus 370 l~lG-A~~V~~G~~f~~ 385 (505)
+..| ||+|++|+.|+.
T Consensus 314 l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 314 LQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHTTSCSEEECCHHHHH
T ss_pred HHCCCccEEEecHHHHh
Confidence 9999 999999999875
No 157
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.24 E-value=1.6e-05 Score=77.23 Aligned_cols=135 Identities=19% Similarity=0.225 Sum_probs=89.0
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCc---------------------hhHHHHHHHHHHhCCCceEEE---cc-c---C
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNS---------------------SFQIEMIKYAKKTYPELDVIG---GN-V---V 298 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~---------------------~~~~~~i~~l~~~~~~~~Vi~---g~-V---~ 298 (505)
+...+.++.+.++|+|+++++.+...+ ....+.++.+|+.++++|++. -+ + .
T Consensus 31 ~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g 110 (268)
T 1qop_A 31 EQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNG 110 (268)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhh
Confidence 346678888999999999998855322 123467888888844788754 12 1 1
Q ss_pred CHHHHHHHHHcCCCEEEEccCC-cc---------------e---ee-cc---------------------cccccCcC--
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGS-GS---------------I---CT-TQ---------------------EVCAVGRG-- 335 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~-g~---------------~---~~-~~---------------------~~~g~g~p-- 335 (505)
....++.+.++|+|++.+.--+ .. + .. +. ..+|...+
T Consensus 111 ~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~ 190 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGA 190 (268)
T ss_dssp HHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC-
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCC
Confidence 2567788999999988764211 00 0 00 00 01111111
Q ss_pred --hHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 336 --QATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 336 --~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
....+..+++ ..++||+.+|||.++.++.+++..|||+|.+||.|.
T Consensus 191 ~~~~~~i~~lr~---~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 191 LPLHHLIEKLKE---YHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp -CCHHHHHHHHH---TTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred chHHHHHHHHHh---ccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 2334444433 347999999999999999999999999999999985
No 158
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.23 E-value=3.5e-06 Score=72.01 Aligned_cols=100 Identities=13% Similarity=0.036 Sum_probs=71.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVG 240 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~ 240 (505)
+.+++++|++..+++++++++++.+++++|.+++..++||+|+ |+++|+||..|+++....... ...+.-.. .+
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~--~v~~~m~~-~~- 79 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPAL--DIRSLVRP-AV- 79 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTS--CGGGGCBC-CC-
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCc--CHHHHhCC-Ce-
Confidence 4578999995448899999999999999999999999999986 799999999999987642211 01111011 11
Q ss_pred EeecCCccHHHHHHHHHHcCccEEEEe
Q 010640 241 AAIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 241 a~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
.+.......+.++.+.+.+...+.+-
T Consensus 80 -~v~~~~~l~~~~~~m~~~~~~~~pVv 105 (129)
T 3jtf_A 80 -FIPEVKRLNVLLREFRASRNHLAIVI 105 (129)
T ss_dssp -EEETTCBHHHHHHHHHTSSCCEEEEE
T ss_pred -EeCCCCcHHHHHHHHHhcCCeEEEEE
Confidence 12223346667777777777776553
No 159
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.21 E-value=7.2e-07 Score=85.10 Aligned_cols=127 Identities=17% Similarity=0.235 Sum_probs=82.9
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHH-hCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCc--ceeec
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK-TYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSG--SICTT 326 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~-~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g--~~~~~ 326 (505)
...++.+.+.|+|+| |-+...+. .+.+..+.+ .| ++|+++ ++.+.++|...++.|++.|..-..+| .+.-.
T Consensus 80 ~~EAqilea~GaD~I--Desevltp--ad~~~~I~k~~f-~vpfv~-~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~a 153 (291)
T 3o07_A 80 FVEAQIIEALEVDYI--DESEVLTP--ADWTHHIEKDKF-KVPFVC-GAKDLGEALRRINEGAAMIRTKGEAGTGDVSEA 153 (291)
T ss_dssp HHHHHHHHHTTCSEE--EEETTSCC--SCSSCCCCGGGC-SSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCTHHH
T ss_pred HHHHHHHHHcCCCEE--ecccCCCH--HHHHHHhhhhcC-CCcEEe-eCCCHHHHHHHHHCCCCEEEecCcCCCccHHHH
Confidence 567788888999998 54433211 112222223 33 788877 78999999999999999997632222 11000
Q ss_pred -----------cccccc------------CcChHHHHHHHHHHHhhcCCcE--EecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 327 -----------QEVCAV------------GRGQATAVYKVSSIAAQSGVPV--IADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 327 -----------~~~~g~------------g~p~~~~l~~v~~~~~~~~ipv--Ia~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
+.+.+. -.+....+.++.+ ..++|| |+.|||.|+.|+.+++.+|||+|++|+
T Consensus 154 v~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike---~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGr 230 (291)
T 3o07_A 154 VKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLE---KGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGS 230 (291)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHH---HTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHH---ccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEch
Confidence 001111 0133444444433 356888 568999999999999999999999999
Q ss_pred cccC
Q 010640 382 FLAG 385 (505)
Q Consensus 382 ~f~~ 385 (505)
.+..
T Consensus 231 AI~~ 234 (291)
T 3o07_A 231 GIFK 234 (291)
T ss_dssp GGGG
T ss_pred HHhC
Confidence 8764
No 160
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.20 E-value=1e-05 Score=78.50 Aligned_cols=126 Identities=20% Similarity=0.215 Sum_probs=79.5
Q ss_pred HHHHHHHHc-CccEEEEeCCCCC---chhHHHHHHHHHHhC-CCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 251 ERLEHLVKA-GVNVVVLDSSQGN---SSFQIEMIKYAKKTY-PELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 251 e~~~~liea-Gad~I~i~~~~g~---~~~~~~~i~~l~~~~-~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
..++.+.++ +.+++.++..... .....+.++..++.+ ++..++.-.+.+.+.++.+.+.|+|+| ++.++- +..
T Consensus 83 ~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v-~~~~~~-~Gt 160 (264)
T 1xm3_A 83 RIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAI-MPGASP-IGS 160 (264)
T ss_dssp HHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCB-EECSSS-TTC
T ss_pred HHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEE-EECCcc-cCC
Confidence 345555555 5667666542211 122345555555542 234444334567889999999999998 331110 000
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
. .+......+..+++ ..++||++.|||.++.|+.+++.+|||+|.+|+.|..+
T Consensus 161 ~-----~~~~~~~~l~~i~~---~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a 213 (264)
T 1xm3_A 161 G-----QGILNPLNLSFIIE---QAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGA 213 (264)
T ss_dssp C-----CCCSCHHHHHHHHH---HCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred C-----CCCCCHHHHHHHHh---cCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 0 12223445555544 35799999999999999999999999999999998754
No 161
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.20 E-value=1.2e-06 Score=86.49 Aligned_cols=128 Identities=19% Similarity=0.171 Sum_probs=80.3
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEcc--CCccee--e
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGM--GSGSIC--T 325 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~--g~g~~~--~ 325 (505)
.+.++.+.++|+|.+..+..... .+.++.+++...++++++ .+.+++.+..+.++|+|+|.+-. +.|... .
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~----~~~~~~~~~~~~~i~l~~-~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~ 164 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTP----ADEEHHIDKWKFKVPFVC-GARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAV 164 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCC----SCSSCCCCGGGCSSCEEE-EESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHH
T ss_pred HHHHHHHHHCCCCEEeeeCCCCh----HHHHHHHHHhCCCceEEe-ecCCHHHHHHHHHcCCCEEEEcccccCcchHHHH
Confidence 57788888999999933221111 112222333223677765 47789999999999999986631 111100 0
Q ss_pred cc---------ccccc-----------CcChHHHHHHHHHHHhhcCCcEE--ecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 326 TQ---------EVCAV-----------GRGQATAVYKVSSIAAQSGVPVI--ADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 326 ~~---------~~~g~-----------g~p~~~~l~~v~~~~~~~~ipvI--a~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
+. ...++ ..+.+..+..++ +..++|++ ++|||.++.|+.+++.+||++|++|+.+
T Consensus 165 ~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~---~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai 241 (297)
T 2zbt_A 165 RHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVH---DHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGI 241 (297)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH---HHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGG
T ss_pred hhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHH---HhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHH
Confidence 00 00000 112233444443 33578988 9999999999999999999999999988
Q ss_pred cC
Q 010640 384 AG 385 (505)
Q Consensus 384 ~~ 385 (505)
..
T Consensus 242 ~~ 243 (297)
T 2zbt_A 242 FK 243 (297)
T ss_dssp GG
T ss_pred hC
Confidence 53
No 162
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.18 E-value=2.5e-05 Score=75.59 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=88.2
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCc---------------------hhHHHHHHHHHHhCCCceEEEcccC-------
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNS---------------------SFQIEMIKYAKKTYPELDVIGGNVV------- 298 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~---------------------~~~~~~i~~l~~~~~~~~Vi~g~V~------- 298 (505)
+...+.++.|.++|+|++++..++..+ ....+.++.+|+..+++|++.=...
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g 111 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANG 111 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhh
Confidence 457788899999999999998543211 2447888888887447887662221
Q ss_pred CHHHHHHHHHcCCCEEEEc-cC--------------------------------------Ccceeeccc--ccccCcChH
Q 010640 299 TMYQAQNLIEAGVDGLRVG-MG--------------------------------------SGSICTTQE--VCAVGRGQA 337 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~-~g--------------------------------------~g~~~~~~~--~~g~g~p~~ 337 (505)
...-++.+.++|+|++.+. .. .|-+..-.. .+|......
T Consensus 112 ~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~ 191 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAG 191 (267)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC-------
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCc
Confidence 2445788999999998774 20 000000000 111110001
Q ss_pred H-HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 338 T-AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 338 ~-~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
. ....+.+..+..++||+..|||.+++++.+++..|||+|.+||.|.
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 192 EPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp -CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 1 1122233333357999999999999999999999999999999985
No 163
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.18 E-value=2.9e-06 Score=71.36 Aligned_cols=98 Identities=10% Similarity=0.148 Sum_probs=70.7
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCC-CCcceEEEe
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGP-DGKWMVGAA 242 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~-~~~l~v~a~ 242 (505)
++.++|++ +++++++++++.++++.|.+++...+||+|+ |+++|+||..|+++....... +..+. .... + .
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~--~v~~~~~~~~-~--~ 74 (122)
T 3kpb_A 2 LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKK--TIEEIMTRNV-I--T 74 (122)
T ss_dssp BHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTCC--BGGGTSBSSC-C--C
T ss_pred chHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhccc--CHHHHhcCCC-e--E
Confidence 57899998 9999999999999999999999999999998 999999999999987543211 01111 0111 1 1
Q ss_pred ecCCccHHHHHHHHHHcCccEEEEeCC
Q 010640 243 IGTRESDKERLEHLVKAGVNVVVLDSS 269 (505)
Q Consensus 243 i~~~~~~~e~~~~lieaGad~I~i~~~ 269 (505)
+.......+.++.+.+.+...+.+...
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 101 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDD 101 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECC
Confidence 122334666777777778777665433
No 164
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.18 E-value=1.3e-05 Score=80.53 Aligned_cols=132 Identities=19% Similarity=0.176 Sum_probs=87.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------------chhHHHHHHHHHHhCC-CceEEEccc-----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------------SSFQIEMIKYAKKTYP-ELDVIGGNV----- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------------~~~~~~~i~~l~~~~~-~~~Vi~g~V----- 297 (505)
++.+.++.+.++|.|.|.|+.++|+ .....+.++.+++.++ +.||.++--
T Consensus 144 ~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~ 223 (343)
T 3kru_A 144 AFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYM 223 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSS
T ss_pred HHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhh
Confidence 3566677788899999999954321 1235788888898874 567777311
Q ss_pred ---CC----HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHH
Q 010640 298 ---VT----MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKAL 370 (505)
Q Consensus 298 ---~t----~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal 370 (505)
.+ .+.++.|.++ +|+|.++.|...........++ ....+..++ +..++|||+.|||.++.++.+++
T Consensus 224 ~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~---~~~~~~~ir---~~~~iPVi~~Ggi~t~e~Ae~~l 296 (343)
T 3kru_A 224 EGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGY---QVKYAETIK---KRCNIKTSAVGLITTQELAEEIL 296 (343)
T ss_dssp TTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTT---THHHHHHHH---HHHTCEEEEESSCCCHHHHHHHH
T ss_pred ccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCce---eehHHHHHH---HhcCcccceeeeeeHHHHHHHHH
Confidence 12 3346777778 9999996432111000001111 223333333 33579999999999999999999
Q ss_pred HhC-CCEEEecccccCC
Q 010640 371 VLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 371 ~lG-A~~V~~G~~f~~~ 386 (505)
..| ||+|++|+.|+.-
T Consensus 297 ~~G~aD~V~iGR~~lan 313 (343)
T 3kru_A 297 SNERADLVALGRELLRN 313 (343)
T ss_dssp HTTSCSEEEESHHHHHC
T ss_pred hchhhHHHHHHHHHhcC
Confidence 999 9999999998753
No 165
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.18 E-value=8.8e-06 Score=76.12 Aligned_cols=110 Identities=23% Similarity=0.340 Sum_probs=77.8
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEV 329 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~ 329 (505)
.+.++.+.+.|+|.+.+ .. . ..+.++..++. +.+++++ +.|.+++..+.+.|+|+|.+- + +. .
T Consensus 70 ~~~i~~a~~~Gad~V~~--~~--~--~~~~~~~~~~~--g~~~~~g-~~t~~e~~~a~~~G~d~v~v~--~-----t~-~ 132 (212)
T 2v82_A 70 PEQVDALARMGCQLIVT--PN--I--HSEVIRRAVGY--GMTVCPG-CATATEAFTALEAGAQALKIF--P-----SS-A 132 (212)
T ss_dssp HHHHHHHHHTTCCEEEC--SS--C--CHHHHHHHHHT--TCEEECE-ECSHHHHHHHHHTTCSEEEET--T-----HH-H
T ss_pred HHHHHHHHHcCCCEEEe--CC--C--CHHHHHHHHHc--CCCEEee-cCCHHHHHHHHHCCCCEEEEe--c-----CC-C
Confidence 35788899999999963 21 1 12344444444 6777776 889999999999999999651 1 10 0
Q ss_pred cccCcChHHHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 330 CAVGRGQATAVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 330 ~g~g~p~~~~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.| +..+.++ ++.. ++||+++|||. ..++.+++.+||++|.+|+.|..
T Consensus 133 --~g---~~~~~~l---~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 133 --FG---PQYIKAL---KAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp --HC---HHHHHHH---HTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCC
T ss_pred --CC---HHHHHHH---HHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 11 2333333 3333 49999999997 99999999999999999998854
No 166
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.18 E-value=3e-06 Score=72.24 Aligned_cols=100 Identities=10% Similarity=-0.089 Sum_probs=70.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCC-CCccCC-CCcceEE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLG-KGTVGP-DGKWMVG 240 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~-~~~~d~-~~~l~v~ 240 (505)
+.+++++|++ +++++.+++++.++++.|.+++...+||+|+|+++|+||.+|+++........ .+..+. .... .
T Consensus 4 s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~-~- 79 (128)
T 3gby_A 4 SVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETV-R- 79 (128)
T ss_dssp TCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCC-C-
T ss_pred ceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCC-c-
Confidence 4578999999 99999999999999999999999999999999999999999999875432110 000010 0000 0
Q ss_pred EeecCCccHHHHHHHHHHcCccEEEEe
Q 010640 241 AAIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 241 a~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
.+.......+.++.+.+.+...+.+.
T Consensus 80 -~v~~~~~l~~~~~~~~~~~~~~lpVv 105 (128)
T 3gby_A 80 -SYRPGEQLFDNLISVAAAKCSVVPLA 105 (128)
T ss_dssp -CBCTTSBGGGSHHHHHHCSSSEEEEE
T ss_pred -EECCCCCHHHHHHHHHhCCCcEEEEE
Confidence 12222334556667777777755443
No 167
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.18 E-value=2.5e-05 Score=83.75 Aligned_cols=182 Identities=14% Similarity=0.090 Sum_probs=110.8
Q ss_pred CHHHHHHHHHHCCCCeeEEeeC-CeeeeEEee---chhhhhhcCCCCCCCccCCCCcceEEEeecCCcc-------HHHH
Q 010640 184 DLGQIDEVLEKNDVDFVVLEKD-GERLDVVTR---EDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRES-------DKER 252 (505)
Q Consensus 184 ~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~---~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~-------~~e~ 252 (505)
+..+.++.+.+.+.+.+-++|= +..-|-..+ .++++.... .....+.++..+...++ ..+.
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~--------~~~ipi~vgGGIr~~~d~~~~~~~~~~~ 352 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAK--------TVFVPLTVGGGIKDIVDVDGTKIPALEV 352 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTT--------TCCSCEEEESSCSCEECTTCCEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHh--------hCCCcEEEeCccccchhcccccchHHHH
Confidence 4556777888889999999873 211111111 122333211 11234556666643322 5688
Q ss_pred HHHHHHcCccEEEEeCCC----------CCchhHHHHHHHHHHhCCC--ceEEE--cc----------------------
Q 010640 253 LEHLVKAGVNVVVLDSSQ----------GNSSFQIEMIKYAKKTYPE--LDVIG--GN---------------------- 296 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~----------g~~~~~~~~i~~l~~~~~~--~~Vi~--g~---------------------- 296 (505)
++.++++|++.+.+.+.. +......+.++.+.+.|.. +.+.+ +.
T Consensus 353 a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (555)
T 1jvn_A 353 ASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPN 432 (555)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTT
T ss_pred HHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCC
Confidence 899999999999996532 0000012456666665531 21111 10
Q ss_pred -------------------cCCHHHHHHHHHcCCCEEEEccCCcceeeccccccc-CcChHHHHHHHHHHHhhcCCcEEe
Q 010640 297 -------------------VVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAV-GRGQATAVYKVSSIAAQSGVPVIA 356 (505)
Q Consensus 297 -------------------V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~-g~p~~~~l~~v~~~~~~~~ipvIa 356 (505)
+...+.++.+.++|++.|.+- .....|. ..+..+.+.++.+ ..++|||+
T Consensus 433 g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t--------~~~~dG~~~G~d~~li~~l~~---~~~iPVIa 501 (555)
T 1jvn_A 433 GEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLN--------CIDKDGSNSGYDLELIEHVKD---AVKIPVIA 501 (555)
T ss_dssp CCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEEC--------CGGGTTTCSCCCHHHHHHHHH---HCSSCEEE
T ss_pred CCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEe--------CCCCCCCCCCCCHHHHHHHHH---hCCccEEE
Confidence 123688999999999999662 1111111 1145555655544 45799999
Q ss_pred cCCCCCHHHHHHHHH-hCCCEEEeccccc
Q 010640 357 DGGISNSGHIVKALV-LGASTVMMGSFLA 384 (505)
Q Consensus 357 ~GGI~~~~di~kal~-lGA~~V~~G~~f~ 384 (505)
+|||.+..|+.+++. .||++|++|++|.
T Consensus 502 sGGi~s~~d~~~~~~~~G~~gvivg~a~~ 530 (555)
T 1jvn_A 502 SSGAGVPEHFEEAFLKTRADACLGAGMFH 530 (555)
T ss_dssp CSCCCSHHHHHHHHHHSCCSEEEESHHHH
T ss_pred ECCCCCHHHHHHHHHhcCChHHHHHHHHH
Confidence 999999999999998 8999999999985
No 168
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.17 E-value=1.2e-05 Score=76.69 Aligned_cols=174 Identities=16% Similarity=0.113 Sum_probs=100.6
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGV 261 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGa 261 (505)
.+..+.++.+.+.+.+.+-|.|- ..--+--..-++++... .....++++..+. ..+.++.+++.|+
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~---------~~~ipvi~~Ggi~----~~~~~~~~~~~Ga 96 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS---------EFAEHIQIGGGIR----SLDYAEKLRKLGY 96 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG---------GGGGGEEEESSCC----SHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH---------hcCCcEEEECCCC----CHHHHHHHHHCCC
Confidence 45677888889999988877752 10000000111222211 0111233333332 3466777888999
Q ss_pred cEEEEeCCC-CCchhHHHHHHHHHHhCCC-ceEEEccc----------------CCHHHHHHHHHcCCCEEEEccCCcce
Q 010640 262 NVVVLDSSQ-GNSSFQIEMIKYAKKTYPE-LDVIGGNV----------------VTMYQAQNLIEAGVDGLRVGMGSGSI 323 (505)
Q Consensus 262 d~I~i~~~~-g~~~~~~~~i~~l~~~~~~-~~Vi~g~V----------------~t~e~a~~l~~aGad~I~v~~g~g~~ 323 (505)
|.+.+.... ..+ +.+..+ +.++. +.+.+ .+ ...+.++.+.++|++.|.+..
T Consensus 97 d~V~lg~~~l~~p----~~~~~~-~~~g~~i~~~~-d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~----- 165 (241)
T 1qo2_A 97 RRQIVSSKVLEDP----SFLKSL-REIDVEPVFSL-DTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTE----- 165 (241)
T ss_dssp CEEEECHHHHHCT----THHHHH-HTTTCEEEEEE-EEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEE-----
T ss_pred CEEEECchHhhCh----HHHHHH-HHcCCcEEEEE-EecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEe-----
Confidence 999873321 111 234445 44421 12212 22 224557889999999886631
Q ss_pred eecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHh-----C-CCEEEecccccC
Q 010640 324 CTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVL-----G-ASTVMMGSFLAG 385 (505)
Q Consensus 324 ~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~l-----G-A~~V~~G~~f~~ 385 (505)
.++.-...| +.++.+.++++. .++|||+.|||.++.|+.+++.+ | |++|++|+.|..
T Consensus 166 -~~~~g~~~g-~~~~~i~~l~~~---~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~ 228 (241)
T 1qo2_A 166 -IEKDGTLQE-HDFSLTKKIAIE---AEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLE 228 (241)
T ss_dssp -TTHHHHTCC-CCHHHHHHHHHH---HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHT
T ss_pred -ecccccCCc-CCHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHc
Confidence 111111112 345555555543 47999999999999999999999 9 999999999864
No 169
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.17 E-value=3.2e-06 Score=63.92 Aligned_cols=48 Identities=21% Similarity=0.281 Sum_probs=44.5
Q ss_pred CceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 175 SNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 175 ~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
+++++.+++++.+++++|.+++++.+||+|+|+++|+||.+|+++...
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHH
Confidence 357899999999999999999999999999999999999999998753
No 170
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.16 E-value=4.2e-06 Score=71.22 Aligned_cols=101 Identities=9% Similarity=0.019 Sum_probs=68.8
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEE
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGA 241 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a 241 (505)
.+++++|++..+++++++++++.++++.|.+++...+||+|+ |+++|+||..|+++.........+..+.-... +
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~~-~-- 79 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTA-V-- 79 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBCC-C--
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCCC-e--
Confidence 468899997335999999999999999999999999999987 69999999999998754221100011100011 1
Q ss_pred eecCCccHHHHHHHHHHcCccEEEEe
Q 010640 242 AIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 242 ~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
.+.......+.++.+.+.+...+.+.
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVv 105 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVI 105 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEE
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEE
Confidence 12222335566666667777666553
No 171
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.16 E-value=1.7e-05 Score=80.45 Aligned_cols=127 Identities=12% Similarity=0.129 Sum_probs=87.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------------chhHHHHHHHHHHhCCCceEEEc----c-cC
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------------SSFQIEMIKYAKKTYPELDVIGG----N-VV 298 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------------~~~~~~~i~~l~~~~~~~~Vi~g----~-V~ 298 (505)
++.+.++.+.++|.|.|.|+.++|. .+...+.++.+|+.++.-||.++ . ..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 3556667778899999999887642 01356778889998742277762 1 11
Q ss_pred -------CHH----HHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHH
Q 010640 299 -------TMY----QAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIV 367 (505)
Q Consensus 299 -------t~e----~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~ 367 (505)
+.+ .++.+.++|+|+|.++.+. .... ...+ ...+. ++.+..++|||+.||| ++.++.
T Consensus 242 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~--~~~~-----~~~~-~~~~~---~v~~~~~iPvi~~Ggi-t~~~a~ 309 (364)
T 1vyr_A 242 NVDNGPNEEADALYLIEELAKRGIAYLHMSETD--LAGG-----KPYS-EAFRQ---KVRERFHGVIIGAGAY-TAEKAE 309 (364)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB--TTBC-----CCCC-HHHHH---HHHHHCCSEEEEESSC-CHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCEEEEecCc--ccCC-----Cccc-HHHHH---HHHHHCCCCEEEECCc-CHHHHH
Confidence 233 3788889999999986421 1000 0112 22233 3334467999999999 999999
Q ss_pred HHHHhC-CCEEEecccccCC
Q 010640 368 KALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 368 kal~lG-A~~V~~G~~f~~~ 386 (505)
+++..| ||+|++|+.|+..
T Consensus 310 ~~l~~g~aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 310 DLIGKGLIDAVAFGRDYIAN 329 (364)
T ss_dssp HHHHTTSCSEEEESHHHHHC
T ss_pred HHHHCCCccEEEECHHHHhC
Confidence 999998 9999999999764
No 172
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.15 E-value=3.3e-05 Score=74.79 Aligned_cols=136 Identities=17% Similarity=0.235 Sum_probs=87.0
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc---------------------hhHHHHHHHHHHhCCCceEEEcccCC-------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS---------------------SFQIEMIKYAKKTYPELDVIGGNVVT------- 299 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~---------------------~~~~~~i~~l~~~~~~~~Vi~g~V~t------- 299 (505)
...+.++.+.+.|+|++++..+...+ ....+.++.+++.+|++|+++=...+
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~ 111 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGL 111 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhH
Confidence 46677889999999999998755322 23457788898887678887611111
Q ss_pred HHHHHHHHHcCCCEEEEc-cCC-------------c-c-e---ee-cc---------------------cccccCcChH-
Q 010640 300 MYQAQNLIEAGVDGLRVG-MGS-------------G-S-I---CT-TQ---------------------EVCAVGRGQA- 337 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~-~g~-------------g-~-~---~~-~~---------------------~~~g~g~p~~- 337 (505)
...++.+.++|+|++.+. ... | . + .. +. ..+|...+..
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~ 191 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPY 191 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------C
T ss_pred HHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCc
Confidence 356678889999988764 200 0 0 0 00 00 0111111111
Q ss_pred HHH-HHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 338 TAV-YKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 338 ~~l-~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
..+ ..+.+..+..++||+..+||.++.++.+ +..|||+|.+||.|.
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~ 238 (262)
T 2ekc_A 192 ERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGSALV 238 (262)
T ss_dssp HHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHH
T ss_pred ccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHH
Confidence 112 2333333345799999999999999999 889999999999985
No 173
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.14 E-value=6.5e-06 Score=74.20 Aligned_cols=102 Identities=14% Similarity=0.034 Sum_probs=71.5
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVG 240 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~ 240 (505)
..+++++|++..+++++++++++.+++++|.++++..+||+|+ ++++|+||..|+++....... .+..+.-.. .+.
T Consensus 41 ~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~-~~v~~im~~-~~~ 118 (172)
T 3lhh_A 41 ERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGER-LELVDLVKN-CNF 118 (172)
T ss_dssp --CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTCC-CCGGGGCBC-CEE
T ss_pred CCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcCc-ccHHHHhcC-CeE
Confidence 4579999995448999999999999999999999999999987 899999999999987653211 001111111 121
Q ss_pred EeecCCccHHHHHHHHHHcCccEEEEeC
Q 010640 241 AAIGTRESDKERLEHLVKAGVNVVVLDS 268 (505)
Q Consensus 241 a~i~~~~~~~e~~~~lieaGad~I~i~~ 268 (505)
+. ......+.++.+.+.+...+.+..
T Consensus 119 v~--~~~~l~~a~~~m~~~~~~~~pVvd 144 (172)
T 3lhh_A 119 VP--NSLSGMELLEHFRTTGSQMVFVVD 144 (172)
T ss_dssp EE--TTCCHHHHHHHHHHHTCSEEEEEC
T ss_pred eC--CCCCHHHHHHHHHHcCCeEEEEEe
Confidence 22 233466677777777777665533
No 174
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.13 E-value=3.5e-05 Score=73.70 Aligned_cols=177 Identities=9% Similarity=0.093 Sum_probs=113.0
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
.++....+..+...+. ...+-|..| ..+.| +..||....... .+++-...--. +..+ +..+.+
T Consensus 58 ~~~~~~~~iA~~y~~~-A~~IsVlTd~~~F~g--s~~dL~~ir~~v-----------~lPvLrKDfi~-~~~q-i~ea~~ 121 (251)
T 1i4n_A 58 NADASLEDFIRMYDEL-ADAISILTEKHYFKG--DPAFVRAARNLT-----------CRPILAKDFYI-DTVQ-VKLASS 121 (251)
T ss_dssp CTTCCHHHHHHHHHHH-CSEEEEECCCSSSCC--CTHHHHHHHTTC-----------CSCEEEECCCC-STHH-HHHHHH
T ss_pred CCCCCHHHHHHHHHHh-CCceEEEecccccCC--CHHHHHHHHHhC-----------CCCEEEeeCCC-CHHH-HHHHHH
Confidence 3444666666666666 777778766 55666 456665544321 12222221111 2233 445888
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHc-CCCEEEEccCCcceeecccccccCcChH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEA-GVDGLRVGMGSGSICTTQEVCAVGRGQA 337 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~a-Gad~I~v~~g~g~~~~~~~~~g~g~p~~ 337 (505)
.|+|++.+..+.=......+.++..++. +..+++ ++.+.+++..+.++ |+|.|-+-+ +.+.++.. .+
T Consensus 122 ~GAD~ilLi~a~l~~~~l~~l~~~a~~l--Gl~~lv-Ev~~~eE~~~A~~l~g~~iIGinn--------r~l~t~~~-d~ 189 (251)
T 1i4n_A 122 VGADAILIIARILTAEQIKEIYEAAEEL--GMDSLV-EVHSREDLEKVFSVIRPKIIGINT--------RDLDTFEI-KK 189 (251)
T ss_dssp TTCSEEEEEGGGSCHHHHHHHHHHHHTT--TCEEEE-EECSHHHHHHHHTTCCCSEEEEEC--------BCTTTCCB-CT
T ss_pred cCCCEEEEecccCCHHHHHHHHHHHHHc--CCeEEE-EeCCHHHHHHHHhcCCCCEEEEeC--------cccccCCC-CH
Confidence 9999998876642223455555555554 788877 89999999999999 999884422 33333322 22
Q ss_pred HHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 338 TAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 338 ~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
.....+..... .++++|+.|||.++.|+.++..+ |++|.+|+.|..+
T Consensus 190 ~~~~~l~~~ip-~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 190 NVLWELLPLVP-DDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp THHHHHGGGSC-TTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHC
T ss_pred HHHHHHHHhCC-CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCC
Confidence 22222222221 25799999999999999999999 9999999999754
No 175
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.13 E-value=2e-05 Score=75.48 Aligned_cols=133 Identities=20% Similarity=0.234 Sum_probs=89.7
Q ss_pred ccHHHHHHHHHHcCccEEEE-eC--CCCCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEcc----
Q 010640 247 ESDKERLEHLVKAGVNVVVL-DS--SQGNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVGM---- 318 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i-~~--~~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~~---- 318 (505)
.+..+.++...+.|++.+++ |. +........+.++.+.+.+ .+|+.+ |++.+.++++.+.++|+|-+.++.
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~ 109 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIK 109 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEEEcccccc
Confidence 35778888899999998866 33 2222334567788887776 788866 688999999999999999998863
Q ss_pred ------------CCcce------------------------------------------eeccc-ccccC-cChHHHHHH
Q 010640 319 ------------GSGSI------------------------------------------CTTQE-VCAVG-RGQATAVYK 342 (505)
Q Consensus 319 ------------g~g~~------------------------------------------~~~~~-~~g~g-~p~~~~l~~ 342 (505)
|.-.+ ..+.. ..|.. .|.+..+..
T Consensus 110 ~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~ 189 (243)
T 4gj1_A 110 DATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKL 189 (243)
T ss_dssp CHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHH
T ss_pred CCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHH
Confidence 10000 00000 01111 144444544
Q ss_pred HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 343 VSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 343 v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
+.+.. .++|||++||+.+..|+.+. ..++++|.+|++|
T Consensus 190 l~~~~--~~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al 227 (243)
T 4gj1_A 190 IHEIF--PNICIQASGGVASLKDLENL-KGICSGVIVGKAL 227 (243)
T ss_dssp HHHHC--TTSEEEEESCCCSHHHHHHT-TTTCSEEEECHHH
T ss_pred HHHhc--CCCCEEEEcCCCCHHHHHHH-HccCchhehHHHH
Confidence 43321 25999999999999999775 5679999999988
No 176
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.13 E-value=9.3e-06 Score=69.39 Aligned_cols=102 Identities=13% Similarity=0.200 Sum_probs=71.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCC-CCCccCCCCcceEEE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNL-GKGTVGPDGKWMVGA 241 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~-~~~~~d~~~~l~v~a 241 (505)
+.++.++|++ +++++++++++.++++.|.+++.+.+||+|+|+++|+||..|+++....... ..+..+.-..-..
T Consensus 3 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~-- 78 (133)
T 2ef7_A 3 EEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKGKSLETKAEEFMTASLI-- 78 (133)
T ss_dssp CCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCC--
T ss_pred cccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCE--
Confidence 3578999998 8999999999999999999999999999998999999999999876543211 0001111000000
Q ss_pred eecCCccHHHHHHHHHHcCccEEEEeC
Q 010640 242 AIGTRESDKERLEHLVKAGVNVVVLDS 268 (505)
Q Consensus 242 ~i~~~~~~~e~~~~lieaGad~I~i~~ 268 (505)
.+.......+.++.+.+.+...+.+..
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 112233456677777778887665533
No 177
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.13 E-value=8.6e-06 Score=70.28 Aligned_cols=102 Identities=10% Similarity=-0.021 Sum_probs=70.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCC-CCCccCCCCcceE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNL-GKGTVGPDGKWMV 239 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~-~~~~~d~~~~l~v 239 (505)
+.++.++|++..+++++.+++++.+++++|.+++...+||+|+ |+++|+||..|+++....... ..+..+.-.. .+
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~-~~ 80 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRP-AT 80 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBC-CC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCC-Ce
Confidence 3468899995448899999999999999999999999999987 699999999999987541110 0001111111 11
Q ss_pred EEeecCCccHHHHHHHHHHcCccEEEEe
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
. +.......+.++.+.+.+...+.+-
T Consensus 81 ~--v~~~~~l~~~~~~m~~~~~~~~~Vv 106 (136)
T 3lfr_A 81 F--VPESKRLNVLLREFRANHNHMAIVI 106 (136)
T ss_dssp E--EETTCBHHHHHHHHHHHTCCEEEEE
T ss_pred E--ECCCCcHHHHHHHHHhcCCeEEEEE
Confidence 1 1123346666777777777766553
No 178
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.12 E-value=2.5e-06 Score=72.98 Aligned_cols=60 Identities=10% Similarity=0.128 Sum_probs=53.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~ 222 (505)
+.++.++|++..+++++++++++.++++.|.+++...+||+|+ |+++|+||..|+++...
T Consensus 5 ~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 66 (130)
T 3i8n_A 5 DVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQ 66 (130)
T ss_dssp --CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHH
T ss_pred cCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHh
Confidence 4578999997557889999999999999999999999999986 79999999999998764
No 179
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.10 E-value=1.7e-06 Score=65.42 Aligned_cols=58 Identities=22% Similarity=0.320 Sum_probs=48.3
Q ss_pred eEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccc--c----ccccccccccccCCCceE
Q 010640 115 VFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENL--S----DNKVKIFDYMRDCSSNVS 178 (505)
Q Consensus 115 ~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~--~----~~~~~v~~im~~~~~~~~ 178 (505)
+++++++++.++++.|.+ ++ +||+| +++++|+||.+|+... . ..+.++.++|++ ++++
T Consensus 3 ~~v~~~~~~~~a~~~m~~~~~~~~pV~d----~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~ 69 (70)
T 3fio_A 3 IVVQPKDTVDRVAKILSRNKAGSAVVME----GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK--NPVK 69 (70)
T ss_dssp EEECTTCBHHHHHHHHHHTTCSEEEEEE----TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE--CTTC
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEEEE----CCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCC--CCeE
Confidence 789999999999999988 76 99998 5899999999999632 1 235689999998 6554
No 180
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.10 E-value=5.9e-06 Score=72.42 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=54.4
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
.++.++|++..+++++.+++++.++++.|.+++...+||+|+ |+++|+||..|+++...
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 87 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFD 87 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHh
Confidence 479999986557899999999999999999999999999998 99999999999998764
No 181
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.09 E-value=2.1e-05 Score=73.33 Aligned_cols=123 Identities=19% Similarity=0.249 Sum_probs=85.6
Q ss_pred cceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEE
Q 010640 236 KWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 236 ~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~ 315 (505)
.+.+++.. .. ..++++.++++|+++++. .+. ..+.++..++. +.+++.| +.|++++..+.+.|+|++.
T Consensus 62 ~~~~gag~-vl--~~d~~~~A~~~GAd~v~~--~~~----d~~v~~~~~~~--g~~~i~G-~~t~~e~~~A~~~Gad~v~ 129 (207)
T 2yw3_A 62 GLLLGAGT-VR--SPKEAEAALEAGAAFLVS--PGL----LEEVAALAQAR--GVPYLPG-VLTPTEVERALALGLSALK 129 (207)
T ss_dssp SCEEEEES-CC--SHHHHHHHHHHTCSEEEE--SSC----CHHHHHHHHHH--TCCEEEE-ECSHHHHHHHHHTTCCEEE
T ss_pred CCEEEeCe-Ee--eHHHHHHHHHcCCCEEEc--CCC----CHHHHHHHHHh--CCCEEec-CCCHHHHHHHHHCCCCEEE
Confidence 45565554 22 348889999999999964 221 13444555554 6788876 8899999999999999997
Q ss_pred EccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 316 VGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
+- + . ... ..++.+..++.... ++|+++.|||. ..++...+++||++|.+|+.+..
T Consensus 130 ~f--p-----a---~~~--gG~~~lk~l~~~~~--~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 130 FF--P-----A---EPF--QGVRVLRAYAEVFP--EVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp ET--T-----T---TTT--THHHHHHHHHHHCT--TCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred Ee--c-----C---ccc--cCHHHHHHHHhhCC--CCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 61 1 0 011 01233443333221 69999999996 79999999999999999998754
No 182
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.08 E-value=3.8e-05 Score=72.09 Aligned_cols=182 Identities=16% Similarity=0.146 Sum_probs=107.1
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEee-chhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcC
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTR-EDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAG 260 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~-~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaG 260 (505)
.++.+.++.+.+.+.+.+=+..- |.....++. -++.+..... .+..+.+...+..++ +.++.+.+.|
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~--------~~~~~~v~l~v~d~~---~~i~~~~~~g 84 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH--------SKLVFDCHLMVVDPE---RYVEAFAQAG 84 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT--------CCSEEEEEEESSSGG---GGHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh--------CCCCEEEEEeecCHH---HHHHHHHHcC
Confidence 46788899999988887654432 443333332 2333333210 112344554544332 2457788899
Q ss_pred ccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEE-ccCCcceeecccccccCcChHH
Q 010640 261 VNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRV-GMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 261 ad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v-~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
+|.+.+|...+. .....++.+++. +..+++. +..+..+.......++|++.+ +.++|.. +..+ +| ..+.
T Consensus 85 ad~v~vh~~~~~--~~~~~~~~~~~~--g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~--g~~~-~~--~~~~ 155 (220)
T 2fli_A 85 ADIMTIHTESTR--HIHGALQKIKAA--GMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFG--GQAF-IP--ECLE 155 (220)
T ss_dssp CSEEEEEGGGCS--CHHHHHHHHHHT--TSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCS--SCCC-CG--GGHH
T ss_pred CCEEEEccCccc--cHHHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCc--cccc-CH--HHHH
Confidence 999999876552 344566666664 5555442 223444333334567998865 4333211 1111 11 2233
Q ss_pred HHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 339 AVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 339 ~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
-+..+++.+... ++|++++|||. +.++.+++.+||++|.+|+.+..
T Consensus 156 ~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~ 203 (220)
T 2fli_A 156 KVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFK 203 (220)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 444455544322 68999999999 88999999999999999999864
No 183
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.08 E-value=6.1e-05 Score=78.04 Aligned_cols=176 Identities=11% Similarity=0.093 Sum_probs=113.3
Q ss_pred cCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHH
Q 010640 180 PANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVK 258 (505)
Q Consensus 180 ~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lie 258 (505)
.++....+..+...+. ...+=|..| ..+.| +..||....... .+++-... -.-+..+ +..+..
T Consensus 65 ~~~~~~~~iA~~y~~~-A~~IsvLTd~~~F~g--s~~dL~~vr~~v-----------~lPvLrKD-FI~d~~Q-i~ea~~ 128 (452)
T 1pii_A 65 RDDFDPARIAAIYKHY-ASAISVLTDEKYFQG--SFNFLPIVSQIA-----------PQPILCKD-FIIDPYQ-IYLARY 128 (452)
T ss_dssp CSSCCHHHHHHHHTTT-CSEEEEECCSTTTCC--CTTHHHHHHHHC-----------CSCEEEES-CCCSHHH-HHHHHH
T ss_pred CCCCCHHHHHHHHHhh-CcEEEEEecccccCC--CHHHHHHHHHhc-----------CCCeEEEe-ccCCHHH-HHHHHH
Confidence 3445566666666666 777777655 55555 445554433211 01121111 1112333 445888
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHH
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQAT 338 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~ 338 (505)
.|+|++.+..+.=......++++..++. +..+++ +|.+.+++..+.++|++.|-+- .+.+..+. +.+.
T Consensus 129 ~GAD~ILLi~a~l~~~~l~~l~~~a~~l--gm~~Lv-Evh~~eE~~~A~~lga~iIGin--------nr~L~t~~-~dl~ 196 (452)
T 1pii_A 129 YQADACLLMLSVLDDDQYRQLAAVAHSL--EMGVLT-EVSNEEEQERAIALGAKVVGIN--------NRDLRDLS-IDLN 196 (452)
T ss_dssp TTCSEEEEETTTCCHHHHHHHHHHHHHT--TCEEEE-EECSHHHHHHHHHTTCSEEEEE--------SEETTTTE-ECTH
T ss_pred cCCCEEEEEcccCCHHHHHHHHHHHHHc--CCeEEE-EeCCHHHHHHHHHCCCCEEEEe--------CCCCCCCC-CCHH
Confidence 9999998877643334456666666665 788888 8999999999999999988432 23333322 2344
Q ss_pred HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 339 AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 339 ~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
...++..... .++++|+.|||.++.|+.++..+ |++|.+|+.|..
T Consensus 197 ~~~~L~~~ip-~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr 241 (452)
T 1pii_A 197 RTRELAPKLG-HNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA 241 (452)
T ss_dssp HHHHHHHHHC-TTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT
T ss_pred HHHHHHHhCC-CCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 4444444443 26899999999999999999999 999999999864
No 184
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.08 E-value=2.2e-05 Score=67.80 Aligned_cols=99 Identities=17% Similarity=0.223 Sum_probs=69.6
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-C--eeeeEEeechhhhhhcCCCC-CCCccCCCCcceE
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-G--ERLDVVTREDVERLKGYPNL-GKGTVGPDGKWMV 239 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g--~l~GiIt~~dil~~~~~~~~-~~~~~d~~~~l~v 239 (505)
.++.++|++ +++++++++++.++++.|.+++.+.+||+|+ + +++|+||..|+++....... ..+..+.-.+-.+
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 82 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPIT 82 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCCCE
T ss_pred eEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCCCe
Confidence 468899998 9999999999999999999999999999998 7 99999999999987532211 0001111000111
Q ss_pred EEeecCCccHHHHHHHHHHcCccEEEEe
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
.+... ...+.++.+.+.+...+.+.
T Consensus 83 --~v~~~-~l~~a~~~m~~~~~~~l~Vv 107 (141)
T 2rih_A 83 --VLDTD-PVHVAAEKMRRHNIRHVVVV 107 (141)
T ss_dssp --EETTS-BHHHHHHHHHHHTCSEEEEE
T ss_pred --EEcCC-CHHHHHHHHHHcCCeEEEEE
Confidence 12223 45666677777777666553
No 185
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.07 E-value=2.9e-05 Score=78.79 Aligned_cols=127 Identities=14% Similarity=0.068 Sum_probs=86.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc------------------------hhHHHHHHHHHHhCCCceEEEc--c---c-
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS------------------------SFQIEMIKYAKKTYPELDVIGG--N---V- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~------------------------~~~~~~i~~l~~~~~~~~Vi~g--~---V- 297 (505)
++.+.++.+.++|.|.|.|+..+|+- +...+.++.+|+.++.-||.++ . .
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 35566677788999999999866411 1346778888887632277662 1 0
Q ss_pred -----CCHH----HHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 298 -----VTMY----QAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 298 -----~t~e----~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
.+.+ .++.+.++|+|+|.++.+. .. . ..+.| ...+. +..+..++|||+.||| ++.++.+
T Consensus 242 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~--~~-~----~~~~~-~~~~~---~i~~~~~iPvi~~Ggi-~~~~a~~ 309 (365)
T 2gou_A 242 GTVDADPILTYTAAAALLNKHRIVYLHIAEVD--WD-D----APDTP-VSFKR---ALREAYQGVLIYAGRY-NAEKAEQ 309 (365)
T ss_dssp SCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB--TT-B----CCCCC-HHHHH---HHHHHCCSEEEEESSC-CHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC--cC-C----CCCcc-HHHHH---HHHHHCCCcEEEeCCC-CHHHHHH
Confidence 1233 3788889999999986421 00 0 00112 22233 3334467999999999 9999999
Q ss_pred HHHhC-CCEEEecccccCC
Q 010640 369 ALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~ 386 (505)
++..| ||+|++|+.|+..
T Consensus 310 ~l~~g~aD~V~igR~~i~~ 328 (365)
T 2gou_A 310 AINDGLADMIGFGRPFIAN 328 (365)
T ss_dssp HHHTTSCSEEECCHHHHHC
T ss_pred HHHCCCcceehhcHHHHhC
Confidence 99999 9999999999863
No 186
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.07 E-value=1.3e-05 Score=75.71 Aligned_cols=121 Identities=18% Similarity=0.295 Sum_probs=86.1
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v 316 (505)
+.+++.. .- ..+.++.++++|+++++. + +. ..+.++..++. +++++.| +.|++++..+.++|+|++.+
T Consensus 86 ~~iGaGT--Vl-t~~~a~~Ai~AGA~fIvs--P-~~---~~~vi~~~~~~--gi~~ipG-v~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 86 MLIGAGT--IL-NGEQALAAKEAGATFVVS--P-GF---NPNTVRACQEI--GIDIVPG-VNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp CEEEEEC--CC-SHHHHHHHHHHTCSEEEC--S-SC---CHHHHHHHHHH--TCEEECE-ECSHHHHHHHHHTTCCEEEE
T ss_pred CEEeECC--cC-CHHHHHHHHHcCCCEEEe--C-CC---CHHHHHHHHHc--CCCEEcC-CCCHHHHHHHHHcCCCEEEE
Confidence 4566553 22 478899999999999964 2 22 23556666666 7899885 78999999999999999976
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
= + .. . . +.+..+..++... -++|+++.||| +...+...+++||.++..|+.+.
T Consensus 154 F--P-----a~-~--~--gG~~~lkal~~p~--p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 154 F--P-----AE-A--S--GGISMVKSLVGPY--GDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp C--S-----TT-T--T--THHHHHHHHHTTC--TTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGG
T ss_pred C--c-----Cc-c--c--cCHHHHHHHHHHh--cCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchhc
Confidence 1 1 10 0 1 1233343333222 25999999999 58999999999999999998775
No 187
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.06 E-value=2.3e-05 Score=67.39 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=67.4
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhh-hhcCCCC-CCCccCCCCcceE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVER-LKGYPNL-GKGTVGPDGKWMV 239 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~-~~~~~~~-~~~~~d~~~~l~v 239 (505)
..++.++|++ +++++++++++.++++.|.+++...+||+|+ |+++|+||..|+++ ....... ..+..+.-..-.+
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 83 (138)
T 2yzi_A 6 KAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRNLI 83 (138)
T ss_dssp TSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBCSCC
T ss_pred hhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhCCCe
Confidence 4578999998 9999999999999999999999999999997 99999999999984 3221100 0001111000111
Q ss_pred EEeecCCccHHHHHHHHHHcCccEE
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVV 264 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I 264 (505)
.+.......+.++.+.+.+...+
T Consensus 84 --~v~~~~~l~~~~~~m~~~~~~~l 106 (138)
T 2yzi_A 84 --TANVNTPLGEVLRKMAEHRIKHI 106 (138)
T ss_dssp --EEETTSBHHHHHHHHHHHTCSEE
T ss_pred --EECCCCcHHHHHHHHHhcCCCEE
Confidence 11122345666777777777766
No 188
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.05 E-value=2.8e-06 Score=72.87 Aligned_cols=59 Identities=22% Similarity=0.244 Sum_probs=52.8
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhc
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKG 222 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~ 222 (505)
.+++++|++..+++++++++++.+++++|.++++..+||+++ |+++|+||..|+++...
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~ 62 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMT 62 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHT
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 357899986457899999999999999999999999999964 89999999999998864
No 189
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.03 E-value=2.3e-05 Score=86.17 Aligned_cols=137 Identities=17% Similarity=0.184 Sum_probs=89.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------------chhHHHHHHHHHHhC-CCceEEEc----c--
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------------SSFQIEMIKYAKKTY-PELDVIGG----N-- 296 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------------~~~~~~~i~~l~~~~-~~~~Vi~g----~-- 296 (505)
++.+.++.+.++|.|.|.++.++|+ .....+.++.+|+.+ ++.|+.++ .
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 3556677788899999999876642 122577788888876 36777652 1
Q ss_pred --cCCH----HHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHH
Q 010640 297 --VVTM----YQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKAL 370 (505)
Q Consensus 297 --V~t~----e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal 370 (505)
-.+. +.++.+.++|+|+|.++.+.-.... .......|....+..+.+..+..++|||+.|||.++.++.+++
T Consensus 222 ~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l 299 (671)
T 1ps9_A 222 EDGGTFAETVELAQAIEAAGATIINTGIGWHEARI--PTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDIL 299 (671)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSS--CSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEcCCCcccccc--ccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHH
Confidence 1133 4567888999999988642110000 0000001111112223344455689999999999999999999
Q ss_pred HhC-CCEEEecccccCC
Q 010640 371 VLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 371 ~lG-A~~V~~G~~f~~~ 386 (505)
..| ||+|++|++|+..
T Consensus 300 ~~g~aD~V~~gR~~l~~ 316 (671)
T 1ps9_A 300 SRGDADMVSMARPFLAD 316 (671)
T ss_dssp HTTSCSEEEESTHHHHC
T ss_pred HcCCCCEEEeCHHHHhC
Confidence 999 9999999998753
No 190
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.01 E-value=3.9e-06 Score=74.08 Aligned_cols=60 Identities=7% Similarity=0.003 Sum_probs=54.6
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++..+++++++++++.+++++|.+++++.+||+|+ |+++|+||..|+++...
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHH
Confidence 4578999995558999999999999999999999999999998 99999999999998753
No 191
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.00 E-value=5.6e-05 Score=76.42 Aligned_cols=121 Identities=18% Similarity=0.164 Sum_probs=85.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEcc-cC----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGGN-VV---- 298 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g~-V~---- 298 (505)
++.+.++.+.++|.|.|.|+.++|+ + +...+.++.+|+.++.-||.++- ..
T Consensus 154 ~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~ 233 (362)
T 4ab4_A 154 AYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAH 233 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccccc
Confidence 3556677788899999999987621 1 23567888888877422776631 00
Q ss_pred ----------CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 299 ----------TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 299 ----------t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
..+.++.|.++|+|+|.++.+. . +.+.. ..+++ ..++|||+.||+ ++.++.+
T Consensus 234 g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~---------~--~~~~~---~~ik~---~~~iPvi~~Ggi-t~e~a~~ 295 (362)
T 4ab4_A 234 DMGDADRAETFTYVARELGKRGIAFICSRERE---------A--DDSIG---PLIKE---AFGGPYIVNERF-DKASANA 295 (362)
T ss_dssp SCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC---------C--TTCCH---HHHHH---HHCSCEEEESSC-CHHHHHH
T ss_pred ccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC---------C--CHHHH---HHHHH---HCCCCEEEeCCC-CHHHHHH
Confidence 1234778889999999986432 0 11222 22333 346899999999 9999999
Q ss_pred HHHhC-CCEEEecccccCC
Q 010640 369 ALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~ 386 (505)
++..| ||+|++|++|+.-
T Consensus 296 ~l~~g~aD~V~iGR~~lan 314 (362)
T 4ab4_A 296 ALASGKADAVAFGVPFIAN 314 (362)
T ss_dssp HHHTTSCSEEEESHHHHHC
T ss_pred HHHcCCccEEEECHHhHhC
Confidence 99998 9999999998754
No 192
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.99 E-value=6.2e-05 Score=72.76 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=74.7
Q ss_pred HHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEE--EcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccC
Q 010640 256 LVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVI--GGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVG 333 (505)
Q Consensus 256 lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi--~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g 333 (505)
+.++|+|.+++.. .......+.++.+++. +++.+ +....+.+..+.+...+.+++.+....|... . ..+..
T Consensus 114 a~~aGadgv~v~d--~~~~~~~~~~~~~~~~--g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG-~--~~~~~ 186 (262)
T 1rd5_A 114 MKEAGVHGLIVPD--LPYVAAHSLWSEAKNN--NLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTG-P--RANVN 186 (262)
T ss_dssp HHHTTCCEEECTT--CBTTTHHHHHHHHHHT--TCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBC-T--TSCBC
T ss_pred HHHcCCCEEEEcC--CChhhHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCC-C--CcCCC
Confidence 7889999887632 2123355666666665 44432 2333556677777777777665531111100 1 11111
Q ss_pred cChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 334 RGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 334 ~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
......+..+++ ..++||+++|||.++.++.+++.+|||+|.+||.|..
T Consensus 187 ~~~~~~i~~v~~---~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 187 PRVESLIQEVKK---VTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp THHHHHHHHHHH---HCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred chHHHHHHHHHh---hcCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 112233444433 3579999999999999999999999999999999854
No 193
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.99 E-value=6.1e-06 Score=73.07 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=54.4
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-C-eeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-G-ERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g-~l~GiIt~~dil~~~~ 222 (505)
..++.++|+++.+++++++++++.+++++|.+++...+||+|+ + +++|+||..|+++...
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~ 98 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMF 98 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSS
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 5679999997557899999999999999999999999999998 5 9999999999998753
No 194
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.99 E-value=2.8e-05 Score=68.86 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=51.6
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
..++.++|++ + +++.+++++.++++.|.+++...+||+|+ |+++|+||..|+++..
T Consensus 16 ~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 16 KLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp TCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred hCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHh
Confidence 4589999986 5 49999999999999999999999999998 9999999999999875
No 195
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.99 E-value=2.6e-05 Score=74.43 Aligned_cols=117 Identities=17% Similarity=0.144 Sum_probs=73.1
Q ss_pred HHHcCccEEEEeCCCCCchhHHHHHHHHHHhCC-CceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCc
Q 010640 256 LVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYP-ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGR 334 (505)
Q Consensus 256 lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~-~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~ 334 (505)
+.+.|+|.+.+....- + . ..+|+.+. +..+.+ ++.|.+++..+.+.|+|+|.++. +..+....+...
T Consensus 108 A~~~gAdGVHLg~~dl-~---~---~~~r~~~~~~~~iG~-S~ht~~Ea~~A~~~GaDyI~vgp----vf~T~tK~~~~~ 175 (243)
T 3o63_A 108 ARAAGADVLHLGQRDL-P---V---NVARQILAPDTLIGR-STHDPDQVAAAAAGDADYFCVGP----CWPTPTKPGRAA 175 (243)
T ss_dssp HHHHTCSEEEECTTSS-C---H---HHHHHHSCTTCEEEE-EECSHHHHHHHHHSSCSEEEECC----SSCCCC-----C
T ss_pred HHHhCCCEEEecCCcC-C---H---HHHHHhhCCCCEEEE-eCCCHHHHHHHhhCCCCEEEEcC----ccCCCCCCCcch
Confidence 5567899887733211 1 1 23344442 344433 77899999999999999998752 111111111111
Q ss_pred ChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 335 GQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 335 p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
..+..+..+++.. ..++|+++.||| +..++..++.+||++|.+|+.|..+
T Consensus 176 ~gl~~l~~~~~~~-~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a 225 (243)
T 3o63_A 176 PGLGLVRVAAELG-GDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSA 225 (243)
T ss_dssp CCHHHHHHHHTC----CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTC
T ss_pred hhHHHHHHHHHhc-cCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 1233443333210 136999999999 9999999999999999999998653
No 196
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.98 E-value=5.9e-05 Score=70.89 Aligned_cols=125 Identities=16% Similarity=0.135 Sum_probs=83.2
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEE--EcccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVI--GGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi--~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
....++.+.++|+|.+.++...+. ....+.++.+++. ++..+ +=++.|.+.+..+.+.|+|++.+..+ .+
T Consensus 72 p~~~~~~~~~aGad~i~vh~~~~~-~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~-----~~ 143 (218)
T 3jr2_A 72 GAILSRMAFEAGADWITVSAAAHI-ATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRS-----RD 143 (218)
T ss_dssp HHHHHHHHHHHTCSEEEEETTSCH-HHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCCEEEEECC-----HH
T ss_pred HHHHHHHHHhcCCCEEEEecCCCH-HHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCccceeeeec-----cc
Confidence 344678889999999999875442 2234556666665 56554 33456788899998999998865211 00
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
....|. ......+..+++.+. .++|++++||| ++..+.+++.+||+++.+|+++.
T Consensus 144 ~~~~g~-~~~~~~l~~i~~~~~-~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~ 198 (218)
T 3jr2_A 144 AELAGI-GWTTDDLDKMRQLSA-LGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALA 198 (218)
T ss_dssp HHHHTC-CSCHHHHHHHHHHHH-TTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGS
T ss_pred cccCCC-cCCHHHHHHHHHHhC-CCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhc
Confidence 011111 012233444444432 46999999999 69999999999999999999874
No 197
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.98 E-value=3.7e-05 Score=77.72 Aligned_cols=121 Identities=17% Similarity=0.140 Sum_probs=85.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------------chhHHHHHHHHHHhCCCceEEEc-ccC----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------------SSFQIEMIKYAKKTYPELDVIGG-NVV---- 298 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------------~~~~~~~i~~l~~~~~~~~Vi~g-~V~---- 298 (505)
++.+.++.+.++|.|.|.|+.++|+ .+...+.++.+|+.++.-||.++ +..
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~ 241 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAH 241 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccC
Confidence 3556677788899999999987631 12457788888888742277663 110
Q ss_pred ----------CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 299 ----------TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 299 ----------t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
..+.++.+.++|+|+|.++.+. .+.+.. ..+++ ..++|||+.||+ ++.++.+
T Consensus 242 g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----------~~~~~~---~~ik~---~~~iPvi~~Ggi-t~e~a~~ 303 (361)
T 3gka_A 242 TMGDSDPAATFGHVARELGRRRIAFLFARESF-----------GGDAIG---QQLKA---AFGGPFIVNENF-TLDSAQA 303 (361)
T ss_dssp SCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-----------STTCCH---HHHHH---HHCSCEEEESSC-CHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-----------CCHHHH---HHHHH---HcCCCEEEeCCC-CHHHHHH
Confidence 1335678888999999986432 011222 22333 346899999999 9999999
Q ss_pred HHHhC-CCEEEecccccCC
Q 010640 369 ALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~ 386 (505)
++..| ||+|++|+.|+.-
T Consensus 304 ~l~~G~aD~V~iGR~~lad 322 (361)
T 3gka_A 304 ALDAGQADAVAWGKLFIAN 322 (361)
T ss_dssp HHHTTSCSEEEESHHHHHC
T ss_pred HHHcCCccEEEECHHhHhC
Confidence 99998 9999999999764
No 198
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.98 E-value=9e-05 Score=70.00 Aligned_cols=122 Identities=17% Similarity=0.117 Sum_probs=83.4
Q ss_pred HHHHHHHHHHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCCC--ceEEE-cccCCHHHHHHH----HHcCCCEEEE
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYPE--LDVIG-GNVVTMYQAQNL----IEAGVDGLRV 316 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~~--~~Vi~-g~V~t~e~a~~l----~~aGad~I~v 316 (505)
....++.+++.|+|.|.+...- |+...+.+.++.+++..++ +++|. -...+.+....+ .++|+|+|+.
T Consensus 97 Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKT 176 (239)
T 3ngj_A 97 KAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKT 176 (239)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEEC
Confidence 4456677888999999776643 4456678888888887643 45555 122465554444 7899999998
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
+.|-+ .+..++..+...++.. ..+++|.++|||++..|+.+.+.+||+-++..+
T Consensus 177 STGf~----------~ggAt~~dv~lmr~~v-g~~v~VKasGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 177 STGFG----------THGATPEDVKLMKDTV-GDKALVKAAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp CCSSS----------SCCCCHHHHHHHHHHH-GGGSEEEEESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred CCCCC----------CCCCCHHHHHHHHHhh-CCCceEEEeCCCCCHHHHHHHHHhcccceeccc
Confidence 74311 0123444444445544 346999999999999999999999999766554
No 199
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.98 E-value=6.7e-06 Score=79.08 Aligned_cols=58 Identities=21% Similarity=0.327 Sum_probs=53.2
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC---CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD---GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~---g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++ +++++.+++++.++.++|.+++++.+||||+ ++++|+||+.||+.+..
T Consensus 12 ~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~ 72 (250)
T 2d4z_A 12 NIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQ 72 (250)
T ss_dssp SCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred CCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHH
Confidence 4579999999 9999999999999999999999999999986 47999999999997643
No 200
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.97 E-value=0.00018 Score=67.06 Aligned_cols=108 Identities=24% Similarity=0.252 Sum_probs=85.5
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCccee
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~ 324 (505)
+.++..+.++.+++.|++++.+..... ...+.++.+++ +++.+.+|.+.+.+.++.+.++|+|++..+.
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k~~---~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~------ 91 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLRTE---KGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG------ 91 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECSST---HHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCSEEEESS------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCh---HHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC------
Confidence 455688899999999999999975433 34577777777 6888889999999999999999999995321
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
.. .++.+.++..++|++. |+.|+.++.+|+.+|||.|.+
T Consensus 92 ----------~d----~~v~~~~~~~g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 92 ----------LL----EEVAALAQARGVPYLP--GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp ----------CC----HHHHHHHHHHTCCEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred ----------CC----HHHHHHHHHhCCCEEe--cCCCHHHHHHHHHCCCCEEEE
Confidence 00 1334455557899998 799999999999999999988
No 201
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.97 E-value=6.8e-06 Score=73.04 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=53.5
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++ +++++.+++++.+++++|.++++..+||+|+ |+++|+||..|+++...
T Consensus 4 ~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 4 MIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp CCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 3578999998 9999999999999999999999999999998 99999999999988653
No 202
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.97 E-value=0.00015 Score=70.23 Aligned_cols=123 Identities=19% Similarity=0.148 Sum_probs=83.9
Q ss_pred HHHHHHHHHHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCCC--ceEEEc-ccCCHHH----HHHHHHcCCCEEEE
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYPE--LDVIGG-NVVTMYQ----AQNLIEAGVDGLRV 316 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~~--~~Vi~g-~V~t~e~----a~~l~~aGad~I~v 316 (505)
....++.+++.|+|.|.+...- |+...+.+.++.+++.... +.+|.- ...+.+. ++.+.++|+|+|+.
T Consensus 128 Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 207 (288)
T 3oa3_A 128 KVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKT 207 (288)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEc
Confidence 3456677889999999765542 4456778888888887633 455552 2346555 67778899999987
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHh--hcCCcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAA--QSGVPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~--~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
+.|-+ . +..++..+...++..+ ..+++|.++|||++..|+.+.+.+||+-++..+
T Consensus 208 STGf~-------~---~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 208 STGFN-------G---PGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp CCSSS-------S---CCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCCC-------C---CCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 74311 0 1133444444444443 246999999999999999999999999655443
No 203
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.97 E-value=7.9e-06 Score=68.87 Aligned_cols=55 Identities=22% Similarity=0.192 Sum_probs=51.3
Q ss_pred ccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhh
Q 010640 165 KIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLK 221 (505)
Q Consensus 165 ~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~ 221 (505)
++.++|++ +++++++++++.++++.|.+++.+.+||+|+|+++|+||.+|+++..
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~ 56 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAI 56 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHH
T ss_pred CHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHH
Confidence 46789998 99999999999999999999999999999989999999999998764
No 204
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.96 E-value=4.5e-06 Score=73.08 Aligned_cols=60 Identities=12% Similarity=-0.014 Sum_probs=54.3
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++..+++++.+++++.++++.|.++++..+||+|+ |+++|+||..|+++...
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 74 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTB
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 4578999995336999999999999999999999999999998 99999999999998764
No 205
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.96 E-value=2.5e-05 Score=67.99 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=53.0
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhh
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERL 220 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~ 220 (505)
..++.++|++..+++++.+++++.++++.|.+++...+||+|+ |+++|+||..|++..
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 3468899987667999999999999999999999999999999 999999999999864
No 206
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.96 E-value=3.2e-05 Score=78.77 Aligned_cols=128 Identities=15% Similarity=0.111 Sum_probs=85.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEcc-c-----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGGN-V----- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g~-V----- 297 (505)
++.+.++.+.++|.|.|.|+.++|+ + +...+.++.+|+.++.-||.++- .
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 3556667778899999999876531 0 12567788888877422777741 1
Q ss_pred -----C----CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 298 -----V----TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 298 -----~----t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
. ..+.++.|.++|+|+|.++.+. .... ..+ .....+..+ .+..++|||+.||| ++.++.+
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~--~~~~--~~~---~~~~~~~~i---k~~~~iPvi~~Ggi-~~~~a~~ 315 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNEPD--WIGG--DIT---YPEGFREQM---RQRFKGGLIYCGNY-DAGRAQA 315 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC----------C---CCTTHHHHH---HHHCCSEEEEESSC-CHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc--ccCC--CCc---chHHHHHHH---HHHCCCCEEEECCC-CHHHHHH
Confidence 0 2334788889999999986421 1100 011 012223333 33467999999999 7999999
Q ss_pred HHHhC-CCEEEecccccCC
Q 010640 369 ALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~ 386 (505)
++..| ||+|++|+.|+.-
T Consensus 316 ~l~~g~aD~V~igR~~l~~ 334 (377)
T 2r14_A 316 RLDDNTADAVAFGRPFIAN 334 (377)
T ss_dssp HHHTTSCSEEEESHHHHHC
T ss_pred HHHCCCceEEeecHHHHhC
Confidence 99998 9999999999864
No 207
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.95 E-value=6.2e-05 Score=77.28 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=88.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEc----cc--
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGG----NV-- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g----~V-- 297 (505)
++.+.++.+.++|.|.|.|+.++|+ + +...+.++.+|+.++..||.++ ..
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 3556677788899999999986531 1 2357788888888743377664 10
Q ss_pred --C-------CHHHHHHHHHcC------CCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCC
Q 010640 298 --V-------TMYQAQNLIEAG------VDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN 362 (505)
Q Consensus 298 --~-------t~e~a~~l~~aG------ad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~ 362 (505)
. ..+.++.|.++| +|+|.++.+.-.........-...+ ...+..+.+..+..++|||+.||| +
T Consensus 252 g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vk~~~~iPvi~~G~i-~ 329 (402)
T 2hsa_B 252 DAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSE-EEEARLMRTLRNAYQGTFICSGGY-T 329 (402)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHH-HHHHHHHHHHHHHCSSCEEEESSC-C
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCC-cchHHHHHHHHHHCCCCEEEeCCC-C
Confidence 0 234567888899 9999986431100000000000001 011222334444567999999999 9
Q ss_pred HHHHHHHHHhC-CCEEEecccccCC
Q 010640 363 SGHIVKALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 363 ~~di~kal~lG-A~~V~~G~~f~~~ 386 (505)
+.++.++|..| ||+|++|++|+.-
T Consensus 330 ~~~a~~~l~~g~aD~V~igR~~l~d 354 (402)
T 2hsa_B 330 RELGIEAVAQGDADLVSYGRLFISN 354 (402)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHCCCCceeeecHHHHhC
Confidence 99999999998 9999999999764
No 208
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.94 E-value=6.4e-06 Score=72.58 Aligned_cols=101 Identities=10% Similarity=0.021 Sum_probs=70.0
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEe-eC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceE
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLE-KD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMV 239 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVv-d~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v 239 (505)
..++.++|+++.+++++++++++.+++++|.+++...+||+ |+ |+++|+||..|+++....... .+..+.- +-.+
T Consensus 19 ~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~~-~~v~~~m-~~~~ 96 (153)
T 3oco_A 19 DKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDK-AKISTIM-RDIV 96 (153)
T ss_dssp HCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHTT-SBGGGTC-BCCE
T ss_pred CCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCCC-CcHHHHh-CCCe
Confidence 56799999865589999999999999999999999999999 53 899999999999976432111 0011111 1112
Q ss_pred EEeecCCccHHHHHHHHHHcCccEEEEe
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
.+. ......+.++.+.+.+...+.+.
T Consensus 97 ~v~--~~~~l~~~~~~m~~~~~~~lpVv 122 (153)
T 3oco_A 97 SVP--ENMKVPDVMEEMSAHRVPMAIVI 122 (153)
T ss_dssp EEE--TTSBHHHHHHHHHHTTCSCEEEE
T ss_pred EEC--CCCCHHHHHHHHHHcCCcEEEEE
Confidence 122 23345666777777776665553
No 209
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.94 E-value=6.9e-05 Score=69.84 Aligned_cols=117 Identities=21% Similarity=0.215 Sum_probs=74.8
Q ss_pred HHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEcc-CCcceeecccccc
Q 010640 253 LEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGM-GSGSICTTQEVCA 331 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~-g~g~~~~~~~~~g 331 (505)
++.+.+.|++.+.+..... . .+.++.+. ++..+.+ .+.+.+++..+.+.|+|++.++. .++.. ..+
T Consensus 79 ~~~a~~~gad~v~l~~~~~-~---~~~~~~~~---~~~~~~v-~~~t~~e~~~~~~~g~d~i~~~~~~~~~~-----~~~ 145 (215)
T 1xi3_A 79 VDVALAVDADGVQLGPEDM-P---IEVAKEIA---PNLIIGA-SVYSLEEALEAEKKGADYLGAGSVFPTKT-----KED 145 (215)
T ss_dssp HHHHHHHTCSEEEECTTSC-C---HHHHHHHC---TTSEEEE-EESSHHHHHHHHHHTCSEEEEECSSCC---------C
T ss_pred HHHHHHcCCCEEEECCccC-C---HHHHHHhC---CCCEEEE-ecCCHHHHHHHHhcCCCEEEEcCCccCCC-----CCC
Confidence 4567788999997732211 1 23333332 2444433 56788888888899999998752 11110 011
Q ss_pred cCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 332 VGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 332 ~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
........+.++++ ..++|++++|||. +.++.+++.+||++|.+|+.|..+
T Consensus 146 ~~~~~~~~l~~l~~---~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 196 (215)
T 1xi3_A 146 ARVIGLEGLRKIVE---SVKIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGA 196 (215)
T ss_dssp CCCCHHHHHHHHHH---HCSSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTS
T ss_pred CCCcCHHHHHHHHH---hCCCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCC
Confidence 11123344444333 3479999999999 999999999999999999998643
No 210
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.94 E-value=1.1e-05 Score=72.93 Aligned_cols=100 Identities=11% Similarity=0.013 Sum_probs=69.0
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC--CeeeeEEeechhhhhhcCCCCCCCccCCCCcceE
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD--GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMV 239 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~--g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v 239 (505)
...++.++|++..+++++++++++.+++++|.++++..+||+|+ |+++|+||..|++.......... .. ..... +
T Consensus 34 ~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~~~~-v~-~~~~~-~ 110 (173)
T 3ocm_A 34 AERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVR-RN-RLRDP-I 110 (173)
T ss_dssp TTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSSCC-GG-GSBCC-C
T ss_pred CCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCCcch-hH-hcCCC-e
Confidence 45689999986557899999999999999999999999999976 79999999999998752110000 11 10111 1
Q ss_pred EEeecCCccHHHHHHHHHHcCccEEEE
Q 010640 240 GAAIGTRESDKERLEHLVKAGVNVVVL 266 (505)
Q Consensus 240 ~a~i~~~~~~~e~~~~lieaGad~I~i 266 (505)
.+.......+.++.+.+.+...+.+
T Consensus 111 --~v~~~~~l~~al~~m~~~~~~~~~V 135 (173)
T 3ocm_A 111 --IVHESIGILRLMDTLKRSRGQLVLV 135 (173)
T ss_dssp --EECGGGCHHHHHHHHHHSTTCCEEE
T ss_pred --EECCCCcHHHHHHHHHHcCCeEEEE
Confidence 1112233556666666777665544
No 211
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.93 E-value=4e-05 Score=78.05 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=85.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEccc------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGGNV------ 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g~V------ 297 (505)
++.+.++.+.++|.|.|.|+.++|+ + +...+.++.+|+.++.-||.++--
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 4556677788899999999987642 0 125777888888874227766310
Q ss_pred ----C-----CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 298 ----V-----TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 298 ----~-----t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
. ..+.++.|.++|+|+|.+..+.-... ......+ +. +..+ .+..++|||+.||| ++.++.+
T Consensus 248 g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~-~~~~~~~--~~---~~~v---r~~~~iPvi~~G~i-~~~~a~~ 317 (376)
T 1icp_A 248 EAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA-WEKIECT--ES---LVPM---RKAYKGTFIVAGGY-DREDGNR 317 (376)
T ss_dssp TCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC-------CC--CC---SHHH---HHHCCSCEEEESSC-CHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC-CCccccH--HH---HHHH---HHHcCCCEEEeCCC-CHHHHHH
Confidence 0 13456778889999999864311000 0000011 11 2222 33467999999999 9999999
Q ss_pred HHHhC-CCEEEecccccCC
Q 010640 369 ALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~ 386 (505)
+|..| ||+|++|+.|+.-
T Consensus 318 ~l~~g~aD~V~~gR~~l~~ 336 (376)
T 1icp_A 318 ALIEDRADLVAYGRLFISN 336 (376)
T ss_dssp HHHTTSCSEEEESHHHHHC
T ss_pred HHHCCCCcEEeecHHHHhC
Confidence 99998 9999999999764
No 212
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.92 E-value=1.1e-05 Score=69.34 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=53.3
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechh-hhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDV-ERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~di-l~~~~ 222 (505)
..++.++|++ +++++.+++++.++++.|.+++...+||+|+ |+++|+||.+|+ ++...
T Consensus 7 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 7 NIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp TCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred cCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 4578999998 9999999999999999999999999999998 999999999999 87643
No 213
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.87 E-value=5.4e-05 Score=68.78 Aligned_cols=57 Identities=12% Similarity=0.176 Sum_probs=53.0
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
.+++++|++ +++++.+++++.+++++|.+++...+||+|+ |+++|+||.+||++...
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 568899998 9999999999999999999999999999997 99999999999998643
No 214
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.86 E-value=1.1e-05 Score=71.03 Aligned_cols=60 Identities=8% Similarity=-0.005 Sum_probs=53.9
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++..+++++.+++++.++++.|.+++++.+||+|+ |+++|+||..|+++...
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSB
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 4578999985447889999999999999999999999999998 99999999999998754
No 215
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.85 E-value=1.4e-05 Score=68.41 Aligned_cols=54 Identities=11% Similarity=0.242 Sum_probs=50.7
Q ss_pred ccccccc---cCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhh
Q 010640 165 KIFDYMR---DCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERL 220 (505)
Q Consensus 165 ~v~~im~---~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~ 220 (505)
+++++|+ + +++++++++++.++++.|.+++...+||+|+|+++|+||..|+++.
T Consensus 7 ~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~ 63 (135)
T 2rc3_A 7 TVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRK 63 (135)
T ss_dssp BHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred eHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHH
Confidence 6889998 6 8999999999999999999999999999988999999999999863
No 216
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.85 E-value=0.00027 Score=68.43 Aligned_cols=123 Identities=15% Similarity=0.185 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCccEEEE-eCCCCCchhHHHHHHHHHHhCCCce-E-EEcccCCHHHHHHHHHcCCCEEEE-ccCC-cce
Q 010640 249 DKERLEHLVKAGVNVVVL-DSSQGNSSFQIEMIKYAKKTYPELD-V-IGGNVVTMYQAQNLIEAGVDGLRV-GMGS-GSI 323 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i-~~~~g~~~~~~~~i~~l~~~~~~~~-V-i~g~V~t~e~a~~l~~aGad~I~v-~~g~-g~~ 323 (505)
....++.+.++|+|.+.+ |.+. +...++.+..++. ++. + ++....+.+..+.+.+.+.++|.. +.-| ++.
T Consensus 114 ~~~f~~~~~~aGvdGvIipDlp~---ee~~~~~~~~~~~--gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~ 188 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIADVPT---NESQPFVAAAEKF--GIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGA 188 (271)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCG---GGCHHHHHHHHHT--TCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC-----
T ss_pred HHHHHHHHHHCCCCEEEECCCCH---HHHHHHHHHHHHc--CCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCc
Confidence 456788899999999766 3332 2344555555555 443 2 344556788889999998888876 3211 111
Q ss_pred eecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 324 CTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 324 ~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
+ .+...+....+..+ .+..++|++..+||.+++++.+++..|||+|.+||.|.
T Consensus 189 ---~--~~~~~~~~~~v~~v---r~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 189 ---E--TKANMPVHALLERL---QQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp --------CCHHHHHHHHHH---HHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred ---c--cCCchhHHHHHHHH---HHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 1 01111112223333 33347999999999999999999999999999999985
No 217
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.85 E-value=9.8e-06 Score=71.75 Aligned_cols=60 Identities=10% Similarity=0.023 Sum_probs=54.3
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++..+++++.+++++.+++++|.++++..+||+|+ |+++|+||..|+++...
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 73 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIF 73 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHB
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhh
Confidence 4578899986556899999999999999999999999999998 99999999999998764
No 218
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.85 E-value=8.9e-05 Score=70.33 Aligned_cols=174 Identities=11% Similarity=0.065 Sum_probs=106.2
Q ss_pred HHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccE
Q 010640 185 LGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNV 263 (505)
Q Consensus 185 l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~ 263 (505)
..+..+.. +.+...+-|..| ..+-|= .+|+....... .+++--..-.. ..-++......|+|+
T Consensus 66 p~~iA~~~-~~GA~aiSVLTd~~~F~Gs--~~~L~~vr~~v-----------~lPvLrKDFii--d~yQI~eAr~~GADa 129 (258)
T 4a29_A 66 PIEYAKFM-ERYAVGLSITTEEKYFNGS--YETLRKIASSV-----------SIPILMSDFIV--KESQIDDAYNLGADT 129 (258)
T ss_dssp HHHHHHHH-TTTCSEEEEECCSTTTCCC--HHHHHHHHTTC-----------SSCEEEESCCC--SHHHHHHHHHHTCSE
T ss_pred HHHHHHHH-hCCCeEEEEeCCCCCCCCC--HHHHHHHHHhc-----------CCCEeeccccc--cHHHHHHHHHcCCCe
Confidence 34444433 467778888766 556663 34544443221 12221111111 123344455679999
Q ss_pred EEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHH
Q 010640 264 VVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKV 343 (505)
Q Consensus 264 I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v 343 (505)
+-+-.+.=......++++..++. +..+++ +|.+.++...+.++|++.|-+- .|++..+.+. +.....+
T Consensus 130 ILLI~a~L~~~~l~~l~~~A~~l--Gl~~Lv-EVh~~~El~rAl~~~a~iIGIN--------NRnL~tf~vd-l~~t~~L 197 (258)
T 4a29_A 130 VLLIVKILTERELESLLEYARSY--GMEPLI-LINDENDLDIALRIGARFIGIM--------SRDFETGEIN-KENQRKL 197 (258)
T ss_dssp EEEEGGGSCHHHHHHHHHHHHHT--TCCCEE-EESSHHHHHHHHHTTCSEEEEC--------SBCTTTCCBC-HHHHHHH
T ss_pred eehHHhhcCHHHHHHHHHHHHHH--hHHHHH-hcchHHHHHHHhcCCCcEEEEe--------CCCccccccC-HHHHHHH
Confidence 87654332222344444444444 666666 8999999999999999988442 2444433332 2323333
Q ss_pred HHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCC
Q 010640 344 SSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGST 387 (505)
Q Consensus 344 ~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~ 387 (505)
....+ .++.+|+.+||.++.|+.++..+|+++|.+|..|+.+.
T Consensus 198 ~~~ip-~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~ 240 (258)
T 4a29_A 198 ISMIP-SNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNP 240 (258)
T ss_dssp HTTSC-TTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCT
T ss_pred HhhCC-CCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCC
Confidence 33332 25889999999999999999999999999999997643
No 219
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.84 E-value=0.00011 Score=71.37 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=75.2
Q ss_pred HHHHHHHHHcCccEEEEe--CCCCCchhHHHHHHHHHHhC--CCceEEEccc---------CCH---HHH-HHHHHcCCC
Q 010640 250 KERLEHLVKAGVNVVVLD--SSQGNSSFQIEMIKYAKKTY--PELDVIGGNV---------VTM---YQA-QNLIEAGVD 312 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~--~~~g~~~~~~~~i~~l~~~~--~~~~Vi~g~V---------~t~---e~a-~~l~~aGad 312 (505)
.+.++.+++.|++.+.++ .........++.++.+.+.. .++++++... .+. +.+ +.+.++|+|
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad 181 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGAD 181 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCC
Confidence 456777889999999333 22222223333333333321 1677776320 233 344 778899999
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCC--HHH----HHHHHHhCCCEEEecccccCC
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN--SGH----IVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~--~~d----i~kal~lGA~~V~~G~~f~~~ 386 (505)
+|.++.. ..+..+.++. +..++||++.|||.. ..| +.+++.+||++|.+|+.|..+
T Consensus 182 ~i~~~~~---------------~~~~~l~~i~---~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~ 243 (273)
T 2qjg_A 182 IVKTSYT---------------GDIDSFRDVV---KGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQH 243 (273)
T ss_dssp EEEECCC---------------SSHHHHHHHH---HHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTS
T ss_pred EEEECCC---------------CCHHHHHHHH---HhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCC
Confidence 9977520 1234444443 345799999999995 777 777778999999999998653
No 220
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.84 E-value=0.00013 Score=75.27 Aligned_cols=133 Identities=19% Similarity=0.163 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c------hhHHHHHHHHHHhC-----CCceEEEcc-
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S------SFQIEMIKYAKKTY-----PELDVIGGN- 296 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~------~~~~~~i~~l~~~~-----~~~~Vi~g~- 296 (505)
++.+.+..+.++|.|.|.|+.++|+ + +...+.++.+++.+ ++.||.++-
T Consensus 171 ~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis 250 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRAT 250 (419)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecc
Confidence 3556677788999999999976521 1 23466777777764 255676531
Q ss_pred ---------cCC----HHHHHHHHH-cCCCEEEEccCCcc-eeecccccc--cCcChHHHHHHHHHHHhhcCCcEEecCC
Q 010640 297 ---------VVT----MYQAQNLIE-AGVDGLRVGMGSGS-ICTTQEVCA--VGRGQATAVYKVSSIAAQSGVPVIADGG 359 (505)
Q Consensus 297 ---------V~t----~e~a~~l~~-aGad~I~v~~g~g~-~~~~~~~~g--~g~p~~~~l~~v~~~~~~~~ipvIa~GG 359 (505)
-.+ .+-++.|.+ +|+|+|.++.+... ..+.....+ ...+. ...+++... .++|||+.||
T Consensus 251 ~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~---a~~Ik~~v~-~~iPVI~~Gg 326 (419)
T 3l5a_A 251 PEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPV---NQIVYEHLA-GRIPLIASGG 326 (419)
T ss_dssp SCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBH---HHHHHHHHT-TSSCEEECSS
T ss_pred cccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHH---HHHHHHHcC-CCCeEEEECC
Confidence 112 345677888 99999999753210 001100111 11222 223333321 1599999999
Q ss_pred CCCHHHHHHHHHhCCCEEEecccccC
Q 010640 360 ISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 360 I~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
|.++.++.+++.. ||+|++|+.|+.
T Consensus 327 I~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 327 INSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp CCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred CCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 9999999999999 999999999975
No 221
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.81 E-value=1.1e-05 Score=68.90 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=50.7
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhh
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVER 219 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~ 219 (505)
.++.++|++ +++++++++++.++++.|.+++...+||+|+ |+++|+||..|++.
T Consensus 8 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHH
T ss_pred cCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHH
Confidence 468899998 9999999999999999999999999999988 99999999999984
No 222
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.80 E-value=2.6e-05 Score=68.90 Aligned_cols=58 Identities=9% Similarity=0.150 Sum_probs=53.7
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHCCCCe-eEEeeCCeeeeEEeechhhhhh
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDF-VVLEKDGERLDVVTREDVERLK 221 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~-lpVvd~g~l~GiIt~~dil~~~ 221 (505)
...++.++|++ +++++.+++++.+|+++|.+++.+. +||+|+++++|+||..|+++..
T Consensus 14 ~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~ 72 (157)
T 1o50_A 14 KVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVS 72 (157)
T ss_dssp BHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHH
T ss_pred ccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHH
Confidence 34578999998 9999999999999999999999999 9999888999999999999864
No 223
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.80 E-value=0.00016 Score=70.19 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=82.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc---------------------hhHHHHHHHHHHhCCCceEEE-c--c-c---CC
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS---------------------SFQIEMIKYAKKTYPELDVIG-G--N-V---VT 299 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~---------------------~~~~~~i~~l~~~~~~~~Vi~-g--~-V---~t 299 (505)
...+.++.+.++ +|+|++..++..+ ....+.++.+|+. +++|+++ + + + ..
T Consensus 31 ~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~~~Pii~m~y~n~v~~~g~ 108 (271)
T 1ujp_A 31 GFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-TEKPLFLMTYLNPVLAWGP 108 (271)
T ss_dssp HHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CCSCEEEECCHHHHHHHCH
T ss_pred HHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHhhH
Confidence 355677778888 9999998755322 2356788889888 4788876 1 2 2 23
Q ss_pred HHHHHHHHHcCCCEEEEc-cCCcc--------------------eeeccc--------------------ccccCcChHH
Q 010640 300 MYQAQNLIEAGVDGLRVG-MGSGS--------------------ICTTQE--------------------VCAVGRGQAT 338 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~-~g~g~--------------------~~~~~~--------------------~~g~g~p~~~ 338 (505)
...++.+.++|+|++.+. ..... .+.+.. .+|...+...
T Consensus 109 ~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~ 188 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPE 188 (271)
T ss_dssp HHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC------------
T ss_pred HHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCc
Confidence 456788999999988764 21000 000000 1111110000
Q ss_pred H-HHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 339 A-VYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 339 ~-l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
. ...+.+..+..++||++.|||.+++++.++ .|||+|.+|+.|.
T Consensus 189 ~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~ 233 (271)
T 1ujp_A 189 EVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGSALV 233 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHH
T ss_pred cHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHh
Confidence 0 112233333457999999999999999996 9999999999985
No 224
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.78 E-value=2.6e-05 Score=67.27 Aligned_cols=58 Identities=22% Similarity=0.193 Sum_probs=52.3
Q ss_pred cccccc---ccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFD---YMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~---im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
+.++.+ +|.+ +++++.+++++.++++.|.+++...+||+|+ |+++|+||..|+++...
T Consensus 7 ~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 68 (144)
T 2nyc_A 7 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 68 (144)
T ss_dssp GSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhc
Confidence 446677 8887 8999999999999999999999999999998 99999999999998653
No 225
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.77 E-value=0.0001 Score=69.45 Aligned_cols=116 Identities=18% Similarity=0.189 Sum_probs=72.6
Q ss_pred HHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEcc-CCcceeecccccc
Q 010640 253 LEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGM-GSGSICTTQEVCA 331 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~-g~g~~~~~~~~~g 331 (505)
++.+.+.|++.+.+.. ... . +..+++.+ +..++.-++.+.+++..+.+.|+|++.++. ..+. + ..+
T Consensus 87 ~~~a~~~gad~v~l~~--~~~-~----~~~~~~~~-g~~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~---~--~~~ 153 (227)
T 2tps_A 87 VELALNLKADGIHIGQ--EDA-N----AKEVRAAI-GDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTE---T--KKD 153 (227)
T ss_dssp HHHHHHHTCSEEEECT--TSS-C----HHHHHHHH-TTSEEEEEECSHHHHHHHHHHTCSEEEECCSSCCC---S--SSS
T ss_pred HHHHHHcCCCEEEECC--Ccc-C----HHHHHHhc-CCcEEEEecCCHHHHHHHHhCCCCEEEECCCcCCC---C--CCC
Confidence 4567788999998722 111 1 23344433 222222245788888889999999998741 1110 0 011
Q ss_pred cCc-ChHHHHHHHHHHHhhcC-CcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 332 VGR-GQATAVYKVSSIAAQSG-VPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 332 ~g~-p~~~~l~~v~~~~~~~~-ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.+. .....+.+++ +..+ +|++++|||. +.++.+++.+||++|.+|+.|..
T Consensus 154 ~~~~~~~~~l~~~~---~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 154 TRAVQGVSLIEAVR---RQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp CCCCCTTHHHHHHH---HTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHT
T ss_pred CCCccCHHHHHHHH---HhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhc
Confidence 011 1123333333 3345 9999999999 99999999999999999999864
No 226
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.76 E-value=9.1e-05 Score=69.84 Aligned_cols=120 Identities=16% Similarity=0.262 Sum_probs=82.5
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v 316 (505)
+.+++.. .- ..+.++.++++|+|+++. .+. ..+.++..++. +.+++.| +.|++++..+.++|+|++.+
T Consensus 69 l~vgaGt--vl-~~d~~~~A~~aGAd~v~~--p~~----d~~v~~~ar~~--g~~~i~G-v~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 69 FLIAAGT--VL-TAEQVVLAKSSGADFVVT--PGL----NPKIVKLCQDL--NFPITPG-VNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp CEEEEES--CC-SHHHHHHHHHHTCSEEEC--SSC----CHHHHHHHHHT--TCCEECE-ECSHHHHHHHHHTTCCEEEE
T ss_pred cEEeeCc--Ee-eHHHHHHHHHCCCCEEEE--CCC----CHHHHHHHHHh--CCCEEec-cCCHHHHHHHHHCCCCEEEE
Confidence 4555553 21 348889999999999954 221 23445555663 7788886 88999999999999999976
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHh-CCCEEEeccccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVL-GASTVMMGSFLA 384 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~l-GA~~V~~G~~f~ 384 (505)
.+ ... ...+..+..++.... ++|+++.||| +...+...+++ |+++|. |+.+.
T Consensus 137 --Fp-----a~~-----~gG~~~lk~l~~~~~--~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~ 189 (224)
T 1vhc_A 137 --FP-----AEA-----SGGVKMIKALLGPYA--QLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFV 189 (224)
T ss_dssp --TT-----TTT-----TTHHHHHHHHHTTTT--TCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGG
T ss_pred --ee-----Ccc-----ccCHHHHHHHHhhCC--CCeEEEECCc-CHHHHHHHHhcCCCEEEE-Echhc
Confidence 11 000 111334444433221 6999999999 56889999998 999999 88875
No 227
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.75 E-value=0.00011 Score=68.27 Aligned_cols=121 Identities=24% Similarity=0.274 Sum_probs=84.6
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCc------eEEEcccCCHHHHHHHHHcC
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPEL------DVIGGNVVTMYQAQNLIEAG 310 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~------~Vi~g~V~t~e~a~~l~~aG 310 (505)
..+|+..- - ..+.++.++++|+++++. .+.. .+.++..++. ++ |++. ++.|++++..+.++|
T Consensus 65 ~~IGAGTV--l-t~~~a~~ai~AGA~fivs---P~~~---~evi~~~~~~--~v~~~~~~~~~P-G~~TptE~~~A~~~G 132 (217)
T 3lab_A 65 AIVGAGTV--C-TADDFQKAIDAGAQFIVS---PGLT---PELIEKAKQV--KLDGQWQGVFLP-GVATASEVMIAAQAG 132 (217)
T ss_dssp SEEEEECC--C-SHHHHHHHHHHTCSEEEE---SSCC---HHHHHHHHHH--HHHCSCCCEEEE-EECSHHHHHHHHHTT
T ss_pred CeEeeccc--c-CHHHHHHHHHcCCCEEEe---CCCc---HHHHHHHHHc--CCCccCCCeEeC-CCCCHHHHHHHHHcC
Confidence 56666532 2 468888999999999975 2222 3455555555 57 8887 679999999999999
Q ss_pred CCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 311 VDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 311 ad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
+|++++= + ... .+.+..+..++... -++|+++.|||. ...+...+++||.++..|+.+.
T Consensus 133 ad~vK~F--P-----a~~-----~gG~~~lkal~~p~--p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 133 ITQLKCF--P-----ASA-----IGGAKLLKAWSGPF--PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp CCEEEET--T-----TTT-----TTHHHHHHHHHTTC--TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred CCEEEEC--c-----ccc-----ccCHHHHHHHHhhh--cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 9999762 1 000 11123343333322 158999999998 8899999999999888887664
No 228
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.74 E-value=1.5e-05 Score=71.82 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=51.8
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 164 VKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 164 ~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
.++.++|++..+++++.+++++.+++++|.+++...+||+|+ |+++|+||..||++..
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 62 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALD 62 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhh
Confidence 357888987556899999999999999999999999999998 9999999999998753
No 229
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.74 E-value=0.00019 Score=73.00 Aligned_cols=125 Identities=14% Similarity=0.062 Sum_probs=85.5
Q ss_pred cHHHHHHHHH-HcCccEEEEeCCCCC---------------------c-----hhHHHHHHHHHHhCCCceEEEc----c
Q 010640 248 SDKERLEHLV-KAGVNVVVLDSSQGN---------------------S-----SFQIEMIKYAKKTYPELDVIGG----N 296 (505)
Q Consensus 248 ~~~e~~~~li-eaGad~I~i~~~~g~---------------------~-----~~~~~~i~~l~~~~~~~~Vi~g----~ 296 (505)
++.+.++.+. ++|.|.|.|+.++|+ + +...+.++.+|+.++.-+|.++ .
T Consensus 175 ~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~ 254 (379)
T 3aty_A 175 LFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLN 254 (379)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccc
Confidence 3556677788 899999999876531 1 1346777888887643366662 1
Q ss_pred ----c---CC----HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHH
Q 010640 297 ----V---VT----MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGH 365 (505)
Q Consensus 297 ----V---~t----~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~d 365 (505)
. .+ .+.++.+.++|+|+|.++.+.-. . . +.|. . +.+..+..++|||+.||| ++.+
T Consensus 255 ~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~---~---~--~~~~-~----~~~ir~~~~iPvi~~G~i-t~~~ 320 (379)
T 3aty_A 255 GVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV---N---Q--QIGD-V----VAWVRGSYSGVKISNLRY-DFEE 320 (379)
T ss_dssp CGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT---S---C--CCCC-H----HHHHHTTCCSCEEEESSC-CHHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC---C---C--CccH-H----HHHHHHHCCCcEEEECCC-CHHH
Confidence 0 12 34467777899999998743210 0 1 1232 2 333444567999999999 9999
Q ss_pred HHHHHHhC-CCEEEecccccCC
Q 010640 366 IVKALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 366 i~kal~lG-A~~V~~G~~f~~~ 386 (505)
+.+++..| ||+|++|+.|+.-
T Consensus 321 a~~~l~~g~aD~V~igR~~l~~ 342 (379)
T 3aty_A 321 ADQQIREGKVDAVAFGAKFIAN 342 (379)
T ss_dssp HHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHcCCCeEEEecHHHHhC
Confidence 99999998 9999999999863
No 230
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.74 E-value=2.4e-05 Score=69.79 Aligned_cols=59 Identities=19% Similarity=0.279 Sum_probs=53.1
Q ss_pred ccccccccccC-CCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhh
Q 010640 163 KVKIFDYMRDC-SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLK 221 (505)
Q Consensus 163 ~~~v~~im~~~-~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~ 221 (505)
..++.++|++. .+++++.+++++.++++.|.++++..+||+|+ |+++|+||..|+++..
T Consensus 23 ~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 83 (165)
T 3fhm_A 23 ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAV 83 (165)
T ss_dssp SCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred hcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 46799999852 26899999999999999999999999999998 9999999999998764
No 231
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.73 E-value=0.00012 Score=81.07 Aligned_cols=138 Identities=12% Similarity=0.073 Sum_probs=86.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------------chhHHHHHHHHHHhCC-CceEEEcc------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------------SSFQIEMIKYAKKTYP-ELDVIGGN------ 296 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------------~~~~~~~i~~l~~~~~-~~~Vi~g~------ 296 (505)
++.+.++.+.++|.|.|.||.++|+ .+...+.++.+|+.++ +.||.++-
T Consensus 150 ~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~ 229 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVY 229 (729)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCc
Confidence 3556677788899999999987631 1236778888888763 66776631
Q ss_pred ----cC----CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 297 ----VV----TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 297 ----V~----t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
.. ..+.++.+.+ |+|++.++.+...............|....+..+.+..+..++|||+.|||.++.++.+
T Consensus 230 ~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~ 308 (729)
T 1o94_A 230 GPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIE 308 (729)
T ss_dssp CTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHH
Confidence 11 1233444444 89999886432100000000000001100122233344456899999999999999999
Q ss_pred HHHhC-CCEEEecccccCC
Q 010640 369 ALVLG-ASTVMMGSFLAGS 386 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~ 386 (505)
++..| ||+|++|++|+.-
T Consensus 309 ~l~~g~aD~V~~gR~~l~~ 327 (729)
T 1o94_A 309 IVTKGYADIIGCARPSIAD 327 (729)
T ss_dssp HHHTTSCSBEEESHHHHHC
T ss_pred HHHCCCCCEEEeCchhhcC
Confidence 99998 9999999988753
No 232
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.73 E-value=2.8e-05 Score=68.75 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=53.4
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC---CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD---GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~---g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++ +++++++++++.+++++|.+++++.+||+|+ |+++|+||..|+++...
T Consensus 12 ~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 12 HVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp SCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 4678999998 9999999999999999999999999999983 89999999999998764
No 233
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.72 E-value=0.00078 Score=62.33 Aligned_cols=122 Identities=18% Similarity=0.168 Sum_probs=76.6
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCCHHH-HHHHHHcCCCEEEEccCCcceeec
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVTMYQ-AQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t~e~-a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
...++.+.++|+|.+.+|...+. ....+.++.+++. +.++.+ -+..++++ ++.+.+.|+|++.+..+-.
T Consensus 67 ~~~~~~a~~~Gad~v~vh~~~~~-~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~----- 138 (207)
T 3ajx_A 67 ELEADIAFKAGADLVTVLGSADD-STIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLD----- 138 (207)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCH-HHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHH-----
T ss_pred HHHHHHHHhCCCCEEEEeccCCh-HHHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEEEEeccc-----
Confidence 34578888999999999875542 2233445555554 555533 12225555 6677788999984431100
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
... .|.+... ..+++.+.. ++|+++.|||. +..+.+++.+||++|.+|+.+..
T Consensus 139 ~~~--~g~~~~~--~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 139 EQA--KPGFDLN--GLLAAGEKA-RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp HHT--STTCCTH--HHHHHHHHH-TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHT
T ss_pred ccc--cCCCchH--HHHHHhhCC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccC
Confidence 001 1111111 233443332 58999999998 78899999999999999999864
No 234
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.71 E-value=0.00014 Score=68.03 Aligned_cols=119 Identities=21% Similarity=0.298 Sum_probs=80.9
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v 316 (505)
+.+++.. . -..+.++.++++|+|+++. .+ .. .+.++..++ + +.+++.| +.|++++..+.++|+|++.+
T Consensus 68 ~~vgagt-v--i~~d~~~~A~~aGAd~v~~--p~-~d---~~v~~~~~~-~-g~~~i~G-~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 68 AIVGAGT-V--LNPQQLAEVTEAGAQFAIS--PG-LT---EPLLKAATE-G-TIPLIPG-ISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp SEEEEES-C--CSHHHHHHHHHHTCSCEEE--SS-CC---HHHHHHHHH-S-SSCEEEE-ESSHHHHHHHHHTTCCEEEE
T ss_pred CEEeeCE-E--EEHHHHHHHHHcCCCEEEc--CC-CC---HHHHHHHHH-h-CCCEEEe-cCCHHHHHHHHHCCCCEEEE
Confidence 4555543 1 1348889999999999975 22 11 233344444 3 6788876 88999999999999999976
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHh-CCCEEEeccccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVL-GASTVMMGSFLA 384 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~l-GA~~V~~G~~f~ 384 (505)
.+ .. .. ..+..+..+ .... ++|+++.||| +...+...+.+ |+++|. |+.+.
T Consensus 136 --Fp-----a~---~~--gG~~~lk~i---~~~~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~ 188 (214)
T 1wbh_A 136 --FP-----AE---AN--GGVKALQAI---AGPFSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLV 188 (214)
T ss_dssp --TT-----TT---TT--THHHHHHHH---HTTCTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGS
T ss_pred --ec-----Cc---cc--cCHHHHHHH---hhhCCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-ecccc
Confidence 11 00 00 113334333 3334 6999999999 56889999998 899999 88774
No 235
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.70 E-value=0.00012 Score=68.97 Aligned_cols=119 Identities=16% Similarity=0.241 Sum_probs=80.3
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v 316 (505)
+.+++.. . -..+.++.++++|+|+++. . +.. .+.++..++ + +.+++.| +.|++++..+.++|+|++.+
T Consensus 78 ~~igagt--v-l~~d~~~~A~~aGAd~v~~--p-~~d---~~v~~~~~~-~-g~~~i~G-~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 78 LCVGAGT--V-LDRSMFAAVEAAGAQFVVT--P-GIT---EDILEAGVD-S-EIPLLPG-ISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp SEEEEEC--C-CSHHHHHHHHHHTCSSEEC--S-SCC---HHHHHHHHH-C-SSCEECE-ECSHHHHHHHHTTTCCEEEE
T ss_pred cEEeeCe--E-eeHHHHHHHHHCCCCEEEe--C-CCC---HHHHHHHHH-h-CCCEEEe-eCCHHHHHHHHHCCCCEEEE
Confidence 4555554 2 1448889999999999964 2 222 233333334 3 6788876 89999999999999999966
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHH-hCCCEEEeccccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALV-LGASTVMMGSFLA 384 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~-lGA~~V~~G~~f~ 384 (505)
.+ ... . ..+..+. +.+... ++|+++.||| +...+...+. .||++|. |+.+.
T Consensus 146 --FP-----a~~---~--~G~~~lk---~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~ 198 (225)
T 1mxs_A 146 --FP-----AEI---S--GGVAAIK---AFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWML 198 (225)
T ss_dssp --TT-----HHH---H--THHHHHH---HHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTS
T ss_pred --cc-----Ccc---c--cCHHHHH---HHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-Echhc
Confidence 11 000 0 0122333 333334 6999999999 6678999999 6999999 98774
No 236
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.70 E-value=0.00072 Score=65.55 Aligned_cols=121 Identities=12% Similarity=0.137 Sum_probs=94.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEccc-CCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNV-VTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V-~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+..+.++.+.+.|++++.+.+..+...+..+.++.+++.. ++||+.+.. .+......+..+|+|+|.+...
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a------- 144 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLLLIVA------- 144 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGG-------
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEEEecc-------
Confidence 4678888899999999999777666666778888898886 899998765 4777788889999999976421
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
. .+ ...+.++.+.++..++.++. .+.|..++.+|+.+||+.++++.+.+.
T Consensus 145 -~-----l~-~~~l~~l~~~a~~lGl~~lv--ev~t~ee~~~A~~~Gad~IGv~~r~l~ 194 (272)
T 3qja_A 145 -A-----LE-QSVLVSMLDRTESLGMTALV--EVHTEQEADRALKAGAKVIGVNARDLM 194 (272)
T ss_dssp -G-----SC-HHHHHHHHHHHHHTTCEEEE--EESSHHHHHHHHHHTCSEEEEESBCTT
T ss_pred -c-----CC-HHHHHHHHHHHHHCCCcEEE--EcCCHHHHHHHHHCCCCEEEECCCccc
Confidence 0 11 22345556667777888888 789999999999999999999865543
No 237
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.69 E-value=0.00031 Score=65.84 Aligned_cols=123 Identities=22% Similarity=0.237 Sum_probs=83.1
Q ss_pred HHHHHHHHHHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCC--CceEEEc-ccCCHH----HHHHHHHcCCCEEEE
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYP--ELDVIGG-NVVTMY----QAQNLIEAGVDGLRV 316 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~--~~~Vi~g-~V~t~e----~a~~l~~aGad~I~v 316 (505)
....++.+++.|+|.+.+...- |+...+.+.+..+++... .+++|.- ...+.+ .++.+.++|+|+|+.
T Consensus 73 k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKT 152 (220)
T 1ub3_A 73 KALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKT 152 (220)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 3456778889999999876643 345667888888888763 3565552 223544 346677899999988
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCC--EEEeccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGAS--TVMMGSF 382 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~--~V~~G~~ 382 (505)
+.|-+. +..++..+...++.. ..++||-++|||++..|+.+.+.+||+ ++..|..
T Consensus 153 sTGf~~----------~gat~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~ 209 (220)
T 1ub3_A 153 STGFGP----------RGASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVA 209 (220)
T ss_dssp CCSSSS----------CCCCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHH
T ss_pred CCCCCC----------CCCCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHH
Confidence 743110 112444444444444 356999999999999999999999999 4444443
No 238
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.69 E-value=0.00018 Score=70.66 Aligned_cols=66 Identities=18% Similarity=0.096 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCccEEEEeC--------CCCC-chhHHHHHHHHHHhCCCceEEEccc-CCHHHHHHHHHcCCCEEEE
Q 010640 250 KERLEHLVKAGVNVVVLDS--------SQGN-SSFQIEMIKYAKKTYPELDVIGGNV-VTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~--------~~g~-~~~~~~~i~~l~~~~~~~~Vi~g~V-~t~e~a~~l~~aGad~I~v 316 (505)
.+.++.+.++|+.++..-. ..|. .....+.++.+++.. ++||+.+.- +..++++.+..+|+|+|+.
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av-~iPV~~K~rig~~~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAV-SIPVMAKCRIGHTTEALVLEAIGVDMIDE 102 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHC-SSCEEEEEETTCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhc-CCCeEEEEeecchHHHHHHHHcCCCEEeh
Confidence 5678888889999984421 1221 122457778888887 899998744 4578888888899999875
No 239
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.68 E-value=2.9e-05 Score=70.27 Aligned_cols=60 Identities=12% Similarity=0.170 Sum_probs=52.4
Q ss_pred ccccccccccCCC--ceEe--cCCCCHHHHHHHHHHCCCCeeEEe--eC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSS--NVSV--PANYDLGQIDEVLEKNDVDFVVLE--KD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~--~~~v--~~~~~l~~a~~~l~~~~i~~lpVv--d~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++..+ ++++ .+++++.+|+++|.+++++.+||+ |+ |+++|+||..|+++...
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~ 76 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIE 76 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHH
Confidence 4578999998211 7888 999999999999999999999999 67 99999999999988753
No 240
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.67 E-value=0.0011 Score=63.34 Aligned_cols=161 Identities=12% Similarity=0.156 Sum_probs=98.6
Q ss_pred EecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHH
Q 010640 178 SVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLV 257 (505)
Q Consensus 178 ~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li 257 (505)
.+..+.++.++++++.+.+.. +|++ +.|..+.+... -....++.+.
T Consensus 68 AL~~g~~~~~~~~~~~~~r~~-~Piv-------lm~Y~N~i~~~--------------------------G~e~F~~~~~ 113 (252)
T 3tha_A 68 ALDQGVDIHSVFELLARIKTK-KALV-------FMVYYNLIFSY--------------------------GLEKFVKKAK 113 (252)
T ss_dssp HHHTTCCHHHHHHHHHHCCCS-SEEE-------EECCHHHHHHH--------------------------CHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHhcC-CCEE-------EEeccCHHHHh--------------------------hHHHHHHHHH
Confidence 345678899999999987654 6664 34444433321 1446788899
Q ss_pred HcCccEEEE-eCCCCCchhHHHHHHHHHHhCCCceE--EEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCc
Q 010640 258 KAGVNVVVL-DSSQGNSSFQIEMIKYAKKTYPELDV--IGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGR 334 (505)
Q Consensus 258 eaGad~I~i-~~~~g~~~~~~~~i~~l~~~~~~~~V--i~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~ 334 (505)
++|+|.+.+ |.+. +...++.+..++. ++.. ++....+.+..+.+.+.+-.++..-...| .+|...
T Consensus 114 ~aGvdG~IipDLP~---eE~~~~~~~~~~~--Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~G-------vTG~~~ 181 (252)
T 3tha_A 114 SLGICALIVPELSF---EESDDLIKECERY--NIALITLVSVTTPKERVKKLVKHAKGFIYLLASIG-------ITGTKS 181 (252)
T ss_dssp HTTEEEEECTTCCG---GGCHHHHHHHHHT--TCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSC-------SSSCSH
T ss_pred HcCCCEEEeCCCCH---HHHHHHHHHHHHc--CCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCC-------CCCccc
Confidence 999999877 3322 2233444444454 4322 23345568888888888777765421111 111111
Q ss_pred ChHHHHHH-HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 335 GQATAVYK-VSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 335 p~~~~l~~-v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
+....+.+ +.+..+..++|++..+||.+++++.++.. +||+|.+||+|..
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 11111222 23333345799999999999999988766 6999999999864
No 241
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.65 E-value=0.0002 Score=66.53 Aligned_cols=96 Identities=10% Similarity=0.077 Sum_probs=68.6
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHC---CCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccC-CCCc
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKN---DVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVG-PDGK 236 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~---~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d-~~~~ 236 (505)
.+..++++|++ ++++++++.++.++++.|.+. ++..+||+|+ |+++|+||.+|++....... ..+ ....
T Consensus 52 ~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~----v~~im~~~ 125 (205)
T 3kxr_A 52 SENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHEPHEP----LISLLSED 125 (205)
T ss_dssp CTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSCTTSB----GGGGCCSS
T ss_pred CcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCCCcch----HHHHhcCC
Confidence 45679999999 999999999999999999997 8899999998 99999999999987532111 111 1111
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVL 266 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i 266 (505)
. + .+.......+.++.+.+.+...+.|
T Consensus 126 ~-~--~v~~~~~l~~a~~~m~~~~~~~lpV 152 (205)
T 3kxr_A 126 S-R--ALTANTTLLDAAEAIEHSREIELPV 152 (205)
T ss_dssp C-C--CEETTSCHHHHHHHHHTSSCSEEEE
T ss_pred C-e--EECCCCCHHHHHHHHHhcCCCEEEE
Confidence 1 1 1112234556667777777766644
No 242
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.64 E-value=0.00011 Score=69.69 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=82.6
Q ss_pred HHHHHHHHcCccEEEEeCC--CCCchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEc-cCCcceeec
Q 010640 251 ERLEHLVKAGVNVVVLDSS--QGNSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVG-MGSGSICTT 326 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~--~g~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~-~g~g~~~~~ 326 (505)
+.++.+.++|+|.++++.. .. ....+.++.+++. +..+++- +..|+.+.......++|+|.+. ..+|...
T Consensus 76 ~~i~~~~~aGadgv~vh~e~~~~--~~~~~~~~~i~~~--g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~gg-- 149 (230)
T 1tqj_A 76 KYVEDFAKAGADIISVHVEHNAS--PHLHRTLCQIREL--GKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGG-- 149 (230)
T ss_dssp GTHHHHHHHTCSEEEEECSTTTC--TTHHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC------
T ss_pred HHHHHHHHcCCCEEEECcccccc--hhHHHHHHHHHHc--CCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCC--
Confidence 4567888999999999875 33 2455677777765 5555441 3345555555555689988663 3333211
Q ss_pred ccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
. .+....+.-+.++++...+ .++||.++|||.. ..+.++..+|||++.+||.+..
T Consensus 150 q---~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 150 Q---SFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp C---CCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred c---cCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 1 1222245556666655532 2699999999997 8899999999999999999764
No 243
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.63 E-value=0.00053 Score=66.25 Aligned_cols=118 Identities=19% Similarity=0.243 Sum_probs=79.8
Q ss_pred HHHHHHHHcCccEEEEeC--CCCCchhHHHHHHHHHHhCC--CceEEEcccC---------CHHH----HHHHHHcCCCE
Q 010640 251 ERLEHLVKAGVNVVVLDS--SQGNSSFQIEMIKYAKKTYP--ELDVIGGNVV---------TMYQ----AQNLIEAGVDG 313 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~--~~g~~~~~~~~i~~l~~~~~--~~~Vi~g~V~---------t~e~----a~~l~~aGad~ 313 (505)
..++.+++.|++.+.+.. ..+....+.+.++.+++... ++|+|+-... +.+. ++.+.++|+|+
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~ 175 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADA 175 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCE
Confidence 456778899999997765 33333455666666654321 6777663222 3332 46678899999
Q ss_pred EEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCC-cEEecCCCC--CHHHHHHHH----HhCCCEEEecccccCC
Q 010640 314 LRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGV-PVIADGGIS--NSGHIVKAL----VLGASTVMMGSFLAGS 386 (505)
Q Consensus 314 I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~i-pvIa~GGI~--~~~di~kal----~lGA~~V~~G~~f~~~ 386 (505)
|.++.. ..++.+.++++.+ +. ||+++|||. +..+..+.+ .+||+++.+|+.+..+
T Consensus 176 vkt~~~---------------~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 176 MKIKYT---------------GDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp EEEECC---------------SSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred EEEcCC---------------CCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 987620 1345555555443 45 999999999 888777666 8999999999987654
No 244
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.62 E-value=0.00021 Score=67.59 Aligned_cols=128 Identities=20% Similarity=0.225 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCccEEEEeCC--CCCchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEE-ccCCccee
Q 010640 249 DKERLEHLVKAGVNVVVLDSS--QGNSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRV-GMGSGSIC 324 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~--~g~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v-~~g~g~~~ 324 (505)
..+.++.+.++|+|.+.+|.. .+ ....+.++.+++. +..+++. ...|..+.......++|++.+ +.++|..
T Consensus 80 ~~~~v~~~~~~Gad~v~vh~~~~~~--~~~~~~~~~~~~~--g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~- 154 (230)
T 1rpx_A 80 PDQRVPDFIKAGADIVSVHCEQSST--IHLHRTINQIKSL--GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFG- 154 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEECSTTTC--SCHHHHHHHHHHT--TSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCS-
T ss_pred HHHHHHHHHHcCCCEEEEEecCccc--hhHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCC-
Confidence 446788888999999999876 43 2345666666665 5555442 113433333344578998854 3333211
Q ss_pred ecccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
+..+ .| ..+.-+..+++.... .++|++++|||. +..+.+++.+||++|.+|+.+..+
T Consensus 155 -g~~~-~~--~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a 213 (230)
T 1rpx_A 155 -GQSF-IE--SQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 213 (230)
T ss_dssp -SCCC-CT--THHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred -Cccc-cH--HHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCC
Confidence 1111 11 233444455544421 268999999998 788989999999999999998643
No 245
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.60 E-value=4.4e-05 Score=67.23 Aligned_cols=59 Identities=10% Similarity=0.111 Sum_probs=51.6
Q ss_pred cccccccccC----CCceEecCCCCHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhc
Q 010640 164 VKIFDYMRDC----SSNVSVPANYDLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKG 222 (505)
Q Consensus 164 ~~v~~im~~~----~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~ 222 (505)
.+++++|++. .+++++.+++++.+|++.|.+++...+||+|+|+++|+||..|+++...
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~ 69 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVV 69 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSG
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHH
Confidence 3688999852 2679999999999999999999999999965599999999999998753
No 246
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.60 E-value=0.00026 Score=65.98 Aligned_cols=81 Identities=14% Similarity=0.039 Sum_probs=50.7
Q ss_pred cCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCc-ChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhC
Q 010640 297 VVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGR-GQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLG 373 (505)
Q Consensus 297 V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~-p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lG 373 (505)
+.|.+++..+. .|+|++.++. +..+....+.+. -.+..+.. .+.. .++||++.|||. +.++..++.+|
T Consensus 95 ~~t~~e~~~A~-~GaDyv~~g~----vf~t~sk~~~~~~~g~~~l~~---~~~~~~~~iPviaiGGI~-~~nv~~~~~~G 165 (210)
T 3ceu_A 95 CHSVEEVKNRK-HFYDYVFMSP----IYDSISKVNYYSTYTAEELRE---AQKAKIIDSKVMALGGIN-EDNLLEIKDFG 165 (210)
T ss_dssp ECSHHHHHTTG-GGSSEEEECC----CC---------CCCCHHHHHH---HHHTTCSSTTEEEESSCC-TTTHHHHHHTT
T ss_pred cCCHHHHHHHh-hCCCEEEECC----cCCCCCCCCCCCCCCHHHHHH---HHHhcCCCCCEEEECCCC-HHHHHHHHHhC
Confidence 44677777766 7888876641 111111111110 11233333 3333 469999999998 89999999999
Q ss_pred CCEEEecccccCC
Q 010640 374 ASTVMMGSFLAGS 386 (505)
Q Consensus 374 A~~V~~G~~f~~~ 386 (505)
|++|.+++.+...
T Consensus 166 a~gVav~s~i~~~ 178 (210)
T 3ceu_A 166 FGGAVVLGDLWNK 178 (210)
T ss_dssp CSEEEESHHHHTT
T ss_pred CCEEEEhHHhHcC
Confidence 9999999998654
No 247
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.58 E-value=0.00013 Score=80.35 Aligned_cols=135 Identities=17% Similarity=0.176 Sum_probs=87.3
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------c-------hhHHHHHHHHHHhCC-CceEEEcc-----
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------S-------SFQIEMIKYAKKTYP-ELDVIGGN----- 296 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------~-------~~~~~~i~~l~~~~~-~~~Vi~g~----- 296 (505)
++.+.+..+.++|.|.|.||.++|+ . +...+.++.+++.++ +.||.++-
T Consensus 157 ~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~ 236 (690)
T 3k30_A 157 WHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEE 236 (690)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcccc
Confidence 3556677788899999999988776 0 135678888888763 56776631
Q ss_pred ---cCCHH----HHHHHHHcCCCEEEEccCCcce-eecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 297 ---VVTMY----QAQNLIEAGVDGLRVGMGSGSI-CTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 297 ---V~t~e----~a~~l~~aGad~I~v~~g~g~~-~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
-.+.+ .++.+.+ |+|++.++.+.-.. .........+. ... .+.+..+..++|||+.|||.++.++.+
T Consensus 237 ~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~-~~~---~~~~i~~~~~~pvi~~G~i~~~~~a~~ 311 (690)
T 3k30_A 237 IDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGR-QEE---FVAGLKKLTTKPVVGVGRFTSPDAMVR 311 (690)
T ss_dssp STTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTT-THH---HHTTSGGGCSSCEEECSCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccc-cHH---HHHHHHHHcCCeEEEeCCCCCHHHHHH
Confidence 01233 3455555 89999887432100 00000111110 111 222333446799999999999999999
Q ss_pred HHHhC-CCEEEecccccCCC
Q 010640 369 ALVLG-ASTVMMGSFLAGST 387 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~~ 387 (505)
++..| ||+|++|++|+.-.
T Consensus 312 ~l~~g~~d~v~~gR~~~~~P 331 (690)
T 3k30_A 312 QIKAGILDLIGAARPSIADP 331 (690)
T ss_dssp HHHTTSCSEEEESHHHHHCT
T ss_pred HHHCCCcceEEEcHHhHhCc
Confidence 99998 99999999987543
No 248
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.56 E-value=0.00029 Score=66.18 Aligned_cols=125 Identities=21% Similarity=0.207 Sum_probs=75.0
Q ss_pred HHHHHHcCccEEEEeCCC-CCc-hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeec---c
Q 010640 253 LEHLVKAGVNVVVLDSSQ-GNS-SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT---Q 327 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~-g~~-~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~---~ 327 (505)
++.+.+.|+|.+.+..+. -.+ ....+.++..++. ++.+++ .+.+.++...+.+.|.++|-+...- .+.++ +
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~--Gl~~iv-~v~~~~e~~~~~~~~~~~i~~~~~~-~iGtG~~~~ 150 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNL--GLETIV-CTNNINTSKAVAALSPDCIAVEPPE-LIGTGIPVS 150 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHH--TCEEEE-EESSSHHHHHHTTTCCSEEEECCCC----------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHC--CCeEEE-EeCCchHHHHHHhCCCCEEEEEecc-ccccCCCCc
Confidence 466788999999883321 111 2344555555555 666655 4565566677777888877553100 00001 0
Q ss_pred cccccCcChHH-HHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 328 EVCAVGRGQAT-AVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 328 ~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
... ...+. ....+++.. .++||++.|||.++.++..+...|||+|.+|+.++.+
T Consensus 151 t~~---~~~~~~~~~~ir~~~--~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 151 KAN---PEVVEGTVRAVKEIN--KDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp --------CSHHHHHHHHHHC--TTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred cCC---HHHHHHHHHHHHhcc--CCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 000 00012 222222221 1689999999999999999999999999999998754
No 249
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.00045 Score=66.59 Aligned_cols=173 Identities=15% Similarity=0.072 Sum_probs=100.3
Q ss_pred CCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCc
Q 010640 183 YDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGV 261 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGa 261 (505)
.+..+.++.+.+.+.+.+-++|= + . -.++++.... .....+.++..+. . . .++.++ +|+
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~-----~-n~~~i~~i~~--------~~~~pv~vgGGir-~--~--~~~~~l-~Ga 97 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP-----N-NDDAAREALQ--------ESPQFLQVGGGIN-D--T--NCLEWL-KWA 97 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS-----S-CHHHHHHHHH--------HSTTTSEEESSCC-T--T--THHHHT-TTC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC-----C-CHHHHHHHHh--------cCCceEEEeCCCC-H--H--HHHHHh-cCC
Confidence 45667778888889999988873 3 1 2233333211 1122355666663 2 2 555666 999
Q ss_pred cEEEEeCC-CCC-chhHHHHHHHHHHhCC-C-ceEEE--c-------cc-----------CCH-HHHHHHHHcCCCEEEE
Q 010640 262 NVVVLDSS-QGN-SSFQIEMIKYAKKTYP-E-LDVIG--G-------NV-----------VTM-YQAQNLIEAGVDGLRV 316 (505)
Q Consensus 262 d~I~i~~~-~g~-~~~~~~~i~~l~~~~~-~-~~Vi~--g-------~V-----------~t~-e~a~~l~~aGad~I~v 316 (505)
+.+.+.+. ..+ ...-.+.++.+.+.+. . +.+.+ + .| .-. +.++.+.++ ++.+.+
T Consensus 98 ~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~ 176 (260)
T 2agk_A 98 SKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLI 176 (260)
T ss_dssp SCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEE
T ss_pred CEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEE
Confidence 99988664 122 0000234444444432 1 11111 1 11 113 788888889 998866
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHh-hcCCcEEecCCCCCHHHHHHHHHh--CCCEEEecccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAA-QSGVPVIADGGISNSGHIVKALVL--GASTVMMGSFL 383 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~-~~~ipvIa~GGI~~~~di~kal~l--GA~~V~~G~~f 383 (505)
- ..++.-...| |.++.+..+.+.+. ..++|||++|||.+..|+.+++.+ ||++|++|+.|
T Consensus 177 t------~i~~dG~~~G-~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 177 H------AADVEGLCGG-IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp E------C-------CC-CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred E------eeccccCcCC-CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 1 1111111112 45666666554321 006999999999999999999998 99999999986
No 250
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.54 E-value=8.8e-05 Score=71.01 Aligned_cols=78 Identities=15% Similarity=0.233 Sum_probs=56.6
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
..+.++.+.++|++.|.+..-. ....+.+ +....+ .+.++..++||++.|||+++.|+.+++..|||+|.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~------~~~~~~~-~~~~~i---~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ 106 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSID------RDGTKSG-YDTEMI---RFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVS 106 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETT------TTTCSSC-CCHHHH---HHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEC
T ss_pred HHHHHHHHHHcCCCEEEEEecC------cccCCCc-ccHHHH---HHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeee
Confidence 4678888999999999764110 0001111 233333 44555678999999999999999999999999999
Q ss_pred ecccccCC
Q 010640 379 MGSFLAGS 386 (505)
Q Consensus 379 ~G~~f~~~ 386 (505)
+|+.++..
T Consensus 107 ig~~~l~d 114 (247)
T 3tdn_A 107 INTAAVEN 114 (247)
T ss_dssp CSHHHHHC
T ss_pred hhhHHhhC
Confidence 99987643
No 251
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.51 E-value=0.00063 Score=65.25 Aligned_cols=129 Identities=22% Similarity=0.187 Sum_probs=81.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCC---------------CCCc-hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCC
Q 010640 248 SDKERLEHLVKAGVNVVVLDSS---------------QGNS-SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGV 311 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~---------------~g~~-~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGa 311 (505)
.....++.+.+.|+..+ ++.+ ++.. ....+.++..++. ++.-++ -+.+.++++.+.++|+
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~--gL~Ti~-~v~~~eeA~amA~agp 184 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL--DLLTTP-YVFSPEDAVAMAKAGA 184 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT--TCEECC-EECSHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC--CCeEEE-ecCCHHHHHHHHHcCC
Confidence 35566788899999988 6543 1211 2345555555555 554433 5789999999999999
Q ss_pred CEEEEccCCcceeecccccccCc--Ch---HHHHHHHHHHHhhc--CCcEEecC-CCCCHHHHHHHHHh--CCCEEEecc
Q 010640 312 DGLRVGMGSGSICTTQEVCAVGR--GQ---ATAVYKVSSIAAQS--GVPVIADG-GISNSGHIVKALVL--GASTVMMGS 381 (505)
Q Consensus 312 d~I~v~~g~g~~~~~~~~~g~g~--p~---~~~l~~v~~~~~~~--~ipvIa~G-GI~~~~di~kal~l--GA~~V~~G~ 381 (505)
|+|.+-.+- ++....|.+. .. .+.+.++.+++++. ++.|+..| ||.++.|+..++.+ |++++..++
T Consensus 185 DiI~~h~gl----T~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gAS 260 (286)
T 2p10_A 185 DILVCHMGL----TTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGAS 260 (286)
T ss_dssp SEEEEECSC----C---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESH
T ss_pred CEEEECCCC----CCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeeh
Confidence 999874321 1111222221 11 33444455555444 45566554 99999999999999 999999998
Q ss_pred ccc
Q 010640 382 FLA 384 (505)
Q Consensus 382 ~f~ 384 (505)
.+.
T Consensus 261 sie 263 (286)
T 2p10_A 261 SME 263 (286)
T ss_dssp HHH
T ss_pred hhh
Confidence 763
No 252
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.48 E-value=0.0001 Score=64.51 Aligned_cols=56 Identities=16% Similarity=0.199 Sum_probs=49.9
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEEeeC-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVLEKD-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpVvd~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++ + +++++.+++++.++++.|.++++..+||+|+ |+++|+||..|+++...
T Consensus 22 ~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~ 78 (152)
T 2uv4_A 22 ELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAA 78 (152)
T ss_dssp HHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhc
Confidence 3456666 4 8899999999999999999999999999998 99999999999998754
No 253
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.47 E-value=0.001 Score=65.12 Aligned_cols=115 Identities=17% Similarity=0.143 Sum_probs=76.0
Q ss_pred HHHHHHHcCccEEEEeCCCCC--chhHHHHHHHHHHhC--CCceEEEccc------CCHH----HHHHHHHcCCCEEEEc
Q 010640 252 RLEHLVKAGVNVVVLDSSQGN--SSFQIEMIKYAKKTY--PELDVIGGNV------VTMY----QAQNLIEAGVDGLRVG 317 (505)
Q Consensus 252 ~~~~lieaGad~I~i~~~~g~--~~~~~~~i~~l~~~~--~~~~Vi~g~V------~t~e----~a~~l~~aGad~I~v~ 317 (505)
.++.+++.|++.+.++...|. ....++.+..+++.. .++|+|+-.. .+.+ .++.+.++|+|+|.++
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 466788999999988766542 234555555555432 2678877211 1323 5677889999999875
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHH-----HHHHHHHhCCCEEEecccccCC
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSG-----HIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~-----di~kal~lGA~~V~~G~~f~~~ 386 (505)
. + + ..+.++ +....+||+++||+.... .+..|+.+||+++.+|+.+..+
T Consensus 210 ~-------t----~------e~~~~v---v~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 210 Y-------V----E------KGFERI---VAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp C-------C----T------TTHHHH---HHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred C-------C----H------HHHHHH---HHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 1 1 0 112333 333569999999999543 5667889999999999987654
No 254
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.44 E-value=8.2e-05 Score=79.34 Aligned_cols=58 Identities=19% Similarity=0.204 Sum_probs=53.8
Q ss_pred ccccccccccCCCceEecCC-CCHHHHHHHHHHCCCCeeEEee-C-CeeeeEEeechhhhhhc
Q 010640 163 KVKIFDYMRDCSSNVSVPAN-YDLGQIDEVLEKNDVDFVVLEK-D-GERLDVVTREDVERLKG 222 (505)
Q Consensus 163 ~~~v~~im~~~~~~~~v~~~-~~l~~a~~~l~~~~i~~lpVvd-~-g~l~GiIt~~dil~~~~ 222 (505)
..++.++|++ +++++.++ +++.+++++|.++++..+||+| + ++++|+||..||++...
T Consensus 383 ~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~ 443 (527)
T 3pc3_A 383 SLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIV 443 (527)
T ss_dssp TSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHH
T ss_pred CCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHH
Confidence 4689999998 99999999 9999999999999999999999 6 99999999999997653
No 255
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.42 E-value=0.0003 Score=67.28 Aligned_cols=77 Identities=25% Similarity=0.223 Sum_probs=56.7
Q ss_pred HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
.+.++.+.++|+|+|.+.-. ...+.+....+..+.+.++..++|++..|||.+..++.+++.+|||+|.+
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~----------~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDI----------SATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEEC----------CSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEEcC----------CccccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 46678888999999866410 00111222333445566666789999999999999999999999999999
Q ss_pred cccccCC
Q 010640 380 GSFLAGS 386 (505)
Q Consensus 380 G~~f~~~ 386 (505)
|+.++..
T Consensus 104 g~~~l~~ 110 (252)
T 1ka9_F 104 NSAAVRR 110 (252)
T ss_dssp CHHHHHC
T ss_pred ChHHHhC
Confidence 9987653
No 256
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.40 E-value=0.002 Score=60.78 Aligned_cols=131 Identities=18% Similarity=0.170 Sum_probs=80.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-hhHHHHHHHHHHhCCCceEEE--cc--cC---------------------CHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-SFQIEMIKYAKKTYPELDVIG--GN--VV---------------------TMY 301 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-~~~~~~i~~l~~~~~~~~Vi~--g~--V~---------------------t~e 301 (505)
...+.++.+.++|+|+|++..+.|.. ..+.+.++.+|+ . ++|++. .. .. ...
T Consensus 21 ~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~-~-~~Pivl~~y~~n~i~~gvDg~iipdLp~ee~~~~~~g~ 98 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ-Y-GLPIVVEPSDPSNVVYDVDYLFVPTVLNSADGDWITGK 98 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT-S-CCCEEECCSSCCCCCCCSSEEEEEEETTBSBGGGTTHH
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC-C-CCCEEEecCCcchhhcCCCEEEEcccCCCCCHHHHhhh
Confidence 45677889999999999998877755 568888888887 3 677655 11 00 111
Q ss_pred HHHHH-------HHcC-----CCEEE----EccCCcc--------eee------------------ccc-ccccCc-ChH
Q 010640 302 QAQNL-------IEAG-----VDGLR----VGMGSGS--------ICT------------------TQE-VCAVGR-GQA 337 (505)
Q Consensus 302 ~a~~l-------~~aG-----ad~I~----v~~g~g~--------~~~------------------~~~-~~g~g~-p~~ 337 (505)
....+ .+.| .+.|- +-...+. ... ... ..+.|. +..
T Consensus 99 ~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl~~~G~~~~~ 178 (234)
T 2f6u_A 99 HAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIEYSGTYGNP 178 (234)
T ss_dssp HHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTSCCCH
T ss_pred HHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEEeCCCCcchH
Confidence 11222 3345 55544 2111110 000 000 011122 233
Q ss_pred HHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 338 TAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 338 ~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
+.+..++ +.. ++|++..|||++++++.+++. |||+|.+||++.
T Consensus 179 ~~i~~i~---~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v 222 (234)
T 2f6u_A 179 ELVAEVK---KVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIY 222 (234)
T ss_dssp HHHHHHH---HHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHH
T ss_pred HHHHHHH---HhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHH
Confidence 3444443 345 799999999999999999999 999999999985
No 257
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.39 E-value=0.0042 Score=59.19 Aligned_cols=121 Identities=19% Similarity=0.163 Sum_probs=80.8
Q ss_pred HHHHHHHHHHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCCCce--EEEc-ccCCHH----HHHHHHHcCCCEEEE
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYPELD--VIGG-NVVTMY----QAQNLIEAGVDGLRV 316 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~~~~--Vi~g-~V~t~e----~a~~l~~aGad~I~v 316 (505)
-...++.+++.|+|-|.+...- |+...+.+.++.+++...+.+ +|.= ...+.+ .++.+.++|+|+|+.
T Consensus 113 Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 192 (260)
T 3r12_A 113 KAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKT 192 (260)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEc
Confidence 3445677888999999776543 444667788888888765443 3431 223443 345567899999988
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
+.|-+. +..++..+...++... .+++|-++|||++..|+.+.+.+||+-++..
T Consensus 193 STGf~~----------~GAT~edV~lm~~~vg-~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 193 STGFGT----------GGATAEDVHLMKWIVG-DEMGVKASGGIRTFEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp CCSSSS----------CCCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCCCC----------CCCCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCceeecc
Confidence 743110 1234444444444443 4699999999999999999999999955443
No 258
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.37 E-value=0.00014 Score=71.20 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=52.8
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHC-----CCCeeEEeeC-CeeeeEEeechhhhh
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKN-----DVDFVVLEKD-GERLDVVTREDVERL 220 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~-----~i~~lpVvd~-g~l~GiIt~~dil~~ 220 (505)
.+.+++++|++ ++++++++.++.++++.|.++ ++..+||+|+ |+++|+||.+|++..
T Consensus 135 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 135 EDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN 197 (286)
T ss_dssp CTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS
T ss_pred ChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC
Confidence 46789999998 999999999999999999997 7888999998 999999999999875
No 259
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.37 E-value=0.00025 Score=77.31 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=55.8
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHH-HCCCCeeEEeeC-CeeeeEEeechhhhhhcC
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLE-KNDVDFVVLEKD-GERLDVVTREDVERLKGY 223 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~-~~~i~~lpVvd~-g~l~GiIt~~dil~~~~~ 223 (505)
.+.+++++|+++.+++++++++++.++.+.|. +++.+.+||+|+ ++++|+||++|+++....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~ 514 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQH 514 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTT
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHH
Confidence 45689999995449999999999999999999 799999999998 999999999999987643
No 260
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.37 E-value=0.0015 Score=69.31 Aligned_cols=86 Identities=17% Similarity=0.156 Sum_probs=59.3
Q ss_pred ccCCHHHHHHHHHcC---CCEEEEccCCcceeecccccccC--cChHHHHHHHHHHHhh---cCCcEEecCCCCCHHHHH
Q 010640 296 NVVTMYQAQNLIEAG---VDGLRVGMGSGSICTTQEVCAVG--RGQATAVYKVSSIAAQ---SGVPVIADGGISNSGHIV 367 (505)
Q Consensus 296 ~V~t~e~a~~l~~aG---ad~I~v~~g~g~~~~~~~~~g~g--~p~~~~l~~v~~~~~~---~~ipvIa~GGI~~~~di~ 367 (505)
.+.+.++++.+.+.| +|+|-++ .+..+....+.. ...+..+.++.+.++. .++|+++.||| +..++.
T Consensus 114 S~ht~eea~~A~~~G~~~aDYv~~G----pvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~ 188 (540)
T 3nl6_A 114 SVGFPEEVDELSKMGPDMVDYIGVG----TLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIE 188 (540)
T ss_dssp EECSHHHHHHHHHTCC--CCEEEES----CCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHH
T ss_pred ECCCHHHHHHHHHcCCCCCCEEEEc----CCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHH
Confidence 566899999999999 9999775 122221111111 1124455555554422 36999999999 889999
Q ss_pred HHHH--------hCCCEEEecccccCC
Q 010640 368 KALV--------LGASTVMMGSFLAGS 386 (505)
Q Consensus 368 kal~--------lGA~~V~~G~~f~~~ 386 (505)
+.+. +||++|.+++.+..+
T Consensus 189 ~v~~~~~~~g~~~GadgvAVvsaI~~a 215 (540)
T 3nl6_A 189 RVLYQCVSSNGKRSLDGICVVSDIIAS 215 (540)
T ss_dssp HHHHHCBCTTSSCBCSCEEESHHHHTC
T ss_pred HHHHhhcccccccCceEEEEeHHHhcC
Confidence 9998 899999999998754
No 261
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.36 E-value=0.00089 Score=63.17 Aligned_cols=123 Identities=22% Similarity=0.173 Sum_probs=78.8
Q ss_pred HHHHHHHHcCccEEEEeCCCCCchhH-HHHHHHHHHhCCCceEEEc-ccCCH-HHHHHHHHc--CCCEEEEc-cCCccee
Q 010640 251 ERLEHLVKAGVNVVVLDSSQGNSSFQ-IEMIKYAKKTYPELDVIGG-NVVTM-YQAQNLIEA--GVDGLRVG-MGSGSIC 324 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~g~~~~~-~~~i~~l~~~~~~~~Vi~g-~V~t~-e~a~~l~~a--Gad~I~v~-~g~g~~~ 324 (505)
+.++.+.++|+|.+.+|..... .. .+.++.+++. ++.+++. +..|. +..+.+... ++|++.+. ..+|...
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~--~~~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g 153 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSR--DNWQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGG 153 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCT--TTHHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSS
T ss_pred HHHHHHHHcCCCEEEECCCCcc--cHHHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCc
Confidence 4577778899999999875432 23 5667777665 5655542 22333 344455555 99999874 3322111
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.. +....+.-+.++++... ++|++++|||.. ..+.+++.+|||.+.+|+.+..
T Consensus 154 --~~---~~~~~l~~i~~~~~~~~--~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~ 206 (228)
T 1h1y_A 154 --QK---FMPEMMEKVRALRKKYP--SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFG 206 (228)
T ss_dssp --CC---CCGGGHHHHHHHHHHCT--TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHT
T ss_pred --cc---CCHHHHHHHHHHHHhcC--CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 11 11123444545544331 689999999987 7888999999999999999764
No 262
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.36 E-value=0.0025 Score=60.42 Aligned_cols=130 Identities=18% Similarity=0.260 Sum_probs=81.3
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCc-hhHHHHHHHHHHhCCCceEEE--cc---cC---------------C-----H
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNS-SFQIEMIKYAKKTYPELDVIG--GN---VV---------------T-----M 300 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~-~~~~~~i~~l~~~~~~~~Vi~--g~---V~---------------t-----~ 300 (505)
+...+.++.+.++|+|++++..+.|.+ ....+.++.+|+ . ++|++. +. +. + .
T Consensus 20 ~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~-~-~~Pivlm~y~~n~i~~G~dg~iiPdLp~ee~~~~~~g 97 (240)
T 1viz_A 20 DLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-F-LVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVG 97 (240)
T ss_dssp CCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT-S-SSCEEEECSCGGGCCSCCSEEEEEEETTBSSGGGTTH
T ss_pred cccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC-c-CCCEEEecCccccccCCCCEEEEcccCcccChhhhcc
Confidence 345677889999999999998877765 448889999988 4 788874 11 10 1 1
Q ss_pred HHHHHHHHcC-----CCEEE----EccCCcc-----------------------------eeecccccccCc-ChHHHHH
Q 010640 301 YQAQNLIEAG-----VDGLR----VGMGSGS-----------------------------ICTTQEVCAVGR-GQATAVY 341 (505)
Q Consensus 301 e~a~~l~~aG-----ad~I~----v~~g~g~-----------------------------~~~~~~~~g~g~-p~~~~l~ 341 (505)
.+...+.+.| .+.|- +-...+. ..+. .+.|. +....+.
T Consensus 98 ~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl---~s~G~~~~~~~i~ 174 (240)
T 1viz_A 98 MHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYL---EYSGVLGDIEAVK 174 (240)
T ss_dssp HHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEE---ECTTSCCCHHHHH
T ss_pred hhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEE---eCCCccChHHHHH
Confidence 1234455566 56554 2110000 0000 11122 2333343
Q ss_pred HHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 342 KVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 342 ~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.+ .+.. ++|++..|||++++++.+++. |||+|.+||++..
T Consensus 175 ~i---~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~ 215 (240)
T 1viz_A 175 KT---KAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE 215 (240)
T ss_dssp HH---HHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH
T ss_pred HH---HHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 33 3445 799999999999999999988 9999999999863
No 263
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.34 E-value=0.0008 Score=65.38 Aligned_cols=98 Identities=11% Similarity=0.111 Sum_probs=69.3
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHC-----CCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCCCC
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKN-----DVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGPDG 235 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~-----~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~~~ 235 (505)
...++.++|++ ++++++++.++.++++.|.++ ++..+||+|+ |+++|+||.+|++....... ..+.-.
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~----v~~im~ 206 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTR----VAEIMN 206 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSCTTCB----STTTSB
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCCCCCc----HHHHhC
Confidence 45679999998 999999999999999999997 7899999998 99999999999997532110 111100
Q ss_pred cceEEEeecCCccHHHHHHHHHHcCccEEEEe
Q 010640 236 KWMVGAAIGTRESDKERLEHLVKAGVNVVVLD 267 (505)
Q Consensus 236 ~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~ 267 (505)
+-.+ .+.......+.++.+.+.+...+.|.
T Consensus 207 ~~~~--~v~~~~~l~~a~~~m~~~~~~~lpVv 236 (278)
T 2yvy_A 207 PKVV--YVRTDTDQEEVARLMADYDFTVLPVV 236 (278)
T ss_dssp SSCC--CEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred CCCe--EEeCCCCHHHHHHHHHhcCCCEEEEE
Confidence 0011 11123345667777777777666553
No 264
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.32 E-value=0.0031 Score=60.94 Aligned_cols=124 Identities=13% Similarity=0.120 Sum_probs=92.5
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEccc-CCHHHHHHHHHcCCCEEEEccCCccee
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNV-VTMYQAQNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V-~t~e~a~~l~~aGad~I~v~~g~g~~~ 324 (505)
..+..+.+..+.+.|++++.+-+..+...+..+.++.+++.. ++||+.+.. .+......+..+|||+|.+...
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a----- 151 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCILIIMA----- 151 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEEEETT-----
T ss_pred CCCHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEEEccc-----
Confidence 345778899999999999988655444434567778888876 899998864 5667788899999999976421
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
.+ + ...+.+..+.++..++.+++ =+.|..++.+|+.+||+.+++..+-+.+
T Consensus 152 ---~L-----~-~~~l~~l~~~a~~lGl~~lv--evh~~eEl~~A~~~ga~iIGinnr~l~t 202 (272)
T 3tsm_A 152 ---SV-----D-DDLAKELEDTAFALGMDALI--EVHDEAEMERALKLSSRLLGVNNRNLRS 202 (272)
T ss_dssp ---TS-----C-HHHHHHHHHHHHHTTCEEEE--EECSHHHHHHHTTSCCSEEEEECBCTTT
T ss_pred ---cc-----C-HHHHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHhcCCCEEEECCCCCcc
Confidence 11 1 23355556667777888887 6789999999999999999988665443
No 265
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.32 E-value=0.0032 Score=57.36 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=34.7
Q ss_pred HHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 346 IAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 346 ~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
.++..++|||+.|+|++.+|+.+|+.+||++|..|+..+
T Consensus 145 i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 145 MTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp HHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGG
T ss_pred HHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHH
Confidence 344568999999999999999999999999999998765
No 266
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.28 E-value=0.005 Score=57.80 Aligned_cols=121 Identities=20% Similarity=0.179 Sum_probs=81.8
Q ss_pred HHHHHHHHHHcCccEEEEeCCC-----CCchhHHHHHHHHHHhCCCce--EEEc-ccC----CHHH----HHHHHHcCCC
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ-----GNSSFQIEMIKYAKKTYPELD--VIGG-NVV----TMYQ----AQNLIEAGVD 312 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~-----g~~~~~~~~i~~l~~~~~~~~--Vi~g-~V~----t~e~----a~~l~~aGad 312 (505)
-...++.+++.|+|-|.+...- |+...+.+.++.+++...+.+ +|.= ... +.+. ++.+.++|+|
T Consensus 82 K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGAD 161 (231)
T 3ndo_A 82 KATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGAD 161 (231)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcC
Confidence 3446677889999999776543 455667888888888875443 3331 122 4443 3556679999
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
+|+.+.|-+ ..+..++..+...++... .+++|-++|||++..|..+.+.+||+-++.
T Consensus 162 fVKTSTGf~---------~~~gAt~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~RiGt 218 (231)
T 3ndo_A 162 FVKTSTGFH---------PSGGASVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATRLGL 218 (231)
T ss_dssp EEECCCSCC---------TTCSCCHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred EEEcCCCCC---------CCCCCCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchhccc
Confidence 998874311 011234555555555544 469999999999999999999999995443
No 267
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.25 E-value=0.006 Score=57.20 Aligned_cols=125 Identities=9% Similarity=-0.005 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCccEEEEeCC-----CCCchhHHHHHHHHHHhCCC--ceEEEc-ccCCHH----HHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSS-----QGNSSFQIEMIKYAKKTYPE--LDVIGG-NVVTMY----QAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~-----~g~~~~~~~~i~~l~~~~~~--~~Vi~g-~V~t~e----~a~~l~~aGad~I~v~ 317 (505)
...++. ++.|+|.|.+... .|+...+.+.++.+++..++ +++|+- ...+.+ .++.+.++|+|+|+.+
T Consensus 70 ~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTS 148 (226)
T 1vcv_A 70 IALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSS 148 (226)
T ss_dssp HHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 355667 8999999977653 34556678888888887643 455552 223544 3466778999999987
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHh---CCC
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVL---GAS 375 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~l---GA~ 375 (505)
.|-+...+.......+..++..+...++..+. .+++|-++|||++..|+.+.+.+ ||+
T Consensus 149 TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 149 TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred CCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 43220000000111122344444444444222 34999999999999999999999 988
No 268
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.18 E-value=0.00087 Score=64.05 Aligned_cols=76 Identities=20% Similarity=0.205 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
.+.++.+.++|+|.+.+....+ .+......+..+.+.++..++|++..|||.++.++.+++.+|||+|.+
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~----------~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITA----------SVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSC----------SSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEECCch----------hhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 4567888899999987642111 111111223334455556789999999999999999999999999999
Q ss_pred cccccC
Q 010640 380 GSFLAG 385 (505)
Q Consensus 380 G~~f~~ 385 (505)
|+..+.
T Consensus 103 g~~~l~ 108 (253)
T 1thf_D 103 NTAAVE 108 (253)
T ss_dssp SHHHHH
T ss_pred ChHHHh
Confidence 998764
No 269
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.17 E-value=0.0019 Score=60.63 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=33.1
Q ss_pred Hhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 347 AAQS-GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 347 ~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
++.. ++|++..|||++++++.+++ .|||+|.+||++..
T Consensus 175 ~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~ 213 (228)
T 3vzx_A 175 KAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE 213 (228)
T ss_dssp HHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH
T ss_pred HHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc
Confidence 3345 69999999999999999988 79999999999853
No 270
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.15 E-value=0.0025 Score=60.13 Aligned_cols=121 Identities=16% Similarity=0.129 Sum_probs=76.4
Q ss_pred HHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCCHHHHHHHHHcCCCEEEE-ccCCcceeecc
Q 010640 251 ERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVTMYQAQNLIEAGVDGLRV-GMGSGSICTTQ 327 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t~e~a~~l~~aGad~I~v-~~g~g~~~~~~ 327 (505)
..++.+.++|+|.+.+|..... .....++.+++. ++.+.+ ..-...+..+.+.. .+|.|.+ +..+|... .
T Consensus 78 ~~i~~~~~aGad~itvH~Ea~~--~~~~~i~~i~~~--G~k~gval~p~t~~e~l~~~l~-~~D~Vl~msv~pGf~G--q 150 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHLEATE--NPGALIKDIREN--GMKVGLAIKPGTSVEYLAPWAN-QIDMALVMTVEPGFGG--Q 150 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCS--CHHHHHHHHHHT--TCEEEEEECTTSCGGGTGGGGG-GCSEEEEESSCTTTCS--C
T ss_pred HHHHHHHHcCCCEEEEccCCch--hHHHHHHHHHHc--CCCEEEEEcCCCCHHHHHHHhc-cCCeEEEeeecCCCCC--c
Confidence 4567788999999999875432 356777888776 555433 22233444444433 4888765 33333211 1
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
. |....+.-+..+++.. .+.+|.++||| ++..+..+..+|||.+.+|+.+.
T Consensus 151 ~---f~~~~l~ki~~lr~~~--~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf 201 (228)
T 3ovp_A 151 K---FMEDMMPKVHWLRTQF--PSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIM 201 (228)
T ss_dssp C---CCGGGHHHHHHHHHHC--TTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHH
T ss_pred c---cCHHHHHHHHHHHHhc--CCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHh
Confidence 1 1112334444444432 24899999999 58999999999999999999864
No 271
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.15 E-value=0.0024 Score=62.46 Aligned_cols=89 Identities=11% Similarity=0.130 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
+.+.++..++.+|..++++ ++.+.++++.+.++|+|+|.+.+ .++..+.+..+... .+++|.
T Consensus 195 i~~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~----------------~~~e~l~~~v~~~~-~~~~I~ 256 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDN----------------FNTDQMREAVKRVN-GQARLE 256 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESS----------------CCHHHHHHHHHTTC-TTCCEE
T ss_pred HHHHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHHhC-CCCeEE
Confidence 4567778888876546666 78899999999999999997753 12344444444332 259999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
++||| +...+.+....|+|.+.+|+..
T Consensus 257 ASGGI-t~~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 257 VSGNV-TAETLREFAETGVDFISVGALT 283 (296)
T ss_dssp ECCCS-CHHHHHHHHHTTCSEEECSHHH
T ss_pred EECCC-CHHHHHHHHHcCCCEEEEeHHH
Confidence 99999 9999999999999999999854
No 272
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.12 E-value=0.0011 Score=64.41 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhCCC-ceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhh--cCC
Q 010640 276 QIEMIKYAKKTYPE-LDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGV 352 (505)
Q Consensus 276 ~~~~i~~l~~~~~~-~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~i 352 (505)
..+.++..++.+|. .++++ ++.+.++++.+.++|+|+|.+.+ ++ +..+..+.+..+. .++
T Consensus 168 ~~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~-------------~~---~~~l~~~v~~l~~~~~~~ 230 (273)
T 2b7n_A 168 LKSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDN-------------LS---VLETKEIAAYRDAHYPFV 230 (273)
T ss_dssp HHHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEET-------------CC---HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECC-------------CC---HHHHHHHHHHhhccCCCc
Confidence 35677777887754 46666 88899999999999999998753 11 2344444443332 138
Q ss_pred cEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 353 PVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 353 pvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
||.++||| +...+.+....|||.+.+|+.+.
T Consensus 231 ~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 231 LLEASGNI-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp EEEEESSC-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred EEEEECCC-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 99999999 99999999999999999999754
No 273
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.12 E-value=0.0043 Score=57.54 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=77.4
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCCHHHHHHHHHcCCCEEEEccCCccee
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVTMYQAQNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t~e~a~~l~~aGad~I~v~~g~g~~~ 324 (505)
++..+.++.+.+.|++.+.++.... ...+.++.+++.+ ++++++ |++.+.+.+..+.++|+|+|.++.
T Consensus 19 ~~~~~~~~~~~~~G~~~i~l~~~~~---~~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~------ 88 (212)
T 2v82_A 19 DEALAHVGAVIDAGFDAVEIPLNSP---QWEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARMGCQLIVTPN------ 88 (212)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTST---THHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHTTCCEEECSS------
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHcCCCEEEeCC------
Confidence 4466778888899999999866543 2346666676655 444444 677888999999999999995321
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
... ++.+.++..+.+++. |+.|+.++.++..+|||.|.+
T Consensus 89 ----------~~~----~~~~~~~~~g~~~~~--g~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 89 ----------IHS----EVIRRAVGYGMTVCP--GCATATEAFTALEAGAQALKI 127 (212)
T ss_dssp ----------CCH----HHHHHHHHTTCEEEC--EECSHHHHHHHHHTTCSEEEE
T ss_pred ----------CCH----HHHHHHHHcCCCEEe--ecCCHHHHHHHHHCCCCEEEE
Confidence 111 123444556778877 499999999999999999986
No 274
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.08 E-value=0.0022 Score=60.52 Aligned_cols=115 Identities=18% Similarity=0.098 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCc-hhHHHHHHHHHHhCC--CceE--EE-cccCCHH----HHHHHHHcCCCEEEEcc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNS-SFQIEMIKYAKKTYP--ELDV--IG-GNVVTMY----QAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~-~~~~~~i~~l~~~~~--~~~V--i~-g~V~t~e----~a~~l~~aGad~I~v~~ 318 (505)
....++.+++.|+|.+.+...-|.. ..+.+.+..+++... +.|+ |. -...+.+ .++.+.++|+|+|+.+.
T Consensus 90 k~~e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTsT 169 (234)
T 1n7k_A 90 KLVEAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGADIVKTST 169 (234)
T ss_dssp HHHHHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEEESCC
T ss_pred HHHHHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 4456778889999999887655432 245666666666432 3554 43 2223444 34667789999998874
Q ss_pred CCcceeecccccccCcChHHHHHH--HHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYK--VSSIAAQSGVPVIADGGISNSGHIVKALVLGAS 375 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~--v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~ 375 (505)
|-+ +.+..++..+.. .++. .++||-++|||++..|..+.+.+||+
T Consensus 170 G~~---------~~~gAt~~dv~l~~m~~~---v~v~VKaaGGirt~~~al~~i~aGa~ 216 (234)
T 1n7k_A 170 GVY---------TKGGDPVTVFRLASLAKP---LGMGVKASGGIRSGIDAVLAVGAGAD 216 (234)
T ss_dssp SSS---------CCCCSHHHHHHHHHHHGG---GTCEEEEESSCCSHHHHHHHHHTTCS
T ss_pred CCC---------CCCCCCHHHHHHHHHHHH---HCCCEEEecCCCCHHHHHHHHHcCcc
Confidence 311 001123333322 2222 23899999999999999999999999
No 275
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=97.08 E-value=0.0094 Score=55.88 Aligned_cols=123 Identities=24% Similarity=0.314 Sum_probs=78.4
Q ss_pred HHHHHHcCccEEEEeCCCC--CchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeeccccc
Q 010640 253 LEHLVKAGVNVVVLDSSQG--NSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVC 330 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g--~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~ 330 (505)
+..+.+.|++++.+.-+.- ........++...+. +..+++ .|.+.++...+...+.+.|-+- .+...
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~--GL~~iv-cVge~~e~~~~~~~~~~iIaye--------p~wai 146 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSL--GLDVVV-CAPDPRTSLAAAALGPHAVAVE--------PPELI 146 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTCCSEEEEC--------CGGGT
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHC--CCEEEE-EeCCHHHHHHHhcCCCCEEEEc--------Chhhh
Confidence 4567788999998743331 112233333333333 666666 6787777777888888755331 12334
Q ss_pred ccCc----ChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 331 AVGR----GQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 331 g~g~----p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
|.|+ .+.+-+.++.+..+. .+++++..|||.++.|+..+...|+|++.+|+.++.+
T Consensus 147 GtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 147 GTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp TTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred ccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC
Confidence 4442 222223333333332 2589999999999999999999999999999998753
No 276
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.06 E-value=0.004 Score=61.33 Aligned_cols=121 Identities=19% Similarity=0.215 Sum_probs=75.4
Q ss_pred HHHHHHHcCccEEEEeCCCCC---chhHHHHHHHHHHhC--CCceEEEc------ccC---C-----HHHHHHHHHcCCC
Q 010640 252 RLEHLVKAGVNVVVLDSSQGN---SSFQIEMIKYAKKTY--PELDVIGG------NVV---T-----MYQAQNLIEAGVD 312 (505)
Q Consensus 252 ~~~~lieaGad~I~i~~~~g~---~~~~~~~i~~l~~~~--~~~~Vi~g------~V~---t-----~e~a~~l~~aGad 312 (505)
.++.+++.|+|++.+....+. ....++.+..+.+.. .++|+++- .+. + .+.++.+.+.|+|
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred hHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 356678899999975442221 234455555555442 27777662 121 1 2236778889999
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHhh-cCCc-EEecCCCCCH----HHHHHHHHhCCCEEEeccccc
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ-SGVP-VIADGGISNS----GHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~-~~ip-vIa~GGI~~~----~di~kal~lGA~~V~~G~~f~ 384 (505)
++.+... ..+. +....+.++.+.... +++| |+.+||+ +. ..+..++.+||++|.+|+.+.
T Consensus 193 ~iKv~~~---------~~~~--g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~ 258 (304)
T 1to3_A 193 LYKVEMP---------LYGK--GARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVW 258 (304)
T ss_dssp EEEECCG---------GGGC--SCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHH
T ss_pred EEEeCCC---------cCCC--CCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHh
Confidence 9988521 0011 133444444443222 5799 9999999 55 348889999999999998764
No 277
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.05 E-value=0.0069 Score=58.01 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=89.9
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcc-cCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGN-VVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~-V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.+..+.++.+.+.|++++.+-...+...+..+.++.+++.+ ++||..|. +.+......+..+|||+|.++.
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~------- 136 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLIV------- 136 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEEH-------
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEECc-------
Confidence 34678899999999999988654444444567788888887 89998876 4577688889999999997752
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
..+ + ..+.++.+.++..++.++. -+.+..++.+|+.+|++.++++.+++.
T Consensus 137 -~~l-----~--~~l~~l~~~a~~lGl~~lv--ev~~~~E~~~a~~~gad~IGvn~~~l~ 186 (254)
T 1vc4_A 137 -ALL-----G--ELTGAYLEEARRLGLEALV--EVHTERELEIALEAGAEVLGINNRDLA 186 (254)
T ss_dssp -HHH-----G--GGHHHHHHHHHHHTCEEEE--EECSHHHHHHHHHHTCSEEEEESBCTT
T ss_pred -cch-----H--HHHHHHHHHHHHCCCeEEE--EECCHHHHHHHHHcCCCEEEEccccCc
Confidence 111 1 2234444445556777666 678999999999999999999988764
No 278
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.02 E-value=0.0035 Score=58.95 Aligned_cols=131 Identities=14% Similarity=0.235 Sum_probs=78.8
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCc-hhHHHHHHHHHHhCCCceEEE--cccC-----------------------CHHH
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNS-SFQIEMIKYAKKTYPELDVIG--GNVV-----------------------TMYQ 302 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~-~~~~~~i~~l~~~~~~~~Vi~--g~V~-----------------------t~e~ 302 (505)
..+.++.+.+.|+|++.+..+.|.. ..+.+.++.+|+ + ++|++. ++.. ...+
T Consensus 25 ~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~-~~Piil~p~~~~~~~~gaD~il~pslln~~~~~~i~g~~ 102 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-Y-PLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTL 102 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-S-CSCEEEECCCSTTCCTTCSEEEEEEETTBSSGGGTTHHH
T ss_pred CHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-c-CCCEEEecCCHHHhhcCCCEEEEccccCCCCcchhhhHH
Confidence 3456667788999999998887754 567888888887 4 777655 3221 1222
Q ss_pred HHHHHHcCC-----CEEE----EccCCccee----------------ecc--------c---ccccCcC-hHHHHHHHHH
Q 010640 303 AQNLIEAGV-----DGLR----VGMGSGSIC----------------TTQ--------E---VCAVGRG-QATAVYKVSS 345 (505)
Q Consensus 303 a~~l~~aGa-----d~I~----v~~g~g~~~----------------~~~--------~---~~g~g~p-~~~~l~~v~~ 345 (505)
.+.+.+.|. +.|- +-+..+... +.+ . ....|.+ ..+.+ .+
T Consensus 103 ~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~~g~~~~v---~~ 179 (235)
T 3w01_A 103 LEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKV---QA 179 (235)
T ss_dssp HHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHH---HH
T ss_pred HHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCCcCCHHHH---HH
Confidence 334455555 4443 211111100 000 0 0012222 22233 33
Q ss_pred HHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 346 IAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 346 ~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
..+.. ++|++..|||++++++.++.. |||+|.+|++|..
T Consensus 180 ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 180 VSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp HHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred HHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 33334 689999999999999988777 9999999999853
No 279
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.02 E-value=0.0092 Score=55.92 Aligned_cols=123 Identities=19% Similarity=0.199 Sum_probs=77.5
Q ss_pred HHHHHHcCccEEEEeCCC--CCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeeccccc
Q 010640 253 LEHLVKAGVNVVVLDSSQ--GNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVC 330 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~--g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~ 330 (505)
+..+.+.|++++.+.-+. -........++...+. +..+++ .|.+.++...+...+.+.|-+- .+...
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~--GL~~iv-cVge~~e~~~~~~~~~~iIaye--------p~wai 149 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEV--GLMTMV-CSNNPAVSAAVAALNPDYVAVE--------PPELI 149 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHH--TCEEEE-EESSHHHHHHHHTTCCSEEEEC--------CTTTT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHC--CCEEEE-EeCCHHHHHHHhcCCCCEEEEe--------Chhhh
Confidence 456778999999883322 1112233344444444 566666 6777777777777787755331 12233
Q ss_pred ccC----cChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCC
Q 010640 331 AVG----RGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGS 386 (505)
Q Consensus 331 g~g----~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~ 386 (505)
|.| ..+.+-+.++.+..+. .+++++..|||.++.|+..+...|+|++.+|+.++.+
T Consensus 150 GtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a 211 (225)
T 1hg3_A 150 GTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKA 211 (225)
T ss_dssp TTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTC
T ss_pred ccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCC
Confidence 333 2222223333333332 2589999999999999999999999999999998753
No 280
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=97.01 E-value=0.0021 Score=65.62 Aligned_cols=131 Identities=15% Similarity=0.106 Sum_probs=81.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEc--ccC----
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGG--NVV---- 298 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g--~V~---- 298 (505)
+.+.+..+.++|.|.|.||.++|+ + ....+.++.+++.++.-+|.+. ...
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g 249 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQN 249 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCC
Confidence 556677788899999999986631 1 2357777788877643355442 100
Q ss_pred -----C--------HHHHHHH---HHcC--CCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCC
Q 010640 299 -----T--------MYQAQNL---IEAG--VDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGI 360 (505)
Q Consensus 299 -----t--------~e~a~~l---~~aG--ad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI 360 (505)
+ ..-++.| .++| +++|.+..+...... .....+..+.+. .+++ ..++|||+.|||
T Consensus 250 ~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~-~~~~~~~~~~~~---~ir~---~~~~PvI~~Ggi 322 (407)
T 3tjl_A 250 MKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNV-DVSEEDQAGDNE---FVSK---IWKGVILKAGNY 322 (407)
T ss_dssp CCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTE-ECCGGGCCCCSH---HHHH---HCCSEEEEESCG
T ss_pred CcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCC-cCCccchhHHHH---HHHH---HhCCCEEecCCC
Confidence 2 2345677 7789 999988632111000 000001011222 2222 246899999999
Q ss_pred CCHHHHHHHHHh---C-CCEEEecccccCC
Q 010640 361 SNSGHIVKALVL---G-ASTVMMGSFLAGS 386 (505)
Q Consensus 361 ~~~~di~kal~l---G-A~~V~~G~~f~~~ 386 (505)
.+..|..+++.. | ||+|++|+.|+..
T Consensus 323 ~~~~dA~~~i~~~~~g~aDlVa~GR~~iaN 352 (407)
T 3tjl_A 323 SYDAPEFKTLKEDIADKRTLVGFSRYFTSN 352 (407)
T ss_dssp GGGTTTTHHHHHHHTTSSEEEECSHHHHHC
T ss_pred CCHHHHHHHHHhhccCCCeEEEeChhhhhC
Confidence 999887777765 4 9999999999754
No 281
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=96.96 E-value=0.013 Score=54.30 Aligned_cols=128 Identities=21% Similarity=0.283 Sum_probs=78.7
Q ss_pred HHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCC--ceEEEcccCCHHHHHHHHHcCCCEEEEcc------------
Q 010640 253 LEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPE--LDVIGGNVVTMYQAQNLIEAGVDGLRVGM------------ 318 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~--~~Vi~g~V~t~e~a~~l~~aGad~I~v~~------------ 318 (505)
++.+.+..+|++.+|...... .-.+.++.+++..+. +|++... ...+....+.++|++.+....
T Consensus 18 ~~~~~~~~~dlvl~D~~~p~~-~g~~~~~~l~~~~~~~~i~vi~~~-~~~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i 95 (237)
T 3cwo_X 18 VEKYKELKPDIVTMDITMPEM-NGIDAIKEIMKIDPNAKIIVCSAM-GQQAMVIEAIKAGAKDFIVNTAAVENPSLITQI 95 (237)
T ss_dssp HHHHHHHCCSCEEEECCSTTS-SHHHHHHHHHHHSSSCCEEEECCS-STHHHHHHHHHTTCCEEEESHHHHHCTHHHHHH
T ss_pred HHHHHhcCCCEEEEeCCCCCC-CHHHHHHHHHHhCCCCCEEEEECC-CCHHHHHHHHHCCHHheEeCCcccChHHHHHHH
Confidence 444455678888887754332 235677777766543 5555432 237777888889988876421
Q ss_pred ----CCcce-------------------------------------------eecc-cccccCcChHHHHHHHHHHHhhc
Q 010640 319 ----GSGSI-------------------------------------------CTTQ-EVCAVGRGQATAVYKVSSIAAQS 350 (505)
Q Consensus 319 ----g~g~~-------------------------------------------~~~~-~~~g~g~p~~~~l~~v~~~~~~~ 350 (505)
+.... ..+. ...|.+-+. . ...+++.....
T Consensus 96 ~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~-~-~~~i~~~~~~~ 173 (237)
T 3cwo_X 96 AQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-D-TEMIRFVRPLT 173 (237)
T ss_dssp HHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTCCSCC-C-HHHHHHHGGGC
T ss_pred HHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeEEEEecCCCCccccc-c-HHHHHHHHHhc
Confidence 00000 0000 001111000 0 22334444455
Q ss_pred CCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 351 GVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 351 ~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
++|+|+.||+.++.++.+++.+||++|++|++|.
T Consensus 174 ~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~ 207 (237)
T 3cwo_X 174 TLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 207 (237)
T ss_dssp CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHH
Confidence 7999999999999999999999999999999984
No 282
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=96.95 E-value=0.0012 Score=63.61 Aligned_cols=76 Identities=16% Similarity=0.257 Sum_probs=54.9
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
..+.++.+.++|++.|.+.--. ....+.+ +.+..+ .+.++..++|++..|||.+..++.+++.+||++|.
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~------~~~~~~g-~~~~~i---~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~ 101 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSID------RDGTKSG-YDTEMI---RFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKAL 101 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETT------TSSCSSC-CCHHHH---HHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEEecC------cccCCCc-ccHHHH---HHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhh
Confidence 4567888899999999874100 0001111 233333 44455678999999999999999999999999999
Q ss_pred eccccc
Q 010640 379 MGSFLA 384 (505)
Q Consensus 379 ~G~~f~ 384 (505)
+|+.++
T Consensus 102 lg~~~~ 107 (266)
T 2w6r_A 102 AASVFH 107 (266)
T ss_dssp CCCCC-
T ss_pred hhHHHH
Confidence 999887
No 283
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=96.95 E-value=0.0015 Score=62.29 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=81.1
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCCHHHHHHHHHcCCCEEEE-ccCCcceeec
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVTMYQAQNLIEAGVDGLRV-GMGSGSICTT 326 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t~e~a~~l~~aGad~I~v-~~g~g~~~~~ 326 (505)
...++.+.++|+|.+.++.... ......++.+|+. ++.+.+ ..-...+..+.+.. .+|.|.+ +..+|.. +
T Consensus 99 ~~~i~~~~~aGAd~itvH~Ea~--~~~~~~i~~ir~~--G~k~Gvalnp~Tp~e~l~~~l~-~vD~VlvMsV~PGfg--G 171 (246)
T 3inp_A 99 DALIESFAKAGATSIVFHPEAS--EHIDRSLQLIKSF--GIQAGLALNPATGIDCLKYVES-NIDRVLIMSVNPGFG--G 171 (246)
T ss_dssp HHHHHHHHHHTCSEEEECGGGC--SCHHHHHHHHHTT--TSEEEEEECTTCCSGGGTTTGG-GCSEEEEECSCTTC----
T ss_pred HHHHHHHHHcCCCEEEEccccc--hhHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHh-cCCEEEEeeecCCCC--C
Confidence 3567888999999999976443 2456777777776 555433 22233444444443 6898866 4444321 1
Q ss_pred ccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
+ .|...++.-+.++++...+ .+++|.++|||. ...+.++..+|||.+.+||.+.
T Consensus 172 Q---~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 172 Q---KFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIF 227 (246)
T ss_dssp C---CCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHH
T ss_pred c---ccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHh
Confidence 1 1222345556666665543 358999999998 6789999999999999999864
No 284
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.94 E-value=0.0041 Score=60.49 Aligned_cols=89 Identities=22% Similarity=0.232 Sum_probs=67.4
Q ss_pred HHHHHHHHHhCCC-ceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 277 IEMIKYAKKTYPE-LDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 277 ~~~i~~l~~~~~~-~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
...++..|+.++. .+|.+ ++.+.++++.+.++|+|+|.+++ ...+.+.++.+..+. ++|+.
T Consensus 183 ~~av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~----------------~~~~~~k~av~~v~~-~ipi~ 244 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDN----------------FPLEALREAVRRVGG-RVPLE 244 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEES----------------CCHHHHHHHHHHHTT-SSCEE
T ss_pred HHHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHHhCC-CCeEE
Confidence 4567777887754 56666 88899999999999999997652 122334444444332 59999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
++||| +...+......|+|++.+|+...
T Consensus 245 AsGGI-t~eni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 245 ASGNM-TLERAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp EESSC-CHHHHHHHHHHTCSEEECTHHHH
T ss_pred EEcCC-CHHHHHHHHHcCCCEEEEcHHHc
Confidence 99998 58999999999999999998654
No 285
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.91 E-value=0.0065 Score=58.15 Aligned_cols=123 Identities=15% Similarity=0.196 Sum_probs=78.7
Q ss_pred HHHHHHHHHHcCccEEEEeCC-----CCCchhHHHHHHHHHHhCC--Cce--EEEcc--cCCHH----HHHHHHHcCCCE
Q 010640 249 DKERLEHLVKAGVNVVVLDSS-----QGNSSFQIEMIKYAKKTYP--ELD--VIGGN--VVTMY----QAQNLIEAGVDG 313 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~-----~g~~~~~~~~i~~l~~~~~--~~~--Vi~g~--V~t~e----~a~~l~~aGad~ 313 (505)
....++.+++.|++.|.+... .|+...+.+.++.+++..+ +.+ ||+-+ ..+.+ .++.+.++|+|+
T Consensus 87 Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADf 166 (260)
T 1p1x_A 87 ALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADF 166 (260)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCE
Confidence 445667788899999876553 3555667788888877642 244 34421 12333 456678899999
Q ss_pred EEEccCCcceeecccccccCcChHHHHHHHHHHHh----hcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 314 LRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAA----QSGVPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 314 I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~----~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
|+.+.|-+. +..++..+...++..+ ..+++|-++|||++..|..+.+.+||+ .+|.-|
T Consensus 167 VKTSTGf~~----------~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~--~lG~~w 228 (260)
T 1p1x_A 167 IKTSTGKVA----------VNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE--LFGADW 228 (260)
T ss_dssp EECCCSCSS----------CCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH--HHCTTS
T ss_pred EEeCCCCCC----------CCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh--hccccc
Confidence 988743110 1124443333333322 235999999999999999999999886 344433
No 286
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.88 E-value=0.0032 Score=59.47 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=80.1
Q ss_pred HHHHHHHHcCccEEEEeCCC-CCchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEE-ccCCcceeecc
Q 010640 251 ERLEHLVKAGVNVVVLDSSQ-GNSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRV-GMGSGSICTTQ 327 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~-g~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v-~~g~g~~~~~~ 327 (505)
..++.+.++|+|.+.++... .. .....++.+++. ++.+.+- +..|+.+...-...++|.+.+ +..+|.. ++
T Consensus 71 ~~i~~~~~aGAd~itvh~Ea~~~--~~~~~i~~i~~~--G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfg--gQ 144 (231)
T 3ctl_A 71 DYIAQLARAGADFITLHPETING--QAFRLIDEIRRH--DMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFA--GQ 144 (231)
T ss_dssp GTHHHHHHHTCSEEEECGGGCTT--THHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCS--SC
T ss_pred HHHHHHHHcCCCEEEECcccCCc--cHHHHHHHHHHc--CCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcC--Cc
Confidence 35688899999999998754 32 356777777776 5554331 344443332222348998865 4444321 11
Q ss_pred cccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEec-cccc
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMG-SFLA 384 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G-~~f~ 384 (505)
.+....+.-+.++++.... .+++|.++|||. ...+.++..+|||.+.+| +.+.
T Consensus 145 ---~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif 200 (231)
T 3ctl_A 145 ---PFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLF 200 (231)
T ss_dssp ---CCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTG
T ss_pred ---cccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHh
Confidence 1222345556666665543 368999999987 677889999999999999 8764
No 287
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.87 E-value=0.00057 Score=64.99 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=55.3
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
..+.++.+.++|+|.|.+.-- .....+. ...+..+. +.+ ..++|++..|||.+..++.+++.+|||+|+
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~------~~~~~~~-~~~~~~i~---~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~ 100 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDL------SNAIENS-GENLPVLE---KLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQI 100 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEH------HHHHHCC-CTTHHHHH---HGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCCEEEEecc------cccccCC-chhHHHHH---HHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEE
Confidence 456788899999999976410 0000011 13344443 333 467999999999999999999999999999
Q ss_pred ecccccCCC
Q 010640 379 MGSFLAGST 387 (505)
Q Consensus 379 ~G~~f~~~~ 387 (505)
+|+.++...
T Consensus 101 lg~~~l~~p 109 (241)
T 1qo2_A 101 VSSKVLEDP 109 (241)
T ss_dssp ECHHHHHCT
T ss_pred ECchHhhCh
Confidence 999876543
No 288
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.87 E-value=0.0055 Score=59.15 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=76.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCC-----CCch---hHHHHHHHHHHhCCCceE--EEc--ccCCHH----HHHHHHHcCCC
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ-----GNSS---FQIEMIKYAKKTYPELDV--IGG--NVVTMY----QAQNLIEAGVD 312 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~-----g~~~---~~~~~i~~l~~~~~~~~V--i~g--~V~t~e----~a~~l~~aGad 312 (505)
....++.+++.|++.|.+...- |+.. .+.+.++.+++..++.++ |+- -..+.+ .++.+.++|+|
T Consensus 108 Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGAD 187 (281)
T 2a4a_A 108 VLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNGNAD 187 (281)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCC
Confidence 4456677888999998776543 3334 567788888887644442 441 112333 34667789999
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHh---------hcCCcEEecCCCCCHHHHHHHHHhCCC
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAA---------QSGVPVIADGGISNSGHIVKALVLGAS 375 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~---------~~~ipvIa~GGI~~~~di~kal~lGA~ 375 (505)
+|+.+.|-+. +..++..+...++..+ ..+++|-++|||++..|+.+.+.+||+
T Consensus 188 fVKTSTGf~~----------~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 188 FIKTSTGKVQ----------INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp EEECCCSCSS----------CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCC----------CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 9988743210 1123333333333332 346999999999999999999999886
No 289
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.85 E-value=0.0017 Score=63.67 Aligned_cols=90 Identities=18% Similarity=0.187 Sum_probs=67.2
Q ss_pred HHHHHHHHHhCCC-ceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhh--cCCc
Q 010640 277 IEMIKYAKKTYPE-LDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGVP 353 (505)
Q Consensus 277 ~~~i~~l~~~~~~-~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~ip 353 (505)
.+.++..++.+|. .++++ ++.|.++++.+.++|+|+|.+++ ++ +..+..+.+..+. .++|
T Consensus 184 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~-------------~~---~~~l~~~v~~l~~~~~~~~ 246 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDN-------------FK---PEELHPTATVLKAQFPSVA 246 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEES-------------CC---HHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECC-------------CC---HHHHHHHHHHhhccCCCee
Confidence 4566677776653 56666 78899999999999999998753 11 2334444444332 1389
Q ss_pred EEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 354 VIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 354 vIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
|.++||| |...+......|||.+.+|+.+.
T Consensus 247 I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 247 VEASGGI-TLDNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp EEEESSC-CTTTHHHHCCTTCCEEECTHHHH
T ss_pred EEEECCC-CHHHHHHHHHCCCCEEEEChhhc
Confidence 9999999 99999999999999999999653
No 290
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.84 E-value=0.0043 Score=58.74 Aligned_cols=130 Identities=14% Similarity=0.002 Sum_probs=81.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCC-------CceEEE-cccCCHHHHHHHHHcCCCEEEE-cc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYP-------ELDVIG-GNVVTMYQAQNLIEAGVDGLRV-GM 318 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~-------~~~Vi~-g~V~t~e~a~~l~~aGad~I~v-~~ 318 (505)
+....++.+.++|+|.+.+|..... .....++++++..+ +..+.+ =+..|+.+.......++|.|.+ +.
T Consensus 80 ~p~~~i~~~~~aGAd~itvH~ea~~--~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv 157 (237)
T 3cu2_A 80 NQLEVAKAVVANGANLVTLQLEQYH--DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTL 157 (237)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTCTT--SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESE
T ss_pred CHHHHHHHHHHcCCCEEEEecCCcc--cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeee
Confidence 3567888999999999999875542 34566666655410 222222 1334444443333458998866 44
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHH--hCCCEEEecccccC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALV--LGASTVMMGSFLAG 385 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~--lGA~~V~~G~~f~~ 385 (505)
++|..... +....+.-+.++++...+ .++||.++|||. ...+.++.. +|||.+.+|+.+..
T Consensus 158 ~pgfggq~-----f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 158 DPRNGTKY-----PSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp ETTTTEEC-----CHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGS
T ss_pred ccCcCCee-----cChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhC
Confidence 44322111 111234445556655533 258999999987 788999999 99999999998753
No 291
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.80 E-value=0.016 Score=54.01 Aligned_cols=124 Identities=15% Similarity=0.090 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--c-ccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--G-NVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g-~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
...++.+.+.|+|.+.+|...+.. .....++.+++. +.++++ - .+. ......+.+.|.+.+++..+ .. +
T Consensus 70 ~t~~~~~~~~Gad~itvh~~~g~~-~l~~~~~~~~~~--g~~~~~~ll~~~t-~~~~~~l~~~~~~~~vl~~a--~~--~ 141 (216)
T 1q6o_A 70 KILSRMCFEANADWVTVICCADIN-TAKGALDVAKEF--NGDVQIELTGYWT-WEQAQQWRDAGIGQVVYHRS--RD--A 141 (216)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCHH-HHHHHHHHHHHT--TCEEEEEECSCCC-HHHHHHHHHTTCCEEEEECC--HH--H
T ss_pred HHHHHHHHhCCCCEEEEeccCCHH-HHHHHHHHHHHc--CCCceeeeeeCCC-hhhHHHHHhcCcHHHHHHHH--HH--H
Confidence 344557889999999998876531 234555556654 555422 1 333 56667777778776655210 00 0
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
...|.+. .+.-+..+++.+. .+.||+++|||. +..+.+++.+||+.+.+|+.+..
T Consensus 142 -~~~G~~g-~~~~i~~lr~~~~-~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 142 -QAAGVAW-GEADITAIKRLSD-MGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRD 196 (216)
T ss_dssp -HHTTCCC-CHHHHHHHHHHHH-TTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHT
T ss_pred -HhcCCCC-CHHHHHHHHHhcC-CCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcC
Confidence 0112111 2444555555553 368899999998 77789999999999999998754
No 292
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.80 E-value=0.0035 Score=59.43 Aligned_cols=77 Identities=21% Similarity=0.276 Sum_probs=54.8
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
..+.++.+.++|+|++.+..-.+ .+.+ ....+..+.+.++..++|+++.||+.++.++.+++.+|||+|.
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~--------~~~~--~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~ 104 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITA--------APEG--RATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVS 104 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCC--------CTTT--HHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCc--------cccC--CcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 45678888999999887641100 0011 1112233444455568999999999999999999999999999
Q ss_pred ecccccC
Q 010640 379 MGSFLAG 385 (505)
Q Consensus 379 ~G~~f~~ 385 (505)
+|+.++.
T Consensus 105 i~~~~~~ 111 (253)
T 1h5y_A 105 VNTAAVR 111 (253)
T ss_dssp ESHHHHH
T ss_pred EChHHhh
Confidence 9988753
No 293
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=96.78 E-value=0.0027 Score=66.58 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=71.5
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHHC-----CCCeeEEeeC-CeeeeEEeechhhhhhcCCCCCCCccCC-C
Q 010640 162 NKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKN-----DVDFVVLEKD-GERLDVVTREDVERLKGYPNLGKGTVGP-D 234 (505)
Q Consensus 162 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~-----~i~~lpVvd~-g~l~GiIt~~dil~~~~~~~~~~~~~d~-~ 234 (505)
.+.++.++|++ ++++++++.++.++++.|.++ ++..+||+|+ ++++|+||.+|++....... ..+. .
T Consensus 153 ~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~~~~~----v~dim~ 226 (473)
T 2zy9_A 153 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTR----VAEIMN 226 (473)
T ss_dssp CTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSCTTSB----GGGTSB
T ss_pred CCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCCCCCc----HHHHhC
Confidence 45689999998 999999999999999999986 5789999998 99999999999997532110 1111 1
Q ss_pred CcceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCC
Q 010640 235 GKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQG 271 (505)
Q Consensus 235 ~~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g 271 (505)
... + .+.......+.++.+.+.+...+.+-...|
T Consensus 227 ~~~-~--~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g 260 (473)
T 2zy9_A 227 PKV-V--YVRTDTDQEEVARLMADYDFTVLPVVDEEG 260 (473)
T ss_dssp SSC-C--CEESSSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred CCC-e--EEeCCCcHHHHHHHHHhcCCcEEEEEcCCC
Confidence 111 1 111233466777777788877765543333
No 294
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.78 E-value=0.01 Score=55.00 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=73.7
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccC-C---------HHHHHHHHHcCCCEEEEcc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVV-T---------MYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~-t---------~e~a~~l~~aGad~I~v~~ 318 (505)
....++.+.+.|+|++.+|...|. +.++.+++.. ++.+...+-. . ..-++...+.|+++++.+.
T Consensus 67 ~~~~v~~~~~~Gad~vtvh~~~g~-----~~i~~~~~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~ 140 (208)
T 2czd_A 67 NRLIARKVFGAGADYVIVHTFVGR-----DSVMAVKELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPG 140 (208)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTCH-----HHHHHHHTTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCC
T ss_pred HHHHHHHHHhcCCCEEEEeccCCH-----HHHHHHHHhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECC
Confidence 456677888999999999887652 3366666653 4444443211 0 1225567788999886541
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCC-HHHHHHHHHhCCCEEEecccccC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN-SGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~-~~di~kal~lGA~~V~~G~~f~~ 385 (505)
..+..+..+++.+. .-+++.+|||+. +.++.+++.+||+.+.+|+.+..
T Consensus 141 ----------------~~~~~i~~lr~~~~--~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~ 190 (208)
T 2czd_A 141 ----------------TRPERIGYIRDRLK--EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYN 190 (208)
T ss_dssp ----------------SSTHHHHHHHHHSC--TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHT
T ss_pred ----------------CChHHHHHHHHhCC--CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhc
Confidence 11223344444432 135779999986 55899999999999999998764
No 295
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=96.78 E-value=0.0091 Score=60.16 Aligned_cols=130 Identities=15% Similarity=0.087 Sum_probs=82.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC-------------------c-----hhHHHHHHHHHHhCCCceEEEc--------
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN-------------------S-----SFQIEMIKYAKKTYPELDVIGG-------- 295 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~-------------------~-----~~~~~~i~~l~~~~~~~~Vi~g-------- 295 (505)
.+.+.++.+.++|.|.|+||.+||+ + +-.++.++.+|+.++.-++.+.
T Consensus 153 ~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~ 232 (358)
T 4a3u_A 153 DYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQ 232 (358)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccC
Confidence 3566677888999999999986542 1 2457788888887643344431
Q ss_pred -ccC--C----HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH
Q 010640 296 -NVV--T----MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK 368 (505)
Q Consensus 296 -~V~--t----~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k 368 (505)
... . ...++.+.+.|++.+.++.+.-.... ..+...+... .+++ ....||+ .||+.++..+.+
T Consensus 233 g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~a~---~ik~---~~~~~v~-~~g~~~~~~ae~ 302 (358)
T 4a3u_A 233 GTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTF---GKTDQPKLSP---EIRK---VFKPPLV-LNQDYTFETAQA 302 (358)
T ss_dssp TBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSS---SBCSSCCCHH---HHHH---HCCSCEE-EESSCCHHHHHH
T ss_pred CCcccchHHHHHHHHHhhhccCccccccccccccCcc---cccccHHHHH---HHHH---hcCCcEE-EeCCCCHHHHHH
Confidence 111 1 22356777899999988643211110 0111112221 2222 2445666 488999999999
Q ss_pred HHHhC-CCEEEecccccCCC
Q 010640 369 ALVLG-ASTVMMGSFLAGST 387 (505)
Q Consensus 369 al~lG-A~~V~~G~~f~~~~ 387 (505)
+|+-| ||+|.+|++|+.-.
T Consensus 303 ~l~~G~aD~V~~gR~~ladP 322 (358)
T 4a3u_A 303 ALDSGVADAISFGRPFIGNP 322 (358)
T ss_dssp HHHHTSCSEEEESHHHHHCT
T ss_pred HHHcCCceEeHhhHHHHhCh
Confidence 99999 99999999998643
No 296
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.75 E-value=0.0077 Score=59.13 Aligned_cols=88 Identities=18% Similarity=0.187 Sum_probs=69.1
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
..+.++..++.+|..++.+ .|.|.++++.+.++|+|+|.+.+ ..+..+.++.+..+ .++++.
T Consensus 218 i~~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn----------------~~~~~l~~av~~l~-~~v~ie 279 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDN----------------FSLEMMREAVKINA-GRAALE 279 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----------------CCHHHHHHHHHHHT-TSSEEE
T ss_pred HHHHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHHhC-CCCeEE
Confidence 4567777888887777777 88999999999999999997753 12344555555443 369999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEeccc
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSF 382 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~ 382 (505)
++||| |...+......|+|.+.+|+.
T Consensus 280 aSGGI-t~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 280 NSGNI-TLDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp EESSC-CHHHHHHHHTTTCSEEECTHH
T ss_pred EECCC-CHHHHHHHHHcCCCEEEECce
Confidence 99998 588888888999999999985
No 297
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.74 E-value=0.0014 Score=64.13 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhCCC-ceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhc----
Q 010640 276 QIEMIKYAKKTYPE-LDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS---- 350 (505)
Q Consensus 276 ~~~~i~~l~~~~~~-~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~---- 350 (505)
..+.++..++.+|. .++++ ++.|.++++.+.++|+|+|.+++. + +..+.++.+..+..
T Consensus 185 i~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------------~---~~~l~~~v~~l~~~~~g~ 247 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNF-------------K---GDGLKMCAQSLKNKWNGK 247 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC------------------------------------
T ss_pred HHHHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC-------------C---HHHHHHHHHHhcccccCC
Confidence 45567777777653 56666 788889999999999999977531 1 12233333333221
Q ss_pred -CCcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 351 -GVPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 351 -~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
++||.++||| |...+.+....|||.+.+|+..
T Consensus 248 ~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 248 KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp -CCEEEEECCC-CC------CCCSCSEEECGGGT
T ss_pred CCeEEEEECCC-CHHHHHHHHHcCCCEEEEechh
Confidence 2899999999 9999999999999999999975
No 298
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.74 E-value=0.0053 Score=59.43 Aligned_cols=89 Identities=20% Similarity=0.160 Sum_probs=69.1
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
..+.++..++..|..++.+ +|.|.++++.+.++|+|+|.+.+ ..+..+.++.+..+ .++++.
T Consensus 185 i~~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn----------------~~~~~l~~av~~~~-~~v~ie 246 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDN----------------FSGEDIDIAVSIAR-GKVALE 246 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----------------CCHHHHHHHHHHHT-TTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcC----------------CCHHHHHHHHHhhc-CCceEE
Confidence 4566777777766788877 89999999999999999997753 12344555555443 368999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
++||| |...+......|+|.+.+|+..
T Consensus 247 aSGGI-t~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 247 VSGNI-DRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp EESSC-CTTTHHHHHTTTCSEEECSHHH
T ss_pred EECCC-CHHHHHHHHHcCCCEEEEChhh
Confidence 99998 7788888889999999999764
No 299
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.73 E-value=0.0058 Score=59.38 Aligned_cols=90 Identities=10% Similarity=0.116 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhh--cCCc
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGVP 353 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~ip 353 (505)
....++..++.+|..++.+ ++.+.++++.+.++|+|.|.+.+ .++..+.++.+..+. .+++
T Consensus 181 i~~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn----------------~~~~~~~~~v~~l~~~~~~v~ 243 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDN----------------FAVWQTQTAVQRRDSRAPTVM 243 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEET----------------CCHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHHhhccCCCeE
Confidence 3567777888876557777 88899999999999999997653 122334444444433 1589
Q ss_pred EEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 354 VIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 354 vIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
+.++||| |...+.+....|+|.+.+|+..
T Consensus 244 ieaSGGI-t~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 244 LESSGGL-SLQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp EEEESSC-CTTTHHHHHHTTCSEEECGGGT
T ss_pred EEEECCC-CHHHHHHHHhcCCCEEEECHHH
Confidence 9999998 7888999999999999999865
No 300
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.73 E-value=0.002 Score=61.15 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=54.2
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
..+.++.+.++|+|.+.+..-.+ .+. +.+....+ .+.++.+++|++..|||.++.++..++.+|||.|.
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~------~~~--~~~~~~~i---~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~ 101 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDA------AFG--RGSNHELL---AEVVGKLDVQVELSGGIRDDESLAAALATGCARVN 101 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHH------HTT--SCCCHHHH---HHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcc------ccc--CCChHHHH---HHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 35667888899999997741000 011 11222333 34445568999999999999999999999999999
Q ss_pred ecccccC
Q 010640 379 MGSFLAG 385 (505)
Q Consensus 379 ~G~~f~~ 385 (505)
+|+..+.
T Consensus 102 lg~~~l~ 108 (244)
T 2y88_A 102 VGTAALE 108 (244)
T ss_dssp ECHHHHH
T ss_pred ECchHhh
Confidence 9987654
No 301
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.65 E-value=0.0071 Score=58.68 Aligned_cols=89 Identities=12% Similarity=0.121 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
..+.++..|+..|..++.+ +|.|.++++.+.++|+|.|.+.+ .++..+.++.+..+. ++.+.
T Consensus 194 i~~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn----------------~s~~~l~~av~~~~~-~v~le 255 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDN----------------MSISEIKKAVDIVNG-KSVLE 255 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEES----------------CCHHHHHHHHHHHTT-SSEEE
T ss_pred HHHHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHhhcC-ceEEE
Confidence 4567777888777778877 89999999999999999997653 123455555554443 68999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
+|||| |...+......|+|.+.+|+..
T Consensus 256 aSGGI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 256 VSGCV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp EESSC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred EECCC-CHHHHHHHHHcCCCEEEeCccc
Confidence 99998 7778888888999999999754
No 302
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.65 E-value=0.02 Score=53.51 Aligned_cols=127 Identities=13% Similarity=0.047 Sum_probs=79.3
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.....+.+.+.|+|.+.+|...|. ..+...++.+++.- +...+.+- +..+.+.++.+.+.|++.+.+..+..
T Consensus 71 p~t~~~~~~~~Gad~vtVH~~~g~-~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~---- 145 (221)
T 3exr_A 71 GGTVAKNNAVRGADWMTCICSATI-PTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRD---- 145 (221)
T ss_dssp HHHHHHHHHTTTCSEEEEETTSCH-HHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHH----
T ss_pred HHHHHHHHHHcCCCEEEEeccCCH-HHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHh----
Confidence 334445578899999999887663 22445555555542 11334332 22367788888888998776632110
Q ss_pred cccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
+ ...|. +....-+..+++.+. .+.+|..+||| ++.++..+..+|||.+.+|+++.
T Consensus 146 ~-~~~Gv-v~s~~e~~~ir~~~~-~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 146 A-LLAGE-TWGEKDLNKVKKLIE-MGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp H-HHHTC-CCCHHHHHHHHHHHH-HTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHH
T ss_pred c-CCCcc-ccCHHHHHHHHHhhc-CCceEEEECCC-CHHHHHHHHHCCCCEEEECchhh
Confidence 0 01221 122333444455443 36889999999 66788899999999999999864
No 303
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.63 E-value=0.0021 Score=61.02 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=53.7
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
..+.++.+.++|+|.+.+..-.+ .+. +.+....+ .+.++.+++|++..|||.++.++..++.+|||.|.
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~------~~~--~~~~~~~i---~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~ 102 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDA------AFG--TGDNRALI---AEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVN 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHH------HHT--SCCCHHHH---HHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCch------hhc--CCChHHHH---HHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 34567888899999997641000 011 11222333 34445568999999999999999999999999999
Q ss_pred ecccccC
Q 010640 379 MGSFLAG 385 (505)
Q Consensus 379 ~G~~f~~ 385 (505)
+|+..+.
T Consensus 103 lg~~~l~ 109 (244)
T 1vzw_A 103 LGTAALE 109 (244)
T ss_dssp ECHHHHH
T ss_pred ECchHhh
Confidence 9987653
No 304
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.62 E-value=0.0031 Score=61.31 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhCCC-ceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhh--cCC
Q 010640 276 QIEMIKYAKKTYPE-LDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGV 352 (505)
Q Consensus 276 ~~~~i~~l~~~~~~-~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~i 352 (505)
....++..|+.+|. .+|.+ +|.|.++++.+.++|+|+|.+.+ -.+..+.++.+..+. .++
T Consensus 179 i~~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn----------------~~~e~l~~av~~l~~~~~~v 241 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDN----------------LSPEEVKDISRRIKDINPNV 241 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----------------CCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHHhhccCCCc
Confidence 45677777777754 67777 78899999999999999997753 123444444444432 158
Q ss_pred cEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 353 PVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 353 pvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
|+.++||| |...+......|+|.+.+|+...
T Consensus 242 ~ieASGGI-t~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 242 IVEVSGGI-TEENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp EEEEEECC-CTTTGGGGCCTTCCEEEEGGGTS
T ss_pred eEEEECCC-CHHHHHHHHHcCCCEEEEeHHHc
Confidence 99999998 67888888899999999998653
No 305
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=96.58 E-value=0.0059 Score=59.41 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEE
Q 010640 276 QIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVI 355 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvI 355 (505)
..+.++..++..|..++.+ +|.|.++++.+.++|+|+|.+.+ ..+..+.++.+... .++++.
T Consensus 196 i~~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn----------------~~~~~l~~av~~i~-~~v~ie 257 (298)
T 3gnn_A 196 VGEALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDN----------------FTLDMMRDAVRVTE-GRAVLE 257 (298)
T ss_dssp HHHHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEES----------------CCHHHHHHHHHHHT-TSEEEE
T ss_pred HHHHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECC----------------CCHHHHHHHHHHhC-CCCeEE
Confidence 4567777888877666666 78999999999999999997753 12344444444332 358999
Q ss_pred ecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 356 ADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 356 a~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
++||| |...+......|+|.+.+|+.-
T Consensus 258 aSGGI-~~~~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 258 VSGGV-NFDTVRAIAETGVDRISIGALT 284 (298)
T ss_dssp EESSC-STTTHHHHHHTTCSEEECGGGG
T ss_pred EEcCC-CHHHHHHHHHcCCCEEEECCee
Confidence 99998 7778888889999999999853
No 306
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=96.54 E-value=0.0029 Score=60.85 Aligned_cols=69 Identities=12% Similarity=0.059 Sum_probs=50.3
Q ss_pred HHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 302 QAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS--GVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 302 ~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~--~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
-++.....|...+.+..++ + ......+..+++ .. ++|++..|||++.+|+.+++.+|||.|.+
T Consensus 191 Ya~~gad~G~~lV~LD~~~------~------~v~~e~V~~I~~---~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVV 255 (286)
T 3vk5_A 191 YLHVARAFGFHMVYLYSRN------E------HVPPEVVRHFRK---GLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGF 255 (286)
T ss_dssp HHHHHHHTTCSEEEEECSS------S------CCCHHHHHHHHH---HSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEEcCCC------C------cCCHHHHHHHHH---hcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 3444556788888876321 1 112344444444 35 69999999999999999999999999999
Q ss_pred cccccC
Q 010640 380 GSFLAG 385 (505)
Q Consensus 380 G~~f~~ 385 (505)
||++..
T Consensus 256 GSAav~ 261 (286)
T 3vk5_A 256 AGALEQ 261 (286)
T ss_dssp SGGGSS
T ss_pred Cchhhc
Confidence 999853
No 307
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.48 E-value=0.025 Score=53.20 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=78.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cc------c---CCHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GN------V---VTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~------V---~t~e~a~~l~~aGad~I~v 316 (505)
...+.+..+.++|+..+.+. ..+.++.+|+.. ++||+. +. + .+.+++..+.++|+|+|.+
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~--------~~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l 107 (229)
T 3q58_A 37 IVAAMAQAAASAGAVAVRIE--------GIENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAF 107 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEEE--------SHHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEEEEC--------CHHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEE
Confidence 46677888888999999762 246788888887 889863 21 2 2567899999999999976
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
..... ..| ..+.+..+.+++.++++++ .+.+..++.+|..+|||.+.+.
T Consensus 108 ~~~~~-----------~~p--~~l~~~i~~~~~~g~~v~~--~v~t~eea~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 108 DASFR-----------SRP--VDIDSLLTRIRLHGLLAMA--DCSTVNEGISCHQKGIEFIGTT 156 (229)
T ss_dssp ECCSS-----------CCS--SCHHHHHHHHHHTTCEEEE--ECSSHHHHHHHHHTTCSEEECT
T ss_pred Ccccc-----------CCh--HHHHHHHHHHHHCCCEEEE--ecCCHHHHHHHHhCCCCEEEec
Confidence 42110 012 1233444555566888888 8999999999999999999653
No 308
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.46 E-value=0.027 Score=53.12 Aligned_cols=110 Identities=18% Similarity=0.160 Sum_probs=78.5
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--c----c--c---CCHHHHHHHHHcCCCEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--G----N--V---VTMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g----~--V---~t~e~a~~l~~aGad~I~ 315 (505)
....+.+..+.+.|+..+.+. ..+.++.+|+.. ++||+. + + + .+.++++.+.++|+|+|.
T Consensus 36 ~~~~~~A~a~~~~Ga~~i~~~--------~~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~ 106 (232)
T 3igs_A 36 EIVAAMALAAEQAGAVAVRIE--------GIDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIA 106 (232)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE--------SHHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred chHHHHHHHHHHCCCeEEEEC--------CHHHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEE
Confidence 346777888888999998762 246788888887 889863 2 1 2 256789999999999997
Q ss_pred EccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 316 VGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
+..... ..| ..+.+..+.+++.++++++ .+.+..++.++..+|||.+.++
T Consensus 107 l~~~~~-----------~~p--~~l~~~i~~~~~~g~~v~~--~v~t~eea~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 107 VDGTAR-----------QRP--VAVEALLARIHHHHLLTMA--DCSSVDDGLACQRLGADIIGTT 156 (232)
T ss_dssp EECCSS-----------CCS--SCHHHHHHHHHHTTCEEEE--ECCSHHHHHHHHHTTCSEEECT
T ss_pred ECcccc-----------CCH--HHHHHHHHHHHHCCCEEEE--eCCCHHHHHHHHhCCCCEEEEc
Confidence 642110 012 1233444555566788888 7999999999999999999653
No 309
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.28 E-value=0.034 Score=54.96 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=70.0
Q ss_pred HHHHHHcCccEEEEeCCCCC--ch----hHHHHHHHHHHhC--CCceEEE-----c-cc---CC-----------HHHHH
Q 010640 253 LEHLVKAGVNVVVLDSSQGN--SS----FQIEMIKYAKKTY--PELDVIG-----G-NV---VT-----------MYQAQ 304 (505)
Q Consensus 253 ~~~lieaGad~I~i~~~~g~--~~----~~~~~i~~l~~~~--~~~~Vi~-----g-~V---~t-----------~e~a~ 304 (505)
++.+++.|+|++.+....+. .. .....+.++.+.+ -++|+++ + .+ .+ .+.++
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R 195 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMK 195 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHH
Confidence 66788999999877653321 11 2344454444432 1677654 2 11 12 12345
Q ss_pred HH--HHcCCCEEEEccCCcceeecccccccC-----cChHHHHHHHHHHHhhcCCcEE-ecCCCCCHHH----HHHHHHh
Q 010640 305 NL--IEAGVDGLRVGMGSGSICTTQEVCAVG-----RGQATAVYKVSSIAAQSGVPVI-ADGGISNSGH----IVKALVL 372 (505)
Q Consensus 305 ~l--~~aGad~I~v~~g~g~~~~~~~~~g~g-----~p~~~~l~~v~~~~~~~~ipvI-a~GGI~~~~d----i~kal~l 372 (505)
.+ .+.|+|.+++-. +|...+ +.|++ ...-++.....+......+|+| .+||. +..+ +..|+.+
T Consensus 196 ~~~~~elGaDv~Kve~-p~~~~~---v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~~A~~a 270 (332)
T 3iv3_A 196 VFSAERFGIDVLKVEV-PVNMVY---VEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLVFAHKA 270 (332)
T ss_dssp HHTSGGGCCSEEEECC-SSCGGG---BTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHhhcCcCCcEEEEec-CCChhh---hcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHHHHHHc
Confidence 55 467999999862 111110 11221 1223333334444455679965 79997 4444 4467789
Q ss_pred CC--CEEEecccc
Q 010640 373 GA--STVMMGSFL 383 (505)
Q Consensus 373 GA--~~V~~G~~f 383 (505)
|| .+|.+|+..
T Consensus 271 Ga~f~Gv~~GRnv 283 (332)
T 3iv3_A 271 GAKFNGVLCGRAT 283 (332)
T ss_dssp TCCCCEEEECHHH
T ss_pred CCCcceEEeeHHH
Confidence 99 999999874
No 310
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.25 E-value=0.037 Score=50.95 Aligned_cols=128 Identities=16% Similarity=0.147 Sum_probs=80.1
Q ss_pred ceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccC--CHHH-HHHHHHcCCCE
Q 010640 237 WMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVV--TMYQ-AQNLIEAGVDG 313 (505)
Q Consensus 237 l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~--t~e~-a~~l~~aGad~ 313 (505)
++++.+....++..+.++.+. .++|++.+..+.- ...-.+.++.+|+.+++.|+.+.... ..+. ++.+.++|+|+
T Consensus 3 li~a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~-~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~ 80 (211)
T 3f4w_A 3 LQLALDELTLPEAMVFMDKVV-DDVDIIEVGTPFL-IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADY 80 (211)
T ss_dssp EEEEECSCCHHHHHHHHHHHG-GGCSEEEECHHHH-HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred EEEEeCCCCHHHHHHHHHHhh-cCccEEEeCcHHH-HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCE
Confidence 445555444445666666663 6899998743110 11224678888888667888663322 3454 88999999999
Q ss_pred EEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEec-CCCCCH-HHHHHHHHhCCCEEEecc
Q 010640 314 LRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIAD-GGISNS-GHIVKALVLGASTVMMGS 381 (505)
Q Consensus 314 I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~-GGI~~~-~di~kal~lGA~~V~~G~ 381 (505)
+.+... +....+.++.+.+++.+++++.+ -+..++ ..+.++..+|++.|.+..
T Consensus 81 v~v~~~---------------~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 81 VTVLGV---------------TDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp EEEETT---------------SCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEEC
T ss_pred EEEeCC---------------CChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 977311 11223345556666677887763 345666 447788899999987753
No 311
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.23 E-value=0.035 Score=54.20 Aligned_cols=111 Identities=23% Similarity=0.221 Sum_probs=78.0
Q ss_pred HHHHHHHHHcCccEEEEeC--------CCC-CchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEccC
Q 010640 250 KERLEHLVKAGVNVVVLDS--------SQG-NSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVGMG 319 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~--------~~g-~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~~g 319 (505)
.+.++...++|++.+.+-. ..| ......+.++.+++.. ++||+++ .+...+.++.+..+|||+|..+..
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD~Id~s~~ 109 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVDMLDESEV 109 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCCEEEcCCC
Confidence 3778888889999987641 122 2223578888999887 8999986 456689999999999999932210
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
.....+ .+.+++ .+++++. ++.+..+..+++.+||++|.+..
T Consensus 110 ----~~~~~l--------------i~~i~~~~~g~~vvv--~v~~~~Ea~~a~~~Gad~I~v~g 153 (297)
T 4adt_A 110 ----LTMADE--------------YNHINKHKFKTPFVC--GCTNLGEALRRISEGASMIRTKG 153 (297)
T ss_dssp ----SCCSCS--------------SCCCCGGGCSSCEEE--EESSHHHHHHHHHHTCSEEEECC
T ss_pred ----CCHHHH--------------HHHHHhcCCCCeEEE--EeCCHHHHHHHHhCCCCEEEECC
Confidence 000000 111112 4688988 79999999999999999987763
No 312
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.22 E-value=0.019 Score=54.37 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccE
Q 010640 184 DLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNV 263 (505)
Q Consensus 184 ~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~ 263 (505)
...++.+.+.+.++..+|++. +....++.+.+.|+++
T Consensus 123 ~tv~aa~~L~~~Gf~Vlpy~~-------------------------------------------dd~~~akrl~~~G~~a 159 (265)
T 1wv2_A 123 ETLKAAEQLVKDGFDVMVYTS-------------------------------------------DDPIIARQLAEIGCIA 159 (265)
T ss_dssp HHHHHHHHHHTTTCEEEEEEC-------------------------------------------SCHHHHHHHHHSCCSE
T ss_pred HHHHHHHHHHHCCCEEEEEeC-------------------------------------------CCHHHHHHHHHhCCCE
Confidence 356788888888998888652 1346678888999999
Q ss_pred EEEeCC---CCCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 264 VVLDSS---QGNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 264 I~i~~~---~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
+..... .|......+.++.+++.. ++|||+ |++.+++++..+.+.|+|++.|+
T Consensus 160 VmPlg~pIGsG~Gi~~~~lI~~I~e~~-~vPVI~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 160 VMPLAGLIGSGLGICNPYNLRIILEEA-KVPVLVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp EEECSSSTTCCCCCSCHHHHHHHHHHC-SSCBEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred EEeCCccCCCCCCcCCHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 966332 122222367888888864 899877 69999999999999999999886
No 313
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.11 E-value=0.057 Score=50.62 Aligned_cols=177 Identities=11% Similarity=0.045 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHCCCCe--eEEeeCCeeeeEEee-chhhhhhcCCCCCCCccCCCCcceEEE--eecCCccHHHHHHHHH
Q 010640 183 YDLGQIDEVLEKNDVDF--VVLEKDGERLDVVTR-EDVERLKGYPNLGKGTVGPDGKWMVGA--AIGTRESDKERLEHLV 257 (505)
Q Consensus 183 ~~l~~a~~~l~~~~i~~--lpVvd~g~l~GiIt~-~dil~~~~~~~~~~~~~d~~~~l~v~a--~i~~~~~~~e~~~~li 257 (505)
..+.+.++.+.+.+.+. +=|.| |.++=.+|. -.+++.+.. ..+...+-+ .+..++ ..++.+.
T Consensus 18 ~~l~~~i~~~~~~g~d~iHvDvmD-g~fvpn~t~G~~~v~~lr~---------~~p~~~~dvhLmv~dp~---~~i~~~~ 84 (227)
T 1tqx_A 18 SKLAEETQRMESLGAEWIHLDVMD-MHFVPNLSFGPPVINNLKK---------YTKSIFFDVHLMVEYPE---KYVPLLK 84 (227)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEB-SSSSSCBCCCHHHHHHHGG---------GCSSCEEEEEEESSCGG---GGGGGCT
T ss_pred hhHHHHHHHHHHcCCCEEEEEEEe-CCcCcchhcCHHHHHHHHH---------hCCCCcEEEEEEEcCHH---HHHHHHH
Confidence 35788889998888775 44554 443334444 344444321 110122222 332222 2334444
Q ss_pred HcCccEEEEeCCCCCchhHHHHHH---HHHHhCCCceEEEc-ccC-CHHHHHHHHHcC-CCEEEE-ccCCcceeeccccc
Q 010640 258 KAGVNVVVLDSSQGNSSFQIEMIK---YAKKTYPELDVIGG-NVV-TMYQAQNLIEAG-VDGLRV-GMGSGSICTTQEVC 330 (505)
Q Consensus 258 eaGad~I~i~~~~g~~~~~~~~i~---~l~~~~~~~~Vi~g-~V~-t~e~a~~l~~aG-ad~I~v-~~g~g~~~~~~~~~ 330 (505)
+ +|.+.+|...... .....++ .+++. +..+.+. +.. ..+..+.+..+| +|.|.+ +..+|-. ++
T Consensus 85 ~--Ad~itvH~ea~~~-~~~~~i~~~~~i~~~--G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~--gq--- 154 (227)
T 1tqx_A 85 T--SNQLTFHFEALNE-DTERCIQLAKEIRDN--NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFG--GQ--- 154 (227)
T ss_dssp T--SSEEEEEGGGGTT-CHHHHHHHHHHHHTT--TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCS--SC---
T ss_pred h--CCEEEEeecCCcc-CHHHHHHHHHHHHHc--CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCC--Cc---
Confidence 4 9999998754321 2345666 77776 5555442 333 345566676766 999966 3444321 11
Q ss_pred ccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 331 AVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 331 g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
.+....+.-+.++++... +++|.++|||. ...+.++..+|||.+.+||.+..
T Consensus 155 ~f~~~~l~ki~~lr~~~~--~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 155 SFMHDMMGKVSFLRKKYK--NLNIQVDGGLN-IETTEISASHGANIIVAGTSIFN 206 (227)
T ss_dssp CCCGGGHHHHHHHHHHCT--TCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHHT
T ss_pred ccchHHHHHHHHHHHhcc--CCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHhC
Confidence 122234455555555443 68999999997 67999999999999999998653
No 314
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.08 E-value=0.13 Score=48.61 Aligned_cols=122 Identities=12% Similarity=0.086 Sum_probs=89.0
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEccc-CCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNV-VTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V-~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
..+.++ ..++|+.++.|-+...+..+..+.++.+++.. ++||+-|.. .++-....+..+|||+|-+-. .
T Consensus 66 p~~iA~-~~~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v-~lPvLrKDFiid~yQI~eAr~~GADaILLI~--------a 135 (258)
T 4a29_A 66 PIEYAK-FMERYAVGLSITTEEKYFNGSYETLRKIASSV-SIPILMSDFIVKESQIDDAYNLGADTVLLIV--------K 135 (258)
T ss_dssp HHHHHH-HHTTTCSEEEEECCSTTTCCCHHHHHHHHTTC-SSCEEEESCCCSHHHHHHHHHHTCSEEEEEG--------G
T ss_pred HHHHHH-HHhCCCeEEEEeCCCCCCCCCHHHHHHHHHhc-CCCEeeccccccHHHHHHHHHcCCCeeehHH--------h
Confidence 445554 55789999988665544455677888888887 899999875 578888888899999996531 1
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccCCCC
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTE 388 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~~~E 388 (505)
.+ + -..+.+..+.+...+..++. =+.|..++.+|+.+||+.+++=.+=+.+-|
T Consensus 136 ~L-----~-~~~l~~l~~~A~~lGl~~Lv--EVh~~~El~rAl~~~a~iIGINNRnL~tf~ 188 (258)
T 4a29_A 136 IL-----T-ERELESLLEYARSYGMEPLI--LINDENDLDIALRIGARFIGIMSRDFETGE 188 (258)
T ss_dssp GS-----C-HHHHHHHHHHHHHTTCCCEE--EESSHHHHHHHHHTTCSEEEECSBCTTTCC
T ss_pred hc-----C-HHHHHHHHHHHHHHhHHHHH--hcchHHHHHHHhcCCCcEEEEeCCCccccc
Confidence 11 1 12344556667778888888 699999999999999999988766554443
No 315
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.04 E-value=0.083 Score=49.04 Aligned_cols=114 Identities=19% Similarity=0.123 Sum_probs=75.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc--------cc---CCHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG--------NV---VTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g--------~V---~t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+.++|++.+.++. .+.++.+++.+ ++|++.. .+ .+.+.+..+.++|+|++.+
T Consensus 24 ~~~~~a~~~~~~Ga~~i~~~~--------~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l 94 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRANT--------KEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIAL 94 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEES--------HHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHHCCCeeeccCC--------HHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEE
Confidence 456778888899999997742 35677788876 7887521 11 2567888899999999977
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSF 382 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~ 382 (505)
.... ...........+..+++... +.+++. ++.+..++.++..+|++.++++..
T Consensus 95 ~~~~--------~~~p~~~~~~~i~~~~~~~~--~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 95 DATL--------QQRPKETLDELVSYIRTHAP--NVEIMA--DIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp ECSC--------SCCSSSCHHHHHHHHHHHCT--TSEEEE--ECSSHHHHHHHHHTTCSEEECTTT
T ss_pred eeec--------ccCcccCHHHHHHHHHHhCC--CceEEe--cCCCHHHHHHHHHcCCCEEEeCCC
Confidence 5211 00000011223333333221 677776 788999999999999999987754
No 316
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=95.99 E-value=0.07 Score=50.75 Aligned_cols=117 Identities=8% Similarity=0.084 Sum_probs=85.6
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccC-CHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVV-TMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~-t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+..+.+..+.+. +.++.+-+...+..+..+.++.+++.. ++||+.+... +.-....+..+|||+|-+-.
T Consensus 62 ~~~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~v-~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~-------- 131 (251)
T 1i4n_A 62 SLEDFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARNLT-CRPILAKDFYIDTVQVKLASSVGADAILIIA-------- 131 (251)
T ss_dssp CHHHHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHTTC-CSCEEEECCCCSTHHHHHHHHTTCSEEEEEG--------
T ss_pred CHHHHHHHHHHh-CCceEEEecccccCCCHHHHHHHHHhC-CCCEEEeeCCCCHHHHHHHHHcCCCEEEEec--------
Confidence 466777777777 888887554443444567778888876 8999988653 44456778899999996631
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHh-CCCEEEeccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVL-GASTVMMGSF 382 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~l-GA~~V~~G~~ 382 (505)
.. .+ ...+.+..+.+++.+..+++ =+.|..++.+|+.+ |++.+++=.+
T Consensus 132 a~-----l~-~~~l~~l~~~a~~lGl~~lv--Ev~~~eE~~~A~~l~g~~iIGinnr 180 (251)
T 1i4n_A 132 RI-----LT-AEQIKEIYEAAEELGMDSLV--EVHSREDLEKVFSVIRPKIIGINTR 180 (251)
T ss_dssp GG-----SC-HHHHHHHHHHHHTTTCEEEE--EECSHHHHHHHHTTCCCSEEEEECB
T ss_pred cc-----CC-HHHHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHhcCCCCEEEEeCc
Confidence 11 11 13455666777778899999 78899999999999 9998887654
No 317
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=95.95 E-value=0.018 Score=58.93 Aligned_cols=133 Identities=18% Similarity=0.163 Sum_probs=75.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCC------------------------chhHHHHHHHHHHhCCCceEEEc----cc--
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGN------------------------SSFQIEMIKYAKKTYPELDVIGG----NV-- 297 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~------------------------~~~~~~~i~~l~~~~~~~~Vi~g----~V-- 297 (505)
++.+.+..+.++|.|.|+||.+||+ .+-.++.++.+|+.++.-+|.+. +.
T Consensus 173 ~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~ 252 (400)
T 4gbu_A 173 EYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFN 252 (400)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 3667778888999999999986642 13457888888888754466552 00
Q ss_pred --C----C--H----HHHHHHHHcC-----CCEEEEccCCc-ceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCC
Q 010640 298 --V----T--M----YQAQNLIEAG-----VDGLRVGMGSG-SICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGG 359 (505)
Q Consensus 298 --~----t--~----e~a~~l~~aG-----ad~I~v~~g~g-~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GG 359 (505)
. + . +.+..+...+ .+.+.+..... ..........+..+.... ++ +..++|||+.||
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---ir---~~~~~pvi~~G~ 326 (400)
T 4gbu_A 253 SMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDF---VY---SIWKGPVIRAGN 326 (400)
T ss_dssp TCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTH---HH---HHCCSCEEEESS
T ss_pred CCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHH---HH---HHhCCCEEEeCC
Confidence 0 0 1 1222333322 22332221000 000000000111111111 12 235799999999
Q ss_pred CCCHHHHHHHHHh-CCCEEEecccccCC
Q 010640 360 ISNSGHIVKALVL-GASTVMMGSFLAGS 386 (505)
Q Consensus 360 I~~~~di~kal~l-GA~~V~~G~~f~~~ 386 (505)
+.+..++++++.. +||+|.+|++|+.-
T Consensus 327 ~~~~~~~~~~~~~~~aDlV~~gR~~iad 354 (400)
T 4gbu_A 327 FALHPEVVREEVKDKRTLIGYGRFFISN 354 (400)
T ss_dssp CTTCHHHHHHHTTSTTEEEECCHHHHHC
T ss_pred CCChHHHHHHHHcCCCeEhHHHHHHHHC
Confidence 9998888888765 59999999999864
No 318
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=95.95 E-value=0.11 Score=48.24 Aligned_cols=124 Identities=18% Similarity=0.169 Sum_probs=89.2
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+...+.++.+.+.+..++ |-.+. ...-+..++.+.+. ++++-+.-+.|...|..+.++|+++|.. ..+
T Consensus 67 e~mi~eA~~L~~~~~nv~-IKIP~--T~eGl~A~~~L~~~--GI~vn~TlifS~~QA~~Aa~AGa~yISP-------fvg 134 (223)
T 3s1x_A 67 EGMVEEARKIHGLGDNAV-VKIPM--TEDGLRAIKTLSSE--HINTNCTLVFNPIQALLAAKAGVTYVSP-------FVG 134 (223)
T ss_dssp HHHHHHHHHHHHTCTTEE-EEEES--SHHHHHHHHHHHHT--TCCEEEEEECSHHHHHHHHHTTCSEEEE-------BSH
T ss_pred HHHHHHHHHHHHhCCCEE-EEeCC--CHHHHHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHcCCeEEEe-------ecc
Confidence 345666777777765443 32221 12335666677666 7888777788999999999999998832 333
Q ss_pred ccccccCcChHHHHHHHHHHHhhcC--CcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSG--VPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~--ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
| ..+||.+....+.++.++.+.++ ..|++ ..+++..++..|..+|||.+-+...++
T Consensus 135 R-i~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-AS~Rn~~~v~~aa~~G~d~~Tip~~vl 192 (223)
T 3s1x_A 135 R-LDDIGEDGMQIIDMIRTIFNNYIIKTQILV-ASIRNPIHVLRSAVIGADVVTVPFNVL 192 (223)
T ss_dssp H-HHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-BSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred h-HhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-EeCCCHHHHHHHHHcCCCEEEeCHHHH
Confidence 3 45678888888888888877654 44554 579999999999999999998886543
No 319
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.79 E-value=0.085 Score=50.38 Aligned_cols=111 Identities=17% Similarity=0.158 Sum_probs=77.1
Q ss_pred HHHHHHHHHHcCccEEEEeC--------CCCC-chhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEcc
Q 010640 249 DKERLEHLVKAGVNVVVLDS--------SQGN-SSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~--------~~g~-~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~~ 318 (505)
..+.++.+.++|+.++..-- ..|. .....+.++.+++.. .+|||.+ -+....+|+.+..+|+|+|+-+-
T Consensus 20 ~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aV-sIPVm~k~righ~~EAqilea~GaD~IDese 98 (291)
T 3o07_A 20 TPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSV-SIPVMAKVRIGHFVEAQIIEALEVDYIDESE 98 (291)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhC-CCCeEEEEecCcHHHHHHHHHcCCCEEeccc
Confidence 34777778888998886531 1121 123468888899988 8999986 45678999999999999997651
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
.. ........ +.+ .+.++|+++ |++|-.+..+++..||+++.
T Consensus 99 vl---tpad~~~~-----------I~k--~~f~vpfv~--~~~~l~EAlrri~eGA~mIr 140 (291)
T 3o07_A 99 VL---TPADWTHH-----------IEK--DKFKVPFVC--GAKDLGEALRRINEGAAMIR 140 (291)
T ss_dssp TS---CCSCSSCC-----------CCG--GGCSSCEEE--EESSHHHHHHHHHHTCSEEE
T ss_pred CC---CHHHHHHH-----------hhh--hcCCCcEEe--eCCCHHHHHHHHHCCCCEEE
Confidence 10 00000000 000 135789999 99999999999999999765
No 320
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.79 E-value=0.12 Score=51.84 Aligned_cols=113 Identities=19% Similarity=0.267 Sum_probs=71.9
Q ss_pred HHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 250 KERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 250 ~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
.+.+..+.++ |+.++. . .-......+.++++++.. +.|+.+. .+.+.+.++.+.++|+|+|.+....
T Consensus 59 ~~lA~avA~~GGlgii~--~-~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~------- 127 (361)
T 3khj_A 59 HLMAVGMARLGGIGIIH--K-NMDMESQVNEVLKVKNSG-GLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAH------- 127 (361)
T ss_dssp HHHHHHHHHTTCEEEEC--S-SSCHHHHHHHHHHHHHTT-CCCCEEEECTTCHHHHHHHHHTTCSEEEECCSC-------
T ss_pred HHHHHHHHHcCCCeEEe--c-CCCHHHHHHHHHHHHhcc-CceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCC-------
Confidence 3555555544 565553 2 112345666777777653 5665552 2334788999999999999874221
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
|.|. ..+..+.+..+..++|||+ |++.+..++.++..+|||+|.+|
T Consensus 128 -----G~~~-~~~~~i~~i~~~~~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 128 -----GHSL-NIIRTLKEIKSKMNIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp -----CSBH-HHHHHHHHHHHHCCCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred -----CCcH-HHHHHHHHHHHhcCCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 1121 1112233333344799998 78899999999999999999986
No 321
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=95.72 E-value=0.13 Score=47.50 Aligned_cols=125 Identities=17% Similarity=0.126 Sum_probs=88.5
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+...+.++.+.+.+..++ |-.+. ...-+..++.+.+. ++++-+.-+.|...|..+.++|+++|.. ..+
T Consensus 65 e~mi~ea~~l~~~~~nv~-IKIP~--T~eGl~A~~~L~~~--GI~vn~TlifS~~Qa~~Aa~AGa~yISP-------fvg 132 (212)
T 3r8r_A 65 EEMIEEGKELAKIAPNIT-VKIPM--TSDGLKAVRALTDL--GIKTNVTLIFNANQALLAARAGATYVSP-------FLG 132 (212)
T ss_dssp HHHHHHHHHHHTTCTTEE-EEEES--SHHHHHHHHHHHHT--TCCEEEEEECSHHHHHHHHHHTCSEEEE-------BHH
T ss_pred HHHHHHHHHHHHhCCCEE-EEeCC--CHHHHHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHcCCeEEEe-------ccc
Confidence 345566667777665443 32221 12235666677666 7888777788999999999999998832 333
Q ss_pred ccccccCcChHHHHHHHHHHHhhcC-CcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSG-VPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~-ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
| ..+||.|....+.++.++.+.++ -.-|..-.+++..++..|..+|||.+-+...++
T Consensus 133 R-i~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~Tip~~vl 190 (212)
T 3r8r_A 133 R-LDDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVI 190 (212)
T ss_dssp H-HHHTTSCHHHHHHHHHHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred h-hhhcCCChHHHHHHHHHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEEEcCHHHH
Confidence 3 45678888888999888877664 233434689999999999999999998886543
No 322
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=95.67 E-value=0.036 Score=64.46 Aligned_cols=69 Identities=10% Similarity=0.101 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCc------------hhHHHHHHHHHHhC------CCceEEE-cccCCHHHHHHHHHc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNS------------SFQIEMIKYAKKTY------PELDVIG-GNVVTMYQAQNLIEA 309 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~------------~~~~~~i~~l~~~~------~~~~Vi~-g~V~t~e~a~~l~~a 309 (505)
....+..+.++|+|+|.++...|.. ..+...+..+++.+ .++||++ |++.+..++.+++.+
T Consensus 1006 i~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaL 1085 (1479)
T 1ea0_A 1006 IGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAML 1085 (1479)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHc
Confidence 4456777889999999997754321 12345555555532 2588877 899999999999999
Q ss_pred CCCEEEEc
Q 010640 310 GVDGLRVG 317 (505)
Q Consensus 310 Gad~I~v~ 317 (505)
||+++-++
T Consensus 1086 GAdaV~iG 1093 (1479)
T 1ea0_A 1086 GAEEFGIG 1093 (1479)
T ss_dssp TCSEEECC
T ss_pred CCCeeeEc
Confidence 99999775
No 323
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.65 E-value=0.2 Score=46.40 Aligned_cols=128 Identities=9% Similarity=0.027 Sum_probs=80.0
Q ss_pred CcceEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCCHH-HHHHHHHcCC
Q 010640 235 GKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVTMY-QAQNLIEAGV 311 (505)
Q Consensus 235 ~~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t~e-~a~~l~~aGa 311 (505)
.+++++.+....++..+.++.+ +.++|++.++...-. ..-.+.++.+|+.+++.+++. +-...++ .++.+.++|+
T Consensus 7 ~~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~~-~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 7 PMIQIALDQTNLTDAVAVASNV-ASYVDVIEVGTILAF-AEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGA 84 (218)
T ss_dssp CEEEEEECCSSHHHHHHHHHHH-GGGCSEEEECHHHHH-HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTC
T ss_pred CCeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCcHHHH-hcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCC
Confidence 4567777765555566666664 668999988542100 111467888888876666643 2112233 4688899999
Q ss_pred CEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEe-cCCCCCHHHHHHHHHhCCCEEEe
Q 010640 312 DGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIA-DGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 312 d~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa-~GGI~~~~di~kal~lGA~~V~~ 379 (505)
|++.+-. .+....+.++.+.+++.++..+. .=|+.|+.++..+..+|++.+.+
T Consensus 85 d~i~vh~---------------~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 85 DWITVSA---------------AAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp SEEEEET---------------TSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEec---------------CCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceee
Confidence 9996621 11122344455555666776653 33677899999999999997755
No 324
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=95.57 E-value=0.1 Score=47.84 Aligned_cols=125 Identities=19% Similarity=0.149 Sum_probs=72.3
Q ss_pred eEEEeecCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE--cccCC-HHH-HHHHHHcCCCE
Q 010640 238 MVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG--GNVVT-MYQ-AQNLIEAGVDG 313 (505)
Q Consensus 238 ~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~--g~V~t-~e~-a~~l~~aGad~ 313 (505)
+++.+....++..+.++.+.+ +++++.+...+- ...-.+.++.+++.+|+.|+++ + +.+ ++. ++.+.++|+|+
T Consensus 4 i~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~-~~~g~~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~Gad~ 80 (207)
T 3ajx_A 4 QVAIDLLSTEAALELAGKVAE-YVDIIELGTPLI-KAEGLSVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAGADL 80 (207)
T ss_dssp EEEECCSCHHHHHHHHHHHGG-GCSEEEECHHHH-HHHCTHHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTTCSE
T ss_pred EEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHHH-HhhCHHHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCCCCE
Confidence 444443333445566666655 789988844210 1112356778888876777765 4 345 566 88899999999
Q ss_pred EEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEe-cCCCCCHHHHH-HHHHhCCCEEEec
Q 010640 314 LRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIA-DGGISNSGHIV-KALVLGASTVMMG 380 (505)
Q Consensus 314 I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa-~GGI~~~~di~-kal~lGA~~V~~G 380 (505)
+.+.... ....+..+.+.+++.+.++-. --...|+.+.+ .+..+|++.|.+.
T Consensus 81 v~vh~~~---------------~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 81 VTVLGSA---------------DDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp EEEETTS---------------CHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEE
T ss_pred EEEeccC---------------ChHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEE
Confidence 9663111 112233455556555666522 11233777744 4457799998554
No 325
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.43 E-value=0.15 Score=52.72 Aligned_cols=119 Identities=10% Similarity=0.064 Sum_probs=86.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccC-CHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVV-TMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~-t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+..+.+....+. +.+|.+-+...+..+..+.++.+++.. ++||+.+... +.-....+..+|||+|-+-.
T Consensus 69 ~~~~iA~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~v-~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~-------- 138 (452)
T 1pii_A 69 DPARIAAIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQIA-PQPILCKDFIIDPYQIYLARYYQADACLLML-------- 138 (452)
T ss_dssp CHHHHHHHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEET--------
T ss_pred CHHHHHHHHHhh-CcEEEEEecccccCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHcCCCEEEEEc--------
Confidence 456667766666 999988654443444456777888887 8999988653 55567778899999996631
Q ss_pred ccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
..+ + ...+.+..+.+++.+..+++ =+.|..++.+|+.+||+.+++=.+=+
T Consensus 139 a~l-----~-~~~l~~l~~~a~~lgm~~Lv--Evh~~eE~~~A~~lga~iIGinnr~L 188 (452)
T 1pii_A 139 SVL-----D-DDQYRQLAAVAHSLEMGVLT--EVSNEEEQERAIALGAKVVGINNRDL 188 (452)
T ss_dssp TTC-----C-HHHHHHHHHHHHHTTCEEEE--EECSHHHHHHHHHTTCSEEEEESEET
T ss_pred ccC-----C-HHHHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHHCCCCEEEEeCCCC
Confidence 111 1 13455666677778999999 89999999999999999998875533
No 326
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=95.27 E-value=0.079 Score=53.94 Aligned_cols=97 Identities=20% Similarity=0.188 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHhCCCceEEE--cccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcC
Q 010640 274 SFQIEMIKYAKKTYPELDVIG--GNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSG 351 (505)
Q Consensus 274 ~~~~~~i~~l~~~~~~~~Vi~--g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ 351 (505)
....+.++++++. ++++++ +.-...+.++.+.++|+|++.+...+ . ...+..|.. ...++.+.++..+
T Consensus 142 ~~~~~~i~~~~~~--g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~---~----~~~~~~~~~-~~~~i~~l~~~~~ 211 (393)
T 2qr6_A 142 ELLSERIAQVRDS--GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTL---I----SAEHVNTGG-EALNLKEFIGSLD 211 (393)
T ss_dssp HHHHHHHHHHHHT--TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSS---C----CSSCCCC------CHHHHHHHCS
T ss_pred HHHHHHHHHHhhc--CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCc---c----ccccCCCcc-cHHHHHHHHHhcC
Confidence 3445566666665 566554 22224566777888999999764111 0 011212211 1112344445568
Q ss_pred CcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 352 VPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 352 ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
+|||+ ||+.++.++.+++.+|||+|.+|.
T Consensus 212 ~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 212 VPVIA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp SCEEE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred CCEEE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 99999 999999999999999999999975
No 327
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=95.15 E-value=0.17 Score=48.68 Aligned_cols=123 Identities=15% Similarity=0.061 Sum_probs=76.6
Q ss_pred HHHHHHHHHHcCccEEEEeCCC--------CCchhHHHHHHHHHHhCCC--ceEEE--cccCCHH----HHHHHHHcCCC
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ--------GNSSFQIEMIKYAKKTYPE--LDVIG--GNVVTMY----QAQNLIEAGVD 312 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~--------g~~~~~~~~i~~l~~~~~~--~~Vi~--g~V~t~e----~a~~l~~aGad 312 (505)
....++.+++.|++-|-+...- |+...+.+.++.+++...+ +.||+ +...+.+ ..+.+.++|+|
T Consensus 102 K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGAD 181 (297)
T 4eiv_A 102 VSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAAVAALEGGAD 181 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCC
Confidence 4455667888899988665543 2233455666677776533 34455 2233444 33557789999
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHh---------------------hcCCcEEec-CCCCCHHHHHHHH
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAA---------------------QSGVPVIAD-GGISNSGHIVKAL 370 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~---------------------~~~ipvIa~-GGI~~~~di~kal 370 (505)
+|+-|.|-+. +..++..+...++..+ ..++.|=++ |||++..|..+.+
T Consensus 182 FVKTSTGf~~----------~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i 251 (297)
T 4eiv_A 182 FLQTSSGLGA----------THATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLM 251 (297)
T ss_dssp EEECCCSSSS----------CCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHHHHH
T ss_pred EEEcCCCCCC----------CCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHH
Confidence 9988744211 1133444443344332 235889999 9999999999999
Q ss_pred HhCCCEEEeccccc
Q 010640 371 VLGASTVMMGSFLA 384 (505)
Q Consensus 371 ~lGA~~V~~G~~f~ 384 (505)
.+... +|.-++
T Consensus 252 ~~~~e---lG~~wl 262 (297)
T 4eiv_A 252 QMIFE---NGPRSI 262 (297)
T ss_dssp HHHHH---HCGGGC
T ss_pred HHHHH---hCcccc
Confidence 98666 776665
No 328
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.08 E-value=0.2 Score=50.36 Aligned_cols=113 Identities=19% Similarity=0.227 Sum_probs=69.4
Q ss_pred HHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc---ccCCHHHHHHHHHcCCCEEEEccCCcceee
Q 010640 250 KERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG---NVVTMYQAQNLIEAGVDGLRVGMGSGSICT 325 (505)
Q Consensus 250 ~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g---~V~t~e~a~~l~~aGad~I~v~~g~g~~~~ 325 (505)
.+.+..+.++ |+-++. .. -......+.++.+++.- ...+.++ +....+.++.+.++|+|+|.+....
T Consensus 60 ~~lA~avA~aGGlg~i~--~~-~s~e~~~~~i~~vk~~~-~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~----- 130 (366)
T 4fo4_A 60 ARLAIALAQEGGIGFIH--KN-MSIEQQAAQVHQVKISG-GLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSH----- 130 (366)
T ss_dssp HHHHHHHHHTTCEEEEC--SS-SCHHHHHHHHHHHHTTT-SCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSC-----
T ss_pred HHHHHHHHHcCCceEee--cC-CCHHHHHHHHHHHHhcC-ceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCC-----
Confidence 4555555555 555443 22 12355667777777642 2333332 1245789999999999999773111
Q ss_pred cccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhCCCEEEec
Q 010640 326 TQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLGASTVMMG 380 (505)
Q Consensus 326 ~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lGA~~V~~G 380 (505)
|.+. ..+..+.+..+.. ++|||+ |.+.+..++.++..+|||+|.+|
T Consensus 131 -------G~~~-~~~~~I~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 131 -------GHSE-GVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp -------TTSH-HHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred -------CCCH-HHHHHHHHHHHhcCCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 1121 1222223333333 688888 66999999999999999999995
No 329
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.91 E-value=0.23 Score=46.33 Aligned_cols=110 Identities=18% Similarity=0.133 Sum_probs=74.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE---cc-----c---CCHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG---GN-----V---VTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~---g~-----V---~t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+.++|++.+.++. .+.++.+++.. ++|++. +. + .+.+.++.+.++|+|+|.+
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~--------~~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l 107 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS--------VRDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAM 107 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES--------HHHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEeecCC--------HHHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEE
Confidence 567889999999999998752 25677777776 788742 11 1 2567899999999999977
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEE
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTV 377 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V 377 (505)
..... .+. .+......+..+++... +.+++. ++.+..++.+++.+|||.+
T Consensus 108 ~~~~~----~~~---~~~~~~~~i~~i~~~~~--~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 108 DCTKR----DRH---DGLDIASFIRQVKEKYP--NQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp ECCSS----CCT---TCCCHHHHHHHHHHHCT--TCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred ccccc----CCC---CCccHHHHHHHHHHhCC--CCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 52110 000 01122334444444321 577777 8899999999999999999
No 330
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.75 E-value=0.078 Score=53.10 Aligned_cols=69 Identities=23% Similarity=0.433 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC---CCc--------hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ---GNS--------SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~---g~~--------~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~ 315 (505)
+..+.++.+.++|++.+.++... |.+ ...++.++.+++.++++||++ |++.|.+++..+.+ |+|++.
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~ 223 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVM 223 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEE
Confidence 35677888899999999997632 211 124788899999877899877 88899999999998 999998
Q ss_pred Ec
Q 010640 316 VG 317 (505)
Q Consensus 316 v~ 317 (505)
++
T Consensus 224 iG 225 (350)
T 3b0p_A 224 LG 225 (350)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 331
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=94.44 E-value=0.046 Score=51.85 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=52.8
Q ss_pred HHHHHHHHHcCCCEEEEc-cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEE
Q 010640 300 MYQAQNLIEAGVDGLRVG-MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVM 378 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~-~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~ 378 (505)
.+.|+...+.|+|.+.+- ..+. ..+ ..+....+. +.++...+|+-..|||++-.++.+.|.+||+-|.
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a-------~~~-~~~~~~~i~---~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVi 102 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGA-------KDP-SKRQFALIE---KLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVV 102 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHH-------HCG-GGCCHHHHH---HHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEEecCcc-------ccc-chhHHHHHH---HHHHhcCCCeEeccccccHHHHHHHHHcCCCEEE
Confidence 356777888999987552 1110 011 112334443 3444567999999999999999999999999999
Q ss_pred ecccccC
Q 010640 379 MGSFLAG 385 (505)
Q Consensus 379 ~G~~f~~ 385 (505)
+||....
T Consensus 103 i~t~a~~ 109 (243)
T 4gj1_A 103 IGSMAIK 109 (243)
T ss_dssp ECTTTTT
T ss_pred Ecccccc
Confidence 9997654
No 332
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.43 E-value=0.24 Score=49.33 Aligned_cols=70 Identities=16% Similarity=0.323 Sum_probs=55.2
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCC--C-----CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQ--G-----NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~--g-----~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
++..+.++.+.++|+|++.++... . .....++.++.+++.+ ++||++ |.+.+.+++..+++.| +|+|.++
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 457788899999999999986421 0 1123567888899987 788877 7888999999999999 9999775
No 333
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.39 E-value=0.29 Score=48.34 Aligned_cols=66 Identities=14% Similarity=0.311 Sum_probs=52.0
Q ss_pred HHHHHHHHcCccEEEEeCC--CCC--chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 251 ERLEHLVKAGVNVVVLDSS--QGN--SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~--~g~--~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
+.+..+.+.|+|.+.++.. .|+ ....++.+..+++.. ++||++ |++.+.+++..+..+|++++.++
T Consensus 135 ~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 135 SLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEec
Confidence 5566778899999999762 222 124677888888776 788876 88999999999999999999986
No 334
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.34 E-value=0.19 Score=49.81 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC----------------CCc-----hhHHHHHHHHHHhCC-CceEEE-cccCCHHHHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ----------------GNS-----SFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQ 304 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~----------------g~~-----~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~ 304 (505)
+..+.++.+.++|+|.|.++... |.+ ...++.++.+++..+ ++||++ |++.+.+++.
T Consensus 226 ~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~ 305 (336)
T 1f76_A 226 ELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAR 305 (336)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHH
Confidence 35667888999999999986431 111 123577778887764 688876 8999999999
Q ss_pred HHHHcCCCEEEEc
Q 010640 305 NLIEAGVDGLRVG 317 (505)
Q Consensus 305 ~l~~aGad~I~v~ 317 (505)
+++.+|||+|.++
T Consensus 306 ~~l~~GAd~V~ig 318 (336)
T 1f76_A 306 EKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHTCSEEEES
T ss_pred HHHHCCCCEEEee
Confidence 9999999999775
No 335
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=94.29 E-value=0.3 Score=49.15 Aligned_cols=70 Identities=17% Similarity=0.267 Sum_probs=54.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC----------------CCc-----hhHHHHHHHHHHhCC-CceEEE-cccCCHHHHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ----------------GNS-----SFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQ 304 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~----------------g~~-----~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~ 304 (505)
+..+.++.+.++|+|.++++.+. |.+ ...++.++.+++.++ ++|||+ |++.|.+++.
T Consensus 235 ~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~ 314 (367)
T 3zwt_A 235 DKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDAL 314 (367)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHH
Confidence 45667888889999999986432 111 113578888988875 688876 8999999999
Q ss_pred HHHHcCCCEEEEc
Q 010640 305 NLIEAGVDGLRVG 317 (505)
Q Consensus 305 ~l~~aGad~I~v~ 317 (505)
+++.+|||++.++
T Consensus 315 ~~l~~GAd~V~vg 327 (367)
T 3zwt_A 315 EKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHTCSEEEES
T ss_pred HHHHcCCCEEEEC
Confidence 9999999999886
No 336
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.04 E-value=0.031 Score=50.47 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred cCCcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 350 SGVPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 350 ~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
.++|+|+.|+|++.+|+.+ +.+||++|.-|+.=
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~ 180 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRI 180 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHH
T ss_pred cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHH
Confidence 5789999999999999999 99999999999763
No 337
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=93.96 E-value=0.27 Score=50.12 Aligned_cols=70 Identities=17% Similarity=0.246 Sum_probs=54.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCC--------------Cc-----hhHHHHHHHHHHhCC-CceEEE-cccCCHHHHHHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQG--------------NS-----SFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQNL 306 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g--------------~~-----~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~~l 306 (505)
+..+.++.+.++|+|.|+++.+.. .+ ...++.++.+++... ++|||. |+|.+.++|.++
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~ 363 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 363 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHH
Confidence 356778888999999998865321 11 123578888888764 588876 899999999999
Q ss_pred HHcCCCEEEEc
Q 010640 307 IEAGVDGLRVG 317 (505)
Q Consensus 307 ~~aGad~I~v~ 317 (505)
+.+|||++.++
T Consensus 364 l~aGAd~VqIg 374 (415)
T 3i65_A 364 IEAGASVCQLY 374 (415)
T ss_dssp HHHTEEEEEES
T ss_pred HHcCCCEEEEc
Confidence 99999999886
No 338
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=93.96 E-value=0.17 Score=50.33 Aligned_cols=67 Identities=19% Similarity=0.297 Sum_probs=52.9
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCch----------h--HHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEE
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSS----------F--QIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~----------~--~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v 316 (505)
.+.++.+.++|+|.|.+....|... . .++.+.++++.. ++||++ |++.+..++.+++.+|||++.+
T Consensus 160 ~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAdaV~i 238 (336)
T 1ypf_A 160 PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGATMVMI 238 (336)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCCEEEe
Confidence 4678889999999999843222110 1 477788888876 899987 8999999999999999999988
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
+
T Consensus 239 G 239 (336)
T 1ypf_A 239 G 239 (336)
T ss_dssp S
T ss_pred C
Confidence 6
No 339
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=93.94 E-value=0.54 Score=46.96 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=82.9
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEcc--cCCHHHH----HHHHHcCCCEEEEccC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGGN--VVTMYQA----QNLIEAGVDGLRVGMG 319 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g~--V~t~e~a----~~l~~aGad~I~v~~g 319 (505)
++..+.+..+.++|.+.+-++..++......+.++.+|+.+ ++.++.+.- --+.+++ +.+.+.|++.|.-..
T Consensus 146 ~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~- 224 (359)
T 1mdl_A 146 KLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPT- 224 (359)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEECCS-
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEECCC-
Confidence 44556677788899999999876544456788889999887 578887731 1255544 556678888774211
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
.......+. +..+..++||++++.+.+..++.+++..| +|+|++...
T Consensus 225 -------------~~~~~~~~~---~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 225 -------------LQHDYEGHQ---RIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp -------------CTTCHHHHH---HHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred -------------ChhhHHHHH---HHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 011233333 33445679999999999999999999987 888888643
No 340
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=93.91 E-value=0.37 Score=48.41 Aligned_cols=119 Identities=8% Similarity=0.058 Sum_probs=82.5
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEccC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGMG 319 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~g 319 (505)
++..+.+..+.+.|.+.+-+...++......+.++.+|+.+ ++.++.+. .--+.+++ +.+.+.|++.|.-..
T Consensus 148 e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~- 226 (371)
T 2ovl_A 148 ADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIEEPT- 226 (371)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCS-
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC-
Confidence 44566777788899999998876544456778889999887 57888773 12255554 445557888774211
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
.......+..++ +..++||++++.+.+..++.+++..| +|+|++...
T Consensus 227 -------------~~~d~~~~~~l~---~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 274 (371)
T 2ovl_A 227 -------------IPDDLVGNARIV---RESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVS 274 (371)
T ss_dssp -------------CTTCHHHHHHHH---HHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTT
T ss_pred -------------CcccHHHHHHHH---hhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCcc
Confidence 011233343333 34579999999999999999999887 889888643
No 341
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.83 E-value=0.54 Score=46.36 Aligned_cols=183 Identities=17% Similarity=0.179 Sum_probs=112.6
Q ss_pred eeeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEcC-CCC-HHHHHHHHHhhhccCCccccCCCee--EeCC--
Q 010640 46 STRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVHS-NCT-AADQARLVVSAKSRRVPIFSSSLDV--FKAP-- 119 (505)
Q Consensus 46 ~~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~~-~~~-~~~~~~~v~~v~~~~~~~~~~p~~~--~v~~-- 119 (505)
.+++|..+.+++|+|++||.+++..+++.++++.|++|++.. ..+ ++...+.++++++..+ .|..+ .+++
T Consensus 5 ~~~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~----~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 5 RTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTD----RPFGVNLTLLPTQ 80 (328)
T ss_dssp CCHHHHHHTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCS----SCCEEEEEECCCS
T ss_pred hhhHHHHhCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcC----CCeEEEEeccccc
Confidence 456788888999999999999999999999999999999853 344 7776666776654332 23111 1110
Q ss_pred -CCCHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCCCCHHHHHHHHHHCCCC
Q 010640 120 -DGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVD 198 (505)
Q Consensus 120 -~~tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~ 198 (505)
+....+.++.+.+ ...+.+.++.+.+ .+..+.+++.++
T Consensus 81 ~~~~~~~~~~~~~~---------------------------------------~g~d~V~~~~g~p-~~~~~~l~~~gi- 119 (328)
T 2gjl_A 81 KPVPYAEYRAAIIE---------------------------------------AGIRVVETAGNDP-GEHIAEFRRHGV- 119 (328)
T ss_dssp SCCCHHHHHHHHHH---------------------------------------TTCCEEEEEESCC-HHHHHHHHHTTC-
T ss_pred cCccHHHHHHHHHh---------------------------------------cCCCEEEEcCCCc-HHHHHHHHHcCC-
Confidence 1112222222111 0001222222222 233333333322
Q ss_pred eeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccEEEEeCCC--CCc---
Q 010640 199 FVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQ--GNS--- 273 (505)
Q Consensus 199 ~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~--g~~--- 273 (505)
.+...+. ..+.+..+.+.|+|.+.++... |+.
T Consensus 120 ---------------------------------------~vi~~v~----t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~ 156 (328)
T 2gjl_A 120 ---------------------------------------KVIHKCT----AVRHALKAERLGVDAVSIDGFECAGHPGED 156 (328)
T ss_dssp ---------------------------------------EEEEEES----SHHHHHHHHHTTCSEEEEECTTCSBCCCSS
T ss_pred ---------------------------------------CEEeeCC----CHHHHHHHHHcCCCEEEEECCCCCcCCCCc
Confidence 2222332 2245666788999999996532 231
Q ss_pred -hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 274 -SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 274 -~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
...++.++.+++.. ++||++ |++.+.+++..+..+|+|++.++
T Consensus 157 ~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 24567888888776 788876 78889999999999999999986
No 342
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=93.82 E-value=0.45 Score=47.78 Aligned_cols=211 Identities=18% Similarity=0.189 Sum_probs=123.0
Q ss_pred eeeecCcccccceEEEccchh-hhHHHHHHHHHHcCCeeEEcCC-CCHHHHHHHHHhhhccCCccccCCCeeE--eCCCC
Q 010640 46 STRLTRNIDLSLPCVASPMDT-VTEDYMAAAMAALGGIGIVHSN-CTAADQARLVVSAKSRRVPIFSSSLDVF--KAPDG 121 (505)
Q Consensus 46 ~~~lt~~~~l~~Pli~a~m~~-vt~~~ma~al~~~Gg~g~i~~~-~~~~~~~~~v~~v~~~~~~~~~~p~~~~--v~~~~ 121 (505)
+|++|..+ .+|+|++||.. ++..+|+.++++.||+|++... .+++...+.+++++...+ .|+.+. +....
T Consensus 2 ~t~~~~~~--~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~~----~p~gVnl~~~~~~ 75 (369)
T 3bw2_A 2 SSALTDLF--PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLTG----RPFGVNVFMPQPE 75 (369)
T ss_dssp -CTTTTSS--SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHCC----SCEEEEEECCCCC
T ss_pred CchhhhhC--cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhCC----CCeEEEEecCCCC
Confidence 56777766 89999999984 9999999999999999999754 588888788877765432 331121 11110
Q ss_pred -----CHHHHHHHhcCCeEEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCCCCHHHHHHHHHHCC
Q 010640 122 -----CINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKND 196 (505)
Q Consensus 122 -----tv~~a~~~~~~~~~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~ 196 (505)
...+..+.+... .. ....+ +..+ .+..+..+.+.++.+.+.+
T Consensus 76 ~~~~~~~~~~~~~l~~~----~~---------------------~~g~~---~~~~-----~~~~~~~~~~~~~~~~~~g 122 (369)
T 3bw2_A 76 LAESGAVEVYAHQLAGE----AA---------------------WYETE---LGDP-----DGGRDDGYDAKLAVLLDDP 122 (369)
T ss_dssp C---CHHHHHHHHTHHH----HH---------------------HTTCC---CCCS-----CSCSSTTHHHHHHHHHHSC
T ss_pred cccHHHHHHHHHHHHHH----HH---------------------HcCCC---cCcc-----cccccccHHHHHHHHHhcC
Confidence 011111111110 00 00000 0000 0112334567777777766
Q ss_pred CCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccEEEEeCCC--CC--
Q 010640 197 VDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSSQ--GN-- 272 (505)
Q Consensus 197 i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~~--g~-- 272 (505)
.+.+-+- -+.. ..++++.... . .+.+...+.+ .+.+..+.+.|+|++.++... |+
T Consensus 123 ~~~V~~~-~g~~-----~~~~i~~~~~---------~--g~~v~~~v~t----~~~a~~a~~~GaD~i~v~g~~~GGh~g 181 (369)
T 3bw2_A 123 VPVVSFH-FGVP-----DREVIARLRR---------A--GTLTLVTATT----PEEARAVEAAGADAVIAQGVEAGGHQG 181 (369)
T ss_dssp CSEEEEE-SSCC-----CHHHHHHHHH---------T--TCEEEEEESS----HHHHHHHHHTTCSEEEEECTTCSEECC
T ss_pred CCEEEEe-CCCC-----cHHHHHHHHH---------C--CCeEEEECCC----HHHHHHHHHcCCCEEEEeCCCcCCcCC
Confidence 6533221 0100 1123332211 1 1344444432 345677888999999996531 11
Q ss_pred -c----------hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 273 -S----------SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 273 -~----------~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
. ...++.++.+++.. ++||++ |++.+.+.+..++.+|+|++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaaGGI~~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 182 THRDSSEDDGAGIGLLSLLAQVREAV-DIPVVAAGGIMRGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CcccccccccccccHHHHHHHHHHhc-CceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 1 23478888888876 788876 78889999999999999999886
No 343
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.80 E-value=0.7 Score=46.61 Aligned_cols=119 Identities=13% Similarity=0.108 Sum_probs=82.1
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc--ccCCHHHH----HHHHHcCCCEEEEccC
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGMG 319 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~g 319 (505)
.+...+.+..+.++|.+.+-+.... ......+.++.+|+.+++.++.+. .--+.+++ +.+.+.|++.|.-..
T Consensus 148 ~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP~- 225 (384)
T 2pgw_A 148 AEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQPT- 225 (384)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS-
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCCC-
Confidence 4456677778888999999987643 345567888889988766777663 11255554 455567888874211
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
. ......+..+ .+..++||++++.+.+..++.+++..| +|+|++...
T Consensus 226 ----------~---~~~~~~~~~l---~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~ 273 (384)
T 2pgw_A 226 ----------V---SWSIPAMAHV---REKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPR 273 (384)
T ss_dssp ----------C---TTCHHHHHHH---HHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred ----------C---hhhHHHHHHH---HhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcch
Confidence 0 1123333333 344679999999999999999999987 899998543
No 344
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.76 E-value=0.49 Score=45.43 Aligned_cols=68 Identities=21% Similarity=0.218 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCccEEEEeCC---CC----CchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDSS---QG----NSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~---~g----~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~ 317 (505)
..++++.+.+.+..++-..+. .| .+....+.++.+|+.. ++|+++| ++.++++++.+...|+|+++||
T Consensus 162 ~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 162 SDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 447787787777666644221 22 2345678889998886 7899885 7789999998999999999996
No 345
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=93.74 E-value=0.23 Score=51.18 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=58.4
Q ss_pred EEEeecCCc---cHHHHHHHHHHcCccEEEEeCCCC--------------Cc-----hhHHHHHHHHHHhCC-CceEEE-
Q 010640 239 VGAAIGTRE---SDKERLEHLVKAGVNVVVLDSSQG--------------NS-----SFQIEMIKYAKKTYP-ELDVIG- 294 (505)
Q Consensus 239 v~a~i~~~~---~~~e~~~~lieaGad~I~i~~~~g--------------~~-----~~~~~~i~~l~~~~~-~~~Vi~- 294 (505)
+.+.+.... +..+.++.+.++|+|.|.++.... .+ ...++.++.+++..+ ++|||.
T Consensus 300 V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~ 379 (443)
T 1tv5_A 300 VFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 379 (443)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE
Confidence 555554321 456678888999999998865422 11 113678888888864 688876
Q ss_pred cccCCHHHHHHHHHcCCCEEEEc
Q 010640 295 GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 295 g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
|+|.+.++|.+.+.+|||+|.++
T Consensus 380 GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 380 GGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp SSCCSHHHHHHHHHTTEEEEEES
T ss_pred CCCCCHHHHHHHHHcCCCEEEEc
Confidence 89999999999999999999775
No 346
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=93.64 E-value=0.28 Score=46.56 Aligned_cols=67 Identities=15% Similarity=0.153 Sum_probs=49.0
Q ss_pred HHHHHHHHcCccEEEEeCC---CCCchhHHHHHHHHHHhCCC-ceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 251 ERLEHLVKAGVNVVVLDSS---QGNSSFQIEMIKYAKKTYPE-LDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~---~g~~~~~~~~i~~l~~~~~~-~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
..++.+.+.|++++.--.+ .|......+.++.+++..++ +|||+ |++.+++++..+.+.|+|++.|+
T Consensus 136 ~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 136 VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 6677788889999844221 12222235667888883346 88876 79999999999999999999886
No 347
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=93.53 E-value=0.48 Score=46.28 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCccEE-EEe-----C-C-CCC-chhHHHHHHHHHHhCCCceEEEccc-CCHHHHHHHHHcCCCEEEEcc
Q 010640 249 DKERLEHLVKAGVNVV-VLD-----S-S-QGN-SSFQIEMIKYAKKTYPELDVIGGNV-VTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 249 ~~e~~~~lieaGad~I-~i~-----~-~-~g~-~~~~~~~i~~l~~~~~~~~Vi~g~V-~t~e~a~~l~~aGad~I~v~~ 318 (505)
..+.++.+.++|++++ .++ . . .|. .....+.++.+++.+ ++|++++.- ...+.++.+.++|+|+|...
T Consensus 30 ~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~-~iPv~~k~r~g~~~~~~~~~a~GAd~V~~~- 107 (305)
T 2nv1_A 30 NAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV-SIPVMAKARIGHIVEARVLEAMGVDYIDES- 107 (305)
T ss_dssp SHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC-SSCEEEEECTTCHHHHHHHHHHTCSEEEEC-
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC-CCCEEecccccchHHHHHHHHCCCCEEEEe-
Confidence 4578888899999999 443 1 1 120 112356777788776 789887532 33788888999999999521
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
..... .... ...+ +...+++++. ++.+..++.+++.+||+.|.+
T Consensus 108 ~~l~~---~~~~-----------~~i~-~~~~g~~v~~--~~~~~~e~~~a~~~Gad~V~~ 151 (305)
T 2nv1_A 108 EVLTP---ADEE-----------FHLN-KNEYTVPFVC--GCRDLGEATRRIAEGASMLRT 151 (305)
T ss_dssp TTSCC---SCSS-----------CCCC-GGGCSSCEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred ccCCH---HHHH-----------HHHH-HhccCCcEEE--EeCCHHHHHHHHHCCCCEEEe
Confidence 10000 0000 0011 2245688888 889999999999999999988
No 348
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=93.43 E-value=0.078 Score=56.53 Aligned_cols=77 Identities=21% Similarity=0.209 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCEEEEc-cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCH-----------HHHH
Q 010640 300 MYQAQNLIEAGVDGLRVG-MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNS-----------GHIV 367 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~-~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~-----------~di~ 367 (505)
.+.|+.+.+.|+|.+.+. ..+..... ...+ ..+..+.+.++...+||+..|||++. .++.
T Consensus 283 ~~~A~~~~~~Ga~~l~~~dl~~~~~~~------~~~~--~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~ 354 (555)
T 1jvn_A 283 VQLAQKYYQQGADEVTFLNITSFRDCP------LKDT--PMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVAS 354 (555)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC---CCC------GGGC--HHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCCcccccc------CCCc--hHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHH
Confidence 356788888999988663 21110000 0011 12333445555678999999999998 4499
Q ss_pred HHHHhCCCEEEeccccc
Q 010640 368 KALVLGASTVMMGSFLA 384 (505)
Q Consensus 368 kal~lGA~~V~~G~~f~ 384 (505)
+.+.+||+.|.+|+...
T Consensus 355 ~~l~aGad~V~igt~~~ 371 (555)
T 1jvn_A 355 LYFRSGADKVSIGTDAV 371 (555)
T ss_dssp HHHHHTCSEEEECHHHH
T ss_pred HHHHcCCCEEEECCHHh
Confidence 99999999999998753
No 349
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.43 E-value=1.1 Score=44.64 Aligned_cols=114 Identities=17% Similarity=0.189 Sum_probs=76.4
Q ss_pred ccHHHHHHHHHHcCccEEEEeC--------C----C----------------CCchhHHHHHHHHHHhCCCceEEEcccC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDS--------S----Q----------------GNSSFQIEMIKYAKKTYPELDVIGGNVV 298 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~--------~----~----------------g~~~~~~~~i~~l~~~~~~~~Vi~g~V~ 298 (505)
+...+.++.+.++|+|++-++. . . +.+......++..++.. +++++. ++.
T Consensus 35 e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~-Gi~~~s-t~~ 112 (349)
T 2wqp_A 35 KTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK-GMIFIS-TLF 112 (349)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT-TCEEEE-EEC
T ss_pred HHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh-CCeEEE-eeC
Confidence 3456667778889999998852 1 1 12223344444445454 677765 899
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHH----HhCC
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKAL----VLGA 374 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal----~lGA 374 (505)
+.+.+..+.+.|+|++.++. ++..+ +..|.. +.+.+.|||.+=|..|-.++..|. ..|.
T Consensus 113 d~~svd~l~~~~v~~~KI~S--------~~~~n-----~~LL~~----va~~gkPviLstGmat~~Ei~~Ave~i~~~G~ 175 (349)
T 2wqp_A 113 SRAAALRLQRMDIPAYKIGS--------GECNN-----YPLIKL----VASFGKPIILSTGMNSIESIKKSVEIIREAGV 175 (349)
T ss_dssp SHHHHHHHHHHTCSCEEECG--------GGTTC-----HHHHHH----HHTTCSCEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhcCCCEEEECc--------ccccC-----HHHHHH----HHhcCCeEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999963 22222 222322 234689999999999999998876 3566
Q ss_pred CEEEe
Q 010640 375 STVMM 379 (505)
Q Consensus 375 ~~V~~ 379 (505)
+.+.+
T Consensus 176 ~iiLl 180 (349)
T 2wqp_A 176 PYALL 180 (349)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 54444
No 350
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.41 E-value=0.37 Score=44.58 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=68.5
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhH---HHHHHHHHH---hCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQ---IEMIKYAKK---TYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGS 322 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~---~~~i~~l~~---~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~ 322 (505)
..+.++.+.+.|++++.+....+..... .+.++.+++ .+ ++++++- +.+..+.++|+|++.++..
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~-~v~v~v~-----~~~~~a~~~gad~v~l~~~--- 103 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREA-GVPFIVN-----DDVELALNLKADGIHIGQE--- 103 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHH-TCCEEEE-----SCHHHHHHHTCSEEEECTT---
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHc-CCeEEEc-----CHHHHHHHcCCCEEEECCC---
Confidence 6678889999999999987544433333 444444443 22 5777763 2345677899999966310
Q ss_pred eeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 323 ICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 323 ~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
. +. +.++++ ..+. ++..-.+.+..++.++...|||.+.+|..|-
T Consensus 104 ----------~-~~---~~~~~~---~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~ 147 (227)
T 2tps_A 104 ----------D-AN---AKEVRA---AIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYP 147 (227)
T ss_dssp ----------S-SC---HHHHHH---HHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSC
T ss_pred ----------c-cC---HHHHHH---hcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcC
Confidence 0 11 222222 2233 3331124789999999999999999987663
No 351
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=93.40 E-value=0.45 Score=47.44 Aligned_cols=223 Identities=14% Similarity=0.128 Sum_probs=121.3
Q ss_pred CCcccceeecCCC-CCCCCCCeeeeeeecCcccccceEEEccchhhh-------HHHHHHHHHHcCCeeEEcCCCCH--H
Q 010640 23 SYTYDDVIFLPHY-IDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVT-------EDYMAAAMAALGGIGIVHSNCTA--A 92 (505)
Q Consensus 23 ~~~~~d~~l~p~~-~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~vt-------~~~ma~al~~~Gg~g~i~~~~~~--~ 92 (505)
...|+++.|+|.. +++..+++++.+++. +.++..|++.|||..++ +..++.+..+.| +++....++. +
T Consensus 22 ~~~f~~~~l~p~~l~~~~~~~~d~~~~i~-g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G-~~~~~~~~~~~l~ 99 (349)
T 1p0k_A 22 ETGLDDITFVHVSLPDLALEQVDISTKIG-ELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAG-IPLAVGSQMSALK 99 (349)
T ss_dssp CCSGGGEEECCCSCCCCCGGGCBCCEEET-TEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHT-CCEECCCCTTTTT
T ss_pred cCccceEEEEccccCCCCcccCCceeEEC-CcccCCceEEcCccccchhhhhHHHHHHHHHHHHcC-CcEEeccchhccc
Confidence 5679999999986 445557789999987 78899999999996555 445666655555 5544333211 1
Q ss_pred H--HHHHHHhhhccCCccccCCCeeEeCCCCCHHHHHHHhcC-Ce-EEEEeCCCCCCeEEEEEecccccccccccccccc
Q 010640 93 D--QARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGS-NY-VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFD 168 (505)
Q Consensus 93 ~--~~~~v~~v~~~~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~-~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~ 168 (505)
+ ....++.++... ...|....+..+.+..+..+.+.. +. ...++- . . ..+
T Consensus 100 ~~~~~~~~~~~~~~~---~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~--------------------~--~-~~~ 153 (349)
T 1p0k_A 100 DPSERLSYEIVRKEN---PNGLIFANLGSEATAAQAKEAVEMIGANALQIHL--------------------N--V-IQE 153 (349)
T ss_dssp CHHHHHHHHHHHHHC---SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEE--------------------C--T-TTT
T ss_pred CcccccceehhhhhC---CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecc--------------------c--c-hhh
Confidence 1 111122122111 013411234434455555554443 33 222210 0 0 000
Q ss_pred ccccCCCceEecCCC-CHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCc
Q 010640 169 YMRDCSSNVSVPANY-DLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRE 247 (505)
Q Consensus 169 im~~~~~~~~v~~~~-~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~ 247 (505)
...+ ...++. ...+.++.+.+. . .+||+ .......
T Consensus 154 ~~~~-----~~~~~~~~~~~~i~~vr~~-~-~~Pv~-------------------------------------vK~~~~~ 189 (349)
T 1p0k_A 154 IVMP-----EGDRSFSGALKRIEQICSR-V-SVPVI-------------------------------------VKEVGFG 189 (349)
T ss_dssp C-------------CTTHHHHHHHHHHH-C-SSCEE-------------------------------------EEEESSC
T ss_pred hcCC-----CCCcchHHHHHHHHHHHHH-c-CCCEE-------------------------------------EEecCCC
Confidence 1110 001111 144555555432 1 23432 1110010
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCC--------------------CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQG--------------------NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNL 306 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g--------------------~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l 306 (505)
...+.+..+.++|+|.|.+....| ......+.+..+++..+++||++ |++.+.+++.++
T Consensus 190 ~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~ 269 (349)
T 1p0k_A 190 MSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKA 269 (349)
T ss_dssp CCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHH
Confidence 124667888899999998853211 11234556777777655789877 899999999999
Q ss_pred HHcCCCEEEEc
Q 010640 307 IEAGVDGLRVG 317 (505)
Q Consensus 307 ~~aGad~I~v~ 317 (505)
+.+|||++.++
T Consensus 270 l~~GAd~V~iG 280 (349)
T 1p0k_A 270 IALGASCTGMA 280 (349)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEc
Confidence 99999999875
No 352
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=93.36 E-value=0.88 Score=45.79 Aligned_cols=119 Identities=15% Similarity=0.179 Sum_probs=82.4
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCC------CchhHHHHHHHHHHhC-CCceEEEcc--cCCHHHH----HHHHHcCCC
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQG------NSSFQIEMIKYAKKTY-PELDVIGGN--VVTMYQA----QNLIEAGVD 312 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g------~~~~~~~~i~~l~~~~-~~~~Vi~g~--V~t~e~a----~~l~~aGad 312 (505)
+++..+.++.+.++|.+.+-++..++ ......+.++.+|+.+ +++++++.. --+.+++ +.+.+.|++
T Consensus 150 ~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 229 (382)
T 1rvk_A 150 PEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFD 229 (382)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 34466777778888999999987654 3456778888898877 578888731 1255554 445567888
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCC-HHHHHHHHHhC-CCEEEecc
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN-SGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~-~~di~kal~lG-A~~V~~G~ 381 (505)
.|.-.. . ......+..+ .+..++||++++.+.+ ..++.+++..| +|+|++-.
T Consensus 230 ~iE~P~-----------~---~~~~~~~~~l---~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~ 283 (382)
T 1rvk_A 230 WIEEPM-----------D---EQSLSSYKWL---SDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGV 283 (382)
T ss_dssp EEECCS-----------C---TTCHHHHHHH---HHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECH
T ss_pred EEeCCC-----------C---hhhHHHHHHH---HhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCc
Confidence 774221 0 0123333333 3446799999999999 99999999988 78988753
No 353
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=93.36 E-value=0.18 Score=61.49 Aligned_cols=101 Identities=11% Similarity=0.157 Sum_probs=74.0
Q ss_pred eEecCCC-CHHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHH
Q 010640 177 VSVPANY-DLGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEH 255 (505)
Q Consensus 177 ~~v~~~~-~l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~ 255 (505)
+++..+. +.+++.+++.+.++..++++. ...+..+.+..
T Consensus 672 v~~~~G~p~~e~~~~~l~~~gi~~i~~v~----------------------------------------~~~~a~~~v~~ 711 (2060)
T 2uva_G 672 LTIGAGVPSIEVANEYIQTLGIRHISFKP----------------------------------------GSVDAIQQVIN 711 (2060)
T ss_dssp EEEESSCCCHHHHHHHHHHSCCSEEEECC----------------------------------------CSHHHHHHHHH
T ss_pred EeecCCCCCHHHHHHHHHHcCCeEEEecC----------------------------------------CHHHHHHHHHH
Confidence 3334444 456789999999988777652 12234555567
Q ss_pred HHHcCccEEE---EeC--CCCC-c-----hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHH-----------HcCCC
Q 010640 256 LVKAGVNVVV---LDS--SQGN-S-----SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLI-----------EAGVD 312 (505)
Q Consensus 256 lieaGad~I~---i~~--~~g~-~-----~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~-----------~aGad 312 (505)
+.++|+|+++ +.. +.|| + ...+..+..+++.+ ++||++ |++.+.+++..++ .+|||
T Consensus 712 l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~-~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAd 790 (2060)
T 2uva_G 712 IAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS-NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFD 790 (2060)
T ss_dssp HHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST-TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCS
T ss_pred HHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCC
Confidence 7899999988 543 2233 2 45678889998887 788876 8999999999999 99999
Q ss_pred EEEEcc
Q 010640 313 GLRVGM 318 (505)
Q Consensus 313 ~I~v~~ 318 (505)
++.+|.
T Consensus 791 gV~~GT 796 (2060)
T 2uva_G 791 GCMFGS 796 (2060)
T ss_dssp CEEESG
T ss_pred EEEEch
Confidence 999873
No 354
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=93.32 E-value=0.82 Score=46.30 Aligned_cols=118 Identities=9% Similarity=0.043 Sum_probs=81.7
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEcc
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGM 318 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~ 318 (505)
.++..+.+..+.++|.+.+-+....+.....++.++.+|+.+ ++.++.+. .--+.+++ +.+.+.|++.|.-..
T Consensus 163 ~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~ 242 (393)
T 2og9_A 163 IDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEEPL 242 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCC
Confidence 344667777888899999998776544456788889999886 57888773 12255555 444556888774211
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. ......+. +..+..++||++++.+.+..++.+++..| +|+|++-
T Consensus 243 -----------~---~~~~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 243 -----------D---AYDHEGHA---ALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp -----------C---TTCHHHHH---HHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred -----------C---cccHHHHH---HHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 0 01233333 33345679999999999999999999988 8888874
No 355
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.31 E-value=0.65 Score=44.49 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=64.0
Q ss_pred HHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEE
Q 010640 277 IEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVI 355 (505)
Q Consensus 277 ~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvI 355 (505)
+..++.+++. +-++..-++-+.-.|+.+.++|+|+|-++-..+....+..-. ..++.-..+..++..++.. +.||+
T Consensus 18 ~~~lr~~~~~--g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vtldem~~h~~aV~r~~~~~~vv 94 (275)
T 3vav_A 18 VPKLQAMREA--GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTT-LPVTLDDIAYHTACVARAQPRALIV 94 (275)
T ss_dssp HHHHHHHHHH--TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHTCCSSEEE
T ss_pred HHHHHHHHHC--CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCC-CccCHHHHHHHHHHHHhcCCCCCEE
Confidence 4445555555 456656688999999999999999997753222222221111 1123333444456666665 38999
Q ss_pred ec---CCCCCHHHHH----HHHHhCCCEEEec
Q 010640 356 AD---GGISNSGHIV----KALVLGASTVMMG 380 (505)
Q Consensus 356 a~---GGI~~~~di~----kal~lGA~~V~~G 380 (505)
+| ||-.++.+++ +.+..||++|.+=
T Consensus 95 aD~pfgsY~s~~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 95 ADLPFGTYGTPADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp EECCTTSCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EecCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 99 4567888864 5677899999763
No 356
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=93.22 E-value=0.21 Score=50.25 Aligned_cols=68 Identities=10% Similarity=0.164 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhCC-CceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.++.+.++|+|+|.+....|. ....++.+..+++..+ ++||++ |++.+.+++.+++.+|||++.++
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 46678889999999999543221 1345677888877654 588877 89999999999999999999775
No 357
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.16 E-value=1.1 Score=45.19 Aligned_cols=117 Identities=10% Similarity=0.051 Sum_probs=80.7
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHH----HHcCCCEEEEc
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNL----IEAGVDGLRVG 317 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l----~~aGad~I~v~ 317 (505)
.++...+.++.+.++|.+.+-++..+ ......+.++.+|+.+ ++.++.+. .--+.+++..+ .+.|+ .|.-
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE~- 221 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILEQ- 221 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEEC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEeC-
Confidence 45557777888889999999987654 2345678888899888 47888773 12366665443 33566 5521
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
. .+....+ ++..+..++||++++.+.+..++.+++..| +|+|++...
T Consensus 222 ----------P-----~~~~~~~---~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~ 269 (379)
T 2rdx_A 222 ----------P-----CRSYEEC---QQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKIS 269 (379)
T ss_dssp ----------C-----SSSHHHH---HHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETT
T ss_pred ----------C-----cCCHHHH---HHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecc
Confidence 0 1123333 344455689999999999999999999987 899988543
No 358
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=93.12 E-value=0.32 Score=48.14 Aligned_cols=68 Identities=21% Similarity=0.240 Sum_probs=52.3
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----------------------chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHH
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----------------------SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNL 306 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----------------------~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l 306 (505)
.+.+..+.++|+|+|.+....|. ....++.+..+++..+++||++ |++.+.+++.++
T Consensus 195 ~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~ka 274 (332)
T 1vcf_A 195 REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKA 274 (332)
T ss_dssp HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHH
Confidence 45577888999999998543221 1234667777888765688877 899999999999
Q ss_pred HHcCCCEEEEc
Q 010640 307 IEAGVDGLRVG 317 (505)
Q Consensus 307 ~~aGad~I~v~ 317 (505)
+.+|||++.++
T Consensus 275 l~~GAd~V~ig 285 (332)
T 1vcf_A 275 LALGADLLAVA 285 (332)
T ss_dssp HHHTCSEEEEC
T ss_pred HHhCCChHhhh
Confidence 99999999775
No 359
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=93.11 E-value=0.35 Score=48.04 Aligned_cols=69 Identities=13% Similarity=0.246 Sum_probs=53.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC--C-----CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ--G-----NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~--g-----~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
+..+.++.+.+.|+|++.++... . .....++.++.+++.+ ++||++ |++.+.+++..+++.| +|+|.++
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 45677888889999999986531 0 1112467888888887 789887 6778999999999998 9999775
No 360
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=92.99 E-value=1.2 Score=44.48 Aligned_cols=119 Identities=18% Similarity=0.156 Sum_probs=82.1
Q ss_pred CCccHHHHHHHHHH-cCccEEEEeCCCCCchhHHHHHHHHHHhCC-CceEEEc-c-cCCHHHH----HHHHHcCCCEEEE
Q 010640 245 TRESDKERLEHLVK-AGVNVVVLDSSQGNSSFQIEMIKYAKKTYP-ELDVIGG-N-VVTMYQA----QNLIEAGVDGLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~lie-aGad~I~i~~~~g~~~~~~~~i~~l~~~~~-~~~Vi~g-~-V~t~e~a----~~l~~aGad~I~v 316 (505)
.++...+.+..+.+ +|.+.+-+...++.....++.++.+|+.++ +.++.+. + --+.+++ +.+.+.|++.|.-
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq 221 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQ 221 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEeC
Confidence 34456667777888 999999988765544556788888888763 6777773 1 1255544 5566788888742
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. +. ......+..+ .+..++||++++.+.+..++.+++..| +|.|++-
T Consensus 222 P-----------~~---~~~~~~~~~l---~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (370)
T 1nu5_A 222 P-----------VP---RANFGALRRL---TEQNGVAILADESLSSLSSAFELARDHAVDAFSLK 269 (370)
T ss_dssp C-----------SC---TTCHHHHHHH---HHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred C-----------CC---cccHHHHHHH---HHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEc
Confidence 1 10 1123333333 344679999999999999999999988 8888885
No 361
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=92.91 E-value=0.41 Score=47.74 Aligned_cols=69 Identities=25% Similarity=0.285 Sum_probs=52.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCC-C-C------CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSS-Q-G------NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~-~-g------~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
+..+.++.+.+.|+|++.+... . . .....++.++.+++.+ ++||++ |.+.+.+++..+++.| +|+|.++
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEEec
Confidence 4566788888899999998741 1 1 1123567788888876 789877 6678999999999999 9999775
No 362
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=92.90 E-value=1 Score=42.73 Aligned_cols=67 Identities=22% Similarity=0.274 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCccEEEEeCCC---C----CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQ---G----NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~---g----~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.++++.+.+.+.+++.+.+.. | ......+.++.+++.. ++||++ |++.+.+.+..+.++|+|++.|+
T Consensus 156 ~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 156 EDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 355555555555555443221 2 1234667888888876 788877 57778999999999999999886
No 363
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=92.89 E-value=0.47 Score=47.72 Aligned_cols=68 Identities=18% Similarity=0.199 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC---------------------------chhHHHHHHHHHHhCCCceEEE-cccCCHH
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN---------------------------SSFQIEMIKYAKKTYPELDVIG-GNVVTMY 301 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~---------------------------~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e 301 (505)
.+.++.+.++|+|+|.+....|. .......+.++++..+++||++ |++.+..
T Consensus 201 ~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~ 280 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGL 280 (368)
T ss_dssp HHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCHH
Confidence 46788899999999998654441 0112234566777766689887 8999999
Q ss_pred HHHHHHHcCCCEEEEc
Q 010640 302 QAQNLIEAGVDGLRVG 317 (505)
Q Consensus 302 ~a~~l~~aGad~I~v~ 317 (505)
++.+++.+|||++.++
T Consensus 281 d~~kal~lGA~~v~ig 296 (368)
T 3vkj_A 281 DAAKAIALGADIAGMA 296 (368)
T ss_dssp HHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEc
Confidence 9999999999999775
No 364
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.78 E-value=0.48 Score=46.30 Aligned_cols=69 Identities=20% Similarity=0.177 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCccEEEEeCCC----------------------CCc-----hhHHHHHHHHHHhCC-CceEEE-cccCC
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ----------------------GNS-----SFQIEMIKYAKKTYP-ELDVIG-GNVVT 299 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~----------------------g~~-----~~~~~~i~~l~~~~~-~~~Vi~-g~V~t 299 (505)
..+.++.+.++|+|.+.++... |.+ ...++.++.+++..+ ++||++ |++.+
T Consensus 174 ~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~ 253 (311)
T 1jub_A 174 FDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIET 253 (311)
T ss_dssp HHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCS
T ss_pred HHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 3445778888899999875431 100 123678888888764 789876 89999
Q ss_pred HHHHHHHHHcCCCEEEEc
Q 010640 300 MYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~ 317 (505)
.+++.+++.+|||++.++
T Consensus 254 ~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 254 GQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 999999999999999875
No 365
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.75 E-value=0.96 Score=45.45 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=71.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC-----------------------------CCchhHHHHHHHHHHhCCCceEEEcccC
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ-----------------------------GNSSFQIEMIKYAKKTYPELDVIGGNVV 298 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~-----------------------------g~~~~~~~~i~~l~~~~~~~~Vi~g~V~ 298 (505)
...+.++.+.++|+|++-++... +.+......++..++.. +++++. ++.
T Consensus 45 ~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~-Gi~~~s-tpf 122 (385)
T 1vli_A 45 QAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREK-QVIFLS-TVC 122 (385)
T ss_dssp HHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHT-TCEEEC-BCC
T ss_pred HHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHc-CCcEEE-ccC
Confidence 35666777888999999875310 12233445555555554 667654 899
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHH
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALV 371 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~ 371 (505)
+.+.+..+.+.|+|++.++. ++..+ +..|.. +.+.+.|||.+=|..|-.++..|..
T Consensus 123 D~~svd~l~~~~vd~~KIgS--------~~~~N-----~pLL~~----va~~gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 123 DEGSADLLQSTSPSAFKIAS--------YEINH-----LPLLKY----VARLNRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp SHHHHHHHHTTCCSCEEECG--------GGTTC-----HHHHHH----HHTTCSCEEEECTTCCHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCEEEECc--------ccccC-----HHHHHH----HHhcCCeEEEECCCCCHHHHHHHHH
Confidence 99999999999999999963 22222 222322 2346899999999999999988873
No 366
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=92.73 E-value=0.29 Score=49.72 Aligned_cols=68 Identities=16% Similarity=0.249 Sum_probs=53.0
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhCC-CceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.++.+.++|+|+|.+....|. ....++.+..+++... ++||++ |++.+.+++.+++.+|||++.++
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 46688899999999999543321 1345677777777653 589887 89999999999999999999775
No 367
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=92.71 E-value=1.7 Score=43.87 Aligned_cols=116 Identities=9% Similarity=0.016 Sum_probs=79.4
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc-c-cCCHHHH----HHHHH--cCCCEEEEc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG-N-VVTMYQA----QNLIE--AGVDGLRVG 317 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g-~-V~t~e~a----~~l~~--aGad~I~v~ 317 (505)
++..+.+..+.+.|.+.+-+...++.....++.++.+|+.+ +++++.+. + --+.+++ +.+.+ .+++.|.-.
T Consensus 147 ~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP 226 (389)
T 2oz8_A 147 DAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDP 226 (389)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESC
T ss_pred HHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCC
Confidence 44566777788899999998876544456678899999987 57888773 1 1255544 45566 566655211
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhc-CCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQS-GVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
+. ......+. +..+.. ++||++++.+ +..++.+++..| +|+|++.
T Consensus 227 -----------~~---~~~~~~~~---~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 227 -----------IL---RHDHDGLR---TLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp -----------BC---TTCHHHHH---HHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred -----------CC---CcCHHHHH---HHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 10 01233333 333456 7999999999 999999999988 8999995
No 368
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=92.64 E-value=0.45 Score=46.32 Aligned_cols=69 Identities=19% Similarity=0.324 Sum_probs=51.9
Q ss_pred cHHHHHHHHHHcCccEEEEeCC---------C----------CCc-h----hHHHHHHHHHHhCCCceEEE-cccCCHHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSS---------Q----------GNS-S----FQIEMIKYAKKTYPELDVIG-GNVVTMYQ 302 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~---------~----------g~~-~----~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~ 302 (505)
+..+.++.+.++|+|.+.+... . +.+ . ..++.++.+++.+ ++||++ |++.+.++
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~~d 255 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQD 255 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEEECCcCCHHH
Confidence 3457788899999999988320 0 011 0 1257788888876 789887 78889999
Q ss_pred HHHHHHcCCCEEEEc
Q 010640 303 AQNLIEAGVDGLRVG 317 (505)
Q Consensus 303 a~~l~~aGad~I~v~ 317 (505)
+.+++++|||++.++
T Consensus 256 ~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 256 VLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEEC
Confidence 999999999999876
No 369
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.63 E-value=0.31 Score=48.26 Aligned_cols=180 Identities=19% Similarity=0.243 Sum_probs=115.2
Q ss_pred eeecCcccccceEEEccchhhhHHHHHHHHHHcCCeeEEc-CCCCHHHHHHHHHhhhccCCccccCCCeeEeCC-CCCHH
Q 010640 47 TRLTRNIDLSLPCVASPMDTVTEDYMAAAMAALGGIGIVH-SNCTAADQARLVVSAKSRRVPIFSSSLDVFKAP-DGCIN 124 (505)
Q Consensus 47 ~~lt~~~~l~~Pli~a~m~~vt~~~ma~al~~~Gg~g~i~-~~~~~~~~~~~v~~v~~~~~~~~~~p~~~~v~~-~~tv~ 124 (505)
|+|+..+.++.|+|++||.+++..+++.++++.|++|++. ...+++...+.++++++..+ .|..+.+-- +....
T Consensus 3 t~~~~~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~----~p~gvnl~~~~~~~~ 78 (332)
T 2z6i_A 3 TRITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTD----KPFGVNIMLLSPFVE 78 (332)
T ss_dssp CHHHHHHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCC----SCEEEEECTTSTTHH
T ss_pred ChhhHHhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcC----CCEEEEecCCCCCHH
Confidence 5677778899999999999999999999999999999884 45577776666766655332 341122221 22344
Q ss_pred HHHHHhcC-Ce-EEEEeCCCCCCeEEEEEeccccccccccccccccccccCCCceEecCCCCHHHHHHHHHHCCCCeeEE
Q 010640 125 DANDFDGS-NY-VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDYMRDCSSNVSVPANYDLGQIDEVLEKNDVDFVVL 202 (505)
Q Consensus 125 ~a~~~~~~-~~-~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~l~~~~i~~lpV 202 (505)
+.++...+ +. +..+. .+.+ .+.++.+++.+
T Consensus 79 ~~~~~a~~~g~d~V~~~-----------------------------------------~g~p-~~~i~~l~~~g------ 110 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTG-----------------------------------------AGNP-SKYMERFHEAG------ 110 (332)
T ss_dssp HHHHHHHHTTCSEEEEC-----------------------------------------SSCG-GGTHHHHHHTT------
T ss_pred HHHHHHHHCCCCEEEEC-----------------------------------------CCCh-HHHHHHHHHcC------
Confidence 44444433 33 21111 0000 11222233322
Q ss_pred eeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEeecCCccHHHHHHHHHHcCccEEEEeCC--CCC--chhHHH
Q 010640 203 EKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAAIGTRESDKERLEHLVKAGVNVVVLDSS--QGN--SSFQIE 278 (505)
Q Consensus 203 vd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~lieaGad~I~i~~~--~g~--~~~~~~ 278 (505)
+.+...+. ..+.++.+.+.|+|++.++.. .|+ ....++
T Consensus 111 ----------------------------------~~v~~~v~----~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ 152 (332)
T 2z6i_A 111 ----------------------------------IIVIPVVP----SVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMT 152 (332)
T ss_dssp ----------------------------------CEEEEEES----SHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHH
T ss_pred ----------------------------------CeEEEEeC----CHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHH
Confidence 12222332 235567788899999999753 222 134568
Q ss_pred HHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 279 MIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 279 ~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.++.+++.. ++||++ |++.+.+.+..++.+|+|++.++
T Consensus 153 ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 153 LVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp HHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEec
Confidence 888888876 788876 88889999999999999999886
No 370
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=92.52 E-value=0.67 Score=44.44 Aligned_cols=66 Identities=20% Similarity=0.219 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCC-CceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
...+......|..++-++.+. .....+.++.+++... ++|+++ |++.+.++++.+.++|||.|.++
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~--~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN--EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS--SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEcCCC--CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEC
Confidence 345555566788999888654 3345688888888864 688877 58899999999999999999886
No 371
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.49 E-value=0.73 Score=42.01 Aligned_cols=109 Identities=15% Similarity=0.201 Sum_probs=68.9
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHH---hCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCccee
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKK---TYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~---~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~ 324 (505)
+..+.++.+.+.|++++.+...........+.++.+++ .+ ++++++. +....+.++|+|++.++..
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~-~v~v~v~-----~~~~~a~~~gad~v~l~~~----- 95 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY-DALFFVD-----DRVDVALAVDADGVQLGPE----- 95 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT-TCEEEEE-----SCHHHHHHHTCSEEEECTT-----
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc-CCeEEEc-----ChHHHHHHcCCCEEEECCc-----
Confidence 46688889999999999886543333334555555544 33 6777763 3446677899999965311
Q ss_pred ecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 325 TTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 325 ~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
..+ .. ++++.. .++ +..-.+.+..++.++...|+|.+.+++.|
T Consensus 96 --------~~~-~~---~~~~~~--~~~--~~~v~~~t~~e~~~~~~~g~d~i~~~~~~ 138 (215)
T 1xi3_A 96 --------DMP-IE---VAKEIA--PNL--IIGASVYSLEEALEAEKKGADYLGAGSVF 138 (215)
T ss_dssp --------SCC-HH---HHHHHC--TTS--EEEEEESSHHHHHHHHHHTCSEEEEECSS
T ss_pred --------cCC-HH---HHHHhC--CCC--EEEEecCCHHHHHHHHhcCCCEEEEcCCc
Confidence 011 11 222221 122 32123689999999999999999998765
No 372
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.47 E-value=0.41 Score=46.85 Aligned_cols=69 Identities=23% Similarity=0.167 Sum_probs=52.5
Q ss_pred HHHHHHHHHHcC-ccEEEEeCCC----------------------CCc-----hhHHHHHHHHHHhCCCceEEE-cccCC
Q 010640 249 DKERLEHLVKAG-VNVVVLDSSQ----------------------GNS-----SFQIEMIKYAKKTYPELDVIG-GNVVT 299 (505)
Q Consensus 249 ~~e~~~~lieaG-ad~I~i~~~~----------------------g~~-----~~~~~~i~~l~~~~~~~~Vi~-g~V~t 299 (505)
..+.++.+.++| +|.+.++... |.+ ...++.++.+++..+++||++ |+|.+
T Consensus 176 ~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~ 255 (314)
T 2e6f_A 176 FDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYS 255 (314)
T ss_dssp HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 445577888999 9999875422 111 123678888888876799876 89999
Q ss_pred HHHHHHHHHcCCCEEEEc
Q 010640 300 MYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~ 317 (505)
.+++.+++.+|||++.++
T Consensus 256 ~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 256 GEDAFLHILAGASMVQVG 273 (314)
T ss_dssp HHHHHHHHHHTCSSEEEC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 999999999999999775
No 373
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=92.45 E-value=0.35 Score=48.20 Aligned_cols=68 Identities=22% Similarity=0.269 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhC-CCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTY-PELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~-~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.++.+.++|+|.|.++...|. ....++.+..+++.. .++||++ |++.+.+++.+++.+|||++.++
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 46688899999999999653331 124567777776654 3688877 89999999999999999999875
No 374
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=92.45 E-value=2.1 Score=39.66 Aligned_cols=123 Identities=18% Similarity=0.153 Sum_probs=85.8
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+...+.++.+.+....++ |-.+. ...-+..++.+.+. ++++-+.-+.|...+..+.++|++++. +..+
T Consensus 73 e~~i~eA~~l~~~~~nv~-IKIP~--T~eGl~A~~~L~~~--GI~vN~TliFS~~Qa~~aa~AGa~~iS-------pFVg 140 (223)
T 1wx0_A 73 EAMVAEGRRLAAIHPNIV-VKLPT--TEEGLKACKRLSAE--GIKVNMTLIFSANQALLAARAGASYVS-------PFLG 140 (223)
T ss_dssp HHHHHHHHHHHHHCTTEE-EEEES--SHHHHHHHHHHHHT--TCCEEEEEECSHHHHHHHHHTTCSEEE-------EBHH
T ss_pred HHHHHHHHHHHhhCCCEE-EEeCC--CHHHHHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHCCCeEEE-------eccc
Confidence 345566666766654433 32221 12335666667666 788877778899999999999999773 2333
Q ss_pred ccccccCcChHHHHHHHHHHHhhcC--CcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSG--VPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~--ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
| ...||.+....+.++.++.+.++ ..+++ -+++++.++..+..+|+|.+-+....
T Consensus 141 R-idd~g~~G~~~v~~i~~~~~~~~~~t~vl~-AS~r~~~~v~~~~l~G~d~~Tip~~~ 197 (223)
T 1wx0_A 141 R-VDDISWDGGELLREIVEMIQVQDLPVKVIA-ASIRHPRHVTEAALLGADIATMPHAV 197 (223)
T ss_dssp H-HHHTTSCHHHHHHHHHHHHHHTTCSCEEEE-BCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred h-HhhcCCCHHHHHHHHHHHHHHcCCCeEEee-cccCCHHHHHHHHHhCCCEEECCHHH
Confidence 3 45577788888888888877665 34555 48999999999999999998776544
No 375
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=92.44 E-value=2.4 Score=43.14 Aligned_cols=120 Identities=11% Similarity=0.005 Sum_probs=82.9
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCC------chhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCC
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGN------SSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVD 312 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~------~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad 312 (505)
++...+.++.+.+.|.+.+-+...++. ....++.++.+|+.+ ++.++++- .--+.++| +.+.+.|++
T Consensus 180 ~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~ 259 (412)
T 3stp_A 180 IEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPR 259 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 345667777888899999999875541 145678888889887 57888883 12355555 445567888
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
.|.-.. . ...+..+. +..+..++||++++.+.+..++.+++..| +|.|++-..
T Consensus 260 ~iEeP~-----------~---~~d~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~ 313 (412)
T 3stp_A 260 WLEEPV-----------I---ADDVAGYA---ELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTN 313 (412)
T ss_dssp EEECCS-----------C---TTCHHHHH---HHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred EEECCC-----------C---cccHHHHH---HHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChh
Confidence 884321 0 01233333 33445689999999999999999999987 788887543
No 376
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=92.40 E-value=0.65 Score=46.97 Aligned_cols=117 Identities=9% Similarity=0.026 Sum_probs=80.9
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEcc
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGM 318 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~ 318 (505)
.++..+.++.+.++|.+.+-++........ .+.++.+|+.+ ++.++.+. .--+.+++ +.+.+.|++.|.-.
T Consensus 165 ~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP- 242 (388)
T 2nql_A 165 LKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAEAP- 242 (388)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEECC-
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECC-
Confidence 445667777888899999998765433456 88899999877 57888773 11255554 44555788877321
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. .......+ ++..+..++||++++.+.+..++.+++..| +|+|++-
T Consensus 243 ----------~---~~~d~~~~---~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 243 ----------V---WTEDIAGL---EKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp ----------S---CTTCHHHH---HHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred ----------C---ChhhHHHH---HHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 1 01123333 344445689999999999999999999887 8888874
No 377
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=92.30 E-value=3.1 Score=41.79 Aligned_cols=121 Identities=12% Similarity=0.136 Sum_probs=82.6
Q ss_pred CCccHHHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhCC-CceEEEc--ccCCHHHH----HHHHHcCCCEEEE
Q 010640 245 TRESDKERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTYP-ELDVIGG--NVVTMYQA----QNLIEAGVDGLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~~-~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v 316 (505)
.++...+.++.+++. |...+-+..........++.++.+|+.++ +.++++- .--+.++| +.+.+.|++.|.-
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq 227 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFEQ 227 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEES
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC
Confidence 344456666777777 99998887654345667888999999884 6788773 11255554 5566789888842
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
. +. ......+..+ .+..++||.+++.+.+..|+.+++..| +|.|++-..
T Consensus 228 P-----------~~---~~d~~~~~~l---~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 277 (383)
T 3i4k_A 228 P-----------TP---ADDLETLREI---TRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTT 277 (383)
T ss_dssp C-----------SC---TTCHHHHHHH---HHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTT
T ss_pred C-----------CC---hhhHHHHHHH---HhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEccc
Confidence 1 10 0123333333 334579999999999999999999988 788888643
No 378
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.28 E-value=0.92 Score=43.96 Aligned_cols=109 Identities=18% Similarity=0.184 Sum_probs=72.1
Q ss_pred HHHHHHHHHcCccEEEEeC--------CCCC-chhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEccC
Q 010640 250 KERLEHLVKAGVNVVVLDS--------SQGN-SSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVGMG 319 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~--------~~g~-~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~~g 319 (505)
.+.++.+.++|++.+.+.. ..|. .....+.++.+++.+ ++|++++ ...+.+.++.+.++|+|++.....
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad~v~~~~~ 109 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVDFIDESEV 109 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCCEEeeeCC
Confidence 5788889999999997621 0110 112356777888776 7888763 456789999999999999932110
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHh--hcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAA--QSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~--~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
... +. +.+.++ ..++++++ ++.++.+..++..+||+.|.+
T Consensus 110 ---~~~---------~~------~~~~~~~~~~~i~l~~--~v~~~~~~~~a~~~Gad~I~v 151 (297)
T 2zbt_A 110 ---LTP---------AD------EEHHIDKWKFKVPFVC--GARNLGEALRRIAEGAAMIRT 151 (297)
T ss_dssp ---SCC---------SC------SSCCCCGGGCSSCEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred ---CCh---------HH------HHHHHHHhCCCceEEe--ecCCHHHHHHHHHcCCCEEEE
Confidence 000 00 001111 12678887 589999999999999999844
No 379
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=92.28 E-value=2.6 Score=42.65 Aligned_cols=118 Identities=11% Similarity=0.038 Sum_probs=81.7
Q ss_pred ccHHHHH-HHHHHcCccEEEEeCCCC------CchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCC
Q 010640 247 ESDKERL-EHLVKAGVNVVVLDSSQG------NSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVD 312 (505)
Q Consensus 247 ~~~~e~~-~~lieaGad~I~i~~~~g------~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad 312 (505)
++..+.+ +.+.+.|...+-+..... .....++.++.+|+.+ ++.++++- .--+.++| +.+.+.|++
T Consensus 141 e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 220 (393)
T 4dwd_A 141 DEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYS 220 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCC
Confidence 4455666 777888999988866432 3456788888999987 57888773 12255554 556678888
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecc
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGS 381 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~ 381 (505)
.|.-.. . ......+. +..+..++||.+++.+.+..|+.+++..|+|.|++--
T Consensus 221 ~iEqP~-----------~---~~d~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 221 WFEEPV-----------Q---HYHVGAMG---EVAQRLDITVSAGEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp EEECCS-----------C---TTCHHHHH---HHHHHCSSEEEBCTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred EEECCC-----------C---cccHHHHH---HHHhhCCCCEEecCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 884211 0 01233333 3344568999999999999999999999999998753
No 380
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.14 E-value=0.43 Score=48.06 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhCC-CceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTYP-ELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.++.+.++|+|.|.+....|. ....++.+..+++..+ ++||++ |+|.+.+++.+++.+|+|++.++
T Consensus 236 ~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 236 AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIG 309 (370)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeec
Confidence 46778889999999999432221 1246777888888764 688877 89999999999999999999775
No 381
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=91.99 E-value=2.1 Score=39.82 Aligned_cols=123 Identities=18% Similarity=0.149 Sum_probs=85.2
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeec
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTT 326 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~ 326 (505)
+...+.++.+.+....+ .|-.+. ...-+..++.+.+. ++++-+.-+.|...|..+.++|++++. +..+
T Consensus 76 e~mi~eA~~L~~~~~nv-~IKIP~--T~eGl~Ai~~L~~e--GI~vNvTliFS~~QA~laa~AGa~~iS-------pFVg 143 (230)
T 1vpx_A 76 EGMVREARELAQISEYV-VIKIPM--TPDGIKAVKTLSAE--GIKTNVTLVFSPAQAILAAKAGATYVS-------PFVG 143 (230)
T ss_dssp HHHHHHHHHHHTTCTTE-EEEEES--SHHHHHHHHHHHHT--TCCEEEEEECSHHHHHHHHHHTCSEEE-------EBHH
T ss_pred HHHHHHHHHHHHhCCCE-EEEeCC--CHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHhCCCeEEE-------eccc
Confidence 34556666776665443 332221 12335666777666 788877778899999999999999773 2333
Q ss_pred ccccccCcChHHHHHHHHHHHhhcC--CcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 327 QEVCAVGRGQATAVYKVSSIAAQSG--VPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 327 ~~~~g~g~p~~~~l~~v~~~~~~~~--ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
| ...||.+....+.++.++.+.++ ..++++ +++++.++..+..+||+.+-+....
T Consensus 144 R-idd~g~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~~~~v~~~~l~G~d~~Tip~~~ 200 (230)
T 1vpx_A 144 R-MDDLSNDGMRMLGEIVEIYNNYGFETEIIAA-SIRHPMHVVEAALMGVDIVTMPFAV 200 (230)
T ss_dssp H-HHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-SCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred h-hhhccccHHHHHHHHHHHHHHcCCCeEEEee-ccCCHHHHHHHHHhCCCEEECCHHH
Confidence 3 45577777888888887776554 446664 6999999999999999987766443
No 382
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=91.97 E-value=0.36 Score=44.97 Aligned_cols=67 Identities=21% Similarity=0.333 Sum_probs=47.6
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEE-cccCCHHHHHHHHHcCCCEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIG-GNVVTMYQAQNLIEAGVDGL 314 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~-g~V~t~e~a~~l~~aGad~I 314 (505)
+..+.++.+.++|+|++...+........++.++.+++.. .++||++ |++.|.+++.+++++|+|.|
T Consensus 133 ~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 3556678888899999954331111112456677777654 2688866 89999999999999999976
No 383
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=91.89 E-value=0.73 Score=42.50 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=47.6
Q ss_pred HHHHHHHHcCccEEEEeCCCCC------chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 251 ERLEHLVKAGVNVVVLDSSQGN------SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~g~------~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
+.+..+.+.|+|++.+...++. ....++.++.+++.. ++|+++ |++ +.+.+..+.++|++++.++
T Consensus 121 ~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 121 EEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp HHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEEES
T ss_pred HHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEEEh
Confidence 4456677889999988653211 122467788887776 788866 777 8999999999999999886
No 384
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.88 E-value=0.98 Score=43.22 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCccEEEEeC---CCCC----chhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDS---SQGN----SSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~---~~g~----~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~ 317 (505)
..++++.+.+..-.++-+-+ ..|. .....+.++.+|+.. +.|+++| ++.++++++....+|+|+++||
T Consensus 160 ~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 160 DADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp CHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 34677777776655554422 2232 234678888888876 7899885 6778999998999999999986
No 385
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=91.81 E-value=2 Score=40.00 Aligned_cols=115 Identities=13% Similarity=0.133 Sum_probs=63.9
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE-cccCC-----------HHHHHHHHHcCCCEEEE
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG-GNVVT-----------MYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t-----------~e~a~~l~~aGad~I~v 316 (505)
....++.+.+.|+|.+.+|...|. ..+...++.+++. +..|.+ ....+ ..-++.+.++|++++++
T Consensus 80 v~~~~~~~~~~gad~vtvh~~~G~-~~l~~~~~~~~~~--g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~ 156 (228)
T 3m47_A 80 NEKICRATFKAGADAIIVHGFPGA-DSVRACLNVAEEM--GREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVG 156 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTCH-HHHHHHHHHHHHH--TCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHhCCCCEEEEeccCCH-HHHHHHHHHHHhc--CCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 445778888999999999887663 2233445545444 222322 21111 12456677899998865
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCH-HHHHHHHHhCCCEEEecccccC
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNS-GHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~-~di~kal~lGA~~V~~G~~f~~ 385 (505)
+. ..+..+..+++.+.. +.++ .++||+-. .+. .++.+||+.+.+|+.+..
T Consensus 157 ~a----------------t~~~e~~~ir~~~~~-~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~ 207 (228)
T 3m47_A 157 PS----------------TRPERLSRLREIIGQ-DSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYL 207 (228)
T ss_dssp CS----------------SCHHHHHHHHHHHCS-SSEE-EECC----------CGGGTCSEEEECHHHHT
T ss_pred CC----------------CChHHHHHHHHhcCC-CCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhC
Confidence 41 012233444444321 2444 66787643 367 899999999999998753
No 386
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.79 E-value=0.53 Score=43.80 Aligned_cols=122 Identities=13% Similarity=0.081 Sum_probs=73.6
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCc----hhHHHHHHHHHHhCCCceEEEcc-cC-CHHHHHHHHHcCCCEEEEccCC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNS----SFQIEMIKYAKKTYPELDVIGGN-VV-TMYQAQNLIEAGVDGLRVGMGS 320 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~----~~~~~~i~~l~~~~~~~~Vi~g~-V~-t~e~a~~l~~aGad~I~v~~g~ 320 (505)
....+.++.+.+.|+|++.++...|+. ....+.++.+++.+ +.++.+.- +. ..+....+.++|+|++.+-.+.
T Consensus 19 ~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 19 ANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-KAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCC
Confidence 346678888889999999887543331 12247788888765 33333211 11 2334777788999999663110
Q ss_pred cceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHh---CCCEEEeccccc
Q 010640 321 GSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVL---GASTVMMGSFLA 384 (505)
Q Consensus 321 g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~l---GA~~V~~G~~f~ 384 (505)
. +. .+..+.+.+++.++.++.+=.-.++.+..+++.. |+|.|.+++.+-
T Consensus 98 ---------~----~~--~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~p 149 (228)
T 1h1y_A 98 ---------S----RD--NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEP 149 (228)
T ss_dssp ---------C----TT--THHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCT
T ss_pred ---------c----cc--HHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecC
Confidence 0 11 1112233344456666664444566666777766 999999988763
No 387
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=91.74 E-value=0.63 Score=46.68 Aligned_cols=216 Identities=13% Similarity=0.166 Sum_probs=118.0
Q ss_pred CcccceeecCCC-CCCCCCCeeeeeeecCcccccceEEEccchhh------hHHHHHHHHHHcCCeeEEcCCCCH--HH-
Q 010640 24 YTYDDVIFLPHY-IDFPIDAVSLSTRLTRNIDLSLPCVASPMDTV------TEDYMAAAMAALGGIGIVHSNCTA--AD- 93 (505)
Q Consensus 24 ~~~~d~~l~p~~-~~~~~~~~~~~~~lt~~~~l~~Pli~a~m~~v------t~~~ma~al~~~Gg~g~i~~~~~~--~~- 93 (505)
-.|||+.|+|.. |.+..+++|++++|. ++++..|++.++|... .+..++.+..+.|-.-.+ ..+.+ ++
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~-g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~v-Gs~~~~le~~ 131 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFA-GQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVT-GSYSTALKNP 131 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEET-TEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC-----------
T ss_pred CCcceEEEECCCCCcCCcccccceEEEC-CEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeec-ccccccccCc
Confidence 469999999986 455667899999998 7899999999999543 234566666666543222 22211 10
Q ss_pred HHHHHHhhhcc-CCccccCCCeeEeCCCCCHHHHHHHhcC-Ce--EEEEeCCCCCCeEEEEEeccccccccccccccccc
Q 010640 94 QARLVVSAKSR-RVPIFSSSLDVFKAPDGCINDANDFDGS-NY--VFVTESGTRRSRILGYVTKSDWENLSDNKVKIFDY 169 (505)
Q Consensus 94 ~~~~v~~v~~~-~~~~~~~p~~~~v~~~~tv~~a~~~~~~-~~--~pVvd~~~~~g~lvGivt~~Dl~~~~~~~~~v~~i 169 (505)
....+ .+.+. .+ .+...++..+.+++++.+.+.. +- +.+-=+ ++.++
T Consensus 132 ~~~~~-~v~r~~P~----~~~ianig~~~~~e~~~~~ve~~~adal~ihln------------------------~~qe~ 182 (365)
T 3sr7_A 132 DDTSY-QVKKSRPH----LLLATNIGLDKPYQAGLQAVRDLQPLFLQVHIN------------------------LMQEL 182 (365)
T ss_dssp ------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEEC------------------------HHHHH
T ss_pred cccce-EehhhCCC----CcEEEEeCCCCCHHHHHHHHHhcCCCEEEEecc------------------------ccccc
Confidence 00111 11111 11 1211346666777777776655 33 222110 12232
Q ss_pred cccCCCceEecCCCC---HHHHHHHHHHCCCCeeEEeeCCeeeeEEeechhhhhhcCCCCCCCccCCCCcceEEEe-ecC
Q 010640 170 MRDCSSNVSVPANYD---LGQIDEVLEKNDVDFVVLEKDGERLDVVTREDVERLKGYPNLGKGTVGPDGKWMVGAA-IGT 245 (505)
Q Consensus 170 m~~~~~~~~v~~~~~---l~~a~~~l~~~~i~~lpVvd~g~l~GiIt~~dil~~~~~~~~~~~~~d~~~~l~v~a~-i~~ 245 (505)
..+ .-+.+ ..+.++.+.+. ..+||+ +. ++
T Consensus 183 ~~p-------~Gd~~~~~~~~~I~~l~~~--~~~PVi-------------------------------------vK~vg- 215 (365)
T 3sr7_A 183 LMP-------EGEREFRSWKKHLSDYAKK--LQLPFI-------------------------------------LKEVG- 215 (365)
T ss_dssp TSS-------SSCCCCHHHHHHHHHHHHH--CCSCEE-------------------------------------EEECS-
T ss_pred cCC-------CCCCcHHHHHHHHHHHHHh--hCCCEE-------------------------------------EEECC-
Confidence 222 11111 23445555442 124443 12 11
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCc-------------------hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHH
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNS-------------------SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQN 305 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~-------------------~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~ 305 (505)
.....+.++.+.++|+|+|.++...|.. ......+..++...+++||++ |++.+..++.+
T Consensus 216 ~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~K 295 (365)
T 3sr7_A 216 FGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIK 295 (365)
T ss_dssp SCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHH
Confidence 1123467888999999999986543321 112234444444434688887 89999999999
Q ss_pred HHHcCCCEEEEc
Q 010640 306 LIEAGVDGLRVG 317 (505)
Q Consensus 306 l~~aGad~I~v~ 317 (505)
++.+|||++.++
T Consensus 296 aLalGAdaV~ig 307 (365)
T 3sr7_A 296 ALVLGAKAVGLS 307 (365)
T ss_dssp HHHHTCSEEEES
T ss_pred HHHcCCCEEEEC
Confidence 999999999775
No 388
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=91.70 E-value=1.6 Score=44.01 Aligned_cols=117 Identities=13% Similarity=0.095 Sum_probs=80.0
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHH----HHHHc-CCCEEEEcc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQ----NLIEA-GVDGLRVGM 318 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~----~l~~a-Gad~I~v~~ 318 (505)
+...+.+..+.++|.+.+-+...++.....++.++.+|+.+ ++.++++. .--+.+++. .+.+. |++.|.-.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iEqP- 219 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEEP- 219 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEECC-
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEECC-
Confidence 45667777788899999998876544466788899999887 57888773 123666653 34445 66655311
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
.. ......+ ++..+..++||++++.+.+..++.+++..| +|.|++-
T Consensus 220 ----------~~---~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 220 ----------LP---FDQPQDY---AMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp ----------SC---SSCHHHH---HHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred ----------CC---cccHHHH---HHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 10 0123333 344445689999999999999999999987 7888774
No 389
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=91.66 E-value=0.36 Score=45.35 Aligned_cols=126 Identities=13% Similarity=0.123 Sum_probs=75.0
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceE--EEc----ccC---CHHHHHHHHHcCCCEEEEc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDV--IGG----NVV---TMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~V--i~g----~V~---t~e~a~~l~~aGad~I~v~ 317 (505)
++..+.++.+.+.+...+++.. .++...+..-+.. ++.| ++| ... -..+++.+++.|||.|++-
T Consensus 43 ~~i~~lc~eA~~~~~~aVcV~p------~~v~~a~~~L~~s-~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmV 115 (239)
T 3ngj_A 43 EQIRKLCSEAAEYKFASVCVNP------TWVPLCAELLKGT-GVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMV 115 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEEECG------GGHHHHHHHHTTS-SCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhcCCcEEEECH------HHHHHHHHHhCCC-CCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEE
Confidence 3455666777778999998832 2333332222111 3333 222 111 2347888999999999875
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHH----HHhCCCEEEeccccc
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKA----LVLGASTVMMGSFLA 384 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~ka----l~lGA~~V~~G~~f~ 384 (505)
+.-|... ...|. -...-+..+.+.|...-+++|..-|..+...+.+| ..+|||+|--.|-|.
T Consensus 116 iNig~lk----~g~~~-~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 116 INIGMVK----AKKYD-DVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp CCHHHHH----TTCHH-HHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred eehHHhc----cccHH-HHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 3211100 01111 12334455555554333788888888999999998 889999999998774
No 390
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=91.58 E-value=0.47 Score=42.97 Aligned_cols=64 Identities=17% Similarity=0.192 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEcc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~~ 318 (505)
....++.+.+..+|++++- .|. +-+.++++++.. ++|+++| -+.+.+++..+.++||++|..+.
T Consensus 116 l~~~~~~i~~~~PD~iEiL--PGi---~p~iI~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsTs~ 180 (192)
T 3kts_A 116 YNKGVALIQKVQPDCIELL--PGI---IPEQVQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTTSN 180 (192)
T ss_dssp HHHHHHHHHHHCCSEEEEE--CTT---CHHHHHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEECC
T ss_pred HHHHHHHHhhcCCCEEEEC--Cch---hHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEeCC
Confidence 3445566666789999873 232 236777788876 8999996 55799999999999999997763
No 391
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=91.53 E-value=1.9 Score=43.74 Aligned_cols=118 Identities=9% Similarity=0.037 Sum_probs=80.7
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEcc
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGM 318 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~ 318 (505)
.++..+.+..+.++|.+.+-+....+......+.++.+|+.+ +++++.+. .--+.+++ +.+.+.|++.|.-..
T Consensus 176 ~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP~ 255 (398)
T 2pp0_A 176 LDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPL 255 (398)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEECCS
T ss_pred HHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeCCC
Confidence 344566777788899999988765444456788889999886 57888773 12355555 344456777763211
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. ......+..+ .+..++||++++.+.+..++.+++..| +|.|++-
T Consensus 256 -----------~---~~d~~~~~~l---~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 256 -----------D---AYDIEGHAQL---AAALDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp -----------C---TTCHHHHHHH---HHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred -----------C---hhhHHHHHHH---HhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 0 0123333333 344679999999999999999999988 7888774
No 392
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=91.50 E-value=2.5 Score=42.43 Aligned_cols=117 Identities=12% Similarity=0.052 Sum_probs=79.7
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEcc--cCCHHHHHHHHHc---CCCEEEEcc
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGGN--VVTMYQAQNLIEA---GVDGLRVGM 318 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g~--V~t~e~a~~l~~a---Gad~I~v~~ 318 (505)
.++...+.++.+.++|.+.+-+...++......+.++.+|+.+ ++.++.+.. --+.+++..+.+. |+ .|.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE--- 220 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE--- 220 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE---
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE---
Confidence 3444566777788889999998776544456788899999987 478887731 2366776554432 33 321
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
.. .+....+ ++..+..++||++++-+.+..++.+++..| +|+|++-.
T Consensus 221 --------qP-----~~d~~~~---~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 268 (378)
T 2qdd_A 221 --------QP-----CQTLDQC---AHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKP 268 (378)
T ss_dssp --------CC-----SSSHHHH---HHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred --------cC-----CCCHHHH---HHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecc
Confidence 11 1223333 344445689999999999999999999877 89998853
No 393
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=91.47 E-value=1.3 Score=44.82 Aligned_cols=118 Identities=8% Similarity=0.031 Sum_probs=80.2
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEcc
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGM 318 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~ 318 (505)
+++..+.+..+.++|.+.+-+..........++.++.+|+.+ ++.++.+. .--+.+++ +.+.+.|++.|.-..
T Consensus 150 ~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~ 229 (391)
T 2qgy_A 150 TNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEEPV 229 (391)
T ss_dssp HHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEECSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeCCC
Confidence 344667777788899999988653221255678888998876 57888773 12355554 445557888774211
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. ......+..+ .+..++||++++.+.+..++.+++..| +|+|++-
T Consensus 230 -----------~---~~d~~~~~~l---~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 230 -----------D---GENISLLTEI---KNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp -----------C---TTCHHHHHHH---HHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred -----------C---hhhHHHHHHH---HhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 0 0123333333 344679999999999999999999988 7888874
No 394
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=91.46 E-value=2.7 Score=41.89 Aligned_cols=120 Identities=15% Similarity=0.207 Sum_probs=81.0
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc-c-cCCHHHH----HHHHH--cCCCEEE
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG-N-VVTMYQA----QNLIE--AGVDGLR 315 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g-~-V~t~e~a----~~l~~--aGad~I~ 315 (505)
.+++..+.+..+.+.|.+.+-+...++.....++.++.+|+.+ +++++.+. + --+.+++ +.+.+ .|++.|.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE 219 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVE 219 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEE
Confidence 3445566777788889999988765534456778888899887 57888773 1 1255554 45556 6666663
Q ss_pred EccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 316 VGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
-. +. ......+..+ .+..++||++++.+.+..++.+++..| +|.|++-.
T Consensus 220 qP-----------~~---~~d~~~~~~l---~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 269 (366)
T 1tkk_A 220 QP-----------VH---KDDLAGLKKV---TDATDTPIMADESVFTPRQAFEVLQTRSADLINIKL 269 (366)
T ss_dssp CC-----------SC---TTCHHHHHHH---HHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred CC-----------CC---cccHHHHHHH---HhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeeh
Confidence 11 10 1123333333 344679999999999999999999877 88888853
No 395
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=91.41 E-value=2.3 Score=42.18 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=69.2
Q ss_pred cHHHHHHHHHHcCcc-----EEEEeCCC----------C--------------CchhHHHHHHHHHHhCCCceEEEcccC
Q 010640 248 SDKERLEHLVKAGVN-----VVVLDSSQ----------G--------------NSSFQIEMIKYAKKTYPELDVIGGNVV 298 (505)
Q Consensus 248 ~~~e~~~~lieaGad-----~I~i~~~~----------g--------------~~~~~~~~i~~l~~~~~~~~Vi~g~V~ 298 (505)
...+.++.+.++|+| ++-++.-. + .+......++..++.. +++++. ++.
T Consensus 22 ~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~-Gi~~~s-t~f 99 (350)
T 3g8r_A 22 HGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKAN-GFKAIC-TPF 99 (350)
T ss_dssp HHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHT-TCEEEE-EEC
T ss_pred HHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHc-CCcEEe-ccC
Confidence 356667777778988 88886310 0 1112223333333343 677765 899
Q ss_pred CHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHH
Q 010640 299 TMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALV 371 (505)
Q Consensus 299 t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~ 371 (505)
+.+.+..+.+.|++++.++. ++..+ +..|.. +.+.+.|||.+=|..|-.++..|..
T Consensus 100 D~~svd~l~~~~v~~~KI~S--------~~~~N-----~pLL~~----va~~gKPviLstGmstl~Ei~~Ave 155 (350)
T 3g8r_A 100 DEESVDLIEAHGIEIIKIAS--------CSFTD-----WPLLER----IARSDKPVVASTAGARREDIDKVVS 155 (350)
T ss_dssp SHHHHHHHHHTTCCEEEECS--------SSTTC-----HHHHHH----HHTSCSCEEEECTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECc--------ccccC-----HHHHHH----HHhhCCcEEEECCCCCHHHHHHHHH
Confidence 99999999999999999963 22222 222322 2347899999999999999998864
No 396
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=91.26 E-value=1.9 Score=43.58 Aligned_cols=118 Identities=8% Similarity=-0.026 Sum_probs=81.1
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEccC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGMG 319 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~g 319 (505)
++..+.++.+.+.|.+.+-+...++......+.++.+|+.+ +++++.+- .--+.+++ +.+.+.|++.|.-.
T Consensus 167 ~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP-- 244 (392)
T 1tzz_A 167 SMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEEV-- 244 (392)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEECC--
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeecCC--
Confidence 44566677788889999998876544456778888898876 57888773 12255555 33444677776321
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-----CCEEEecc
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-----ASTVMMGS 381 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-----A~~V~~G~ 381 (505)
+. ......+ ++..+..++||++++.+.+..++.+++..| +|+|++-.
T Consensus 245 ---------~~---~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 245 ---------GD---PLDYALQ---AALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp ---------SC---TTCHHHH---HHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred ---------CC---hhhHHHH---HHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 10 0122223 344455689999999999999999999998 89888753
No 397
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.09 E-value=0.62 Score=48.97 Aligned_cols=68 Identities=25% Similarity=0.325 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhC------CCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTY------PELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~------~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.+..+.++|+|+|.+....|. ....++.+..+++.+ .++||++ |++.+.+++.+++.+|||++.++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 46678889999999999543231 123456666666654 3688877 89999999999999999999775
No 398
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=91.01 E-value=0.53 Score=47.23 Aligned_cols=69 Identities=16% Similarity=0.192 Sum_probs=52.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC--C------CchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ--G------NSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~--g------~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
+..+.++.+.+.|+|++.+.... . .....++.++.+++.+ ++||++ |.+.+.+.+..+++.| +|.|.++
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 45566788888999999986421 0 1123467788888877 788877 6778999999999999 9999664
No 399
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=91.01 E-value=4.5 Score=40.51 Aligned_cols=118 Identities=10% Similarity=0.106 Sum_probs=82.2
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCC--CCchhHHHHHHHHHHhC-CCceEEEc--ccCC-HHHHHH----HHHcCCCEEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQ--GNSSFQIEMIKYAKKTY-PELDVIGG--NVVT-MYQAQN----LIEAGVDGLRV 316 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~--g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t-~e~a~~----l~~aGad~I~v 316 (505)
++..+.++.+.+.|.+.+-+...+ +.....++.++.+|+.+ ++.++++- .--+ .++|.. +.+.|++.|.-
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEq 227 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEE 227 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEEC
Confidence 567788888899999999987753 23466788889999986 57888873 1235 666544 44467777742
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
.. . ......+. +..+..++||++++.+.+..++.+++..| +|.|++-.
T Consensus 228 P~-----------~---~~~~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 228 PV-----------L---ADSLISYE---KLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp SS-----------C---TTCHHHHH---HHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred CC-----------C---cccHHHHH---HHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 11 0 01233333 33445689999999999999999999876 78887654
No 400
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=91.00 E-value=0.51 Score=47.90 Aligned_cols=69 Identities=16% Similarity=0.269 Sum_probs=50.5
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCC----------chhHHHHHHHHHHhC--CCceEEE-cccCCHHHHHHHHHcCCCEEE
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGN----------SSFQIEMIKYAKKTY--PELDVIG-GNVVTMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~----------~~~~~~~i~~l~~~~--~~~~Vi~-g~V~t~e~a~~l~~aGad~I~ 315 (505)
..+.++.+.++|+|+|.+....|+ ....++.+.++.+.. .++|||+ |++.+.+++.+++.+||+++.
T Consensus 194 t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~ 273 (400)
T 3ffs_A 194 TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 273 (400)
T ss_dssp SHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEE
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 357788899999999998322111 123456666666542 2789988 889999999999999999998
Q ss_pred Ec
Q 010640 316 VG 317 (505)
Q Consensus 316 v~ 317 (505)
++
T Consensus 274 vG 275 (400)
T 3ffs_A 274 IG 275 (400)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 401
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.99 E-value=1.3 Score=42.98 Aligned_cols=96 Identities=20% Similarity=0.183 Sum_probs=61.5
Q ss_pred HHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccC-cChHHHHHHHHHHHhhcCCcEEecC
Q 010640 280 IKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIADG 358 (505)
Q Consensus 280 i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa~G 358 (505)
++.+++. +-++..-++.+.-.|+.+.++|+|+|.++..+ ........+.+ ++.-+.+..++..++..++||++|.
T Consensus 7 lr~l~~~--~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~--~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 82 (290)
T 2hjp_A 7 LRAALDS--GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFE--LSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADI 82 (290)
T ss_dssp HHHHHHH--CCCEEEEECSSHHHHHHHHHHTCSEEEECHHH--HHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEEChHH--HHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3344444 34666668899999999999999999987311 11111111112 3333455566677777789999996
Q ss_pred --CCCCHHHH----HHHHHhCCCEEEe
Q 010640 359 --GISNSGHI----VKALVLGASTVMM 379 (505)
Q Consensus 359 --GI~~~~di----~kal~lGA~~V~~ 379 (505)
|-.++.++ .+.+.+||++|.+
T Consensus 83 d~Gyg~~~~~~~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 83 DTGFGNAVNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp TTTTSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 54465544 3456799999976
No 402
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=90.90 E-value=1 Score=43.96 Aligned_cols=90 Identities=10% Similarity=0.081 Sum_probs=58.1
Q ss_pred CceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccC-cChHHHHHHHHHHHhhcCCcEEecC--CCCCHHH
Q 010640 289 ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIADG--GISNSGH 365 (505)
Q Consensus 289 ~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa~G--GI~~~~d 365 (505)
+-++..-++.+.-.|+.+.++|+|+|.++..+.+.. ....+.+ ++.-+.+..++..++..++||++|. |-.++.+
T Consensus 28 ~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~--~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~ 105 (305)
T 3ih1_A 28 NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTAS--KGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLN 105 (305)
T ss_dssp SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHH--HTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHH
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHh--CCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHH
Confidence 456666688899999999999999999873111111 1122222 2333344455666666789999996 5556555
Q ss_pred HH----HHHHhCCCEEEec
Q 010640 366 IV----KALVLGASTVMMG 380 (505)
Q Consensus 366 i~----kal~lGA~~V~~G 380 (505)
+. ....+||++|.+=
T Consensus 106 v~~~v~~l~~aGaagv~iE 124 (305)
T 3ih1_A 106 VARTAVEMVEAKVAAVQIE 124 (305)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHhCCcEEEEC
Confidence 43 3456999999664
No 403
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=90.70 E-value=1.1 Score=45.15 Aligned_cols=112 Identities=18% Similarity=0.270 Sum_probs=75.6
Q ss_pred ccHHHHHHHHHHcCccEEEEeCC---------CCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSS---------QGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~---------~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
+...+.++.+.++|++++-...- .|.+...+..++..++.+ ++|++. ++.+.+.+..+.+. +|++.++
T Consensus 156 e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~-Gl~~~t-e~~d~~~~~~l~~~-vd~lkIg 232 (385)
T 3nvt_A 156 EQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY-GLGVIS-EIVTPADIEVALDY-VDVIQIG 232 (385)
T ss_dssp HHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-TCEEEE-ECCSGGGHHHHTTT-CSEEEEC
T ss_pred HHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc-CCEEEE-ecCCHHHHHHHHhh-CCEEEEC
Confidence 34667788888999999977541 122334455555555554 788876 88899999988888 9999886
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCC-CCHHHHHHHHH----hCCCEEE
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGI-SNSGHIVKALV----LGASTVM 378 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI-~~~~di~kal~----lGA~~V~ 378 (505)
.+ ...+ ... .+.+...+.||+.+-|. .+..++..|.. .|..-+.
T Consensus 233 s~--------~~~n-----~~L----L~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~ 281 (385)
T 3nvt_A 233 AR--------NMQN-----FEL----LKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKII 281 (385)
T ss_dssp GG--------GTTC-----HHH----HHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEE
T ss_pred cc--------cccC-----HHH----HHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 21 1111 111 23334578999999999 89999988864 4654343
No 404
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=90.69 E-value=1.1 Score=42.35 Aligned_cols=112 Identities=14% Similarity=0.137 Sum_probs=69.0
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCC---------CchhHHHHHHHHH---HhCCCceEEEcccCCHHHHHHHHHcCCCEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQG---------NSSFQIEMIKYAK---KTYPELDVIGGNVVTMYQAQNLIEAGVDGL 314 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g---------~~~~~~~~i~~l~---~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I 314 (505)
.+..+.++.+++.|++++.+-.-.. ......+..+.++ +.+ ++++++-. ....+..+|+|+|
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~-~~~liInd-----~~~lA~~~gAdGV 116 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRY-GALFAVND-----RADIARAAGADVL 116 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHT-TCEEEEES-----CHHHHHHHTCSEE
T ss_pred chHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhh-CCEEEEeC-----HHHHHHHhCCCEE
Confidence 3477889999999999998844331 1233444444443 344 78888731 2233567899998
Q ss_pred EEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccccc
Q 010640 315 RVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLA 384 (505)
Q Consensus 315 ~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~ 384 (505)
-++. .. .|. .++++... .+..|-. .+.|..++.+|...|||.|.+|..|-
T Consensus 117 HLg~--------~d-----l~~----~~~r~~~~-~~~~iG~--S~ht~~Ea~~A~~~GaDyI~vgpvf~ 166 (243)
T 3o63_A 117 HLGQ--------RD-----LPV----NVARQILA-PDTLIGR--STHDPDQVAAAAAGDADYFCVGPCWP 166 (243)
T ss_dssp EECT--------TS-----SCH----HHHHHHSC-TTCEEEE--EECSHHHHHHHHHSSCSEEEECCSSC
T ss_pred EecC--------Cc-----CCH----HHHHHhhC-CCCEEEE--eCCCHHHHHHHhhCCCCEEEEcCccC
Confidence 5542 11 121 12233221 1222222 57999999999999999999998774
No 405
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.59 E-value=1.3 Score=43.41 Aligned_cols=68 Identities=16% Similarity=0.290 Sum_probs=49.2
Q ss_pred CccHHHHHHHHHHcCccEEEEeCC---CC--Cc-----hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEE
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSS---QG--NS-----SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGL 314 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~---~g--~~-----~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I 314 (505)
.+...++++.++++|+|+|-|... .| .+ ..++..++.+++.++++||.+ .-...+.++.+.++|++.|
T Consensus 64 ~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI-DT~~~~VaeaAl~aGa~iI 141 (318)
T 2vp8_A 64 DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV-DTWRAQVAKAACAAGADLI 141 (318)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE-ECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE-eCCCHHHHHHHHHhCCCEE
Confidence 345678889999999999988642 12 11 134555777777766788866 5668899999999999977
No 406
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=90.54 E-value=1.2 Score=43.16 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=61.8
Q ss_pred HHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCC-cceeecccccccC-cChHHHHHHHHHHHhhcCCcEEe
Q 010640 279 MIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS-GSICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIA 356 (505)
Q Consensus 279 ~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~-g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa 356 (505)
.++.+++. +-++..-++.+.-.|+.+.++|.|+|.++..+ +....+ ..+.+ ++.-+.+..++..++..++||++
T Consensus 13 ~lr~l~~~--~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G--~pD~~~vt~~em~~~~~~I~r~~~~Pvia 88 (298)
T 3eoo_A 13 KFRAAVAA--EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLG--IPDLGISTMDDVLVDANRITNATNLPLLV 88 (298)
T ss_dssp HHHHHHHH--SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTC--CCSSSCCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcC--CCCCCCCCHHHHHHHHHHHHhhcCCeEEE
Confidence 34444444 45666668899999999999999999987311 111111 11112 23333455566667777899999
Q ss_pred cC--CCCCHHHHH----HHHHhCCCEEEec
Q 010640 357 DG--GISNSGHIV----KALVLGASTVMMG 380 (505)
Q Consensus 357 ~G--GI~~~~di~----kal~lGA~~V~~G 380 (505)
|+ |-.++.++. ....+||++|.+=
T Consensus 89 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iE 118 (298)
T 3eoo_A 89 DIDTGWGGAFNIARTIRSFIKAGVGAVHLE 118 (298)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCeEEEEC
Confidence 96 544665543 3456999999764
No 407
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=90.48 E-value=5.1 Score=39.95 Aligned_cols=119 Identities=8% Similarity=0.147 Sum_probs=79.5
Q ss_pred CCccHHHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHH----HHcCCCEEEE
Q 010640 245 TRESDKERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNL----IEAGVDGLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l----~~aGad~I~v 316 (505)
+++...+.++.+++. |...+-+..........++.++.+|+.+ ++.++++- .--+.++|..+ .+.|++.|.-
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq 218 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAEE 218 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEES
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEEC
Confidence 445566777788888 9999888664322225688889999987 57888773 22366665443 3456666631
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. +. ...+..+ ++..+..++||.+++.+.+..|+.+++..| +|.|++-
T Consensus 219 P-----------~~---~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 219 L-----------CP---ADDVLSR---RRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp C-----------SC---TTSHHHH---HHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEEC
T ss_pred C-----------CC---cccHHHH---HHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEee
Confidence 1 10 0123333 333445689999999999999999999988 7888874
No 408
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=90.47 E-value=5.3 Score=39.36 Aligned_cols=117 Identities=20% Similarity=0.191 Sum_probs=79.2
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc-c-cCCHHHH----HHHHHcCCC--EEEE
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG-N-VVTMYQA----QNLIEAGVD--GLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g-~-V~t~e~a----~~l~~aGad--~I~v 316 (505)
.+++..+.+..+.+.|.+.+-+...+ .....++.++.+|+.-++.++.+- + --+.+++ +.+.+.|++ .|.-
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~ 217 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQ 217 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEEC
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeC
Confidence 34456667777888999999887654 234467788888887457888772 1 1255554 556667888 7632
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEe
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMM 379 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~ 379 (505)
. +. ......+..+ .+..++||.+++.+.+..++.+++..| +|.|++
T Consensus 218 P-----------~~---~~~~~~~~~l---~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 218 P-----------VR---REDIEGLKFV---RFHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp C-----------SC---TTCHHHHHHH---HHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred C-----------CC---cccHHHHHHH---HHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 1 10 1123333333 344679999999999999999999888 788887
No 409
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=90.41 E-value=1.6 Score=42.35 Aligned_cols=113 Identities=15% Similarity=0.211 Sum_probs=69.6
Q ss_pred HHHHHHHcCccEEE--EeCCCCC--chhHHHHHHHHHHhC--CCceEEEc---------cc---CCHH----HHHHHHHc
Q 010640 252 RLEHLVKAGVNVVV--LDSSQGN--SSFQIEMIKYAKKTY--PELDVIGG---------NV---VTMY----QAQNLIEA 309 (505)
Q Consensus 252 ~~~~lieaGad~I~--i~~~~g~--~~~~~~~i~~l~~~~--~~~~Vi~g---------~V---~t~e----~a~~l~~a 309 (505)
.++.+++.|+|++. ++...|. ...+++.+.++.+.+ -++|+++- .+ .+++ .++.+.++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 46677888999976 4444332 234444444444322 16776652 12 2443 45667778
Q ss_pred CCC----EEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCC--HHH----HHHHHH-hCCCEEE
Q 010640 310 GVD----GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISN--SGH----IVKALV-LGASTVM 378 (505)
Q Consensus 310 Gad----~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~--~~d----i~kal~-lGA~~V~ 378 (505)
|+| .+++-. + +.+ .+..+.+.+||+.+||=.. ..+ +..|+. .||.++.
T Consensus 213 GADs~~tivK~~y-------~-----------e~f---~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 213 GNDSSYTWMKLPV-------V-----------EEM---ERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp SSCCSSEEEEEEC-------C-----------TTH---HHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred CCCcCCCEEEeCC-------c-----------HHH---HHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 999 998731 1 112 3334445699999998774 344 456778 6999999
Q ss_pred ecccccC
Q 010640 379 MGSFLAG 385 (505)
Q Consensus 379 ~G~~f~~ 385 (505)
+|+-+..
T Consensus 272 vGRNIfQ 278 (307)
T 3fok_A 272 VGRTLLY 278 (307)
T ss_dssp ECTTTSS
T ss_pred echhhcc
Confidence 9987543
No 410
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=90.37 E-value=1.7 Score=41.42 Aligned_cols=67 Identities=18% Similarity=0.149 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCccEEEEeC---CCCC----chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDS---SQGN----SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~---~~g~----~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.++++.+.+....++.+.+ ..|. .....+.++.+++.. ++||.+ +++.+++++..+..+|+|+++||
T Consensus 160 ~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 160 DDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp HHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3556666665444443322 1222 233468888898876 788877 56778999999999999999986
No 411
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.37 E-value=1.4 Score=42.80 Aligned_cols=96 Identities=14% Similarity=0.186 Sum_probs=61.2
Q ss_pred HHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCC-cceeecccccccC-cChHHHHHHHHHHHhhcCCcEEec
Q 010640 280 IKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS-GSICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIAD 357 (505)
Q Consensus 280 i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~-g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa~ 357 (505)
++.+++. +-++..-++.+.-.|+.+.++|.|+|.++..+ +....+ ..+.+ ++.-+.+..++..++..++||++|
T Consensus 9 lr~l~~~--~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G--~pD~~~vt~~em~~~~~~I~~~~~~PviaD 84 (295)
T 1xg4_A 9 FRAALTK--ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLG--LPDLGISTLDDVLTDIRRITDVCSLPLLVD 84 (295)
T ss_dssp HHHHHHH--SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTC--CCSSSCSCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHhC--CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcC--CCCCCCCCHHHHHHHHHHHHhhCCCCEEec
Confidence 3444444 34666668899999999999999999987321 111111 11112 333344555666777778999999
Q ss_pred C--CCC-CHHHHH----HHHHhCCCEEEe
Q 010640 358 G--GIS-NSGHIV----KALVLGASTVMM 379 (505)
Q Consensus 358 G--GI~-~~~di~----kal~lGA~~V~~ 379 (505)
. |-. ++.++. +...+||++|.+
T Consensus 85 ~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 85 ADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp CTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 6 544 555443 456789999976
No 412
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=90.34 E-value=2.4 Score=41.23 Aligned_cols=113 Identities=17% Similarity=0.230 Sum_probs=66.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 113 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVML 113 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 36677888999999999987766532 23344444444433 36899886432 355667788899999977
Q ss_pred ccCCcceeecccccccCcChHHH-HHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~-l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-.. +.-....++..++|||.= .|+.=..+..+-|+
T Consensus 114 ~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 114 VA----PYYN-------KPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred cC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 41 1111 122232 333344555567888763 25543444444443
No 413
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.34 E-value=1.7 Score=42.41 Aligned_cols=70 Identities=10% Similarity=0.064 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 109 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMA 109 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEE
Confidence 46677888999999999887665532 23344444444433 36899986332 355678888999999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 110 ~ 110 (309)
T 3fkr_A 110 M 110 (309)
T ss_dssp C
T ss_pred c
Confidence 4
No 414
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=90.31 E-value=2 Score=39.69 Aligned_cols=122 Identities=14% Similarity=0.139 Sum_probs=84.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
...+.++.+.+....+ .|-.+. ...-+..++.+.+. ++++-+.-+.|...|..+.++|++++. +..+|
T Consensus 67 ~mi~eA~~l~~~~~nv-~IKIP~--T~eGl~A~~~L~~~--GI~vn~TliFS~~QA~~aa~AGa~~iS-------pfvgR 134 (220)
T 1l6w_A 67 GMVNDALKLRSIIADI-VVKVPV--TAEGLAAIKMLKAE--GIPTLGTAVYGAAQGLLSALAGAEYVA-------PYVNR 134 (220)
T ss_dssp HHHHHHHHHHHHSTTC-EEEEEC--SHHHHHHHHHHHHH--TCCEEEEEECSHHHHHHHHHHTCSEEE-------EBHHH
T ss_pred HHHHHHHHHHHhCCCE-EEEeCC--CHHHHHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHCCCeEEE-------eccch
Confidence 3555566666655443 222211 12335666777676 788877778899999999999999873 23333
Q ss_pred cccccCcChHHHHHHHHHHHhhcC--CcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSG--VPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~--ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
...||.+....+.++.++.+.++ ..++++ +++++.++..|..+|++.+-+....
T Consensus 135 -idd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S~r~~~~v~~~~l~G~d~~Tip~~~ 190 (220)
T 1l6w_A 135 -IDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-SFKTPRQALDCLLAGCESITLPLDV 190 (220)
T ss_dssp -HHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-CCSSHHHHHHHHHTTCSEEEECHHH
T ss_pred -hhcccccHHHHHHHHHHHHHhcCCCeEEeec-ccCCHHHHHHHHHhCCCeEECCHHH
Confidence 45577788888888887776654 445554 8999999999999999997776544
No 415
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=90.27 E-value=2.5 Score=40.77 Aligned_cols=111 Identities=14% Similarity=0.165 Sum_probs=65.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 101 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLS 101 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 46678888999999999987766532 23344444444433 36899986432 345677788899999977
Q ss_pred ccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCC-CHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGIS-NSGHIVKA 369 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~-~~~di~ka 369 (505)
.. +.+. .|+-. .+....+.++..++||+.= .|+. ++..+.+.
T Consensus 102 ~~----P~y~-------~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 150 (289)
T 2yxg_A 102 IT----PYYN-------KPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLL 150 (289)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 41 1111 12222 2333344455567888763 2554 44444443
No 416
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=90.12 E-value=5.6 Score=40.70 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=81.0
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCC------CC------chhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HH
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQ------GN------SSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QN 305 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~------g~------~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~ 305 (505)
++++..+.++.+++.|...+-+.... |. ....++.++.+|+.+ ++.++++. .--+.++| +.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~ 225 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQA 225 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHH
Confidence 34556777888888999999886532 11 134577888888887 57888883 12356655 44
Q ss_pred HHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 306 LIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 306 l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
+.+.|++.|.-.. . ......+.. ..+..++||++++.+.+..|+.+++..| +|.|++-
T Consensus 226 Le~~~i~~iEeP~-----------~---~~~~~~~~~---l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d 284 (433)
T 3rcy_A 226 IEPYSPLWYEEPV-----------P---PDNVGAMAQ---VARAVRIPVATGERLTTKAEFAPVLREGAAAILQPA 284 (433)
T ss_dssp HGGGCCSEEECCS-----------C---TTCHHHHHH---HHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred hhhcCCCEEECCC-----------C---hhhHHHHHH---HHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 5567888884221 0 012333433 3445689999999999999999999987 7888775
No 417
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.10 E-value=2.6 Score=40.76 Aligned_cols=111 Identities=18% Similarity=0.246 Sum_probs=65.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALV 101 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 36677888999999999987766532 23344444444433 36899986432 345667788899999977
Q ss_pred ccCCcceeecccccccCcChHHH-HHHHHHHHhhcCCcEEec-----CCC-CCHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIAD-----GGI-SNSGHIVKA 369 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~-l~~v~~~~~~~~ipvIa~-----GGI-~~~~di~ka 369 (505)
.. +.+. .|+-.. +......++..++||+.= .|+ .++..+.+.
T Consensus 102 ~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 150 (294)
T 2ehh_A 102 VV----PYYN-------KPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKL 150 (294)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHH
Confidence 41 1111 122222 333344455567888763 255 344444444
No 418
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=90.07 E-value=0.82 Score=45.87 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCccEEEEeCCC--CCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ--GNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~--g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
..+.++.+.+.|+|++.++... +.....++.++.+++.+ ++||++ |.+ +.+.+..+++.| +|+|.++
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY-QGVLIYAGRY-NAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC-CCcEEEeCCC-CHHHHHHHHHCCCcceehhc
Confidence 4556788888999999996531 11112356788889988 788877 667 999999999998 9999664
No 419
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.02 E-value=1.4 Score=41.92 Aligned_cols=90 Identities=22% Similarity=0.189 Sum_probs=59.9
Q ss_pred CceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeeccccccc-CcChHHHHHHHHHHHhhcCCcEEecC--CCCC--H
Q 010640 289 ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAV-GRGQATAVYKVSSIAAQSGVPVIADG--GISN--S 363 (505)
Q Consensus 289 ~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~-g~p~~~~l~~v~~~~~~~~ipvIa~G--GI~~--~ 363 (505)
+-+++.-++.+.-.|+.+.++|+|+|.++..+-+...+ ..+. .++.-+.+..++..++..++||++|. |-.+ .
T Consensus 19 ~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G--~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~~ 96 (255)
T 2qiw_A 19 GKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATG--SSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSPA 96 (255)
T ss_dssp CCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTT--CCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCHH
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCC--CCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHHH
Confidence 45677778899999999999999999986311111111 1111 23434455566667777789999995 4222 5
Q ss_pred HHHHHHHHhCCCEEEec
Q 010640 364 GHIVKALVLGASTVMMG 380 (505)
Q Consensus 364 ~di~kal~lGA~~V~~G 380 (505)
.-+.+.+..||++|.+=
T Consensus 97 ~~~~~l~~aGa~gv~iE 113 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVE 113 (255)
T ss_dssp HHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHcCCcEEEEC
Confidence 56667778999999773
No 420
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.00 E-value=2.9 Score=40.67 Aligned_cols=70 Identities=27% Similarity=0.400 Sum_probs=48.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv 117 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLV 117 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 36678888999999999987766532 23344455444443 36899986432 355677788899999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 118 ~ 118 (304)
T 3cpr_A 118 V 118 (304)
T ss_dssp E
T ss_pred C
Confidence 4
No 421
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=89.99 E-value=2.4 Score=42.77 Aligned_cols=120 Identities=10% Similarity=0.108 Sum_probs=83.5
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc-c-cCCHHHH----HHHHHcCCCEEEEc
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG-N-VVTMYQA----QNLIEAGVDGLRVG 317 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g-~-V~t~e~a----~~l~~aGad~I~v~ 317 (505)
++++..+.++.+.+.|.+.+-+.... .....++.++.+|+.+ ++.++++. | --+.++| +.+.+.|++.|.-.
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP 229 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEEP 229 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEESC
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEECC
Confidence 34556677788888999999887643 2456788889999987 57888873 1 1255554 55667899888421
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHH-hhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIA-AQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~-~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
. . ......+ ++.. +..++||++++.+.+..|+.+++..| +|.|++-..
T Consensus 230 ~-----------~---~~d~~~~---~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~ 279 (389)
T 3ozy_A 230 L-----------S---IDDIEGH---RILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADAS 279 (389)
T ss_dssp S-----------C---TTCHHHH---HHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred C-----------C---cccHHHH---HHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcc
Confidence 1 0 0122333 3444 55689999999999999999999887 788887643
No 422
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=89.96 E-value=1.1 Score=43.27 Aligned_cols=90 Identities=17% Similarity=0.130 Sum_probs=59.8
Q ss_pred CceEEEcccCCHHHHHHHHHcCCCEEEEccCC-cceeecccccccC-cChHHHHHHHHHHHhhcCCcEEecC--CCCCHH
Q 010640 289 ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS-GSICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIADG--GISNSG 364 (505)
Q Consensus 289 ~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~-g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa~G--GI~~~~ 364 (505)
+-++..-++.+.-.|+.+.++|+|+|.++..+ +....+ ..+.+ ++.-+.+..++..++..++||++|. |-.++.
T Consensus 20 ~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG--~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~ 97 (287)
T 3b8i_A 20 SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLA--APDFALITLSEFVEQATRIGRVARLPVIADADHGYGNAL 97 (287)
T ss_dssp SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHS--CCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcC--CCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHH
Confidence 44666668899999999999999999987321 111111 11112 3444455566777777789999996 544665
Q ss_pred HH----HHHHHhCCCEEEec
Q 010640 365 HI----VKALVLGASTVMMG 380 (505)
Q Consensus 365 di----~kal~lGA~~V~~G 380 (505)
++ .+.+.+||++|.+=
T Consensus 98 ~~~~~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 98 NVMRTVVELERAGIAALTIE 117 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHhCCeEEEEc
Confidence 54 34567999999873
No 423
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.94 E-value=3.8 Score=41.39 Aligned_cols=119 Identities=18% Similarity=0.195 Sum_probs=81.4
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCC-CC-Cc-hhHHHHHHHHHHhC-CCceEEEc--ccC--CHHHH----HHHHHcCCC
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSS-QG-NS-SFQIEMIKYAKKTY-PELDVIGG--NVV--TMYQA----QNLIEAGVD 312 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~-~g-~~-~~~~~~i~~l~~~~-~~~~Vi~g--~V~--t~e~a----~~l~~aGad 312 (505)
..++..+.+..+.++|.+.+-+..+ .| .. ....+.++.+|+.+ ++.++.+. .-- +.+++ +.+.+.|++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~ 224 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVL 224 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCC
Confidence 3445667777888899999988721 12 23 45678888899887 57888773 123 55554 556678988
Q ss_pred EEEEccCCcceeecccccccCcChHHHHHHHHHHHh-hcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 313 GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAA-QSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 313 ~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~-~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
.|.-.. . ......+ ++..+ ..++||++++.+.+..++.+++..| +|+|++-
T Consensus 225 ~iEqP~-----------~---~~d~~~~---~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 277 (401)
T 2hzg_A 225 WLEEPF-----------D---AGALAAH---AALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQID 277 (401)
T ss_dssp EEECCS-----------C---TTCHHHH---HHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEEC
T ss_pred EEECCC-----------C---ccCHHHH---HHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeC
Confidence 874221 0 0122333 33344 4679999999999999999999887 8999884
No 424
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=89.91 E-value=0.98 Score=45.13 Aligned_cols=66 Identities=14% Similarity=0.229 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCccEEEEeCCCCCc----------hhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGNS----------SFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~~----------~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.++.+.++|+|+|.+....|.. ...++.+..+.+.. . |||+ |++.+..++.+++.+|||++.++
T Consensus 152 ~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 152 YAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 356788999999999984332221 12344444444332 2 8877 89999999999999999999886
No 425
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.89 E-value=2.6 Score=41.03 Aligned_cols=114 Identities=18% Similarity=0.284 Sum_probs=67.6
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~ 315 (505)
+...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavl 115 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLL 115 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 346678889999999999987766632 33344444444433 36899996432 35567888889999997
Q ss_pred EccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 316 VGMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
+.. +.+. .|+.. .+......++..++||+.= -|+.=..+....|+
T Consensus 116 v~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 116 VVT----PYYS-------KPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp EEC----CCSS-------CCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred ECC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 741 1111 12222 2333344555567888754 14444444444444
No 426
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=89.88 E-value=0.2 Score=47.95 Aligned_cols=69 Identities=23% Similarity=0.249 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEe
Q 010640 300 MYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMM 379 (505)
Q Consensus 300 ~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~ 379 (505)
.+.|+.+.+.|++.+.+- .+.+ .....+.++ ++...+|+...|||++- |+.+.+ +||+-|.+
T Consensus 41 ~~~A~~~~~~Ga~~l~vv----------DL~~---~n~~~i~~i---~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Vii 102 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVI----------KLGP---NNDDAAREA---LQESPQFLQVGGGINDT-NCLEWL-KWASKVIV 102 (260)
T ss_dssp HHHHHHHHHTTCTTCEEE----------EESS---SCHHHHHHH---HHHSTTTSEEESSCCTT-THHHHT-TTCSCEEE
T ss_pred HHHHHHHHHcCCCEEEEE----------eCCC---CCHHHHHHH---HhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEE
Confidence 456788888999877542 0111 233444443 44467999999999987 999999 99999999
Q ss_pred cccccCC
Q 010640 380 GSFLAGS 386 (505)
Q Consensus 380 G~~f~~~ 386 (505)
|+..+..
T Consensus 103 gs~a~~~ 109 (260)
T 2agk_A 103 TSWLFTK 109 (260)
T ss_dssp CGGGBCT
T ss_pred CcHHHhh
Confidence 9987643
No 427
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=89.86 E-value=4.8 Score=40.49 Aligned_cols=120 Identities=14% Similarity=0.194 Sum_probs=81.9
Q ss_pred CCccHHHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEE
Q 010640 245 TRESDKERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v 316 (505)
+++...+.++.+++. |...+-+..........++.++.+|+.+ +++++++- .--+.++| +.+.+.|++.|.-
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe 246 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIEE 246 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC
Confidence 344566777888888 9999888665434456788899999987 67888873 12355555 4455578877732
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
. +. ...+..+. +..+..++||.++..+.+..|+.+++..| +|.|++--
T Consensus 247 P-----------~~---~~d~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 247 P-----------VP---QENLSGHA---AVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp C-----------SC---TTCHHHHH---HHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred C-----------CC---cchHHHHH---HHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 1 10 01233333 33445689999999999999999999988 67777653
No 428
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.86 E-value=2.5 Score=41.73 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=66.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 135 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLL 135 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 36678888999999999987766532 23344455444443 36899886332 345667788899999977
Q ss_pred ccCCcceeecccccccCcChHHH-HHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~-l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-.. +.-....++..++|||.= .|+.=..+..+-|+
T Consensus 136 ~~----P~Y~-------~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 185 (332)
T 2r8w_A 136 AP----VSYT-------PLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLA 185 (332)
T ss_dssp CC----CCSS-------CCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHH
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 42 1111 122222 333344555567888763 25543344444443
No 429
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=89.85 E-value=0.64 Score=44.40 Aligned_cols=66 Identities=17% Similarity=0.233 Sum_probs=47.9
Q ss_pred HHHHHHHHcCccEEEEeC-CCCC--chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 251 ERLEHLVKAGVNVVVLDS-SQGN--SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~-~~g~--~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
++++.+.+.|++++.... ..|. .....+.++++++.. ++|+++ |++.+++++..+.++|+|++.|+
T Consensus 138 ~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~-~iPviv~gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 138 VLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQA-KVPVIVDAGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp HHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHC-SSCBEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcC-CCCEEEEeCCCCHHHHHHHHHcCCCEEEEc
Confidence 567778888999884311 1121 111256777888765 789877 58889999999999999999886
No 430
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=89.84 E-value=2.2 Score=40.64 Aligned_cols=105 Identities=15% Similarity=0.219 Sum_probs=71.7
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCC---------CCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQ---------GNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~---------g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
+...+.++.+.++|++++-+..-. |.....+..++.+++.+ ++|++. ++.+.+.+..+.+. +|++.++
T Consensus 37 e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~-Gl~~~t-e~~d~~~~~~l~~~-vd~~kIg 113 (262)
T 1zco_A 37 EQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY-GLVTVT-EVMDTRHVELVAKY-SDILQIG 113 (262)
T ss_dssp HHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-TCEEEE-ECCCGGGHHHHHHH-CSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc-CCcEEE-eeCCHHhHHHHHhh-CCEEEEC
Confidence 346777888889999998775421 11133445555555554 788876 88888889999999 9999886
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCC-CHHHHHHHHH
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGIS-NSGHIVKALV 371 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~-~~~di~kal~ 371 (505)
.+ ... ....+ ++. .+.+.||+..-|.. +..++..|..
T Consensus 114 a~--------~~~-----n~~ll---~~~-a~~~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 114 AR--------NSQ-----NFELL---KEV-GKVENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp GG--------GTT-----CHHHH---HHH-TTSSSCEEEECCTTCCHHHHHHHHH
T ss_pred cc--------ccc-----CHHHH---HHH-HhcCCcEEEecCCCCCHHHHHHHHH
Confidence 21 111 11122 222 33789999999997 9999998884
No 431
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=89.76 E-value=0.68 Score=42.95 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=74.0
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCC--CceEEE--ccc---CC----HHHHHHHHHcCCCEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYP--ELDVIG--GNV---VT----MYQAQNLIEAGVDGLR 315 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~--~~~Vi~--g~V---~t----~e~a~~l~~aGad~I~ 315 (505)
++..+.++.+.+.+++.++++. .+... .++.+. ++.+.. +-- .+ ..+++.+++.|||.|+
T Consensus 19 ~~i~~l~~~a~~~~~~aVcv~p------~~v~~---~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd 89 (220)
T 1ub3_A 19 EEVAKAAEEALEYGFYGLCIPP------SYVAW---VRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVD 89 (220)
T ss_dssp HHHHHHHHHHHHHTCSEEECCG------GGHHH---HHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECH------HHHHH---HHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEE
Confidence 4456677777788999998732 23333 233332 344322 110 11 2577889999999998
Q ss_pred EccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHH----HhCCCEEEeccccc
Q 010640 316 VGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKAL----VLGASTVMMGSFLA 384 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal----~lGA~~V~~G~~f~ 384 (505)
+-..-|. ...+.---...-+..+.+.|....+|+|..-+..+...+.+|- .+|||+|--.|-|.
T Consensus 90 ~vinig~-----~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 90 MVLHLGR-----AKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp EECCHHH-----HHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred ecccchh-----hhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 8532111 1111001123445555666654468988888888988887764 67999998887664
No 432
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=89.75 E-value=0.86 Score=46.34 Aligned_cols=68 Identities=22% Similarity=0.289 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCccEEEEeCCC----------CCchhHHHHHHHHHHhC--CCceEEE-cccCCHHHHHHHHHcCCCEEEE
Q 010640 250 KERLEHLVKAGVNVVVLDSSQ----------GNSSFQIEMIKYAKKTY--PELDVIG-GNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~----------g~~~~~~~~i~~l~~~~--~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v 316 (505)
.+.++.+.++|+|+|.+.... ++....++.+..+++.. .++||++ |++.+.+++.+++.+|||++.+
T Consensus 205 ~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 205 KEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhh
Confidence 467788889999999982211 11112345555565532 2789887 8999999999999999999988
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
+
T Consensus 285 G 285 (404)
T 1eep_A 285 G 285 (404)
T ss_dssp C
T ss_pred C
Confidence 6
No 433
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=89.62 E-value=1.1 Score=45.00 Aligned_cols=67 Identities=22% Similarity=0.430 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCccEEEEeCCC--CCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQ--GNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~--g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
..+.++.+.+.|+|++.++... +.....++.++.+++.+ ++||++ |.+ +.+.+..+++.| +|+|.++
T Consensus 253 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 253 ALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-CCCEEEECCc-CHHHHHHHHHCCCccEEEEC
Confidence 4456778888999999997521 11112356788888888 789877 566 999999999998 9999775
No 434
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=89.59 E-value=3 Score=40.35 Aligned_cols=113 Identities=17% Similarity=0.193 Sum_probs=67.0
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 108 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS 108 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 46677888999999999987766632 23344444444433 36899986432 345677888999999976
Q ss_pred ccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-. .+......++..++||+.= -|+.=..+..+-|+
T Consensus 109 ~~----P~y~-------~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 109 VV----PYYN-------KPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 41 1111 12222 2333344555567888764 25544444444443
No 435
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.55 E-value=2.7 Score=40.85 Aligned_cols=70 Identities=23% Similarity=0.257 Sum_probs=48.5
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-C-CceEEEcccC-----CHHHHHHHHHcCCCEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-P-ELDVIGGNVV-----TMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~-~~~Vi~g~V~-----t~e~a~~l~~aGad~I~ 315 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. . ++||++|.-. +.+.++.+.++|+|++.
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavl 108 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGIL 108 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 46677888999999999987766632 23344455444443 3 5899996432 35567788889999997
Q ss_pred Ec
Q 010640 316 VG 317 (505)
Q Consensus 316 v~ 317 (505)
+.
T Consensus 109 v~ 110 (301)
T 3m5v_A 109 SV 110 (301)
T ss_dssp EE
T ss_pred Ec
Confidence 74
No 436
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=89.52 E-value=0.46 Score=48.04 Aligned_cols=67 Identities=13% Similarity=0.203 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.+.++.+.++|+|.|.+....|. ....++.+..+++.+ +.||++ |++.+.+++.+++.+|+|++.++
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iG 307 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLG 307 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEES
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhheh
Confidence 46788899999999999332121 112356677777765 558877 89999999999999999999775
No 437
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.45 E-value=1.6 Score=42.61 Aligned_cols=118 Identities=16% Similarity=0.178 Sum_probs=75.6
Q ss_pred cHHHHHHHHHHcCccEEEEeCC-----CCCc--------hhHHHHHHHHHHhCCCceEEEccc--------CCHHHHHHH
Q 010640 248 SDKERLEHLVKAGVNVVVLDSS-----QGNS--------SFQIEMIKYAKKTYPELDVIGGNV--------VTMYQAQNL 306 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~-----~g~~--------~~~~~~i~~l~~~~~~~~Vi~g~V--------~t~e~a~~l 306 (505)
...+.+..+.++|+..+.+... +||. ....+.++.+++.-++..|++.+= ...+.++..
T Consensus 105 ~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay 184 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAY 184 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHH
Confidence 4556678888999999999653 2332 245666666666644555555321 134667888
Q ss_pred HHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEe---cCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 307 IEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIA---DGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 307 ~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa---~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
.++|||+|.+- ++|... ++.+.++..++|+++ .+|-...-.....-.+|...|..|...
T Consensus 185 ~eAGAD~i~~e---------------~~~~~~---~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~ 246 (305)
T 3ih1_A 185 VKAGADAIFPE---------------ALQSEE---EFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTS 246 (305)
T ss_dssp HHHTCSEEEET---------------TCCSHH---HHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHH
T ss_pred HHcCCCEEEEc---------------CCCCHH---HHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHH
Confidence 89999999763 234333 344555566789874 345333334566778999999999654
No 438
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=89.30 E-value=5.8 Score=39.84 Aligned_cols=117 Identities=19% Similarity=0.297 Sum_probs=79.3
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc-c-cCCHH----HHHHHHHcCCCEEEEccCC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG-N-VVTMY----QAQNLIEAGVDGLRVGMGS 320 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g-~-V~t~e----~a~~l~~aGad~I~v~~g~ 320 (505)
+...+.++.+++.|...+-+..........++.++.+|+.++++++++- | --+.+ -++.+.+.|++.|.-.
T Consensus 150 ~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP--- 226 (385)
T 3i6e_A 150 DADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIEQP--- 226 (385)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEECC---
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC---
Confidence 3455667777788999988866443335668888899998888888883 1 11333 4455666788777321
Q ss_pred cceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 321 GSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 321 g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
+. ......+ ++..+..++||.++.-+.+..|+.+++..| +|.|++-
T Consensus 227 --------~~---~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k 273 (385)
T 3i6e_A 227 --------VR---AHHFELM---ARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIK 273 (385)
T ss_dssp --------SC---TTCHHHH---HHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred --------CC---cccHHHH---HHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 10 0122333 344455689999999999999999999887 7888764
No 439
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=89.20 E-value=3.1 Score=40.19 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=48.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 102 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALL 102 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 46677888999999999887766632 33344444444433 36899986432 345667888899999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 103 ~ 103 (291)
T 3tak_A 103 V 103 (291)
T ss_dssp E
T ss_pred c
Confidence 4
No 440
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.20 E-value=3.2 Score=40.52 Aligned_cols=70 Identities=17% Similarity=0.140 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhCCCceEEEcccC-----CHHHHHHHHHcCCCEEEEc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTYPELDVIGGNVV-----TMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v~ 317 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+...++||++|.-. +.+.++.+.++|+|++.+.
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 46677888999999999887665532 3334555555554457899996432 3556788888999999774
No 441
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=89.19 E-value=6.2 Score=39.08 Aligned_cols=120 Identities=13% Similarity=0.142 Sum_probs=80.1
Q ss_pred cCCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHHH----HcCCCEEEE
Q 010640 244 GTRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNLI----EAGVDGLRV 316 (505)
Q Consensus 244 ~~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l~----~aGad~I~v 316 (505)
.+++...+.++.+.+.|...+-+..... ....++.++.+|+.+ +++++++- .--+.+++..+. +.|++.|.-
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iEq 216 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTG-IEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVEQ 216 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC
Confidence 3445566777888889999988865432 345688889999987 67888873 223666664433 345555521
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
. +. ......+. +..+..++||.+++.+.+..|+.+++..| +|.|++--
T Consensus 217 P-----------~~---~~d~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 265 (354)
T 3jva_A 217 P-----------VK---RRDLEGLK---YVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKL 265 (354)
T ss_dssp C-----------SC---TTCHHHHH---HHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred C-----------CC---hhhHHHHH---HHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 1 11 11233333 33445689999999999999999999886 68888864
No 442
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=89.11 E-value=2.7 Score=42.20 Aligned_cols=117 Identities=14% Similarity=0.092 Sum_probs=79.5
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHHH----HcCCCEEEEc
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNLI----EAGVDGLRVG 317 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l~----~aGad~I~v~ 317 (505)
+++...+.++.+.+.|.+.+-+.... .....++.++.+|+.+ +++++++. .--+.+++..+. +.|+ .|.-
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~-~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iEq- 221 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGG-DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFEQ- 221 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEEC-
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEec-
Confidence 34456667777888999999886643 2345678888888887 57888873 123666654433 3454 4421
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEeccc
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGSF 382 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~~ 382 (505)
. .+... ..++..+..++||++++.+.+..|+.+++..| +|.|++...
T Consensus 222 ----------P-----~~~~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~ 269 (378)
T 3eez_A 222 ----------P-----GETLD---DIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLN 269 (378)
T ss_dssp ----------C-----SSSHH---HHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHH
T ss_pred ----------C-----CCCHH---HHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCch
Confidence 1 12222 33444556789999999999999999999987 799988643
No 443
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=89.07 E-value=4.6 Score=40.72 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=81.6
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEcc
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGM 318 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~ 318 (505)
+++..+.++.+.+.|...+-+.... .....++.++.+|+.+ ++.++++- .--+.++| +.+.+.|++.|.-..
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~ 234 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGF-DDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLEEPL 234 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSS-CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCC-CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEECCC
Confidence 5667888888999999998887654 3456788889999987 57788773 12355555 445557888774211
Q ss_pred CCcceeecccccccCcCh-HHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQ-ATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~-~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. ... +..+. +..+..++||.+++.+.+..|+.+++..| +|.|++-
T Consensus 235 -----------~---~~d~~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 235 -----------R---ADRPAAEWA---ELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp -----------C---TTSCHHHHH---HHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred -----------C---ccchHHHHH---HHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 0 011 33333 33445689999999999999999999887 6777764
No 444
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=89.06 E-value=3.6 Score=41.09 Aligned_cols=115 Identities=18% Similarity=0.138 Sum_probs=77.4
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHH-----HHcCCCEEEE
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNL-----IEAGVDGLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l-----~~aGad~I~v 316 (505)
.+++..+.+..+.++|.+.+-++... ......+.++.+|+.+ ++.++.+. .--+.+++..+ .+.|+ .|.-
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~ 223 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISG-EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALEA 223 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCS-CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEEC
T ss_pred CHHHHHHHHHHHHHhChheEEeecCC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcC
Confidence 34456677777888999999887643 2345678888888877 46888773 12366665443 33455 4421
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. .+....+ ++..+..++||++++.+.+..++.+++..| +|+|++-
T Consensus 224 -----------P-----~~~~~~~---~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 224 -----------P-----CATWREC---ISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp -----------C-----BSSHHHH---HHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred -----------C-----cCCHHHH---HHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 1 1123333 344445689999999999999999999987 7888884
No 445
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.05 E-value=1.1 Score=51.26 Aligned_cols=70 Identities=11% Similarity=0.183 Sum_probs=53.9
Q ss_pred cHHHHHHHHHHcCccEEEEeCC-------------------CC------Cc-hhH----HHHHHHHHHhCCCceEEE-cc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSS-------------------QG------NS-SFQ----IEMIKYAKKTYPELDVIG-GN 296 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~-------------------~g------~~-~~~----~~~i~~l~~~~~~~~Vi~-g~ 296 (505)
+..+.++.+.+.|+|.+.+..+ ++ .+ ... ++.+..+++.++++|||+ |+
T Consensus 716 ~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GG 795 (1025)
T 1gte_A 716 DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGG 795 (1025)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESS
T ss_pred HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecC
Confidence 4677888999999999988210 11 11 111 467888888876788876 89
Q ss_pred cCCHHHHHHHHHcCCCEEEEc
Q 010640 297 VVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 297 V~t~e~a~~l~~aGad~I~v~ 317 (505)
+.+.+++.+++.+|+|++.++
T Consensus 796 I~s~~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 796 IDSAESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp CCSHHHHHHHHHTTCSEEEES
T ss_pred cCCHHHHHHHHHcCCCEEEEe
Confidence 999999999999999999886
No 446
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.04 E-value=1.4 Score=42.75 Aligned_cols=90 Identities=19% Similarity=0.069 Sum_probs=56.2
Q ss_pred CceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccC-cChHHHHHHHHHHHhhcCCcEEecC--CCCCHHH
Q 010640 289 ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVG-RGQATAVYKVSSIAAQSGVPVIADG--GISNSGH 365 (505)
Q Consensus 289 ~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~~ipvIa~G--GI~~~~d 365 (505)
+-++..-++.+.-.|+.+.++|.|+|.++..+-+...+ ..+.+ ++.-+.+..++..++..++|||+|. |-.+..+
T Consensus 18 ~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG--~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~ 95 (295)
T 1s2w_A 18 KDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLG--VRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNN 95 (295)
T ss_dssp SSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC-----------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCC--CCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHH
Confidence 44666668899999999999999999987311111111 11111 2333345556666777789999996 5445544
Q ss_pred H----HHHHHhCCCEEEec
Q 010640 366 I----VKALVLGASTVMMG 380 (505)
Q Consensus 366 i----~kal~lGA~~V~~G 380 (505)
+ .+...+||++|.+=
T Consensus 96 v~~~v~~l~~aGaagv~iE 114 (295)
T 1s2w_A 96 ARRLVRKLEDRGVAGACLE 114 (295)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEEC
Confidence 4 34557999999763
No 447
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=89.03 E-value=2.8 Score=40.79 Aligned_cols=70 Identities=19% Similarity=0.216 Sum_probs=48.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 115 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMV 115 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 35667888899999999987766532 33445555555554 36899886432 355677888999999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 116 ~ 116 (307)
T 3s5o_A 116 V 116 (307)
T ss_dssp E
T ss_pred c
Confidence 4
No 448
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=89.01 E-value=2.7 Score=41.06 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=48.8
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCc---------------hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcC
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNS---------------SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAG 310 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~---------------~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aG 310 (505)
.+...++++.++++|+|+|-|......+ ..+...++.+++.+ ++||-+ .-..++.++.+.++|
T Consensus 48 ~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISI-DT~~~~Va~aAl~aG 125 (314)
T 3tr9_A 48 LNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISV-DTSRPRVMREAVNTG 125 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEE-ECSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEE-eCCCHHHHHHHHHcC
Confidence 3457788999999999999886522111 11455666777765 788866 556789999999999
Q ss_pred CCEE
Q 010640 311 VDGL 314 (505)
Q Consensus 311 ad~I 314 (505)
++.|
T Consensus 126 a~iI 129 (314)
T 3tr9_A 126 ADMI 129 (314)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 9987
No 449
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=89.01 E-value=5.6 Score=39.59 Aligned_cols=119 Identities=13% Similarity=0.183 Sum_probs=79.0
Q ss_pred CCccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEcc--cCCHHHHH-HHH----HcCCCEEEE
Q 010640 245 TRESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGGN--VVTMYQAQ-NLI----EAGVDGLRV 316 (505)
Q Consensus 245 ~~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g~--V~t~e~a~-~l~----~aGad~I~v 316 (505)
.+++..+.+..+.+.|.+.+-++..+. .....+.++.+|+.+ ++.++.+.. --+.+++. .+. +.|++.|.-
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iEq 219 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTN-VKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIEQ 219 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEEC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEC
Confidence 344566777778889999998876432 345678888888887 578887731 12445554 333 356665531
Q ss_pred ccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 317 GMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
. +. ......+. +..+..++||++++.+.+..++.+++..| +|+|++-.
T Consensus 220 P-----------~~---~~d~~~~~---~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 220 P-----------VI---ADDIDAMA---HIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp C-----------BC---TTCHHHHH---HHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred C-----------CC---cccHHHHH---HHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeec
Confidence 1 10 11233333 33445689999999999999999999887 89998853
No 450
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.98 E-value=0.7 Score=42.92 Aligned_cols=121 Identities=12% Similarity=0.085 Sum_probs=72.0
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCC----chhHHHHHHHHHHhCCCceEEEc-ccCCH-HHHHHHHHcCCCEEEEccCC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGN----SSFQIEMIKYAKKTYPELDVIGG-NVVTM-YQAQNLIEAGVDGLRVGMGS 320 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~----~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~-e~a~~l~~aGad~I~v~~g~ 320 (505)
....+.++.+.+.|++++.++...|+ .....+.++.+++.+ +.++.+. -+.++ +.++.+.++|+|++.+....
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSSHHHHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecC
Confidence 45677888889999999999742221 112257788888875 4444332 23344 36788889999999663210
Q ss_pred cceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEeccc
Q 010640 321 GSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSF 382 (505)
Q Consensus 321 g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~ 382 (505)
.. .+.. .++.+.+++.++.++.+=--.++.+..+++..|+|.|.+.+.
T Consensus 102 --------~~---~~~~---~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~ 149 (230)
T 1rpx_A 102 --------SS---TIHL---HRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSV 149 (230)
T ss_dssp --------TT---CSCH---HHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESS
T ss_pred --------cc---chhH---HHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEE
Confidence 00 0121 123344444556665542224666777777788998865543
No 451
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.96 E-value=1.7 Score=43.26 Aligned_cols=42 Identities=26% Similarity=0.264 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 276 QIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 276 ~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.++.+..+++..+++||+. |++.+.+++.+++.+|||++.++
T Consensus 264 a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 264 ALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp HHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEh
Confidence 4788888988866799876 89999999999999999999876
No 452
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=88.95 E-value=2.7 Score=41.70 Aligned_cols=70 Identities=24% Similarity=0.303 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 132 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVV 132 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 36678888999999999987766532 23344445444443 36899886432 345667788899999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 133 ~ 133 (343)
T 2v9d_A 133 I 133 (343)
T ss_dssp E
T ss_pred C
Confidence 4
No 453
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.92 E-value=3.4 Score=40.15 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=48.1
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 112 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSA 112 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEe
Confidence 35677888999999999987766532 23344444444433 36899986332 345667788899999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 113 ~ 113 (303)
T 2wkj_A 113 V 113 (303)
T ss_dssp E
T ss_pred c
Confidence 4
No 454
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=88.91 E-value=0.98 Score=42.29 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=49.7
Q ss_pred HHHHHHHHcCc-----cEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 251 ERLEHLVKAGV-----NVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 251 e~~~~lieaGa-----d~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
++++...+.+. .++-++. .|. ....+.++++++...++|+++ |++.+.++++.+.+ |+|.++++
T Consensus 149 e~~~~~a~~g~~~l~~~~Vyl~~-~G~-~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 149 ELAASYALVGEKLFNLPIIYIEY-SGT-YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-TTS-CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred HHHHHHHHhhhhhcCCCEEEEeC-CCC-cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 66666666665 7777766 453 345788888988865688877 58899999999999 99999886
No 455
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.88 E-value=3.6 Score=39.81 Aligned_cols=70 Identities=13% Similarity=0.174 Sum_probs=48.9
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 104 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILL 104 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 36678888999999999987766532 23445555555554 35789886332 355677788899999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 105 ~ 105 (294)
T 3b4u_A 105 A 105 (294)
T ss_dssp C
T ss_pred c
Confidence 4
No 456
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=88.73 E-value=3.2 Score=39.43 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcC-CcEEe
Q 010640 278 EMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSG-VPVIA 356 (505)
Q Consensus 278 ~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~-ipvIa 356 (505)
..++.+++. +-++..-++.+.-.|+.+.++|+|+|.++-..+....+..-+ ..++.-..+..++..++..+ .+|++
T Consensus 7 ~~lr~~k~~--g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt-~~vtldemi~h~~aV~r~~~~~~vva 83 (264)
T 1m3u_A 7 SLLQKYKQE--KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDST-LPVTVADIAYHTAAVRRGAPNCLLLA 83 (264)
T ss_dssp HHHHHHHHH--TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHC--CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCcCHHHHHHHHHHHHhhCCCCcEEE
Confidence 344455554 446656688899999999999999998852222211111111 11222334445555666555 56888
Q ss_pred cCC---CCCHHHHH----HHHHhCCCEEEe
Q 010640 357 DGG---ISNSGHIV----KALVLGASTVMM 379 (505)
Q Consensus 357 ~GG---I~~~~di~----kal~lGA~~V~~ 379 (505)
|=+ -.++.+.+ +.+..||++|.+
T Consensus 84 D~pfgsy~~~~~a~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 84 DLPFMAYATPEQAFENAATVMRAGANMVKI 113 (264)
T ss_dssp ECCTTSSSSHHHHHHHHHHHHHTTCSEEEC
T ss_pred ECCCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 844 44777776 577899999987
No 457
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.73 E-value=2.7 Score=40.89 Aligned_cols=98 Identities=14% Similarity=0.195 Sum_probs=59.4
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv 113 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLV 113 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 36677888999999999887665522 23344444444433 36899886432 345667788899999977
Q ss_pred ccCCcceeecccccccCcChHHH-HHHHHHHHhhcCCcEEe
Q 010640 317 GMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIA 356 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~-l~~v~~~~~~~~ipvIa 356 (505)
.. +.+. .|+-.. +.-....++..++||+.
T Consensus 114 ~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiil 143 (306)
T 1o5k_A 114 VT----PYYN-------KPTQEGLYQHYKYISERTDLGIVV 143 (306)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHTTCSSCEEE
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhCCCCEEE
Confidence 41 1111 122232 22334445556788876
No 458
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=88.72 E-value=5.7 Score=39.98 Aligned_cols=118 Identities=14% Similarity=0.180 Sum_probs=80.1
Q ss_pred CccHHHHHHHHHHc---CccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEE
Q 010640 246 RESDKERLEHLVKA---GVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLR 315 (505)
Q Consensus 246 ~~~~~e~~~~liea---Gad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~ 315 (505)
+++..+.++.+++. |...+-+..........++.++.+|+.+ +++++++- .--+.++| +.+.+.|++.|.
T Consensus 172 ~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE 251 (390)
T 3ugv_A 172 AEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIE 251 (390)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE
T ss_pred HHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 34556677777888 9999888665434456788889999987 57888873 12356655 344456777773
Q ss_pred EccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 316 VGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
-. +. ...+..+. +..+..++||.++..+.+..|+.+++..| +|.|++-
T Consensus 252 qP-----------~~---~~d~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik 300 (390)
T 3ugv_A 252 EP-----------VV---YDNFDGYA---QLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPD 300 (390)
T ss_dssp CC-----------SC---TTCHHHHH---HHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred CC-----------CC---cccHHHHH---HHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 21 10 01233333 33445689999999999999999999987 6777765
No 459
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=88.67 E-value=2.9 Score=40.90 Aligned_cols=113 Identities=17% Similarity=0.175 Sum_probs=65.6
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 124 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLL 124 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 46677888999999999887665532 23344444444433 36899986432 345667888899999977
Q ss_pred ccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-. .+.-....++..++||+.= -|+.=..+..+.|+
T Consensus 125 ~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 125 VT----PYYN-------KPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 41 1111 12222 2333344555567888764 24443344444444
No 460
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=88.65 E-value=1.8 Score=43.14 Aligned_cols=68 Identities=18% Similarity=0.251 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCccEEEEeCCCCC----------chhHHHHHHHHHHhC--CCceEEE-cccCCHHHHHHHHHcCCCEEEE
Q 010640 250 KERLEHLVKAGVNVVVLDSSQGN----------SSFQIEMIKYAKKTY--PELDVIG-GNVVTMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~~g~----------~~~~~~~i~~l~~~~--~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v 316 (505)
.+.++.+.++|+|+|.+....|. ....+..+..+.+.. .++|||+ |++.+..++.+++.+|||++.+
T Consensus 172 ~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~v 251 (351)
T 2c6q_A 172 GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVML 251 (351)
T ss_dssp HHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceec
Confidence 46778899999999988432221 111233333333221 1689887 8999999999999999999988
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
+
T Consensus 252 G 252 (351)
T 2c6q_A 252 G 252 (351)
T ss_dssp S
T ss_pred c
Confidence 6
No 461
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=88.59 E-value=3 Score=40.50 Aligned_cols=113 Identities=16% Similarity=0.205 Sum_probs=62.9
Q ss_pred HHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCce-EEEcccC---CH----------------HHHHHHHHcC
Q 010640 251 ERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELD-VIGGNVV---TM----------------YQAQNLIEAG 310 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~-Vi~g~V~---t~----------------e~a~~l~~aG 310 (505)
..++.+.+.|+|++.++...|.. .+...++.. +.+..-| +++=.+. +. +.|+.+.++|
T Consensus 94 ~av~~~a~lGaD~vTVHa~~G~~-~m~aa~e~a-~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G 171 (303)
T 3ru6_A 94 DACEEVSKLGVDMINIHASAGKI-AIQEVMTRL-SKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENG 171 (303)
T ss_dssp HHHHHHHTTTCSEEEEEGGGCHH-HHHHHHHHH-TTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCEEEEeccCCHH-HHHHHHHHH-HhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcC
Confidence 34566777899999998866631 222222222 2221212 2221221 11 2345566789
Q ss_pred CCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHH----------HHHHHHHhCCCEEEec
Q 010640 311 VDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSG----------HIVKALVLGASTVMMG 380 (505)
Q Consensus 311 ad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~----------di~kal~lGA~~V~~G 380 (505)
+++++.+ .. . +..+++.+. .-.++..+||+-.. .+..++.+|||.+.+|
T Consensus 172 ~dGvV~s--------~~--------E---~~~IR~~~~--~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvG 230 (303)
T 3ru6_A 172 LDGMVCS--------VF--------E---SKKIKEHTS--SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVG 230 (303)
T ss_dssp CSEEECC--------TT--------T---HHHHHHHSC--TTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEEC
T ss_pred CCEEEEC--------HH--------H---HHHHHHhCC--CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEC
Confidence 9887432 11 1 123334332 23577788998332 4667889999999999
Q ss_pred ccccCC
Q 010640 381 SFLAGS 386 (505)
Q Consensus 381 ~~f~~~ 386 (505)
+++..+
T Consensus 231 r~I~~a 236 (303)
T 3ru6_A 231 RPIYKN 236 (303)
T ss_dssp HHHHTS
T ss_pred hHHhCC
Confidence 987653
No 462
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=88.57 E-value=2.4 Score=39.80 Aligned_cols=113 Identities=18% Similarity=0.204 Sum_probs=64.6
Q ss_pred HHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHh--CC-Cce-EEEcccCCHHHHHHH-HHc----------------
Q 010640 251 ERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKT--YP-ELD-VIGGNVVTMYQAQNL-IEA---------------- 309 (505)
Q Consensus 251 e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~--~~-~~~-Vi~g~V~t~e~a~~l-~~a---------------- 309 (505)
..++.+.+.|+|++.+|...|.. .....++.+++. +. ..+ +++=+..|......+ .+.
T Consensus 73 ~~~~~~~~~Gad~vTvH~~~g~~-~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~ 151 (246)
T 2yyu_A 73 QAMKGLARVGADLVNVHAAGGRR-MMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAAL 151 (246)
T ss_dssp HHHHHHHHTTCSEEEEEGGGCHH-HHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEECCCCHH-HHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 36778889999999998876632 234566666662 21 123 332233222112222 222
Q ss_pred ----CCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCH-H---------HHHHHHHhCCC
Q 010640 310 ----GVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNS-G---------HIVKALVLGAS 375 (505)
Q Consensus 310 ----Gad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~-~---------di~kal~lGA~ 375 (505)
|.++++. +... +..+++.+. ..+++.+|||.-. . .+..++.+||+
T Consensus 152 ~~~~G~~g~V~------------------~~~e-i~~lr~~~~--~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad 210 (246)
T 2yyu_A 152 AKESGLDGVVC------------------SANE-AAFIKERCG--ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSD 210 (246)
T ss_dssp HHHHTCCEEEC------------------CHHH-HHHHHHHHC--TTSEEEECCCCCCC-------CCCCHHHHHHHTCS
T ss_pred HHHhCCCEEEe------------------CHHH-HHHHHHhcC--CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCC
Confidence 3332211 1222 445555443 2469999999843 2 37788899999
Q ss_pred EEEecccccC
Q 010640 376 TVMMGSFLAG 385 (505)
Q Consensus 376 ~V~~G~~f~~ 385 (505)
.+.+|+.+..
T Consensus 211 ~iVvGr~I~~ 220 (246)
T 2yyu_A 211 YIVIGRSLTR 220 (246)
T ss_dssp EEEECHHHHT
T ss_pred EEEECHhhcC
Confidence 9999998754
No 463
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.57 E-value=2.6 Score=41.27 Aligned_cols=70 Identities=17% Similarity=0.276 Sum_probs=47.9
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLV 112 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 46677889999999999987766532 23344444444433 36899986432 355678888899999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 113 ~ 113 (318)
T 3qfe_A 113 L 113 (318)
T ss_dssp C
T ss_pred e
Confidence 4
No 464
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=88.51 E-value=0.27 Score=46.50 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=32.4
Q ss_pred HHHHHHHHhhcCCcEEecCCCCCHH----------HHHHHHHhCCCEEEecccccC
Q 010640 340 VYKVSSIAAQSGVPVIADGGISNSG----------HIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 340 l~~v~~~~~~~~ipvIa~GGI~~~~----------di~kal~lGA~~V~~G~~f~~ 385 (505)
+..+++.+. +.+++.+|||.-.. .+.+++.+||+.+.+|+.+..
T Consensus 173 i~~lr~~~~--~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 226 (245)
T 1eix_A 173 AVRFKQVFG--QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQ 226 (245)
T ss_dssp HHHHHHHHC--SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHhcC--CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcC
Confidence 444555443 35899999998532 377788999999999998754
No 465
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.49 E-value=0.75 Score=42.94 Aligned_cols=122 Identities=11% Similarity=0.080 Sum_probs=76.8
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCc----hhHHHHHHHHHHhCCCce----EEEcccCCHHHHHHHHHcCCCEEEEcc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNS----SFQIEMIKYAKKTYPELD----VIGGNVVTMYQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~----~~~~~~i~~l~~~~~~~~----Vi~g~V~t~e~a~~l~~aGad~I~v~~ 318 (505)
....+.++.+.+.|+++++++...|+. ..-.+.++.+|+.+ +.+ +++-+. ......+.++|+|++.+..
T Consensus 17 ~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~dp--~~~i~~~~~aGadgv~vh~ 93 (230)
T 1tqj_A 17 SRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVEP--EKYVEDFAKAGADIISVHV 93 (230)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSSG--GGTHHHHHHHTCSEEEEEC
T ss_pred hHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccCH--HHHHHHHHHcCCCEEEECc
Confidence 346678888889999999998755431 12237788888765 333 444221 2246778889999997742
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccccC
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 385 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f~~ 385 (505)
... .. .. ...+.+.+++.++-+..+=.-.|+.+..+++..++|.|.+++.+-.
T Consensus 94 e~~-------~~----~~---~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg 146 (230)
T 1tqj_A 94 EHN-------AS----PH---LHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPG 146 (230)
T ss_dssp STT-------TC----TT---HHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC-
T ss_pred ccc-------cc----hh---HHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccc
Confidence 100 00 11 1123344445565555544557888888888889999999988743
No 466
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=88.48 E-value=2.1 Score=41.93 Aligned_cols=90 Identities=18% Similarity=0.151 Sum_probs=58.5
Q ss_pred CceEEEcccCCHHHHHHHHHcCCCEEEEccC-CcceeecccccccC-cChHHHHHHHHHHHhhc-CCcEEecC--CCCCH
Q 010640 289 ELDVIGGNVVTMYQAQNLIEAGVDGLRVGMG-SGSICTTQEVCAVG-RGQATAVYKVSSIAAQS-GVPVIADG--GISNS 363 (505)
Q Consensus 289 ~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g-~g~~~~~~~~~g~g-~p~~~~l~~v~~~~~~~-~ipvIa~G--GI~~~ 363 (505)
+-++..-++.+.-.|+.+.++|.|+|.++.. -+....+ ..+.+ ++.-+.+..++..++.. ++|||+|. |-.++
T Consensus 38 ~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG--~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~ 115 (318)
T 1zlp_A 38 HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLG--LPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGP 115 (318)
T ss_dssp SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHC--CCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcC--CCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCH
Confidence 3456566889999999999999999998731 1111111 11112 33334455566666667 79999996 54465
Q ss_pred HHH----HHHHHhCCCEEEec
Q 010640 364 GHI----VKALVLGASTVMMG 380 (505)
Q Consensus 364 ~di----~kal~lGA~~V~~G 380 (505)
.++ .+.+.+||++|.+=
T Consensus 116 ~~v~~tv~~l~~aGaagv~iE 136 (318)
T 1zlp_A 116 LNVQRFIRELISAGAKGVFLE 136 (318)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEC
Confidence 544 34567999999773
No 467
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=88.46 E-value=6.9 Score=39.05 Aligned_cols=118 Identities=8% Similarity=0.097 Sum_probs=78.9
Q ss_pred CccHHHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHHHH----cCCCEEEEc
Q 010640 246 RESDKERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNLIE----AGVDGLRVG 317 (505)
Q Consensus 246 ~~~~~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l~~----aGad~I~v~ 317 (505)
+++..+.++.+++. |...+-+..........++.++.+|+.+ ++.++++- .--+.++|..+.+ .|++.|.-
T Consensus 152 ~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq- 230 (372)
T 3tj4_A 152 LEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEE- 230 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEES-
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEEC-
Confidence 34456677778888 9999988765434456788899999988 67888773 2236666654433 44444421
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
.+. ...+..+ ++..+..++||.+++.+.+..|+.+++..| +|.|++-
T Consensus 231 ----------P~~---~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 231 ----------PLW---YDDVTSH---ARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp ----------CSC---TTCHHHH---HHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred ----------CCC---chhHHHH---HHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeC
Confidence 111 0123333 333445689999999999999999999988 6877764
No 468
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=88.43 E-value=1.1 Score=43.22 Aligned_cols=124 Identities=14% Similarity=0.063 Sum_probs=72.4
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCC--CceEE--Ec---ccC----CHHHHHHHHHcCCCEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYP--ELDVI--GG---NVV----TMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~--~~~Vi--~g---~V~----t~e~a~~l~~aGad~I~ 315 (505)
++..+.++.+.+.|+..+++.. .++ +..++.+. +++|. +| +.. -..+++.+++.|||.|+
T Consensus 74 ~dI~~lc~eA~~~g~aaVCV~P------~~V---~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEID 144 (288)
T 3oa3_A 74 SQIDVLCAEAKEYGFATVCVRP------DYV---SRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELD 144 (288)
T ss_dssp HHHHHHHHHHHHHTCSEEEECG------GGH---HHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCcEEEECH------HHH---HHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 3455667777778999999832 223 33334432 33432 22 111 23478889999999998
Q ss_pred EccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHH----HHHhCCCEEEeccccc
Q 010640 316 VGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVK----ALVLGASTVMMGSFLA 384 (505)
Q Consensus 316 v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~k----al~lGA~~V~~G~~f~ 384 (505)
+-+.-| ....+-.--...-+..++++|...-+.+|..-|..+..++.+ |..+|||+|--.|-|.
T Consensus 145 mVINig-----~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 145 MVMNYP-----WLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp EECCHH-----HHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred EEeehh-----hhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCC
Confidence 752111 111110011233444555555433367888888889988555 4568999999888774
No 469
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.39 E-value=2.9 Score=40.36 Aligned_cols=113 Identities=14% Similarity=0.188 Sum_probs=65.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 103 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIML 103 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEE
Confidence 36677888999999999987765532 23334444444433 36899986432 345667888899999977
Q ss_pred ccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-. .+......++..++||+.= .|+.=..+...-|+
T Consensus 104 ~~----P~y~-------~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 153 (292)
T 3daq_A 104 IT----PYYN-------KTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILS 153 (292)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 41 1111 12222 2223344455557888754 25544444444444
No 470
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=88.38 E-value=8.9 Score=36.53 Aligned_cols=67 Identities=7% Similarity=0.050 Sum_probs=52.1
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCC---chhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHc--CCCEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGN---SSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEA--GVDGLR 315 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~---~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~a--Gad~I~ 315 (505)
+...++++.+++.|+++|-|...... ...+...++.+++.+ ++|+.+ .-..++.++.+.++ |++.|.
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pisI-DT~~~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPCCL-DSTNPDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCEEE-ECSCHHHHHHHHHHCCSCCEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeEEE-eCCCHHHHHHHHHhCCCCCEEE
Confidence 45677888899999999998764322 245677788888776 788877 45688999999999 999885
No 471
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=88.36 E-value=1.9 Score=42.78 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCC-------CCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQ-------GNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~-------g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
+..+.++.|.+. +|++.+.... ......++.++.+++.+ ++||++ |.+.+.++|..+++.| +|+|.++
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVALG 307 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHHHHHH
Confidence 456677788888 9999884211 01123567788888887 788876 7788999999999998 9999765
No 472
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.22 E-value=3.3 Score=39.99 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=47.7
Q ss_pred cHHHHHHHHHH-cCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEE
Q 010640 248 SDKERLEHLVK-AGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 248 ~~~e~~~~lie-aGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~ 315 (505)
...+.++.+++ .|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavl 104 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLS 104 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 36678889999 999999887665532 23344444444433 36899986432 34566778889999997
Q ss_pred Ec
Q 010640 316 VG 317 (505)
Q Consensus 316 v~ 317 (505)
+.
T Consensus 105 v~ 106 (293)
T 1f6k_A 105 AV 106 (293)
T ss_dssp EE
T ss_pred EC
Confidence 74
No 473
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=88.21 E-value=6.2 Score=39.86 Aligned_cols=115 Identities=11% Similarity=0.174 Sum_probs=80.4
Q ss_pred ccHHHHHHHHHHc-CccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEc--ccCCHHHHHH----HHHcCCCEEEEccC
Q 010640 247 ESDKERLEHLVKA-GVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGG--NVVTMYQAQN----LIEAGVDGLRVGMG 319 (505)
Q Consensus 247 ~~~~e~~~~liea-Gad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g--~V~t~e~a~~----l~~aGad~I~v~~g 319 (505)
++..+.++.+++. |...+-+... ......++.++.+|+.++++++++- .--+.++|.. +.+.|++.|.-.
T Consensus 170 e~~~~~a~~~~~~~G~~~~K~KvG-~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iEqP-- 246 (398)
T 4dye_A 170 KAMAEHAVRVVEEGGFDAVKLKGT-TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYLEDP-- 246 (398)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECC-SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC--
T ss_pred HHHHHHHHHHHHhcCCCEEEEecC-CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEcCC--
Confidence 4456677778888 9999988664 3345668888999998888888883 2236666644 444677776311
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
.|.+..+ ++..+..++||.++.-+.+..|+.+++..| +|.+++--
T Consensus 247 --------------~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 292 (398)
T 4dye_A 247 --------------CVGIEGM---AQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDV 292 (398)
T ss_dssp --------------SSHHHHH---HHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECH
T ss_pred --------------CCCHHHH---HHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCc
Confidence 1233333 444455789999999999999999999987 78887653
No 474
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=88.19 E-value=5.1 Score=40.09 Aligned_cols=118 Identities=16% Similarity=0.201 Sum_probs=79.1
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc-cc-CCH----HHHHHHHHcCCCEEEEcc
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG-NV-VTM----YQAQNLIEAGVDGLRVGM 318 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g-~V-~t~----e~a~~l~~aGad~I~v~~ 318 (505)
++...+.++.+++.|...+-+..........++.++.+|+.+ +++++++- |- -+. +-++.+.+.|++.|.-.
T Consensus 147 ~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP- 225 (377)
T 3my9_A 147 FDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQP- 225 (377)
T ss_dssp HHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEECC-
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEECC-
Confidence 344456666777789999888665433356678888899887 57888773 11 122 34566667788877421
Q ss_pred CCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 319 GSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 319 g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
+. ......+. +..+..++||.+++-+.+..|+.+++..| +|.|++-
T Consensus 226 ----------~~---~~d~~~~~---~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k 272 (377)
T 3my9_A 226 ----------VP---RRHLDAMA---GFAAALDTPILADESCFDAVDLMEVVRRQAADAISVK 272 (377)
T ss_dssp ----------SC---TTCHHHHH---HHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECC
T ss_pred ----------CC---ccCHHHHH---HHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEec
Confidence 10 01233333 33445689999999999999999999887 7888764
No 475
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=88.11 E-value=3.4 Score=43.02 Aligned_cols=124 Identities=19% Similarity=0.248 Sum_probs=71.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHH---HHHHHcCCCEEEEccCCccee
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQA---QNLIEAGVDGLRVGMGSGSIC 324 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a---~~l~~aGad~I~v~~g~g~~~ 324 (505)
...+.+...++.|+|.+.+..-.. ........+.+.+.-..+.++++ +-+.+.. ....++ +|+|.++-|-
T Consensus 194 ~D~~DI~~~l~~g~d~I~lpfV~s-aeDv~~~~~~l~~~~~~i~Iiak-IEt~eav~nldeI~~~-~DgImvgrgD---- 266 (500)
T 1a3w_A 194 KDKEDLRFGVKNGVHMVFASFIRT-ANDVLTIREVLGEQGKDVKIIVK-IENQQGVNNFDEILKV-TDGVMVARGD---- 266 (500)
T ss_dssp HHHHHHHHHHHHTCSEEEECSCCS-HHHHHHHHHHHHHHHTTSEEEEE-ECSSHHHHSHHHHHHH-SSEEEECHHH----
T ss_pred hHHHHHHHHHHcCCCEEEECCCCC-HHHHHHHHHHHHhcCCCcEEEEE-ECChHHHHhHHHHHHh-CCEEEECchH----
Confidence 456667888899999998833211 22233333333322125677774 3333332 333334 7999886311
Q ss_pred ecccccccCcCh-HHHHHHHHHHHhhcCCcEEec---------CCCCCHH---HHHHHHHhCCCEEEecc
Q 010640 325 TTQEVCAVGRGQ-ATAVYKVSSIAAQSGVPVIAD---------GGISNSG---HIVKALVLGASTVMMGS 381 (505)
Q Consensus 325 ~~~~~~g~g~p~-~~~l~~v~~~~~~~~ipvIa~---------GGI~~~~---di~kal~lGA~~V~~G~ 381 (505)
-....|.+. ..+...+...|+..++|+|.+ ...-+.. |++.++..|+|+||++.
T Consensus 267 ---Lgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~ 333 (500)
T 1a3w_A 267 ---LGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSG 333 (500)
T ss_dssp ---HHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBST
T ss_pred ---hhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecc
Confidence 001112232 234455667777789999953 3433422 99999999999999974
No 476
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.06 E-value=2.6 Score=41.22 Aligned_cols=70 Identities=21% Similarity=0.203 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
.....++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 125 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMV 125 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 46677888999999999887665532 23344454444433 36899886332 355677888999999977
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 126 ~ 126 (315)
T 3na8_A 126 L 126 (315)
T ss_dssp C
T ss_pred C
Confidence 4
No 477
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=88.05 E-value=3.1 Score=40.71 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv 123 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLV 123 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 46677888999999999887766632 23344444444433 36899886332 345677888999999976
Q ss_pred c
Q 010640 317 G 317 (505)
Q Consensus 317 ~ 317 (505)
.
T Consensus 124 ~ 124 (315)
T 3si9_A 124 V 124 (315)
T ss_dssp E
T ss_pred C
Confidence 4
No 478
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=88.01 E-value=3 Score=41.19 Aligned_cols=92 Identities=23% Similarity=0.308 Sum_probs=67.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecc
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQ 327 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~ 327 (505)
...+++..|.++|+|++-+.... ....+.++.+++.. ++|+++---.++..|..+.++|+|.+.+- +|++.
T Consensus 47 atv~Qi~~l~~aG~diVRvavp~---~~~a~al~~I~~~~-~vPlvaDiHf~~~lal~a~e~G~dklRIN--PGNig--- 117 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVPH---KEDVEALEEIVKKS-PMPVIADIHFAPSYAFLSMEKGVHGIRIN--PGNIG--- 117 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS---HHHHHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHTTCSEEEEC--HHHHS---
T ss_pred HHHHHHHHHHHcCCCEEEeCCCC---hHHHHHHHHHHhcC-CCCEEEeCCCCHHHHHHHHHhCCCeEEEC--CcccC---
Confidence 46678889999999999875542 34567888888887 79998844489999999999999998763 22221
Q ss_pred cccccCcChHHHHHHHHHHHhhcCCcEEe
Q 010640 328 EVCAVGRGQATAVYKVSSIAAQSGVPVIA 356 (505)
Q Consensus 328 ~~~g~g~p~~~~l~~v~~~~~~~~ipvIa 356 (505)
.-+-+.++.+.+++.++||-.
T Consensus 118 --------~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 118 --------KEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp --------CHHHHHHHHHHHHHHTCEEEE
T ss_pred --------chhHHHHHHHHHHHcCCCEEE
Confidence 123345666777778888766
No 479
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=87.94 E-value=4.3 Score=41.49 Aligned_cols=116 Identities=19% Similarity=0.190 Sum_probs=79.9
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHHHHcCCCEEEEccC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNLIEAGVDGLRVGMG 319 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l~~aGad~I~v~~g 319 (505)
+...+.+..+.++|.+.+-+...+ .....++.++.+|+.+ ++.++.+. .--+.+++ +.+.+.|++.|.-..
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEqP~- 264 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD-AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEEPF- 264 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEECCS-
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC-
Confidence 556677788888999999887654 2345678888888876 57888773 12255554 556667888774211
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcC-CcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSG-VPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~-ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
. ......+ ++..+..+ +||++++.+.+..++.+++..| +|+|++-
T Consensus 265 ----------~---~~d~~~~---~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 265 ----------A---CNDFASY---REVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp ----------C---TTCHHHH---HHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred ----------C---ccCHHHH---HHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 0 0122223 34445567 9999999999999999999888 6777764
No 480
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.92 E-value=4.4 Score=38.67 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=60.6
Q ss_pred HHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcC-CcEEe
Q 010640 278 EMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSG-VPVIA 356 (505)
Q Consensus 278 ~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~-ipvIa 356 (505)
..++.+++. +-++..-++.+.-.|+.+.++|+|+|.++-..+....+..-+ ..++.-..+..++..++..+ .+|++
T Consensus 7 ~~lr~~k~~--g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vTldemi~h~~aV~r~~~~~~vva 83 (275)
T 1o66_A 7 NTLQKMKAA--GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKST-LPVSLRDMCYHTECVARGAKNAMIVS 83 (275)
T ss_dssp HHHHHHHHH--TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHhC--CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 344455554 446656688999999999999999997753222221111111 11233334445556666555 56888
Q ss_pred c---CCC-CCHHHHH----HHHHhCCCEEEe
Q 010640 357 D---GGI-SNSGHIV----KALVLGASTVMM 379 (505)
Q Consensus 357 ~---GGI-~~~~di~----kal~lGA~~V~~ 379 (505)
| |+- .++.+.+ +.+..||++|.+
T Consensus 84 D~pfgsy~~s~~~a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 84 DLPFGAYQQSKEQAFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp ECCTTSSSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ECCCCCccCCHHHHHHHHHHHHHcCCcEEEE
Confidence 8 444 3677666 577899999977
No 481
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=87.90 E-value=2.6 Score=40.82 Aligned_cols=113 Identities=15% Similarity=0.143 Sum_probs=65.7
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLC 101 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 36677888999999999886665522 23344444444433 25888886332 345667788899999977
Q ss_pred ccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-. .+.-....++..++|||.= .|+.=..+..+-|+
T Consensus 102 ~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (297)
T 2rfg_A 102 VA----GYYN-------RPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLA 151 (297)
T ss_dssp CC----CTTT-------CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 41 1111 12222 2333344455567888763 25543344444443
No 482
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=87.75 E-value=1.2 Score=44.22 Aligned_cols=41 Identities=24% Similarity=0.354 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCC-CceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 277 IEMIKYAKKTYP-ELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 277 ~~~i~~l~~~~~-~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
++.+..+++.++ ++||++ |+|.+.+++.+++.+|||++.++
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 678888888875 688876 89999999999999999999875
No 483
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=87.71 E-value=2.3 Score=39.52 Aligned_cols=56 Identities=20% Similarity=0.205 Sum_probs=44.2
Q ss_pred cCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcCCCEEEEc
Q 010640 259 AGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 259 aGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.|..++-++. .|.. ...+.++++++...++|+++ |++.++++++.+. .|||++++|
T Consensus 152 ~g~~~VYld~-sG~~-~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVG 208 (228)
T 3vzx_A 152 LQLPIFYLEY-SGVL-GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVG 208 (228)
T ss_dssp TTCSEEEEEC-TTSC-CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEEC
T ss_pred cCCCEEEecC-CCCc-CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEC
Confidence 4678887777 4433 25788899988864588877 5889999999988 799999986
No 484
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=87.55 E-value=2 Score=41.49 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=81.4
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCC-C--c--hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEccCC
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQG-N--S--SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVGMGS 320 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g-~--~--~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~~g~ 320 (505)
.++..+.++.|.+.|++.|++..... . + ....+.++.+++. +++++.+- +.+.+..+.+.++|++.|.+...+
T Consensus 25 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l-~~n~~~i~~a~~~G~~~V~i~~~~ 102 (295)
T 1ydn_A 25 TADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVL-VPNMKGYEAAAAAHADEIAVFISA 102 (295)
T ss_dssp HHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEE-CSSHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEE-eCCHHHHHHHHHCCCCEEEEEEec
Confidence 34567788889899999998864211 1 1 1355666666543 46776442 367899999999999998775311
Q ss_pred cceeecccccccCcC---hHHHHHHHHHHHhhcCCcEEe---------cCCCCCHHHHHHHH----HhCCCEEEecc
Q 010640 321 GSICTTQEVCAVGRG---QATAVYKVSSIAAQSGVPVIA---------DGGISNSGHIVKAL----VLGASTVMMGS 381 (505)
Q Consensus 321 g~~~~~~~~~g~g~p---~~~~l~~v~~~~~~~~ipvIa---------~GGI~~~~di~kal----~lGA~~V~~G~ 381 (505)
+. .........+ .+..+.++.+++++.+++|-+ +++-.++..+.+.. .+||+.+.++.
T Consensus 103 -S~--~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~D 176 (295)
T 1ydn_A 103 -SE--GFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGD 176 (295)
T ss_dssp -CH--HHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred -CH--HHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecC
Confidence 10 0111111222 234445556777777877741 13566777776655 69999998874
No 485
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=87.54 E-value=2.7 Score=40.60 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=65.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 102 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT 102 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 46678888999999999987766532 23344444444433 36899886432 244556667799999976
Q ss_pred ccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
.. +.+. .|+-. .+......++..++||+.= .|+.=..+..+-|+
T Consensus 103 ~~----P~y~-------~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 103 VT----PYYN-------RPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred CC----CCCC-------CCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHH
Confidence 41 1111 12223 2333345555567888763 25543444444443
No 486
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=87.43 E-value=8.8 Score=38.92 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=80.0
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCC------C------chhHHHHHHHHHHhC-CCceEEEc--ccCCHHHH----HHH
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQG------N------SSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQA----QNL 306 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g------~------~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a----~~l 306 (505)
+++..+.++.+.+.|...+-+..... . ....++.++.+|+.+ ++.++++- .--+.++| +.+
T Consensus 145 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L 224 (412)
T 4e4u_A 145 PDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRL 224 (412)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHh
Confidence 44566677788889999998854321 0 234577888888887 57888883 12256655 445
Q ss_pred HHcCCCEEEEccCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEecc
Q 010640 307 IEAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMGS 381 (505)
Q Consensus 307 ~~aGad~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G~ 381 (505)
.+.|++.|.-.. . ...+..+ ++..+..++||++++.+.+..++.+++..| +|.|++--
T Consensus 225 ~~~~i~~iEeP~-----------~---~~d~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 225 EKYDPLWFEEPV-----------P---PGQEEAI---AQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp GGGCCSEEECCS-----------C---SSCHHHH---HHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred hhcCCcEEECCC-----------C---hhhHHHH---HHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 567888884221 0 0123333 334445689999999999999999999988 78887753
No 487
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=87.43 E-value=4.1 Score=41.20 Aligned_cols=115 Identities=9% Similarity=0.064 Sum_probs=78.4
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhC-CCceEEEc-----ccCCHHHHHHHHHcCCCEEEEccC
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTY-PELDVIGG-----NVVTMYQAQNLIEAGVDGLRVGMG 319 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~-~~~~Vi~g-----~V~t~e~a~~l~~aGad~I~v~~g 319 (505)
++...+.++.+++.|...+-+... ....++.++.+|+.+ +++++++- +..+.+.++.+.+.|++.|.-.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~---~~~d~~~v~avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iEqP-- 238 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIK---PGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQP-- 238 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECB---TTBSHHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEESC--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeC---cchHHHHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEeCC--
Confidence 344566777788889888877653 234578888899987 67888873 2223455666667788877311
Q ss_pred CcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 320 SGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 320 ~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
+. ......+. +..+..++||.++.-+.+..|+.+++..| +|.|++-
T Consensus 239 ---------~~---~~d~~~~~---~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k 285 (400)
T 3mwc_A 239 ---------LH---YEALLDLK---ELGERIETPICLDESLISSRVAEFVAKLGISNIWNIK 285 (400)
T ss_dssp ---------SC---TTCHHHHH---HHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred ---------CC---hhhHHHHH---HHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEc
Confidence 10 01233333 33445679999999999999999999987 7888874
No 488
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=87.35 E-value=3.4 Score=36.08 Aligned_cols=68 Identities=12% Similarity=0.196 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCC-CchhHHHHHHHHHHhC-CCceEEEcccCCHHHHHHHHHcCCCEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQG-NSSFQIEMIKYAKKTY-PELDVIGGNVVTMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g-~~~~~~~~i~~l~~~~-~~~~Vi~g~V~t~e~a~~l~~aGad~I~ 315 (505)
...+.++.+.+.+++++.+....+ +...+.+.++.+++.- ++++|++|+....++...+.+.|+|++.
T Consensus 57 p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 57 TPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 356778888889999998866543 3356677778888864 3689999887766666678899999763
No 489
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=87.05 E-value=4.4 Score=42.09 Aligned_cols=123 Identities=22% Similarity=0.248 Sum_probs=71.3
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHH-HHHhCCCceEEEcccCCHHHHH---HHHHcCCCEEEEccCCcc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKY-AKKTYPELDVIGGNVVTMYQAQ---NLIEAGVDGLRVGMGSGS 322 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~-l~~~~~~~~Vi~g~V~t~e~a~---~l~~aGad~I~v~~g~g~ 322 (505)
+.+.+.+...++.|+|++.+ ++=.+...+..++. +.+.-.++.++++ +-+.+... ..+++ +|+|.++-|-=+
T Consensus 192 ekD~~dl~~~~~~~vD~i~~--sfVr~a~dv~~~r~~l~~~~~~i~IiaK-IE~~eav~nldeIl~~-sDgImVaRGDLg 267 (499)
T 3hqn_D 192 AKDRVDLQFGVEQGVDMIFA--SFIRSAEQVGDVRKALGPKGRDIMIICK-IENHQGVQNIDSIIEE-SDGIMVARGDLG 267 (499)
T ss_dssp HHHHHHHHHHHHTTCSEEEE--TTCCSHHHHHHHHHHHCGGGTTSEEEEE-ECSHHHHHTHHHHHHH-SSEEEEEHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEe--cCCCCHHHHHHHHHHHHhcCCCCeEEEE-ECCHHHHHhHHHHHHh-CCcEEEcccccc
Confidence 34666778888999999988 44333223333332 2222135677774 44544433 33334 799988632101
Q ss_pred eeecccccccCcCh-HHHHHHHHHHHhhcCCcEEecC---------CCCCH---HHHHHHHHhCCCEEEec
Q 010640 323 ICTTQEVCAVGRGQ-ATAVYKVSSIAAQSGVPVIADG---------GISNS---GHIVKALVLGASTVMMG 380 (505)
Q Consensus 323 ~~~~~~~~g~g~p~-~~~l~~v~~~~~~~~ipvIa~G---------GI~~~---~di~kal~lGA~~V~~G 380 (505)
... +.+. +..-..+...|+..++|+|.+- ..-|. .|++.|+.-|||+||+.
T Consensus 268 vEi-------~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLS 331 (499)
T 3hqn_D 268 VEI-------PAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLS 331 (499)
T ss_dssp HHS-------CHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred CcC-------CHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEe
Confidence 111 1111 2233445566777789999743 33333 58999999999999995
No 490
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=87.04 E-value=3.4 Score=38.38 Aligned_cols=69 Identities=14% Similarity=0.262 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcC-ccEEEEeC---CCC---CchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc
Q 010640 249 DKERLEHLVKAG-VNVVVLDS---SQG---NSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaG-ad~I~i~~---~~g---~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
..+.++.+++.| +|.+.+-+ .++ .....++.++++++..++.++.+-+-.+.+.+..+.++|+|.+++|
T Consensus 126 p~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 126 DVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAG 201 (227)
T ss_dssp CGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEES
T ss_pred cHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 345666777765 99985533 222 2245678888888886667776644456889999999999999886
No 491
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=86.92 E-value=3.4 Score=39.03 Aligned_cols=67 Identities=24% Similarity=0.333 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCccEEEEeC---CCCCch----hHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDS---SQGNSS----FQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~---~~g~~~----~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~ 317 (505)
..++++.+.+.+-.++-..+ ..|... ...+.++++|+.. +.|+++| ++.++++++.+.+ ++|+++||
T Consensus 153 ~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~-~ADGVIVG 227 (252)
T 3tha_A 153 PKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRK-VADGVIVG 227 (252)
T ss_dssp CHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTT-TSSEEEEC
T ss_pred cHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHh-cCCEEEEC
Confidence 35778877777655553332 234332 3466788888875 7899875 7889999998866 69999996
No 492
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=86.87 E-value=13 Score=35.65 Aligned_cols=67 Identities=10% Similarity=0.164 Sum_probs=50.2
Q ss_pred ccHHHHHHHHHHcCccEEEEeC-CC--CC-----c---hhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEE
Q 010640 247 ESDKERLEHLVKAGVNVVVLDS-SQ--GN-----S---SFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLR 315 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~-~~--g~-----~---~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~ 315 (505)
+...++++.+++.|+|+|-|.. +. |. . ..+...++.+++.+ ++||.+ .-..++.++.+.++|++.|.
T Consensus 38 ~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSI-DT~~~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 38 IDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISV-DTSKPEVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEE-ECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEE-eCCCHHHHHHHHHcCCCEEE
Confidence 4567788899999999999976 21 21 1 23566677777766 788866 55789999999999999884
No 493
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=86.87 E-value=3.8 Score=39.23 Aligned_cols=105 Identities=18% Similarity=0.255 Sum_probs=71.1
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCC---------CCchhHHHHHHHHHHhCCCceEEEcccCCHHHHHHHHHcCCCEEEEc
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQ---------GNSSFQIEMIKYAKKTYPELDVIGGNVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~---------g~~~~~~~~i~~l~~~~~~~~Vi~g~V~t~e~a~~l~~aGad~I~v~ 317 (505)
+...+.++.+.++|++++-+..-. |.....+..+++.++.+ ++|++. ++.+.+.+..+.+. +|++.++
T Consensus 52 e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~-Gl~~~t-e~~d~~~~~~l~~~-vd~~kIg 128 (276)
T 1vs1_A 52 EQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA-GLPVVT-EVLDPRHVETVSRY-ADMLQIG 128 (276)
T ss_dssp HHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-TCCEEE-ECCCGGGHHHHHHH-CSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc-CCcEEE-ecCCHHHHHHHHHh-CCeEEEC
Confidence 346667788888999998764311 11233455555555554 788866 89999999999999 9999886
Q ss_pred cCCcceeecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCC-CHHHHHHHHH
Q 010640 318 MGSGSICTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGIS-NSGHIVKALV 371 (505)
Q Consensus 318 ~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~-~~~di~kal~ 371 (505)
. +... ....+.++ ...+.||+.+=|.. +..++..|..
T Consensus 129 s--------~~~~-----n~~ll~~~----a~~~kPV~lk~G~~~t~~ei~~Ave 166 (276)
T 1vs1_A 129 A--------RNMQ-----NFPLLREV----GRSGKPVLLKRGFGNTVEELLAAAE 166 (276)
T ss_dssp G--------GGTT-----CHHHHHHH----HHHTCCEEEECCTTCCHHHHHHHHH
T ss_pred c--------cccc-----CHHHHHHH----HccCCeEEEcCCCCCCHHHHHHHHH
Confidence 2 1111 11223232 24689999999997 9999988875
No 494
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=86.83 E-value=1.2 Score=44.67 Aligned_cols=63 Identities=21% Similarity=0.209 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
..+.++.|.+.|+|++.+..... .. +.++.+++.+ ++||++ |.+ +.+.+..+++.| +|+|.++
T Consensus 252 ~~~la~~l~~~Gvd~i~v~~~~~-~~---~~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 252 FGHVARELGRRRIAFLFARESFG-GD---AIGQQLKAAF-GGPFIVNENF-TLDSAQAALDAGQADAVAWG 316 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS-TT---CCHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEECCCCC-CH---HHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 56677888889999999865431 11 4456777776 677766 666 999999999988 9999765
No 495
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=86.82 E-value=1.2 Score=44.63 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCccEEEEeCCCCCchhHHHHHHHHHHhCCCceEEE-cccCCHHHHHHHHHcC-CCEEEEc
Q 010640 249 DKERLEHLVKAGVNVVVLDSSQGNSSFQIEMIKYAKKTYPELDVIG-GNVVTMYQAQNLIEAG-VDGLRVG 317 (505)
Q Consensus 249 ~~e~~~~lieaGad~I~i~~~~g~~~~~~~~i~~l~~~~~~~~Vi~-g~V~t~e~a~~l~~aG-ad~I~v~ 317 (505)
..+.++.|.+.|+|++.++..... . +.++.+++.+ ++||++ |.+ +.+.+..+++.| +|+|.++
T Consensus 244 ~~~la~~l~~~Gvd~i~v~~~~~~-~---~~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 244 FTYVARELGKRGIAFICSREREAD-D---SIGPLIKEAF-GGPYIVNERF-DKASANAALASGKADAVAFG 308 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCT-T---CCHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHhCCCEEEECCCCCC-H---HHHHHHHHHC-CCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 456778888899999998654311 1 3456777776 678766 666 999999999988 9999765
No 496
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=86.81 E-value=2.4 Score=40.55 Aligned_cols=65 Identities=25% Similarity=0.265 Sum_probs=43.1
Q ss_pred HHHHHHHHHcCccEEEEeCC---CCC----chhHHHHHHHHHHhCCCceEEEc-ccCCHHHHHHHHHcCCCEEEEc
Q 010640 250 KERLEHLVKAGVNVVVLDSS---QGN----SSFQIEMIKYAKKTYPELDVIGG-NVVTMYQAQNLIEAGVDGLRVG 317 (505)
Q Consensus 250 ~e~~~~lieaGad~I~i~~~---~g~----~~~~~~~i~~l~~~~~~~~Vi~g-~V~t~e~a~~l~~aGad~I~v~ 317 (505)
.++++.+.+.+..++.+.+. .|. .....++++.+++.. ++||++| ++.++++++.+ .|+|+++||
T Consensus 157 ~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t~e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 157 DARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVGFGVSGKATAAQA--AVADGVVVG 229 (271)
T ss_dssp HHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC-CSCEEEESCCCSHHHHHHH--TTSSEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEEcCCCCHHHHHHh--cCCCEEEEC
Confidence 45666666655444433221 121 223357888888876 7899875 77789999997 999999996
No 497
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=86.80 E-value=5.9 Score=38.61 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=67.8
Q ss_pred CccHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCC-CE
Q 010640 246 RESDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGV-DG 313 (505)
Q Consensus 246 ~~~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGa-d~ 313 (505)
.+...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+ |+
T Consensus 27 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~da 106 (311)
T 3h5d_A 27 FDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAA 106 (311)
T ss_dssp TTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcE
Confidence 3457788899999999999987766632 33445555555554 36899986432 3455677888897 99
Q ss_pred EEEccCCcceeecccccccCcChHH-HHHHHHHHHhhcCCcEEec-----CCCCCHHHHHHHHH
Q 010640 314 LRVGMGSGSICTTQEVCAVGRGQAT-AVYKVSSIAAQSGVPVIAD-----GGISNSGHIVKALV 371 (505)
Q Consensus 314 I~v~~g~g~~~~~~~~~g~g~p~~~-~l~~v~~~~~~~~ipvIa~-----GGI~~~~di~kal~ 371 (505)
+.+.. +.+. .|+-. .+......++..++||+.= -|+.=..+....|+
T Consensus 107 vlv~~----P~y~-------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (311)
T 3h5d_A 107 GLAIV----PYYN-------KPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLA 159 (311)
T ss_dssp EEEEC----CCSS-------CCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EEEcC----CCCC-------CCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 97641 1111 12222 2333344455567888764 25443344444443
No 498
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=86.78 E-value=1.7 Score=43.92 Aligned_cols=118 Identities=10% Similarity=0.094 Sum_probs=76.1
Q ss_pred ccHHHHHHHHHHcCccEEEEeCCCC--------CchhHHHHHHHHHHhC-CCceEEEc--ccCCHHHHHHHHH----cCC
Q 010640 247 ESDKERLEHLVKAGVNVVVLDSSQG--------NSSFQIEMIKYAKKTY-PELDVIGG--NVVTMYQAQNLIE----AGV 311 (505)
Q Consensus 247 ~~~~e~~~~lieaGad~I~i~~~~g--------~~~~~~~~i~~l~~~~-~~~~Vi~g--~V~t~e~a~~l~~----aGa 311 (505)
+...+.+..+.++|.+.+-+....+ .....++.++.+|+.+ ++.++++- .--+.+++..+.+ .|+
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i 229 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNL 229 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 4456677778888999998876542 2245677888888876 57788772 2236666654443 344
Q ss_pred CEEEEccCCcceeecccccccCcChHHHHHHHHHHHhh--cCCcEEecCCCCCHHHHHHHHHhC-CCEEEec
Q 010640 312 DGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQ--SGVPVIADGGISNSGHIVKALVLG-ASTVMMG 380 (505)
Q Consensus 312 d~I~v~~g~g~~~~~~~~~g~g~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~~~di~kal~lG-A~~V~~G 380 (505)
+.+.- .+. ..+..+..+++...+ .++||++++ +.+..++.+++..| +|+|++-
T Consensus 230 ~~iE~-----------P~~----~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 230 YWLEE-----------AFH----EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp EEEEC-----------SSS----CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred CEEec-----------CCc----ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 44421 111 133444444332111 579999999 99999999999998 7888774
No 499
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=86.77 E-value=2.8 Score=40.45 Aligned_cols=112 Identities=18% Similarity=0.203 Sum_probs=65.8
Q ss_pred cHHHHHHHHHHcCccEEEEeCCCCCc-----hhHHHHHHHHHHhC-CCceEEEcccC-----CHHHHHHHHHcCCCEEEE
Q 010640 248 SDKERLEHLVKAGVNVVVLDSSQGNS-----SFQIEMIKYAKKTY-PELDVIGGNVV-----TMYQAQNLIEAGVDGLRV 316 (505)
Q Consensus 248 ~~~e~~~~lieaGad~I~i~~~~g~~-----~~~~~~i~~l~~~~-~~~~Vi~g~V~-----t~e~a~~l~~aGad~I~v 316 (505)
...+.++.+++.|++.+.+..+.|-. .+-.+.++...+.. .++||++|.-. +.+.++.+.++|+|++.+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLI 101 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEE
Confidence 46678888999999999886655422 23344444444433 36888886332 345677788899999977
Q ss_pred ccCCcceeecccccccCcChHHH-HHHHHHHHhhcCCcEEe------cCCCCCHHHHHHHH
Q 010640 317 GMGSGSICTTQEVCAVGRGQATA-VYKVSSIAAQSGVPVIA------DGGISNSGHIVKAL 370 (505)
Q Consensus 317 ~~g~g~~~~~~~~~g~g~p~~~~-l~~v~~~~~~~~ipvIa------~GGI~~~~di~kal 370 (505)
.. +.+. .|+-.. +......++..++|||. .|--.++..+.+..
T Consensus 102 ~~----P~y~-------~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (292)
T 2vc6_A 102 VS----PYYN-------KPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIF 151 (292)
T ss_dssp EC----CCSS-------CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cC----CCCC-------CCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 41 1111 122222 33334455556789887 33334555554443
No 500
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=86.76 E-value=19 Score=34.58 Aligned_cols=169 Identities=13% Similarity=0.101 Sum_probs=99.4
Q ss_pred HHHHHHHHHHCCCCeeEEeeC-CeeeeE--EeechhhhhhcCCCCCCCccCCCCcceEEEeec--CCccHHHHHHHHHHc
Q 010640 185 LGQIDEVLEKNDVDFVVLEKD-GERLDV--VTREDVERLKGYPNLGKGTVGPDGKWMVGAAIG--TRESDKERLEHLVKA 259 (505)
Q Consensus 185 l~~a~~~l~~~~i~~lpVvd~-g~l~Gi--It~~dil~~~~~~~~~~~~~d~~~~l~v~a~i~--~~~~~~e~~~~liea 259 (505)
+.+.++.+.+.+++.+.|.-- |+..-+ =.+..+++.... ...+++.+.+..+ ...+..+.++.+.+.
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~--------~~~gr~pviaGvg~~~t~~ai~la~~A~~~ 97 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIA--------AGIAPSRIVTGVLVDSIEDAADQSAEALNA 97 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH--------TTCCGGGEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH--------HhCCCCcEEEeCCCccHHHHHHHHHHHHhc
Confidence 556777888889988777644 543221 112223332211 1234444444443 345677788888889
Q ss_pred CccEEEEeCCCC----CchhHHHHHHHHHHhCC--CceEEEccc-------CCHHHHHHHH-HcC--CCEEEEccCCcce
Q 010640 260 GVNVVVLDSSQG----NSSFQIEMIKYAKKTYP--ELDVIGGNV-------VTMYQAQNLI-EAG--VDGLRVGMGSGSI 323 (505)
Q Consensus 260 Gad~I~i~~~~g----~~~~~~~~i~~l~~~~~--~~~Vi~g~V-------~t~e~a~~l~-~aG--ad~I~v~~g~g~~ 323 (505)
|+|.+.+-.+.- ...+..+..+.+.+..| ++|+++=++ .+.+...+|. +.. +-+|+-+.
T Consensus 98 Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiKds~----- 172 (294)
T 3b4u_A 98 GARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSS----- 172 (294)
T ss_dssp TCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEEECC-----
T ss_pred CCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEEECC-----
Confidence 999998754332 23566777777777765 789888332 4788888887 542 23333221
Q ss_pred eecccccccCcChHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHhCCCEEEecccc
Q 010640 324 CTTQEVCAVGRGQATAVYKVSSIAAQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFL 383 (505)
Q Consensus 324 ~~~~~~~g~g~p~~~~l~~v~~~~~~~~ipvIa~GGI~~~~di~kal~lGA~~V~~G~~f 383 (505)
+.+.-+.++.+.+. +..|+. | +..-+..++.+||+++.-|..-
T Consensus 173 -----------gd~~~~~~~~~~~~--~f~v~~--G--~d~~~l~~l~~G~~G~is~~~n 215 (294)
T 3b4u_A 173 -----------GNWSHTERLLKEHG--DLAILI--G--DERDLARGVRLGGQGAISGVAN 215 (294)
T ss_dssp -----------CCHHHHHHHHHHHT--TSEEEE--C--CHHHHHHHHHTTCCEEEESGGG
T ss_pred -----------CCHHHHHHHHHhCC--CeEEEE--c--cHHHHHHHHHCCCCEEEeCHHH
Confidence 12223333333333 455655 3 4556788999999999888653
Done!